Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0014516

Physical Location & Seq

Genomic Coordinates Reverse (-)

15405831 .. 15411453

Gene Structure 5623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00345110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGCTCCGTGGCCTAACCACCACTTGGCAGAAGTACCCACTTACTCTTCAACTCTATTACCGAATGAAGTCTCTGGGTGTGATGCCGGATAATTTCACCTACCCATTTCTCTTCATTGCGTGTTGGAATCTCTCGGAGCTTAATCATGGCTGTGCAGCACATTCGTCTGTGTTGAAGACTGGGTTGGATGGTGATGGTCATGTGACTCACTCTCTGATCACAATGTACTCGATGTGTGGGGAACTGGGTTATGCACGGAAGGTGTTCGATGAAATTCCCCAGAGAGATTCGGTGTCGTGGAACTCGATGATTTCCGGGTATACGAAGATGGGGCGTGCAGGGGATGCGGTGGGGTTGTTTGGGGAGATGAGGGAGGCTGGATTTGAGCCCAATGAGATGACTCTGGTGAGTGTTCTCGGGGCGTGCGGGGACCTTGGGGATTTGAGCTTGGGGAGGTGGGTGGAGGATTTTGTTGTTGACAAAAAGTTGCAGCTGAATTCTTATTTGGGGTCTGCTTTGATTGGTATGTATGGAAAGTGTGGTGATTTGTGTTCGGCAAGGAGGGTGTTTGACAGTATGAAGAAAAAGGATCGCGTCACTTGGAATGCCATGATTACTGGGTATGCTCAAAACGGAATGTCAGATGAAGCAATGGTGCTTTTTGATGGCATGAAAGAAGCAGGTGTTATCCCTGATAAAATCACACTGGTTGGAATGTTGTCTGCATGTGCTGCAATTGGTGCCCTAGATTTGGGGAGATGGATTGACAAATATGCATCTGAAAGGGACTTCCAACATGACATTTATGTTGGTACTGCATTAGTTGATATGTATGCTAAGTGTGGCAGCTTAGCCAATGCTCTAAGAGTTTTTGAAGACATGCCCCAGAAAAATGAGGTTTCTTGGAATGCCATGATATCTGCCCTTGCTTTCCATGGGAGAGCCCATGAAGCAATATCCCTATTTGAGCGTATGACAGAAGAAGTTGGGGCTGCTCGGCCAAATGACATCACGTTTGTCGCAGTACTTTCTGCGTGTGTTCATGTTGGACTAGTCGATGAGGGTCGTCGATTGTTTGATTTAATGAGCTCATCATTTGGGCTGGTTCCAAAAGTAGAGCATTATTCTTGCATGGTTGACCTTTTGTCACGTGCAGGACGCGTACATGAAGCTTGGGATTTCATCAAGAAAATGCCTGAAAAACCAGATGAAGTTACACTGGGAGCGTTACTTGGTGCCTGTCGGAAATGTGGAAATGTAGATATCACTGAACAGGTAGTGCAGCTGCTTCTAGAATTGGAGCCTTCAAACTCTGGAAACTATGTTATCTCATCAAAGATCTATGCGGGCTTAAAAATGTGGGATGACTCAGCAAGGATGAGAGTGTTGATGAGACAAAGGGGTGTCAGCAAGACTCCTGGCTGTAGCTGGATTGAGAAAGAGAATCAATTTCATGAGTTTCACGCCGGTGATAATTTAGAAGAGATCTCTCAAGTACTTAAAGTATTATATGAGGATTTGAAGGATGAAGGTTACATACCAAACATTAATGCTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

519

Amino Acids

57.68

Weight (kDa)

5.41

Isoelectric Point (pI)

35.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	96 - 142	4.4e-11	PPR repeat family
