Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001793

Physical Location & Seq

Genomic Coordinates Reverse (-)

3211503 .. 3217246

Gene Structure 5744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0022600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGTTGATAAGAATTGGTCAAGGGAGGGCATACAAGCTGCTGTGCAAAGAGATTATGGTATGACACCCGGTTACCAGATGTGTTACAGGGCGAAAAAAAGGGCAGCAAGGATTGCAGAAGGTACAGTTGAGGATCAATACAATCTATTAGAGTCCTATGCGGCAGTTCTAAAGAAGACAAACCCTAACACTTCAGTGTGGATTGAAGGAGATCTAGAGGGTGAAAATGTTAGAAGGTTCAAAAGAATATACATATGCTTTGGTGCTATGAAGAAGGGATGGACAGAAGGCTGCAGACCAATAATTGGTGTTGATGGATGCCATTTGAAGACCGTGCACAAAGGGCAATTACTGACAGCTGTTGGCATAGACGGGAACAATGGCATGTACCCTATAGCATGGGCTGTCGTTGAGAAAGAAACAAGGGAAGCATGGACATGGTTCTTCAAGTTTCTCAAAGATGATTTGTGCCTCGTAAATGACTACTCCTATGTGTTCATGAGTGACAAGCAAAAAGGGATATTGGAGGCTGTGAAGGAGTTGTTCCCTAATGCTAGTCATAGACATTGTGCGAGGCATTTATATAATAACTTTAAAGGAGATGGAAATGTTGGTCAGGAGCTTAAGGACTTGTTTTGGGCAGCTGCAAGATCAACCACAAAGAACCATTGGATTAAGAATCTTGATTCCATTCATTCTAAGAGCACAAAAGCCTGGAATTTCTTGAAAGACAAGCCCGCTGAGCATTGGAGCAGATCACACTTCAAGGTTGAGCCCAAGTGCGATATTCTACTTAACAACCATTGTGAGAGCTATAACTCTAAGATTCTCCCAGCTAGGAAGATGCCAATTTTGGGATTGTTGGAGGATATGAGAATAAACTCAATGATAAGACATGCAAATCGGAGGTGTGCAGGTCCTAGATGGAAGAGTAAAGTTGGACCTAGAATTGAAAAAAATCTGAAAAAAAATGCAGATAGAAGCCATGAGTACACCCCACTAGAGTCTTCGCATTTGAGGTTTCAAGTTCAAGGAAAAGGAGTGGCTTGCCAATCAGGAGTTATTAGTTTGCATGATGTTGATCTCCAAGCAAGGTCATGTACCTGCAAGAGGTGGGAACTCAGTGGACTTCCATGTCCACATGCAATCGCTGCAATATTCTCCAAGGGTTACAGGCCAGATGACTTTGTGGATGAGTCTCTTTCACTAAAGAACTACATGCTTGCATATGAACCTGCAATAAACCCAATCCCTGGTGTTGATGAATGGGAGGTTGTTGAGAGGCCCATTTTACCTCCAAGGTACACTAGAGGACCTGGAAGGCCTAAGCTATCAAGAAACAAGGAACCAGGTGAGCTACCACCACCTCCTGGAACAACAAAGTTGTCAAGAAGTTACCATCAGTCCATTACTTGTTCAGTTTGTAAAAAAGATGGCCATAATAAGAGGACTTGTTCAAGGGGACAGCAACAAGGCAATGATTCCCAAGCTGGGGTTCAACCATCAGAAACTGATGATCAGAGTGTCCATGTGGAGCAAGCTGAAAATGTTCAAAGTGATGTGCAAGTTGAAAGTGATATGCATTCTGGATCAGTGCAGCAAACTGCAAATGTACCAACACCCTCAATTGTTGCAAGTGCTTCATCTCAACCGATGATCTCATCACCACCTCTACCTCAGTCTTCTTCGCAGCCCACTGTTATCGGATCATCTCATACATCCAATACATTTGTATGTCCTAAGACAGGGATGTCATTCAAGACCAAGTCAATAGCACATAAGCCTAAGCCTAAACCTATGACAGGAACAAGCACTAAAGCAAGAGCCCAACAAGGACCAAAGGAGGGTTCCAACAAGAAAATTTGGAAGCCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

