Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0001793

Physical Location & Seq

Genomic Coordinates Reverse (-)

18364064 .. 18367108

Gene Structure 3045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g21550.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGATTAGTGTGAAGACTACATCATTGGCTGAAGATTGTGCGGTCGCCAAAATGGCAAAACTTGTCGAAGAGGCTCAAAACAGCAAAACCAGAACTCAAAGATTCATTGACAAATGTGCAATGTTCTATACCCCAGCGGTCCTAGTCATATCTGTTTCTATCGCGGTGATTCCAGCTGCATTACATGTTCACAATTGGAGCAAGTGGTTTCACTTAGCTTTGGTTGTTTTGGTGAGCGCATGTCCATGCAGTCTCATCCTCTCTACACCCATTGTGACTTTCTGCACGCTCACAAAAGCGGCAACATCTGGACTTCTGATCAAAGGAGGTGACTACATTGAGATTCTTGCTAAAGTCAAGATCATGGCTTTTGACAAAACTGGTACAATAACAAGGGGTGAATTTGTGGTGATGGATTTTCAATCTCTCCGTGATGACATTAGCTTGAACACATTGCTTTACTGGGTTTCAAGCATTGAGAGGAAGTCAAGTCATCCAATGGCAGATGCGCTGGTTGACTATGGAAGATCGCTTTCGGTTGAGCCAAAACCTGAAAATGTGGAGGAGTTTCAAAATTTTCCCGGGGAAGGTATTCATGGGAAAATTGATGGACAAGATATCTACATTGGAAACAGAAAAATTGCTTTGAGAGCTGCTTGTGAAATAATTCCAACAATTGAAGGTTCTAAAGGTGGGAAGACGATTGGTTACATATACTCTGGGGGAACCCCCGCTGGAGTCTTTACAATATCTGATGCTTGTCGATCTGGGGCTGCAGAGGCTGTCAAGGAGCTAAAGAAGTTAGGCATTAAAACAGCTCTGCTCACAGGAGACAGTAATGCTGCCGCATTACATACAAATGAGCAGCTTAAGCAAGCTCTCGAGGTAGTCCATGCGGAACTTCTACCTGAAGACAAGGCAAGAATCATTAAAGAATTTAAAATGGAAGGAAATACAGCAATGATTGGAGACGGTATCAATGATGCCCCTGCTTTAGCCACAGCCGATATTGGTATCTCAATGGGCATTTCAGGATCAGCCCTTGCTCAAGAAACTGGGAATATAATTTTACTGTCAAATGACGTTAGGAAACTACCGAAAGCAGTCCAACTTGCGAGAAGAGCTAATAGAAAAGTGATTGAGAATGTGGTTTTGTCAATCACTACTAAGGTCAGTATCCTTGCACTGGGATTTGCAGGGCATCCACTCGTTTGGGCTGCAGTTCTTGCTGATGTCGGGACATGCATGCTTGTGATATTCAACAGCATGCTACTCTTACGAGGAACCCACAAGCATGGAGGGAAAACTTCTGCACCACATGGCCATAAACATGGAAGCCATGGACATAGCCATTCTCACAAAAACCAACATTGTTGCTCGGACAGCAAACCCTTAAAAGCAGCCTGTAAACTTCAAAAATGTTCCTCGCAGAAATGTGGATCAGAGTGCCAGCCTAGTCCCTTAAATTCAAGCTTTCCCTGTAAACTTAAGTGCAGTGACTTACATGAGGCACAGCACTGTGATGAAACAAGCTGCACCAAAGTCAATCATGATCTCGAGTCACAGAATAAACACAATCATGGTTGTTTGAGTCATCATAATTTGAGCTCATGCGCAGAAGGTGATAAACTTTACGAGGCAAAACACTGCAATCATTCTGCTTCTTCTTTGGTGGAAATTAAGAAGTTGACAAGTCAAGGTCATTGCCACTCGACCCACTGCGGCAAAGAGCACAACAGAAAAGAAGATGATGGAGTCCATGAGGAAAAACACTGCAATTATTCCGCTTTTGCTTTGCCCAAAAGCGAAAAATTGACAAGTGGTGTTCATTGGCACTCAAGCCACAGTGGAAAGGAGCATAGTATAATGGAAGGTGATGCAATCCATGAGCCAAAACACTGCAACCATTCTACTTTTTCCTCGGAGGAAAGCAGAAAGTTGACAAGTACTGGTCATTGCCACTCAACTCATTGTGGCAATGATTATATTCACAATGAATCGTTAGGAGAAACGTTTGCCACAAGATGTGATCATCAGAACCACCATAATCAAGATAAACAATCACCCCCTCATACGACGATTGACATTGTAGCGGGTTGCGACCACACAGAATCAGCCGCAACGAATTCTTGCATTCGCTCCCGGACAGCGGAAAAGGAAGCATGTTGCTCGGAATTAGTAGCAATTCATGCTTGTGTGTTGGAGAAAAGAGAAGTCGGTGGGTGTTGCAAAAGCTACATGAAGGAATGCTGTGGTGGTCATGTGCATCTTGGTTCTAGCTTTCAAGGTTGTTTATCAGAAATCACAATTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006950 GO:0008150 GO:0009506 GO:0009636 GO:0010035 GO:0010038 GO:0010043 GO:0015691 GO:0016020 GO:0030001 GO:0030054 GO:0031090 GO:0032025 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0061687 GO:0065007 GO:0065008 GO:0070838 GO:0071585 GO:0071944 GO:0072507 GO:0072511 GO:0097501 GO:0098588 GO:0098754 GO:0098771 GO:0098805 GO:1990170