PPR	PF01535	98 - 128	4.6e-09	PPR repeat
PPR_2	PF13041	197 - 244	2e-12	PPR repeat family
PPR_1	PF12854	197 - 225	1.2e-06	PPR repeat
PPR	PF01535	199 - 229	3.5e-10	PPR repeat
PPR_2	PF13041	298 - 347	3.9e-08	PPR repeat family
PPR	PF01535	300 - 327	2.7e-07	PPR repeat
E_motif	PF20431	419 - 479	8.3e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34400
fragaria_vesca	FvH4_4g07550 FvH4_4g07550
malus_domestica	MD13G1244600.v1.1
prunus_persica	Prupe.1G079000_v2.0.a1
pyrus_communis	pycom13g21590
rosa_chinensis	RchiOBHm_Chr4g0400141
rosa_laevigata	RLG00000009209
rosa_multiflora	Rmu_sc0000037.1_g000017 Rmu_sc0023757.1_g000001
rosa_roxburghii	Rroxscaffold_5G00345110
rosa_rugosa	Rorug04G0022600 Rorug04G0022600 Rorug04G0022700
rosa_samantha	Rh4BG096600 Rh4CG107900
rosa_wichuraiana	Rw4G008190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	671
Acc36I	ACCTGC	1 cut(s)	671
AccB1I	GGYRCC	2 cut(s)	740, 1235
AccB7I	CCANNNNNTGG	1 cut(s)	24
AccI	GTMKAC	1 cut(s)	320
AccII	CGCG	2 cut(s)	594, 1161
AciI	CCGC	3 cut(s)	347, 426, 1346
AclWI	GGATC	1 cut(s)	597
AcoI	YGGCCR	1 cut(s)	998
AcsI	RAATTY	2 cut(s)	273, 496
AcvI	CACGTG	1 cut(s)	1151
AfaI	GTAC	6 cut(s)	35, 227, 814, 1026, 1164, 1497
AfiI	CCNNNNNNNGG	2 cut(s)	24, 751
AflIII	ACRYGT	1 cut(s)	1159
AgsI	TTSAA	5 cut(s)	50, 175, 875, 1308, 1522
AhdI	GACNNNNNGTC	1 cut(s)	1144
AhlI	ACTAGT	1 cut(s)	1051
AjnI	CCWGG	1 cut(s)	1417
AjuI	GAANNNNNNNTTGG	4 cut(s)	167, 199, 488, 520
AleI	CACNNNNGTG	1 cut(s)	1467
AluBI	AGCT	8 cut(s)	139, 447, 493, 849, 1089, 1172, 1285, 1428
AluI	AGCT	8 cut(s)	139, 447, 493, 849, 1089, 1172, 1285, 1428
Alw21I	GWGCWC	1 cut(s)	1091
Alw26I	GTCTC	2 cut(s)	75, 1387
AlwI	GGATC	1 cut(s)	597
Ama87I	CYCGRG	1 cut(s)	416
AoxI	GGCC	2 cut(s)	10, 998
ApeKI	GCWGC	7 cut(s)	155, 490, 731, 846, 992, 1282, 1285
ApoI	RAATTY	2 cut(s)	273, 496
ArsI	GACNNNNNNTTYG	2 cut(s)	998, 1030
AseI	ATTAAT	1 cut(s)	1548
Asp700I	GAANNNNTTC	1 cut(s)	263
AspS9I	GGNCC	1 cut(s)	430
AsuC2I	CCSGG	1 cut(s)	316
AsuHPI	GGTGA	5 cut(s)	88, 203, 418, 554, 1481
AvaI	CYCGRG	1 cut(s)	416
AvaII	GGWCC	1 cut(s)	430
BaeGI	GKGCMC	1 cut(s)	745
