Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001793

Physical Location & Seq

Genomic Coordinates Reverse (-)

6899289 .. 6909835

Gene Structure 10547 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g07520.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3213 bp

ATGGCTGAGCAGGCAGCTAAAAAGTTGCAGAAAAGCTATTTTGATGTGTTGGGCTTGTGCTGTTCATCAGAAGTGCCTTTGGTTGAGAACATCTTGAAGCCTCTTCTTGGCGTCAAAGAGGTTTCTGTGGTTGTGGCAACAAGAACTGTGATTGTTGTTCATGATAGCCTCCTCATTTCTCAGCTTCAAATTGTCAAGGCATTGAATCAAGCAAGACTAGAAGCAAATGTGAGAGTCTATGGGGCAGAGAACAGTTTCAAACAAAAATGGCCAAGTCCATATGCAATTGCCAGCGGCGTCTTCCTCTTGCTTTCATTACTCAAATTCGTATATCGACCCATGGGATGGCTGGCTCTCGGCGCAGTCGCTGTCGGCATTTTCCCTATTGCTATGAAAGGCATAGCATCCATTCGAAATCTTCGGCTCGACATCAACATCCTTATGATTGTTGCAGTGATCGGTACAATTGCTTTAAATGATTATCTGGAAGCTGGCACTATTGTATTTCTCTTCACCATCGCAGAGTGGCTCGAGTCTAGGGCAGGCCACAAGGCGAAAGCAGTGATGTCATCTTTGATGAGTATGGCCCCTCAGAAAGCAGTGCTAGCGGATACAGGAGAAGTTGTAGATGTTGATGAGGTTAAGCTGAACACACTCCTGGCTGTGAAGGCCGGTGAAGTTATTCCCATTGATGGGATAGTTGTTGATGGCAAAGGTGAGGTGGATGAGAAAACACTAACTGGAGAGTCATATCCAGTTACCAAGGAAAAGGACTCCACTGTTTGGGCTGGCACCGTCAATCTCAATGGTTATCTCAGTGTCAAAACTACAGCCTTAGCTGAAGACTGTGTAGTTGCTAAAATGTCTAAACTTGTGGAGGAGGCACAAAACAGCAAAAGCCGAACTGAGAGATTCATTGACAAGTGTACAAAGTTTTATACCCCAGCGGTCCTAGTCATATCAATTTCTATTGCGGTGATTCCAGCCGCATTACGTGTTCATAATTGGAGCAAATGGTTTCACTTAGCTTTGGTTGTTTTAGTAAGTGCTTGTCCATGTGCTCTCATCCTCTCTACACCAGTTGTGACTTTCTGCACACTTACAAAAGCAGCTACATCCGGTATCCTAATCAAAGGGGGTGACTTCATTGAGACCCTTGCTAAAGTCAAGATTATGGCTTTTGACAAAACTGGTACGATAACGAGGGGTGAATTTGTGGTGATGGATTTTAAATCTCTCCGTGACGACATTAGCTTGAACGCATTGATTTACTGGGTTTCAAGCATTGAGAGGAAGGCCAGTCATCCAATGGCAGCTGCTCTTGTTGATTACGGGAGATCGTTTTCTATTGAGCCAAACCCGGAAAATGTGGAGAACTTCGAAAACTTTCCTGGGGAAGGCGTCCATGGAAAGATAGATGGACAGGATATTTATATTGGAAGCAAAAGAATAGCTTTGAGAGCGTCTTGTGAAACAGTTCCAACCATTGAAGGATCTAAGGGTGGGAAGACTATAGGTTACATATACTGTGGCCGAACTCCTGCTGGAGTGTTTACACTGTCCGATGCTTGTCGAACTGGGGCTGCAGAGGCTGTTAGGGAGCTGAAAAAATTGGGTATTAAAACAGCCATGCTTACAGGAGACAGCCATGCTGCAGCTATGCAAGCGAATGAGCAGCTTGAGCAAGCTCTGGATGTAGTCCACGCGGAACTTCTGCCCGAAGACAAGGCCAAAATCATTAAAGAATTAAAAGTGGAAGGAAAAACAGCCATGGTTGGGGATGGCATCAACGATGCCCCTGCTTTAGCCACGGCTGATATTGGAATCTCGATGGGCATTTCAGGGTCAGCCCTTGCTCAAGATACTGGGAATATCATTCTAATGTCAAATGATGTCAGGAAACTACCGAAGGCAATCCAGCTTGCAAGAAGAGCCAAACGTAAAGTAATTGAAAATGTGATCCTATCGATCAGTACTAAAGCTGGAATTCTGGCACTAGCATTTGCGGGACATCCACTTGTTTGGGCAGCAGTTCTTGCAGATGTTGGGACATGCTTGCTTGTCATATTAAACAGCATGCTGCTTTTGCGAGGAGCTCACAGGCATGGAGACAAACATGTACATAATCATGGAAAACATATACACAGCCACTCTCATGGAAACCAGAAGTGTTGCTCTGACCACAAAGTTGTAGAGGTGTGCAAGTCTCAAAAGTGCTCTTCTCAGAGGTGTGCATCAGAATGCAGGCCTAGTTCCAATTTGAGCTTGCCTGGCAATTCTACATGCAGTAGTGACCTGCATGAGGCAAAGCACCATGATCATGGAAGCTGCAGATCTCATAACCGTGGAGGCAATAGGCAAAGCCACACTCACACAAACCAGCATTGTTTCTCGGATAGCAAAACTGTAGTAGTGCATGAACCTCCAAAGTGTTCTTCTCAGAGTTGTGGACCAGACTGCCAGCCTAGTCCTCTGAAGGCAAGCTTGGCTGATGATTGTAAGTGTGAGGATTCAGAAGAGATTCACAGTTGCCCAAGAAATGATGACTTGCATGAGGCAAAGAACTGCGATAAACATGATCTGGAGTCACAAATTAATCACAAGCATGGCTGTTTGCAGACTGAAAATTTGAGCTCATGTGAAGATCATGGGTGCACTGCCTTGACTGTAAGGCATGGAAGTTGTGGGGAGGGTTATGGAATCCAATCAATCCATGAGAAAAAAGACTGCAACCACCATTCTGCCCCTTCTTTGGAGGAAAATAGGAGACCAAAGAGTGTTGATCATTGCCACTCAACACATTGTGACAAAGAGCATATCAGCAATGAAGCTTTTCAGGAAACAGCTAGCACAAGCTGTGAGGAGCATCATCATCACCATCATCAACAACATCAACATCAAGATCAACATCATCATCATCATCATCATAATCACCACCATCATCATCAACATCAAACATCACCTCCTCATATGACTATCGATATTATACAGAGTAGTAACCATACCAAATCTGCGCTCCCACATGCTTGCAACAGTGGACGAATAAGAGAAAAAGAGGTCTGTTGTCCACAGTCGATGGGAATCAATGCCTGCATGTTAGAAAAAAGAGAAGTTGGGGGATGCTGCAAGAGCTACATGAAGGAATGCTGTGGTGTACATGGACATATTGGCTCTAGCTTTCAAGGTTCCTTATCAGAAGTAACAATTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006950 GO:0008150 GO:0009506 GO:0009636 GO:0010035 GO:0010038 GO:0010043 GO:0015691 GO:0016020 GO:0030001 GO:0030054 GO:0031090 GO:0032025 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0061687 GO:0065007 GO:0065008 GO:0070838 GO:0071585 GO:0071944 GO:0072507 GO:0072511 GO:0097501 GO:0098588 GO:0098754 GO:0098771 GO:0098805 GO:1990170

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

1071

Amino Acids

116.41

Weight (kDa)

6.95

Isoelectric Point (pI)

40.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	20 - 110	8.2e-22	P-type ATPase actuator domain
Hydrolase	PF00702	206 - 423	1.2e-28	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19110 AT2G19110 AT2G19110 AT4G30110 AT4G30110 AT4G30120 AT4G30120
fragaria_vesca	FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520
malus_domestica	MD00G1104400.v1.1 MD01G1183400.v1.1 MD01G1183700.v1.1 MD01G1184000.v1.1 MD01G1184300.v1.1 MD13G1244500.v1.1 MD16G1252700.v1.1
prunus_persica	Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1
pyrus_communis	pycom13g21550 pycom16g21330