624

Amino Acids

69.97

Weight (kDa)

9.36

Isoelectric Point (pI)

42.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MULE	PF10551	102 - 197	8.4e-19	MULE transposase domain
Transposase_mut	PF00872	115 - 276	2e-08	Transposase, Mutator family
SWIM	PF04434	359 - 389	2.8e-08	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19110 AT2G19110 AT2G19110 AT4G30110 AT4G30110 AT4G30120 AT4G30120
fragaria_vesca	FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520
malus_domestica	MD00G1104400.v1.1 MD01G1183400.v1.1 MD01G1183700.v1.1 MD01G1184000.v1.1 MD01G1184300.v1.1 MD13G1244500.v1.1 MD16G1252700.v1.1
prunus_persica	Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1
pyrus_communis	pycom13g21550 pycom16g21330
rosa_chinensis	RchiOBHm_Chr2g0143431 RchiOBHm_Chr4g0400101
rosa_laevigata	RLG00000009214 RLG00000020035
rosa_multiflora	Rmu_sc0000037.1_g000006
rosa_roxburghii	Rroxscaffold_2G00101850 Rroxscaffold_5G00345040 Rroxscaffold_5G00345070
rosa_rugosa	Rorug02G0381400 Rorug04G0022600 Rorug04G0022600
rosa_samantha	Rh2AG434400 Rh2BG442200 Rh2CG420300 Rh2DG452400 Rh4BG096400 Rh4CG107500 Rh4DG093000
rosa_wichuraiana	Rw2G035400 Rw4G008180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1134, 1750
Acc36I	ACCTGC	3 cut(s)	905, 1112, 1243
AccB7I	CCANNNNNTGG	3 cut(s)	305, 1253, 1370
AciI	CCGC	2 cut(s)	161, 738
AclWI	GGATC	3 cut(s)	141, 1597, 1714
AcoI	YGGCCR	1 cut(s)	1435
AcsI	RAATTY	2 cut(s)	718, 1860
AcuI	CTGAAG	1 cut(s)	177
AfaI	GTAC	6 cut(s)	124, 389, 992, 1102, 1304, 1614
AflII	CTTAAG	1 cut(s)	623
AjnI	CCWGG	5 cut(s)	713, 1252, 1315, 1348, 1369
AjuI	GAANNNNNNNTTGG	4 cut(s)	1479, 1511, 1831, 1863
AleI	CACNNNNGTG	1 cut(s)	194
Alw21I	GWGCWC	2 cut(s)	339, 707
Alw26I	GTCTC	1 cut(s)	1203
Alw44I	GTGCAC	1 cut(s)	335
AlwI	GGATC	3 cut(s)	141, 1597, 1714
AlwNI	CAGNNNCTG	1 cut(s)	1511
AoxI	GGCC	4 cut(s)	1175, 1283, 1322, 1435
ApaLI	GTGCAC	1 cut(s)	335
ApeKI	GCWGC	8 cut(s)	38, 104, 291, 641, 644, 1151, 1597, 1690
ApoI	RAATTY	2 cut(s)	718, 1860
Asp700I	GAANNNNTTC	1 cut(s)	1548