BanI	GGYRCC	2 cut(s)	740, 1235
BanII	GRGCYC	3 cut(s)	390, 946, 1091
BarI	GAAGNNNNNNTAC	2 cut(s)	1521, 1553
BbrPI	CACGTG	1 cut(s)	1151
BbsI	GAAGAC	2 cut(s)	182, 882
Bbv12I	GWGCWC	1 cut(s)	1091
BbvI	GCAGC	7 cut(s)	167, 502, 718, 858, 979, 1272, 1294
BccI	CCATC	5 cut(s)	182, 188, 322, 659, 753
BcgI	CGANNNNNNTGC	2 cut(s)	144, 178
BciT130I	CCWGG	1 cut(s)	1419
BclI	TGATCA	1 cut(s)	216
BcnI	CCSGG	1 cut(s)	316
BcoDI	GTCTC	2 cut(s)	75, 1387
BcuI	ACTAGT	1 cut(s)	1051
BfaI	CTAG	3 cut(s)	746, 1052, 1292
BfmI	CTRYAG	1 cut(s)	1423
BfuAI	ACCTGC	1 cut(s)	671
BglII	AGATCT	2 cut(s)	1338, 1485
BisI	GCNGC	7 cut(s)	156, 491, 732, 847, 993, 1283, 1286
BlpI	GCTNAGC	1 cut(s)	850
BlsI	GCNGC	7 cut(s)	157, 492, 733, 848, 994, 1284, 1287
BmcAI	AGTACT	2 cut(s)	1026, 1497
Bme1390I	CCNGG	2 cut(s)	316, 1419
Bme18I	GGWCC	1 cut(s)	430
BmeRI	GACNNNNNGTC	1 cut(s)	1144
BmeT110I	CYCGRG	1 cut(s)	416
BmgT120I	GGNCC	1 cut(s)	430
BmiI	GGNNCC	5 cut(s)	431, 742, 1107, 1237, 1302
BmrFI	CCNGG	2 cut(s)	316, 1419
BmrI	ACTGGG	4 cut(s)	189, 254, 627, 1229
BmsI	GCATC	3 cut(s)	72, 334, 785
BmuI	ACTGGG	4 cut(s)	189, 254, 627, 1229
BpiI	GAAGAC	2 cut(s)	182, 882
Bpu1102I	GCTNAGC	1 cut(s)	850
BpuEI	CTTGAG	1 cut(s)	1476
BpuMI	CCSGG	1 cut(s)	316
BsaAI	YACGTR	1 cut(s)	1151
BsaJI	CCNNGG	3 cut(s)	7, 433, 934
Bsc4I	CCNNNNNNNGG	2 cut(s)	24, 751
Bse118I	RCCGGY	1 cut(s)	1466
Bse1I	ACTGG	5 cut(s)	184, 249, 622, 711, 1224
Bse3DI	GCAATG	2 cut(s)	114, 657
BseBI	CCWGG	1 cut(s)	1419
BseDI	CCNNGG	3 cut(s)	7, 433, 934
BseGI	GGATG	5 cut(s)	193, 349, 1369, 1383, 1531
BseLI	CCNNNNNNNGG	2 cut(s)	24, 751
BseMI	GCAATG	2 cut(s)	114, 657
BseMII	CTCAG	1 cut(s)	1383
BseNI	ACTGG	5 cut(s)	184, 249, 622, 711, 1224
BseSI	GKGCMC	1 cut(s)	745
BseXI	GCAGC	7 cut(s)	167, 502, 718, 858, 979, 1272, 1294
BsgI	GTGCAG	4 cut(s)	174, 357, 1173, 1301
Bsh1236I	CGCG	2 cut(s)	594, 1161
BshFI	GGCC	2 cut(s)	12, 1000
BshNI	GGYRCC	2 cut(s)	740, 1235
BsiHKAI	GWGCWC	1 cut(s)	1091
BsiHKCI	CYCGRG	1 cut(s)	416
BsiSI	CCGG	3 cut(s)	86, 315, 1467
BslFI	GGGAC	2 cut(s)	443, 800
BslI	CCNNNNNNNGG	2 cut(s)	24, 751
BsmAI	GTCTC	2 cut(s)	75, 1387