rosa_chinensis	RchiOBHm_Chr2g0143431 RchiOBHm_Chr4g0400101
rosa_laevigata	RLG00000009214 RLG00000020035
rosa_multiflora	Rmu_sc0000037.1_g000006
rosa_roxburghii	Rroxscaffold_2G00101850 Rroxscaffold_5G00345040 Rroxscaffold_5G00345070
rosa_rugosa	Rorug02G0381400 Rorug04G0022600 Rorug04G0022600
rosa_samantha	Rh2AG434400 Rh2BG442200 Rh2CG420300 Rh2DG452400 Rh4BG096400 Rh4CG107500 Rh4DG093000
rosa_wichuraiana	Rw2G035400 Rw4G008180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2304
AccB1I	GGYRCC	1 cut(s)	791
AccB7I	CCANNNNNTGG	2 cut(s)	345, 783
AccII	CGCG	1 cut(s)	1706
AciI	CCGC	7 cut(s)	294, 608, 947, 974, 987, 1706, 2006
AclWI	GGATC	2 cut(s)	1501, 1954
AcoI	YGGCCR	2 cut(s)	269, 1531
AcsI	RAATTY	4 cut(s)	323, 1211, 1986, 2626
AcuI	CTGAAG	2 cut(s)	861, 2495
AcyI	GRCGYC	3 cut(s)	111, 297, 1401
AdeI	CACNNNGTG	1 cut(s)	2804
AfaI	GTAC	6 cut(s)	463, 928, 1195, 1975, 2121, 3156
AfiI	CCNNNNNNNGG	9 cut(s)	107, 345, 692, 693, 783, 1397, 1776, 2302, 2752
AflIII	ACRYGT	2 cut(s)	994, 2116
AjnI	CCWGG	3 cut(s)	657, 1390, 2269
AjuI	GAANNNNNNNTTGG	4 cut(s)	2419, 2451, 2468, 2500
Alw21I	GWGCWC	5 cut(s)	1063, 2098, 2219, 2636, 2657
Alw26I	GTCTC	5 cut(s)	1145, 1635, 2103, 2211, 2761
Alw44I	GTGCAC	1 cut(s)	2653
AlwI	GGATC	2 cut(s)	1501, 1954
AlwNI	CAGNNNCTG	2 cut(s)	368, 1592
Ama87I	CYCGRG	1 cut(s)	530
AoxI	GGCC	8 cut(s)	269, 544, 585, 669, 1296, 1531, 1728, 2246
ApaLI	GTGCAC	1 cut(s)	2653
ApoI	RAATTY	4 cut(s)	323, 1211, 1986, 2626
ArsI	GACNNNNNNTTYG	2 cut(s)	2611, 2643
AseI	ATTAAT	1 cut(s)	2595
Asp700I	GAANNNNTTC	6 cut(s)	254, 681, 1386, 1476, 2520, 2832
AspLEI	GCGC	2 cut(s)	362, 3016
AspS9I	GGNCC	3 cut(s)	586, 949, 2450
AsuC2I	CCSGG	1 cut(s)	1361
AsuII	TTCGAA	2 cut(s)	412, 1380
AsuNHI	GCTAGC	2 cut(s)	604, 2846
AvaI	CYCGRG	1 cut(s)	530
AvaII	GGWCC	2 cut(s)	949, 2450
BaeGI	GKGCMC	1 cut(s)	2657
BalI	TGGCCA	1 cut(s)	271
BanI	GGYRCC	1 cut(s)	791
BanII	GRGCYC	2 cut(s)	2098, 2636
BbsI	GAAGAC	4 cut(s)	292, 849, 1514, 1728
Bbv12I	GWGCWC	5 cut(s)	1063, 2098, 2219, 2636, 2657
BceAI	ACGGC	1 cut(s)	1827
BcgI	CGANNNNNNTGC	2 cut(s)	1781, 1815
BciT130I	CCWGG	3 cut(s)	659, 1392, 2271
BciVI	GTATCC	2 cut(s)	604, 1133
BclI	TGATCA	2 cut(s)	2317, 2782
BcnI	CCSGG	1 cut(s)	1361
BcoDI	GTCTC	5 cut(s)	1145, 1635, 2103, 2211, 2761
BfaI	CTAG	9 cut(s)	218, 537, 605, 953, 1997, 2250, 2466, 2847, 3174