AspS9I	GGNCC	5 cut(s)	917, 941, 1284, 1313, 1835
AsuC2I	CCSGG	1 cut(s)	69
AsuHPI	GGTGA	3 cut(s)	233, 1364, 1656
AvaII	GGWCC	4 cut(s)	917, 941, 1313, 1835
BaeGI	GKGCMC	1 cut(s)	339
BalI	TGGCCA	1 cut(s)	1437
BanII	GRGCYC	2 cut(s)	777, 1828
BbsI	GAAGAC	4 cut(s)	182, 335, 999, 1674
Bbv12I	GWGCWC	2 cut(s)	339, 707
BbvI	GCAGC	8 cut(s)	25, 116, 278, 631, 653, 1138, 1609, 1702
BccI	CCATC	7 cut(s)	273, 308, 596, 918, 1407, 1427, 1510
BceAI	ACGGC	1 cut(s)	1855
BciT130I	CCWGG	5 cut(s)	715, 1254, 1317, 1350, 1371
BclI	TGATCA	1 cut(s)	1516
BcnI	CCSGG	1 cut(s)	69
BcoDI	GTCTC	1 cut(s)	1203
BfaI	CTAG	7 cut(s)	215, 555, 837, 921, 945, 1001, 1308
BfmI	CTRYAG	2 cut(s)	292, 393
BfrI	CTTAAG	1 cut(s)	623
BfuAI	ACCTGC	3 cut(s)	905, 1112, 1243
BglII	AGATCT	1 cut(s)	211
BisI	GCNGC	9 cut(s)	39, 105, 162, 292, 642, 645, 1152, 1598, 1691
BlpI	GCTNAGC	1 cut(s)	741
BlsI	GCNGC	9 cut(s)	40, 106, 163, 293, 643, 646, 1153, 1599, 1692
Bme1390I	CCNGG	6 cut(s)	69, 715, 1254, 1317, 1350, 1371
Bme18I	GGWCC	4 cut(s)	917, 941, 1313, 1835
BmgT120I	GGNCC	5 cut(s)	917, 941, 1284, 1313, 1835
BmiI	GGNNCC	2 cut(s)	1347, 1849
BmrFI	CCNGG	6 cut(s)	69, 715, 1254, 1317, 1350, 1371
BmsI	GCATC	2 cut(s)	308, 834
BpiI	GAAGAC	4 cut(s)	182, 335, 999, 1674
Bpu10I	CCTNAGC	2 cut(s)	1326, 1785
Bpu1102I	GCTNAGC	1 cut(s)	741
BpuMI	CCSGG	1 cut(s)	69
BsaBI	GATNNNNATC	1 cut(s)	1080
BsaJI	CCNNGG	3 cut(s)	1164, 1252, 1298
Bse3DI	GCAATG	1 cut(s)	1483
Bse8I	GATNNNNATC	1 cut(s)	1080
BseBI	CCWGG	5 cut(s)	715, 1254, 1317, 1350, 1371
BseDI	CCNNGG	3 cut(s)	1164, 1252, 1298
BseGI	GGATG	5 cut(s)	284, 323, 1198, 1718, 1755
BseJI	GATNNNNATC	1 cut(s)	1080
BseMI	GCAATG	1 cut(s)	1483
BseMII	CTCAG	3 cut(s)	732, 1135, 1691
BseSI	GKGCMC	1 cut(s)	339
BseXI	GCAGC	8 cut(s)	25, 116, 278, 631, 653, 1138, 1609, 1702
BseYI	CCCAGC	2 cut(s)	832, 1490
BsgI	GTGCAG	2 cut(s)	933, 1616
BshFI	GGCC	4 cut(s)	1177, 1285, 1324, 1437
BsiHKAI	GWGCWC	2 cut(s)	339, 707
BsiSI	CCGG	1 cut(s)	69
BslFI	GGGAC	1 cut(s)	1476
BsmAI	GTCTC	1 cut(s)	1203
BsmFI	GGGAC	1 cut(s)	1476
BsmI	GAATGC	1 cut(s)	1582
BsnI	GGCC	4 cut(s)	1177, 1285, 1324, 1437
Bsp1286I	GDGCHC	4 cut(s)	339, 707, 777, 1828