BsmFI	GGGAC	2 cut(s)	443, 800
BsmI	GAATGC	2 cut(s)	610, 913
BsnI	GGCC	2 cut(s)	12, 1000
BsoBI	CYCGRG	1 cut(s)	416
Bsp1286I	GDGCHC	4 cut(s)	390, 745, 946, 1091
Bsp143I	GATC	4 cut(s)	216, 589, 1338, 1485
Bsp1720I	GCTNAGC	1 cut(s)	850
Bsp19I	CCATGG	1 cut(s)	934
BspACI	CCGC	3 cut(s)	347, 426, 1346
BspANI	GGCC	2 cut(s)	12, 1000
BspCNI	CTCAG	1 cut(s)	1382
BspFNI	CGCG	2 cut(s)	594, 1161
BspHI	TCATGA	1 cut(s)	1453
BspLI	GGNNCC	5 cut(s)	431, 742, 1107, 1237, 1302
BspMI	ACCTGC	1 cut(s)	671
BspPI	GGATC	1 cut(s)	597
BspT107I	GGYRCC	2 cut(s)	740, 1235
BsrDI	GCAATG	2 cut(s)	114, 657
BsrFI	RCCGGY	1 cut(s)	1466
BsrI	ACTGG	5 cut(s)	184, 249, 622, 711, 1224
BssAI	RCCGGY	1 cut(s)	1466
BssECI	CCNNGG	3 cut(s)	7, 433, 934
BssMI	GATC	4 cut(s)	216, 589, 1338, 1485
BssNAI	GTATAC	1 cut(s)	321
BssT1I	CCWWGG	2 cut(s)	433, 934
Bst1107I	GTATAC	1 cut(s)	321
Bst2UI	CCWGG	1 cut(s)	1419
Bst4CI	ACNGT	1 cut(s)	575
Bst6I	CTCTTC	3 cut(s)	51, 116, 1476
BstAPI	GCANNNNNTGC	3 cut(s)	344, 731, 740
BstBAI	YACGTR	1 cut(s)	1151
BstC8I	GCNNGC	3 cut(s)	336, 424, 1348
BstDEI	CTNAG	4 cut(s)	837, 850, 863, 1369
BstDSI	CCRYGG	2 cut(s)	7, 934
BstF5I	GGATG	5 cut(s)	193, 349, 1369, 1383, 1531
BstFNI	CGCG	2 cut(s)	594, 1161
BstKTI	GATC	4 cut(s)	219, 592, 1341, 1488
BstMAI	GTCTC	2 cut(s)	75, 1387
BstMBI	GATC	4 cut(s)	216, 589, 1338, 1485
BstMWI	GCNNNNNNNGC	4 cut(s)	344, 731, 740, 950
BstNI	CCWGG	1 cut(s)	1419
BstNSI	RCATGY	2 cut(s)	729, 883
BstSCI	CCNGG	2 cut(s)	314, 1417
BstSFI	CTRYAG	1 cut(s)	1423
BstSLI	GKGCMC	1 cut(s)	745
BstUI	CGCG	2 cut(s)	594, 1161
BstV1I	GCAGC	7 cut(s)	167, 502, 718, 858, 979, 1272, 1294
BstV2I	GAAGAC	2 cut(s)	182, 882
BstX2I	RGATCY	2 cut(s)	1338, 1485
BstYI	RGATCY	2 cut(s)	1338, 1485
BstZ17I	GTATAC	1 cut(s)	321
BsuRI	GGCC	2 cut(s)	12, 1000
BtgI	CCRYGG	2 cut(s)	7, 934
BtsCI	GGATG	5 cut(s)	193, 349, 1369, 1383, 1531
BtsIMutI	CAGTG	3 cut(s)	704, 1217, 1266
BveI	ACCTGC	1 cut(s)	671
Cac8I	GCNNGC	3 cut(s)	336, 424, 1348
CciI	TCATGA	1 cut(s)	1453
Cfr10I	RCCGGY	1 cut(s)	1466
Cfr13I	GGNCC	1 cut(s)	430
CseI	GACGC	2 cut(s)	583, 1167