BfmI	CTRYAG	6 cut(s)	828, 1512, 1584, 1653, 2329, 2406
BfuAI	ACCTGC	1 cut(s)	2304
BfuI	GTATCC	2 cut(s)	604, 1133
BglII	AGATCT	1 cut(s)	2333
BlpI	GCTNAGC	1 cut(s)	6
BmcAI	AGTACT	1 cut(s)	1975
Bme1390I	CCNGG	4 cut(s)	659, 1361, 1392, 2271
Bme18I	GGWCC	2 cut(s)	949, 2450
BmeT110I	CYCGRG	1 cut(s)	530
BmgT120I	GGNCC	3 cut(s)	586, 949, 2450
BmiI	GGNNCC	3 cut(s)	588, 793, 3187
BmrFI	CCNGG	4 cut(s)	659, 1361, 1392, 2271
BmrI	ACTGGG	3 cut(s)	1282, 1587, 1875
BmsI	GCATC	7 cut(s)	413, 1555, 1783, 1794, 2243, 2875, 3110
BmtI	GCTAGC	2 cut(s)	608, 2850
BmuI	ACTGGG	3 cut(s)	1282, 1587, 1875
BpiI	GAAGAC	4 cut(s)	292, 849, 1514, 1728
BpmI	CTGGAG	3 cut(s)	762, 1566, 2603
Bpu10I	CCTNAGC	1 cut(s)	835
Bpu1102I	GCTNAGC	1 cut(s)	6
Bpu14I	TTCGAA	2 cut(s)	412, 1380
BpuEI	CTTGAG	2 cut(s)	1700, 1842
BpuMI	CCSGG	1 cut(s)	1361
Bsa29I	ATCGAT	2 cut(s)	1967, 2979
BsaAI	YACGTR	1 cut(s)	995
BsaBI	GATNNNNATC	2 cut(s)	2907, 3080
BsaHI	GRCGYC	3 cut(s)	111, 297, 1401
BsaI	GGTCTC	2 cut(s)	1145, 2761
BsaJI	CCNNGG	7 cut(s)	339, 762, 1391, 1405, 1770, 1809, 2344
BsaWI	WCCGGW	1 cut(s)	1118
BsaXI	ACNNNNNCTCC	4 cut(s)	609, 639, 2947, 2977
Bsc4I	CCNNNNNNNGG	9 cut(s)	107, 345, 692, 693, 783, 1397, 1776, 2302, 2752
Bse118I	RCCGGY	1 cut(s)	671
Bse1I	ACTGG	8 cut(s)	745, 755, 1079, 1195, 1277, 1299, 1582, 1870
Bse3DI	GCAATG	2 cut(s)	2785, 2830
Bse8I	GATNNNNATC	2 cut(s)	2907, 3080
BseBI	CCWGG	3 cut(s)	659, 1392, 2271
BseCI	ATCGAT	2 cut(s)	1967, 2979
BseDI	CCNNGG	7 cut(s)	339, 762, 1391, 1405, 1770, 1809, 2344
BseJI	GATNNNNATC	2 cut(s)	2907, 3080
BseLI	CCNNNNNNNGG	9 cut(s)	107, 345, 692, 693, 783, 1397, 1776, 2302, 2752
BseMI	GCAATG	2 cut(s)	2785, 2830
BseMII	CTCAG	6 cut(s)	194, 605, 829, 897, 2237, 2453
BseNI	ACTGG	8 cut(s)	745, 755, 1079, 1195, 1277, 1299, 1582, 1870
BseRI	GAGGAG	5 cut(s)	161, 893, 2106, 2876, 2955
BseSI	GKGCMC	1 cut(s)	2657
BseYI	CCCAGC	1 cut(s)	943
BsgI	GTGCAG	1 cut(s)	1078
Bsh1236I	CGCG	1 cut(s)	1706
BshFI	GGCC	8 cut(s)	271, 546, 587, 671, 1298, 1533, 1730, 2248
BshNI	GGYRCC	1 cut(s)	791
BshVI	ATCGAT	2 cut(s)	1967, 2979
BsiHKAI	GWGCWC	5 cut(s)	1063, 2098, 2219, 2636, 2657
BsiHKCI	CYCGRG	1 cut(s)	530
BsiSI	CCGG	3 cut(s)	672, 1119, 1361
BslFI	GGGAC	2 cut(s)	2022, 2062
BslI	CCNNNNNNNGG	9 cut(s)	107, 345, 692, 693, 783, 1397, 1776, 2302, 2752
BsmAI	GTCTC	5 cut(s)	1145, 1635, 2103, 2211, 2761