Bsp143I	GATC	9 cut(s)	133, 211, 650, 755, 1081, 1516, 1589, 1656, 1706
Bsp1720I	GCTNAGC	1 cut(s)	741
BspACI	CCGC	2 cut(s)	161, 738
BspANI	GGCC	4 cut(s)	1177, 1285, 1324, 1437
BspCNI	CTCAG	3 cut(s)	733, 1134, 1690
BspHI	TCATGA	1 cut(s)	498
BspLI	GGNNCC	2 cut(s)	1347, 1849
BspMAI	CTGCAG	1 cut(s)	296
BspMI	ACCTGC	3 cut(s)	905, 1112, 1243
BspPI	GGATC	3 cut(s)	141, 1597, 1714
BspTI	CTTAAG	1 cut(s)	623
BsrDI	GCAATG	1 cut(s)	1483
BssECI	CCNNGG	3 cut(s)	1164, 1252, 1298
BssMI	GATC	9 cut(s)	133, 211, 650, 755, 1081, 1516, 1589, 1656, 1706
BssT1I	CCWWGG	2 cut(s)	1164, 1298
Bst2UI	CCWGG	5 cut(s)	715, 1254, 1317, 1350, 1371
Bst4CI	ACNGT	3 cut(s)	127, 334, 1699
Bst6I	CTCTTC	1 cut(s)	923
BstAFI	CTTAAG	1 cut(s)	623
BstAPI	GCANNNNNTGC	2 cut(s)	113, 1151
BstC8I	GCNNGC	4 cut(s)	738, 1048, 1224, 1539
BstDEI	CTNAG	8 cut(s)	699, 741, 822, 1121, 1326, 1677, 1740, 1785
BstEII	GGTNACC	1 cut(s)	71
BstENI	CCTNNNNNAGG	3 cut(s)	1108, 1743, 1800
BstF5I	GGATG	5 cut(s)	284, 323, 1198, 1718, 1755
BstKTI	GATC	9 cut(s)	136, 214, 653, 758, 1084, 1519, 1592, 1659, 1709
BstMAI	GTCTC	1 cut(s)	1203
BstMBI	GATC	9 cut(s)	133, 211, 650, 755, 1081, 1516, 1589, 1656, 1706
BstMWI	GCNNNNNNNGC	4 cut(s)	113, 343, 742, 1151
BstNI	CCWGG	5 cut(s)	715, 1254, 1317, 1350, 1371
BstNSI	RCATGY	4 cut(s)	388, 899, 1145, 1222
BstPI	GGTNACC	1 cut(s)	71
BstSCI	CCNGG	6 cut(s)	67, 713, 1252, 1315, 1348, 1369
BstSFI	CTRYAG	2 cut(s)	292, 393
BstSLI	GKGCMC	1 cut(s)	339
BstV1I	GCAGC	8 cut(s)	25, 116, 278, 631, 653, 1138, 1609, 1702
BstV2I	GAAGAC	4 cut(s)	182, 335, 999, 1674
BstX2I	RGATCY	1 cut(s)	211
BstYI	RGATCY	1 cut(s)	211
BsuRI	GGCC	4 cut(s)	1177, 1285, 1324, 1437
BtsCI	GGATG	5 cut(s)	284, 323, 1198, 1718, 1755
BtsIMutI	CAGTG	4 cut(s)	201, 1129, 1599, 1695
BveI	ACCTGC	3 cut(s)	905, 1112, 1243
Cac8I	GCNNGC	4 cut(s)	738, 1048, 1224, 1539
CaiI	CAGNNNCTG	1 cut(s)	1511
CciI	TCATGA	1 cut(s)	498
Cfr13I	GGNCC	5 cut(s)	917, 941, 1284, 1313, 1835
CsiI	ACCWGGT	1 cut(s)	1348
Csp6I	GTAC	6 cut(s)	123, 388, 991, 1101, 1303, 1613
CviQI	GTAC	6 cut(s)	123, 388, 991, 1101, 1303, 1613
DdeI	CTNAG	8 cut(s)	699, 741, 822, 1121, 1326, 1677, 1740, 1785