Csp6I	GTAC	6 cut(s)	34, 226, 813, 1025, 1163, 1496
CviQI	GTAC	6 cut(s)	34, 226, 813, 1025, 1163, 1496
DdeI	CTNAG	4 cut(s)	837, 850, 863, 1369
DpnI	GATC	4 cut(s)	218, 591, 1340, 1487
DpnII	GATC	4 cut(s)	216, 589, 1338, 1485
DriI	GACNNNNNGTC	1 cut(s)	1144
EaeI	YGGCCR	1 cut(s)	998
Eam1104I	CTCTTC	3 cut(s)	51, 116, 1476
Eam1105I	GACNNNNNGTC	1 cut(s)	1144
EarI	CTCTTC	3 cut(s)	51, 116, 1476
Ecl136II	GAGCTC	1 cut(s)	1089
Eco130I	CCWWGG	2 cut(s)	433, 934
Eco24I	GRGCYC	3 cut(s)	390, 946, 1091
Eco32I	GATATC	2 cut(s)	918, 1264
Eco47I	GGWCC	1 cut(s)	430
Eco53kI	GAGCTC	1 cut(s)	1089
Eco72I	CACGTG	1 cut(s)	1151
Eco88I	CYCGRG	1 cut(s)	416
EcoICRI	GAGCTC	1 cut(s)	1089
EcoO109I	RGGNCCY	1 cut(s)	430
EcoRI	GAATTC	1 cut(s)	496
EcoRII	CCWGG	1 cut(s)	1417
EcoRV	GATATC	2 cut(s)	918, 1264
EcoT14I	CCWWGG	2 cut(s)	433, 934
EcoT22I	ATGCAT	1 cut(s)	778
EcoT38I	GRGCYC	3 cut(s)	390, 946, 1091
ErhI	CCWWGG	2 cut(s)	433, 934
FaqI	GGGAC	2 cut(s)	443, 800
FauI	CCCGC	2 cut(s)	419, 1339
FbaI	TGATCA	1 cut(s)	216
FblI	GTMKAC	1 cut(s)	320
Fnu4HI	GCNGC	7 cut(s)	156, 491, 732, 847, 993, 1283, 1286
FokI	GGATG	5 cut(s)	200, 356, 1376, 1390, 1538
FriOI	GRGCYC	3 cut(s)	390, 946, 1091
Fsp4HI	GCNGC	7 cut(s)	156, 491, 732, 847, 993, 1283, 1286
FspBI	CTAG	3 cut(s)	746, 1052, 1292
GluI	GCNGC	7 cut(s)	156, 491, 732, 847, 993, 1283, 1286
HaeIII	GGCC	2 cut(s)	12, 1000
HapII	CCGG	3 cut(s)	86, 315, 1467
HgaI	GACGC	2 cut(s)	583, 1167
HincII	GTYRAC	2 cut(s)	478, 1138
HindII	GTYRAC	2 cut(s)	478, 1138
HindIII	AAGCTT	1 cut(s)	1170
HinfI	GANTC	7 cut(s)	127, 205, 287, 400, 1367, 1414, 1444
HpaII	CCGG	3 cut(s)	86, 315, 1467
HphI	GGTGA	5 cut(s)	88, 203, 418, 554, 1481
Hpy166II	GTNNAC	3 cut(s)	321, 478, 1138
Hpy188I	TCNGA	5 cut(s)	136, 216, 643, 781, 1245
Hpy188III	TCNNGA	4 cut(s)	1186, 1292, 1314, 1454
Hpy8I	GTNNAC	3 cut(s)	321, 478, 1138
Hpy99I	CGWCG	1 cut(s)	1071
HpyAV	CCTTC	4 cut(s)	253, 1314, 1516, 1523
HpyCH4III	ACNGT	1 cut(s)	575
HpyCH4IV	ACGT	2 cut(s)	1013, 1150
HpyF10VI	GCNNNNNNNGC	4 cut(s)	344, 731, 740, 950
HpyF3I	CTNAG	4 cut(s)	837, 850, 863, 1369
HpySE526I	ACGT	2 cut(s)	1013, 1150