BsmFI	GGGAC	2 cut(s)	2022, 2062
BsmI	GAATGC	2 cut(s)	2246, 3149
BsnI	GGCC	8 cut(s)	271, 546, 587, 671, 1298, 1533, 1730, 2248
Bso31I	GGTCTC	2 cut(s)	1145, 2761
BsoBI	CYCGRG	1 cut(s)	530
Bsp119I	TTCGAA	2 cut(s)	412, 1380
Bsp1286I	GDGCHC	5 cut(s)	1063, 2098, 2219, 2636, 2657
Bsp1407I	TGTACA	3 cut(s)	926, 2119, 3154
Bsp1720I	GCTNAGC	1 cut(s)	6
Bsp19I	CCATGG	3 cut(s)	339, 1405, 1770
BspACI	CCGC	7 cut(s)	294, 608, 947, 974, 987, 1706, 2006
BspANI	GGCC	8 cut(s)	271, 546, 587, 671, 1298, 1533, 1730, 2248
BspCNI	CTCAG	6 cut(s)	193, 604, 828, 898, 2236, 2452
BspDI	ATCGAT	2 cut(s)	1967, 2979
BspFNI	CGCG	1 cut(s)	1706
BspHI	TCATGA	1 cut(s)	160
BspLI	GGNNCC	3 cut(s)	588, 793, 3187
BspMAI	CTGCAG	3 cut(s)	1588, 1657, 2333
BspMI	ACCTGC	1 cut(s)	2304
BspOI	GCTAGC	2 cut(s)	608, 2850
BspPI	GGATC	2 cut(s)	1501, 1954
BspQI	GCTCTTC	2 cut(s)	1924, 2224
BspT104I	TTCGAA	2 cut(s)	412, 1380
BspT107I	GGYRCC	1 cut(s)	791
BspTNI	GGTCTC	2 cut(s)	1145, 2761
BsrDI	GCAATG	2 cut(s)	2785, 2830
BsrFI	RCCGGY	1 cut(s)	671
BsrGI	TGTACA	3 cut(s)	926, 2119, 3154
BsrI	ACTGG	8 cut(s)	745, 755, 1079, 1195, 1277, 1299, 1582, 1870
BssAI	RCCGGY	1 cut(s)	671
BssECI	CCNNGG	7 cut(s)	339, 762, 1391, 1405, 1770, 1809, 2344
BssNI	GRCGYC	3 cut(s)	111, 297, 1401
BssT1I	CCWWGG	4 cut(s)	339, 762, 1405, 1770
Bst2UI	CCWGG	3 cut(s)	659, 1392, 2271
Bst6I	CTCTTC	5 cut(s)	108, 515, 1924, 2224, 2511
BstACI	GRCGYC	3 cut(s)	111, 297, 1401
BstAPI	GCANNNNNTGC	1 cut(s)	2036
BstAUI	TGTACA	3 cut(s)	926, 2119, 3154
BstBAI	YACGTR	1 cut(s)	995
BstBI	TTCGAA	2 cut(s)	412, 1380
BstDSI	CCRYGG	5 cut(s)	339, 1405, 1770, 1809, 2344
BstENI	CCTNNNNNAGG	2 cut(s)	1395, 2300
BstFNI	CGCG	1 cut(s)	1706
BstHHI	GCGC	2 cut(s)	362, 3016
BstMAI	GTCTC	5 cut(s)	1145, 1635, 2103, 2211, 2761
BstNI	CCWGG	3 cut(s)	659, 1392, 2271
BstNSI	RCATGY	6 cut(s)	2055, 2080, 2120, 2286, 3026, 3097
BstSCI	CCNGG	4 cut(s)	657, 1359, 1390, 2269
BstSFI	CTRYAG	6 cut(s)	828, 1512, 1584, 1653, 2329, 2406
BstSLI	GKGCMC	1 cut(s)	2657
BstUI	CGCG	1 cut(s)	1706
BstV2I	GAAGAC	4 cut(s)	292, 849, 1514, 1728
BstX2I	RGATCY	2 cut(s)	1493, 2333
BstXI	CCANNNNNNTGG	3 cut(s)	2022, 2156, 2321
BstYI	RGATCY	2 cut(s)	1493, 2333
Bsu15I	ATCGAT	2 cut(s)	1967, 2979
BsuI	GTATCC	2 cut(s)	604, 1133
BsuRI	GGCC	8 cut(s)	271, 546, 587, 671, 1298, 1533, 1730, 2248
BsuTUI	ATCGAT	2 cut(s)	1967, 2979