DpnI	GATC	9 cut(s)	135, 213, 652, 757, 1083, 1518, 1591, 1658, 1708
DpnII	GATC	9 cut(s)	133, 211, 650, 755, 1081, 1516, 1589, 1656, 1706
DraI	TTTAAA	1 cut(s)	595
DrdI	GACNNNNNNGTC	2 cut(s)	1134, 1750
DseDI	GACNNNNNNGTC	2 cut(s)	1134, 1750
EaeI	YGGCCR	1 cut(s)	1435
Eam1104I	CTCTTC	1 cut(s)	923
EarI	CTCTTC	1 cut(s)	923
Eco130I	CCWWGG	2 cut(s)	1164, 1298
Eco147I	AGGCCT	1 cut(s)	1324
Eco24I	GRGCYC	2 cut(s)	777, 1828
Eco47I	GGWCC	4 cut(s)	917, 941, 1313, 1835
Eco57I	CTGAAG	1 cut(s)	177
Eco91I	GGTNACC	1 cut(s)	71
EcoNI	CCTNNNNNAGG	3 cut(s)	1108, 1743, 1800
EcoO109I	RGGNCCY	2 cut(s)	917, 1313
EcoO65I	GGTNACC	1 cut(s)	71
EcoRII	CCWGG	5 cut(s)	713, 1252, 1315, 1348, 1369
EcoT14I	CCWWGG	2 cut(s)	1164, 1298
EcoT22I	ATGCAT	1 cut(s)	1584
EcoT38I	GRGCYC	2 cut(s)	777, 1828
ErhI	CCWWGG	2 cut(s)	1164, 1298
FaqI	GGGAC	1 cut(s)	1476
FauI	CCCGC	1 cut(s)	745
FauNDI	CATATG	2 cut(s)	254, 1228
FbaI	TGATCA	1 cut(s)	1516
Fnu4HI	GCNGC	9 cut(s)	39, 105, 162, 292, 642, 645, 1152, 1598, 1691
FokI	GGATG	5 cut(s)	291, 330, 1205, 1705, 1762
FriOI	GRGCYC	2 cut(s)	777, 1828
Fsp4HI	GCNGC	9 cut(s)	39, 105, 162, 292, 642, 645, 1152, 1598, 1691
FspBI	CTAG	7 cut(s)	215, 555, 837, 921, 945, 1001, 1308
GluI	GCNGC	9 cut(s)	39, 105, 162, 292, 642, 645, 1152, 1598, 1691
GsaI	CCCAGC	2 cut(s)	836, 1494
HaeIII	GGCC	4 cut(s)	1177, 1285, 1324, 1437
HapII	CCGG	1 cut(s)	69
HinfI	GANTC	7 cut(s)	152, 679, 686, 826, 1004, 1196, 1481
HpaII	CCGG	1 cut(s)	69
HphI	GGTGA	3 cut(s)	233, 1364, 1656
Hpy166II	GTNNAC	5 cut(s)	337, 993, 1127, 1139, 1305
Hpy188I	TCNGA	5 cut(s)	906, 963, 1507, 1521, 1706
Hpy8I	GTNNAC	5 cut(s)	337, 993, 1127, 1139, 1305
HpyAV	CCTTC	7 cut(s)	113, 200, 228, 268, 281, 529, 1314
HpyCH4III	ACNGT	3 cut(s)	127, 334, 1699
HpyF10VI	GCNNNNNNNGC	4 cut(s)	113, 343, 742, 1151
HpyF3I	CTNAG	8 cut(s)	699, 741, 822, 1121, 1326, 1677, 1740, 1785
Ksp22I	TGATCA	1 cut(s)	1516
Kzo9I	GATC	9 cut(s)	133, 211, 650, 755, 1081, 1516, 1589, 1656, 1706
LmnI	GCTCC	3 cut(s)	619, 750, 1534
Lsp1109I	GCAGC	8 cut(s)	25, 116, 278, 631, 653, 1138, 1609, 1702
LweI	GCATC	2 cut(s)	308, 834
MabI	ACCWGGT	1 cut(s)	1348
MaeI	CTAG	7 cut(s)	215, 555, 837, 921, 945, 1001, 1308