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

772

Amino Acids

83.47

Weight (kDa)

7.07

Isoelectric Point (pI)

41.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19110 AT2G19110 AT2G19110 AT4G30110 AT4G30110 AT4G30120 AT4G30120
fragaria_vesca	FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520
malus_domestica	MD00G1104400.v1.1 MD01G1183400.v1.1 MD01G1183700.v1.1 MD01G1184000.v1.1 MD01G1184300.v1.1 MD13G1244500.v1.1 MD16G1252700.v1.1
prunus_persica	Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1
pyrus_communis	pycom13g21550 pycom16g21330
rosa_chinensis	RchiOBHm_Chr2g0143431 RchiOBHm_Chr4g0400101
rosa_laevigata	RLG00000009214 RLG00000020035
rosa_multiflora	Rmu_sc0000037.1_g000006
rosa_roxburghii	Rroxscaffold_2G00101850 Rroxscaffold_5G00345040 Rroxscaffold_5G00345070
rosa_rugosa	Rorug02G0381400 Rorug04G0022600 Rorug04G0022600
rosa_samantha	Rh2AG434400 Rh2BG442200 Rh2CG420300 Rh2DG452400 Rh4BG096400 Rh4CG107500 Rh4DG093000
rosa_wichuraiana	Rw2G035400 Rw4G008180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1615
AccII	CGCG	1 cut(s)	164
AclI	AACGTT	1 cut(s)	2012
AclWI	GGATC	2 cut(s)	1042, 1447
AcoI	YGGCCR	1 cut(s)	1321
AcsI	RAATTY	5 cut(s)	401, 574, 935, 1465, 2125
AcuI	CTGAAG	2 cut(s)	51, 930
AfaI	GTAC	2 cut(s)	385, 1948
AfiI	CCNNNNNNNGG	3 cut(s)	587, 1186, 2149
AflII	CTTAAG	2 cut(s)	869, 1487
AflIII	ACRYGT	1 cut(s)	184
Alw21I	GWGCWC	2 cut(s)	1610, 1734
Alw26I	GTCTC	3 cut(s)	257, 825, 963
AlwI	GGATC	2 cut(s)	1042, 1447
AlwNI	CAGNNNCTG	1 cut(s)	782
Ama87I	CYCGRG	3 cut(s)	581, 881, 1556
AoxI	GGCC	1 cut(s)	1321
ApeKI	GCWGC	8 cut(s)	176, 653, 773, 842, 865, 1217, 1400, 1533
ApoI	RAATTY	5 cut(s)	401, 574, 935, 1465, 2125
Asp700I	GAANNNNTTC	2 cut(s)	591, 666
AspLEI	GCGC	3 cut(s)	239, 511, 1616
AspS9I	GGNCC	1 cut(s)	139
AsuC2I	CCSGG	3 cut(s)	582, 583, 2143
AsuHPI	GGTGA	8 cut(s)	178, 244, 341, 410, 421, 1634, 1886, 2055
AvaI	CYCGRG	3 cut(s)	581, 881, 1556
AvaII	GGWCC	1 cut(s)	139
BalI	TGGCCA	1 cut(s)	1323
BanII	GRGCYC	1 cut(s)	1610
BbsI	GAAGAC	3 cut(s)	20, 704, 918
Bbv12I	GWGCWC	2 cut(s)	1610, 1734
BbvI	GCAGC	8 cut(s)	163, 640, 760, 829, 877, 1204, 1412, 1520
BccI	CCATC	3 cut(s)	406, 602, 1745
BcgI	CGANNNNNNTGC	2 cut(s)	2151, 2185
BciVI	GTATCC	1 cut(s)	1187
BclI	TGATCA	2 cut(s)	318, 2029
BcnI	CCSGG	3 cut(s)	582, 583, 2143
BcoDI	GTCTC	3 cut(s)	257, 825, 963
BfaI	CTAG	3 cut(s)	143, 1455, 2277
BfmI	CTRYAG	2 cut(s)	774, 1218
BfrI	CTTAAG	2 cut(s)	869, 1487
BfuI	GTATCC	1 cut(s)	1187
BglI	GCCNNNNNGGC	1 cut(s)	53
BmcAI	AGTACT	1 cut(s)	1948
Bme1390I	CCNGG	3 cut(s)	582, 583, 2143
Bme18I	GGWCC	1 cut(s)	139