BtgI	CCRYGG	5 cut(s)	339, 1405, 1770, 1809, 2344
BtgZI	GCGATG	1 cut(s)	502
BtsI	GCAGTG	4 cut(s)	459, 567, 606, 2655
BtsIMutI	CAGTG	8 cut(s)	459, 567, 606, 777, 823, 1556, 2655, 3040
BveI	ACCTGC	1 cut(s)	2304
CaiI	CAGNNNCTG	2 cut(s)	368, 1592
CciI	TCATGA	1 cut(s)	160
CfoI	GCGC	2 cut(s)	362, 3016
Cfr10I	RCCGGY	1 cut(s)	671
Cfr13I	GGNCC	3 cut(s)	586, 949, 2450
ClaI	ATCGAT	2 cut(s)	1967, 2979
CseI	GACGC	4 cut(s)	100, 286, 1390, 1452
Csp6I	GTAC	6 cut(s)	462, 927, 1194, 1974, 2120, 3155
CviQI	GTAC	6 cut(s)	462, 927, 1194, 1974, 2120, 3155
DraI	TTTAAA	2 cut(s)	474, 1231
DraIII	CACNNNGTG	1 cut(s)	2804
EaeI	YGGCCR	2 cut(s)	269, 1531
Eam1104I	CTCTTC	5 cut(s)	108, 515, 1924, 2224, 2511
EarI	CTCTTC	5 cut(s)	108, 515, 1924, 2224, 2511
Ecl136II	GAGCTC	2 cut(s)	2096, 2634
Eco130I	CCWWGG	4 cut(s)	339, 762, 1405, 1770
Eco147I	AGGCCT	1 cut(s)	2248
Eco24I	GRGCYC	2 cut(s)	2098, 2636
Eco31I	GGTCTC	2 cut(s)	1145, 2761
Eco47I	GGWCC	2 cut(s)	949, 2450
Eco53kI	GAGCTC	2 cut(s)	2096, 2634
Eco57I	CTGAAG	2 cut(s)	861, 2495
Eco88I	CYCGRG	1 cut(s)	530
EcoICRI	GAGCTC	2 cut(s)	2096, 2634
EcoNI	CCTNNNNNAGG	2 cut(s)	1395, 2300
EcoRI	GAATTC	1 cut(s)	1986
EcoRII	CCWGG	3 cut(s)	657, 1390, 2269
EcoT14I	CCWWGG	4 cut(s)	339, 762, 1405, 1770
EcoT38I	GRGCYC	2 cut(s)	2098, 2636
ErhI	CCWWGG	4 cut(s)	339, 762, 1405, 1770
FalI	AAGNNNNNCTT	4 cut(s)	1438, 1470, 2468, 2500
FaqI	GGGAC	2 cut(s)	2022, 2062
FauI	CCCGC	1 cut(s)	1999
FauNDI	CATATG	2 cut(s)	280, 2970
FbaI	TGATCA	2 cut(s)	2317, 2782
FriOI	GRGCYC	2 cut(s)	2098, 2636
FspBI	CTAG	9 cut(s)	218, 537, 605, 953, 1997, 2250, 2466, 2847, 3174
GlaI	GCGC	2 cut(s)	361, 3015
GsaI	CCCAGC	1 cut(s)	947
GsuI	CTGGAG	3 cut(s)	762, 1566, 2603
HaeIII	GGCC	8 cut(s)	271, 546, 587, 671, 1298, 1533, 1730, 2248
HapII	CCGG	3 cut(s)	672, 1119, 1361
HgaI	GACGC	4 cut(s)	100, 286, 1390, 1452
HhaI	GCGC	2 cut(s)	362, 3016
Hin1I	GRCGYC	3 cut(s)	111, 297, 1401
Hin6I	GCGC	2 cut(s)	360, 3014
HinP1I	GCGC	2 cut(s)	360, 3014
HindIII	AAGCTT	2 cut(s)	2482, 2829
HpaII	CCGG	3 cut(s)	672, 1119, 1361
Hpy166II	GTNNAC	8 cut(s)	927, 1554, 1702, 2450, 2655, 3038, 3068, 3155
Hpy8I	GTNNAC	8 cut(s)	927, 1554, 1702, 2450, 2655, 3038, 3068, 3155
HpyAV	CCTTC	9 cut(s)	661, 1288, 1391, 1484, 1751, 1903, 2470, 2757, 3133
HpyCH4IV	ACGT	2 cut(s)	994, 1939
HpySE526I	ACGT	2 cut(s)	994, 1939
Hsp92I	GRCGYC	3 cut(s)	111, 297, 1401