MaeIII	GTNAC	5 cut(s)	71, 83, 503, 1169, 1394
MalI	GATC	9 cut(s)	135, 213, 652, 757, 1083, 1518, 1591, 1658, 1708
MboI	GATC	9 cut(s)	133, 211, 650, 755, 1081, 1516, 1589, 1656, 1706
MboII	GAAGA	9 cut(s)	187, 283, 340, 436, 853, 940, 999, 1674, 1677
MfeI	CAATTG	1 cut(s)	1626
MflI	RGATCY	1 cut(s)	211
MhlI	GDGCHC	4 cut(s)	339, 707, 777, 1828
MlsI	TGGCCA	1 cut(s)	1437
MluCI	AATT	8 cut(s)	13, 303, 347, 718, 849, 948, 1626, 1860
MluNI	TGGCCA	1 cut(s)	1437
MlyI	GAGTC	3 cut(s)	161, 1013, 1205
MmeI	TCCRAC	3 cut(s)	843, 919, 1875
Mox20I	TGGCCA	1 cut(s)	1437
Mph1103I	ATGCAT	1 cut(s)	1584
MroXI	GAANNNNTTC	1 cut(s)	1548
MscI	TGGCCA	1 cut(s)	1437
MseI	TTAA	4 cut(s)	594, 624, 675, 795
MslI	CAYNNNNRTG	3 cut(s)	194, 436, 1732
Msp20I	TGGCCA	1 cut(s)	1437
MspA1I	CMGCKG	3 cut(s)	359, 644, 740
MspCI	CTTAAG	1 cut(s)	623
MspI	CCGG	1 cut(s)	69
MspR9I	CCNGG	6 cut(s)	69, 715, 1254, 1317, 1350, 1371
MunI	CAATTG	1 cut(s)	1626
Mva1269I	GAATGC	1 cut(s)	1582
MvaI	CCWGG	5 cut(s)	715, 1254, 1317, 1350, 1371
MwoI	GCNNNNNNNGC	4 cut(s)	113, 343, 742, 1151
NciI	CCSGG	1 cut(s)	69
NdeI	CATATG	2 cut(s)	254, 1228
NdeII	GATC	9 cut(s)	133, 211, 650, 755, 1081, 1516, 1589, 1656, 1706
NlaIV	GGNNCC	2 cut(s)	1347, 1849
NmuCI	GTSAC	1 cut(s)	503
NsiI	ATGCAT	1 cut(s)	1584
NspI	RCATGY	4 cut(s)	388, 899, 1145, 1222
OliI	CACNNNNGTG	1 cut(s)	194
PagI	TCATGA	1 cut(s)	498
PceI	AGGCCT	1 cut(s)	1324
PctI	GAATGC	1 cut(s)	1582
PdmI	GAANNNNTTC	1 cut(s)	1548
PfeI	GAWTC	4 cut(s)	679, 686, 826, 1481
PflFI	GACNNNGTC	1 cut(s)	1765
PflMI	CCANNNNNTGG	3 cut(s)	305, 1253, 1370
PfoI	TCCNGGA	1 cut(s)	1369
PkrI	GCNGC	9 cut(s)	40, 106, 163, 293, 643, 646, 1153, 1599, 1692
PleI	GAGTC	3 cut(s)	160, 1012, 1204
PpsI	GAGTC	3 cut(s)	160, 1012, 1204
PpuMI	RGGWCCY	2 cut(s)	917, 1313
Psp5II	RGGWCCY	2 cut(s)	917, 1313
Psp6I	CCWGG	5 cut(s)	713, 1252, 1315, 1348, 1369
PspEI	GGTNACC	1 cut(s)	71
PspFI	CCCAGC	2 cut(s)	832, 1490
PspGI	CCWGG	5 cut(s)	713, 1252, 1315, 1348, 1369
PspN4I	GGNNCC	2 cut(s)	1347, 1849
PspPI	GGNCC	5 cut(s)	917, 941, 1284, 1313, 1835
PspPPI	RGGWCCY	2 cut(s)	917, 1313
PstI	CTGCAG	1 cut(s)	296
PstNI	CAGNNNCTG	1 cut(s)	1511