Ksp22I	TGATCA	1 cut(s)	216
Kzo9I	GATC	4 cut(s)	216, 589, 1338, 1485
LmnI	GCTCC	4 cut(s)	9, 136, 1223, 1300
Lsp1109I	GCAGC	7 cut(s)	167, 502, 718, 858, 979, 1272, 1294
LweI	GCATC	3 cut(s)	72, 334, 785
MaeI	CTAG	3 cut(s)	746, 1052, 1292
MaeII	ACGT	2 cut(s)	1013, 1150
MaeIII	GTNAC	6 cut(s)	202, 595, 1146, 1213, 1227, 1532
MalI	GATC	4 cut(s)	218, 591, 1340, 1487
MboI	GATC	4 cut(s)	216, 589, 1338, 1485
MboII	GAAGA	8 cut(s)	38, 103, 187, 337, 592, 887, 992, 1493
MfeI	CAATTG	1 cut(s)	735
MflI	RGATCY	2 cut(s)	1338, 1485
MhlI	GDGCHC	4 cut(s)	390, 745, 946, 1091
MluCI	AATT	7 cut(s)	91, 273, 496, 735, 1295, 1448, 1474
MluI	ACGCGT	1 cut(s)	1159
MlyI	GAGTC	4 cut(s)	199, 394, 1361, 1408
MmeI	TCCRAC	6 cut(s)	104, 165, 691, 817, 1027, 1223
MnlI	CCTC	8 cut(s)	363, 367, 447, 457, 555, 889, 1054, 1507
Mph1103I	ATGCAT	1 cut(s)	778
MroXI	GAANNNNTTC	1 cut(s)	263
MseI	TTAA	5 cut(s)	141, 1082, 1352, 1500, 1548
MslI	CAYNNNNRTG	2 cut(s)	150, 1467
MspA1I	CMGCKG	2 cut(s)	493, 1285
MspI	CCGG	3 cut(s)	86, 315, 1467
MspR9I	CCNGG	2 cut(s)	316, 1419
MunI	CAATTG	1 cut(s)	735
Mva1269I	GAATGC	2 cut(s)	610, 913
MvaI	CCWGG	1 cut(s)	1419
MvnI	CGCG	2 cut(s)	594, 1161
MwoI	GCNNNNNNNGC	4 cut(s)	344, 731, 740, 950
NciI	CCSGG	1 cut(s)	316
NcoI	CCATGG	1 cut(s)	934
NdeII	GATC	4 cut(s)	216, 589, 1338, 1485
NlaIV	GGNNCC	5 cut(s)	431, 742, 1107, 1237, 1302
NmeAIII	GCCGAG	1 cut(s)	976
NmuCI	GTSAC	3 cut(s)	202, 595, 1146
NsiI	ATGCAT	1 cut(s)	778
NspI	RCATGY	2 cut(s)	729, 883
OliI	CACNNNNGTG	1 cut(s)	1467
PagI	TCATGA	1 cut(s)	1453
PaqCI	CACCTGC	1 cut(s)	671
PcsI	WCGNNNNNNNCGW	1 cut(s)	302
PctI	GAATGC	2 cut(s)	610, 913
PdmI	GAANNNNTTC	1 cut(s)	263
PfeI	GAWTC	3 cut(s)	127, 287, 1444
PflMI	CCANNNNNTGG	1 cut(s)	24
PkrI	GCNGC	7 cut(s)	157, 492, 733, 848, 994, 1284, 1287
PleI	GAGTC	4 cut(s)	199, 394, 1361, 1408
PmaCI	CACGTG	1 cut(s)	1151
PmlI	CACGTG	1 cut(s)	1151
PpsI	GAGTC	4 cut(s)	199, 394, 1361, 1408
Ppu21I	YACGTR	1 cut(s)	1151
PpuMI	RGGWCCY	1 cut(s)	430
PshBI	ATTAAT	1 cut(s)	1548
Psp124BI	GAGCTC	1 cut(s)	1091
Psp5II	RGGWCCY	1 cut(s)	430
Psp6I	CCWGG	1 cut(s)	1417