HspAI	GCGC	2 cut(s)	360, 3014
Ksp22I	TGATCA	2 cut(s)	2317, 2782
LguI	GCTCTTC	2 cut(s)	1924, 2224
LmnI	GCTCC	5 cut(s)	1008, 1600, 2093, 2863, 3021
LweI	GCATC	7 cut(s)	413, 1555, 1783, 1794, 2243, 2875, 3110
MaeI	CTAG	9 cut(s)	218, 537, 605, 953, 1997, 2250, 2466, 2847, 3174
MaeII	ACGT	2 cut(s)	994, 1939
MfeI	CAATTG	3 cut(s)	285, 465, 3204
MflI	RGATCY	2 cut(s)	1493, 2333
MhlI	GDGCHC	5 cut(s)	1063, 2098, 2219, 2636, 2657
MlsI	TGGCCA	1 cut(s)	271
MluNI	TGGCCA	1 cut(s)	271
MlyI	GAGTC	5 cut(s)	243, 542, 755, 767, 2594
MmeI	TCCRAC	1 cut(s)	1505
Mox20I	TGGCCA	1 cut(s)	271
MroXI	GAANNNNTTC	6 cut(s)	254, 681, 1386, 1476, 2520, 2832
MscI	TGGCCA	1 cut(s)	271
MseI	TTAA	8 cut(s)	473, 642, 1230, 1620, 1740, 1748, 2069, 2595
MslI	CAYNNNNRTG	9 cut(s)	440, 1880, 2103, 2127, 2154, 2239, 2319, 2343, 2604
Msp20I	TGGCCA	1 cut(s)	271
MspA1I	CMGCKG	3 cut(s)	294, 947, 1316
MspI	CCGG	3 cut(s)	672, 1119, 1361
MspR9I	CCNGG	4 cut(s)	659, 1361, 1392, 2271
MunI	CAATTG	3 cut(s)	285, 465, 3204
Mva1269I	GAATGC	2 cut(s)	2246, 3149
MvaI	CCWGG	3 cut(s)	659, 1392, 2271
MvnI	CGCG	1 cut(s)	1706
NciI	CCSGG	1 cut(s)	1361
NcoI	CCATGG	3 cut(s)	339, 1405, 1770
NdeI	CATATG	2 cut(s)	280, 2970
NheI	GCTAGC	2 cut(s)	604, 2846
NlaIV	GGNNCC	3 cut(s)	588, 793, 3187
NmeAIII	GCCGAG	1 cut(s)	336
NmuCI	GTSAC	6 cut(s)	1084, 1139, 1241, 2291, 2586, 2804
NspI	RCATGY	6 cut(s)	2055, 2080, 2120, 2286, 3026, 3097
NspV	TTCGAA	2 cut(s)	412, 1380
PaeI	GCATGC	1 cut(s)	2080
PaeR7I	CTCGAG	1 cut(s)	530
PagI	TCATGA	1 cut(s)	160
PceI	AGGCCT	1 cut(s)	2248
PciI	ACATGT	1 cut(s)	2116
PciSI	GCTCTTC	2 cut(s)	1924, 2224
PctI	GAATGC	2 cut(s)	2246, 3149
PdmI	GAANNNNTTC	6 cut(s)	254, 681, 1386, 1476, 2520, 2832
PfeI	GAWTC	8 cut(s)	205, 912, 979, 1824, 2510, 2521, 2700, 3081
PflMI	CCANNNNNTGG	2 cut(s)	345, 783
PleI	GAGTC	5 cut(s)	242, 541, 754, 767, 2593
PpsI	GAGTC	5 cut(s)	242, 541, 754, 767, 2593
Ppu21I	YACGTR	1 cut(s)	995
PscI	ACATGT	1 cut(s)	2116
PshBI	ATTAAT	1 cut(s)	2595
Psp124BI	GAGCTC	2 cut(s)	2098, 2636
Psp6I	CCWGG	3 cut(s)	657, 1390, 2269
PspFI	CCCAGC	1 cut(s)	943
PspGI	CCWGG	3 cut(s)	657, 1390, 2269
PspN4I	GGNNCC	3 cut(s)	588, 793, 3187
PspPI	GGNCC	3 cut(s)	586, 949, 2450
PspXI	VCTCGAGB	1 cut(s)	530
PstI	CTGCAG	3 cut(s)	1588, 1657, 2333
PstNI	CAGNNNCTG	2 cut(s)	368, 1592
PsuI	RGATCY	2 cut(s)	1493, 2333
PvuII	CAGCTG	1 cut(s)	1316