PsuI	RGATCY	1 cut(s)	211
PsyI	GACNNNGTC	1 cut(s)	1765
PvuII	CAGCTG	2 cut(s)	359, 644
RsaI	GTAC	6 cut(s)	124, 389, 992, 1102, 1304, 1614
RsaNI	GTAC	6 cut(s)	123, 388, 991, 1101, 1303, 1613
RseI	CAYNNNNRTG	3 cut(s)	194, 436, 1732
SaqAI	TTAA	4 cut(s)	594, 624, 675, 795
SatI	GCNGC	9 cut(s)	39, 105, 162, 292, 642, 645, 1152, 1598, 1691
Sau3AI	GATC	9 cut(s)	133, 211, 650, 755, 1081, 1516, 1589, 1656, 1706
Sau96I	GGNCC	5 cut(s)	917, 941, 1284, 1313, 1835
SchI	GAGTC	3 cut(s)	161, 1013, 1205
ScrFI	CCNGG	6 cut(s)	69, 715, 1254, 1317, 1350, 1371
SduI	GDGCHC	4 cut(s)	339, 707, 777, 1828
SexAI	ACCWGGT	1 cut(s)	1348
SfaNI	GCATC	2 cut(s)	308, 834
SfcI	CTRYAG	2 cut(s)	292, 393
SinI	GGWCC	4 cut(s)	917, 941, 1313, 1835
SmiMI	CAYNNNNRTG	3 cut(s)	194, 436, 1732
SmlI	CTYRAG	1 cut(s)	623
SmoI	CTYRAG	1 cut(s)	623
Sse9I	AATT	8 cut(s)	13, 303, 347, 718, 849, 948, 1626, 1860
SseBI	AGGCCT	1 cut(s)	1324
SsiI	CCGC	2 cut(s)	161, 738
SspI	AATATT	1 cut(s)	1158
SspMI	CTAG	7 cut(s)	215, 555, 837, 921, 945, 1001, 1308
StuI	AGGCCT	1 cut(s)	1324
StyD4I	CCNGG	6 cut(s)	67, 713, 1252, 1315, 1348, 1369
StyI	CCWWGG	2 cut(s)	1164, 1298
TaaI	ACNGT	3 cut(s)	127, 334, 1699
TasI	AATT	8 cut(s)	13, 303, 347, 718, 849, 948, 1626, 1860
TatI	WGTACW	1 cut(s)	990
TauI	GCSGC	1 cut(s)	164
TfiI	GAWTC	4 cut(s)	679, 686, 826, 1481
Tru1I	TTAA	4 cut(s)	594, 624, 675, 795
Tru9I	TTAA	4 cut(s)	594, 624, 675, 795
TscAI	CASTG	4 cut(s)	201, 1129, 1599, 1702
TseFI	GTSAC	1 cut(s)	503
TseI	GCWGC	8 cut(s)	38, 104, 291, 641, 644, 1151, 1597, 1690
Tsp45I	GTSAC	1 cut(s)	503
TspDTI	ATGAA	6 cut(s)	284, 487, 683, 1245, 1278, 1632
TspRI	CASTG	4 cut(s)	201, 1129, 1599, 1702
Tth111I	GACNNNGTC	1 cut(s)	1765
Van91I	CCANNNNNTGG	3 cut(s)	305, 1253, 1370
Vha464I	CTTAAG	1 cut(s)	623
VneI	GTGCAC	1 cut(s)	335
VpaK11BI	GGWCC	4 cut(s)	917, 941, 1313, 1835
XagI	CCTNNNNNAGG	3 cut(s)	1108, 1743, 1800
XapI	RAATTY	2 cut(s)	718, 1860
XbaI	TCTAGA	1 cut(s)	214
XceI	RCATGY	4 cut(s)	388, 899, 1145, 1222
XmnI	GAANNNNTTC	1 cut(s)	1548
XspI	CTAG	7 cut(s)	215, 555, 837, 921, 945, 1001, 1308
Zsp2I	ATGCAT	1 cut(s)	1584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.