PspCI	CACGTG	1 cut(s)	1151
PspGI	CCWGG	1 cut(s)	1417
PspN4I	GGNNCC	5 cut(s)	431, 742, 1107, 1237, 1302
PspPI	GGNCC	1 cut(s)	430
PspPPI	RGGWCCY	1 cut(s)	430
PsuI	RGATCY	2 cut(s)	1338, 1485
PvuII	CAGCTG	2 cut(s)	493, 1285
RsaI	GTAC	6 cut(s)	35, 227, 814, 1026, 1164, 1497
RsaNI	GTAC	6 cut(s)	34, 226, 813, 1025, 1163, 1496
RseI	CAYNNNNRTG	2 cut(s)	150, 1467
SacI	GAGCTC	1 cut(s)	1091
SaqAI	TTAA	5 cut(s)	141, 1082, 1352, 1500, 1548
SatI	GCNGC	7 cut(s)	156, 491, 732, 847, 993, 1283, 1286
Sau3AI	GATC	4 cut(s)	216, 589, 1338, 1485
Sau96I	GGNCC	1 cut(s)	430
ScaI	AGTACT	2 cut(s)	1026, 1497
SchI	GAGTC	4 cut(s)	199, 394, 1361, 1408
ScrFI	CCNGG	2 cut(s)	316, 1419
SduI	GDGCHC	4 cut(s)	390, 745, 946, 1091
SfaNI	GCATC	3 cut(s)	72, 334, 785
SfcI	CTRYAG	1 cut(s)	1423
SgrAI	CRCCGGYG	1 cut(s)	1466
SinI	GGWCC	1 cut(s)	430
SmiMI	CAYNNNNRTG	2 cut(s)	150, 1467
SmlI	CTYRAG	1 cut(s)	1491
SmoI	CTYRAG	1 cut(s)	1491
SpeI	ACTAGT	1 cut(s)	1051
Sse9I	AATT	7 cut(s)	91, 273, 496, 735, 1295, 1448, 1474
SsiI	CCGC	3 cut(s)	347, 426, 1346
SspMI	CTAG	3 cut(s)	746, 1052, 1292
SstI	GAGCTC	1 cut(s)	1091
StyD4I	CCNGG	2 cut(s)	314, 1417
StyI	CCWWGG	2 cut(s)	433, 934
TaaI	ACNGT	1 cut(s)	575
TaiI	ACGT	2 cut(s)	1016, 1153
TaqI	TCGA	5 cut(s)	230, 267, 305, 1056, 1069
TasI	AATT	7 cut(s)	91, 273, 496, 735, 1295, 1448, 1474
TatI	WGTACW	3 cut(s)	225, 1024, 1495
TfiI	GAWTC	3 cut(s)	127, 287, 1444
Tru1I	TTAA	5 cut(s)	141, 1082, 1352, 1500, 1548
Tru9I	TTAA	5 cut(s)	141, 1082, 1352, 1500, 1548
TscAI	CASTG	3 cut(s)	711, 1224, 1273
TseFI	GTSAC	3 cut(s)	202, 595, 1146
TseI	GCWGC	7 cut(s)	155, 490, 731, 846, 992, 1282, 1285
Tsp45I	GTSAC	3 cut(s)	202, 595, 1146
TspGWI	ACGGA	2 cut(s)	271, 648
TspRI	CASTG	3 cut(s)	711, 1224, 1273
Van91I	CCANNNNNTGG	1 cut(s)	24
VpaK11BI	GGWCC	1 cut(s)	430
VspI	ATTAAT	1 cut(s)	1548
XapI	RAATTY	2 cut(s)	273, 496
XbaI	TCTAGA	1 cut(s)	1291
XceI	RCATGY	2 cut(s)	729, 883
XmiI	GTMKAC	1 cut(s)	320
XmnI	GAANNNNTTC	1 cut(s)	263
XspI	CTAG	3 cut(s)	746, 1052, 1292
ZrmI	AGTACT	2 cut(s)	1026, 1497
Zsp2I	ATGCAT	1 cut(s)	778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.