RsaI	GTAC	6 cut(s)	463, 928, 1195, 1975, 2121, 3156
RsaNI	GTAC	6 cut(s)	462, 927, 1194, 1974, 2120, 3155
RseI	CAYNNNNRTG	9 cut(s)	440, 1880, 2103, 2127, 2154, 2239, 2319, 2343, 2604
SacI	GAGCTC	2 cut(s)	2098, 2636
SapI	GCTCTTC	2 cut(s)	1924, 2224
SaqAI	TTAA	8 cut(s)	473, 642, 1230, 1620, 1740, 1748, 2069, 2595
Sau96I	GGNCC	3 cut(s)	586, 949, 2450
ScaI	AGTACT	1 cut(s)	1975
SchI	GAGTC	5 cut(s)	243, 542, 755, 767, 2594
ScrFI	CCNGG	4 cut(s)	659, 1361, 1392, 2271
SduI	GDGCHC	5 cut(s)	1063, 2098, 2219, 2636, 2657
SfaNI	GCATC	7 cut(s)	413, 1555, 1783, 1794, 2243, 2875, 3110
SfcI	CTRYAG	6 cut(s)	828, 1512, 1584, 1653, 2329, 2406
Sfr274I	CTCGAG	1 cut(s)	530
SfuI	TTCGAA	2 cut(s)	412, 1380
SinI	GGWCC	2 cut(s)	949, 2450
SlaI	CTCGAG	1 cut(s)	530
SmiMI	CAYNNNNRTG	9 cut(s)	440, 1880, 2103, 2127, 2154, 2239, 2319, 2343, 2604
SmlI	CTYRAG	3 cut(s)	530, 1679, 1857
SmoI	CTYRAG	3 cut(s)	530, 1679, 1857
SphI	GCATGC	1 cut(s)	2080
SseBI	AGGCCT	1 cut(s)	2248
SsiI	CCGC	7 cut(s)	294, 608, 947, 974, 987, 1706, 2006
SspMI	CTAG	9 cut(s)	218, 537, 605, 953, 1997, 2250, 2466, 2847, 3174
SstI	GAGCTC	2 cut(s)	2098, 2636
StuI	AGGCCT	1 cut(s)	2248
StyD4I	CCNGG	4 cut(s)	657, 1359, 1390, 2269
StyI	CCWWGG	4 cut(s)	339, 762, 1405, 1770
TaiI	ACGT	2 cut(s)	997, 1942
TatI	WGTACW	4 cut(s)	926, 1973, 2119, 3154
TauI	GCSGC	2 cut(s)	297, 989
TfiI	GAWTC	8 cut(s)	205, 912, 979, 1824, 2510, 2521, 2700, 3081
Tru1I	TTAA	8 cut(s)	473, 642, 1230, 1620, 1740, 1748, 2069, 2595
Tru9I	TTAA	8 cut(s)	473, 642, 1230, 1620, 1740, 1748, 2069, 2595
TscAI	CASTG	8 cut(s)	459, 567, 606, 784, 823, 1563, 2662, 3040
TseFI	GTSAC	6 cut(s)	1084, 1139, 1241, 2291, 2586, 2804
Tsp45I	GTSAC	6 cut(s)	1084, 1139, 1241, 2291, 2586, 2804
TspGWI	ACGGA	1 cut(s)	1229
TspRI	CASTG	8 cut(s)	459, 567, 606, 784, 823, 1563, 2662, 3040
Van91I	CCANNNNNTGG	2 cut(s)	345, 783
VneI	GTGCAC	1 cut(s)	2653
VpaK11BI	GGWCC	2 cut(s)	949, 2450
VspI	ATTAAT	1 cut(s)	2595
XagI	CCTNNNNNAGG	2 cut(s)	1395, 2300
XapI	RAATTY	4 cut(s)	323, 1211, 1986, 2626
XceI	RCATGY	6 cut(s)	2055, 2080, 2120, 2286, 3026, 3097
XcmI	CCANNNNNNNNNTGG	2 cut(s)	346, 1306
XhoI	CTCGAG	1 cut(s)	530
XmnI	GAANNNNTTC	6 cut(s)	254, 681, 1386, 1476, 2520, 2832
XspI	CTAG	9 cut(s)	218, 537, 605, 953, 1997, 2250, 2466, 2847, 3174
ZrmI	AGTACT	1 cut(s)	1975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.