BmeT110I	CYCGRG	3 cut(s)	581, 881, 1556
BmgT120I	GGNCC	1 cut(s)	139
BmiI	GGNNCC	2 cut(s)	727, 1285
BmrFI	CCNGG	3 cut(s)	582, 583, 2143
BmrI	ACTGGG	3 cut(s)	472, 1065, 1196
BmsI	GCATC	6 cut(s)	496, 745, 973, 1210, 1867, 2275
BmuI	ACTGGG	3 cut(s)	472, 1065, 1196
BpiI	GAAGAC	3 cut(s)	20, 704, 918
BpmI	CTGGAG	1 cut(s)	756
BpuEI	CTTGAG	2 cut(s)	1032, 1822
BpuMI	CCSGG	3 cut(s)	582, 583, 2143
BsaJI	CCNNGG	4 cut(s)	581, 582, 1339, 1920
Bsc4I	CCNNNNNNNGG	3 cut(s)	587, 1186, 2149
Bse1I	ACTGG	5 cut(s)	385, 467, 1060, 1191, 1954
Bse3DI	GCAATG	6 cut(s)	126, 452, 966, 1702, 1954, 1984
BseDI	CCNNGG	4 cut(s)	581, 582, 1339, 1920
BseGI	GGATG	3 cut(s)	255, 493, 1201
BseLI	CCNNNNNNNGG	3 cut(s)	587, 1186, 2149
BseMI	GCAATG	6 cut(s)	126, 452, 966, 1702, 1954, 1984
BseNI	ACTGG	5 cut(s)	385, 467, 1060, 1191, 1954
BseRI	GAGGAG	1 cut(s)	578
BseXI	GCAGC	8 cut(s)	163, 640, 760, 829, 877, 1204, 1412, 1520
BseYI	CCCAGC	1 cut(s)	133
BsgI	GTGCAG	4 cut(s)	268, 1296, 1513, 1519
Bsh1236I	CGCG	1 cut(s)	164
Bsh1285I	CGRYCG	1 cut(s)	45
BshFI	GGCC	1 cut(s)	1323
BsiEI	CGRYCG	1 cut(s)	45
BsiHKAI	GWGCWC	2 cut(s)	1610, 1734
BsiHKCI	CYCGRG	3 cut(s)	581, 881, 1556
BsiSI	CCGG	2 cut(s)	582, 2143
BslFI	GGGAC	2 cut(s)	1252, 1443
BslI	CCNNNNNNNGG	3 cut(s)	587, 1186, 2149
BsmAI	GTCTC	3 cut(s)	257, 825, 963
BsmBI	CGTCTC	1 cut(s)	963
BsmFI	GGGAC	2 cut(s)	1252, 1443
BsmI	GAATGC	2 cut(s)	2133, 2252
BsnI	GGCC	1 cut(s)	1323
BsoBI	CYCGRG	3 cut(s)	581, 881, 1556
Bsp1286I	GDGCHC	2 cut(s)	1610, 1734
Bsp143I	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
Bsp19I	CCATGG	1 cut(s)	1339
BspANI	GGCC	1 cut(s)	1323
BspFNI	CGCG	1 cut(s)	164
BspHI	TCATGA	1 cut(s)	1549
BspLI	GGNNCC	2 cut(s)	727, 1285
BspMAI	CTGCAG	2 cut(s)	778, 1222
BspPI	GGATC	2 cut(s)	1042, 1447
BspQI	GCTCTTC	1 cut(s)	1114
BspTI	CTTAAG	2 cut(s)	869, 1487
BsrDI	GCAATG	6 cut(s)	126, 452, 966, 1702, 1954, 1984
BsrI	ACTGG	5 cut(s)	385, 467, 1060, 1191, 1954
BssECI	CCNNGG	4 cut(s)	581, 582, 1339, 1920
BssMI	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
BssT1I	CCWWGG	1 cut(s)	1339
Bst4CI	ACNGT	5 cut(s)	836, 974, 1074, 1520, 1847
Bst6I	CTCTTC	2 cut(s)	63, 1114
BstAFI	CTTAAG	2 cut(s)	869, 1487
BstAPI	GCANNNNNTGC	2 cut(s)	1226, 2189
BstC8I	GCNNGC	5 cut(s)	287, 876, 1247, 1268, 1451
BstDEI	CTNAG	2 cut(s)	214, 1167
BstDSI	CCRYGG	1 cut(s)	1339
BstF5I	GGATG	3 cut(s)	255, 493, 1201
BstFNI	CGCG	1 cut(s)	164
BstHHI	GCGC	3 cut(s)	239, 511, 1616
BstKTI	GATC	8 cut(s)	321, 363, 530, 767, 1037, 1442, 1555, 2032
BstMAI	GTCTC	3 cut(s)	257, 825, 963
BstMBI	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
BstMCI	CGRYCG	1 cut(s)	45
BstMWI	GCNNNNNNNGC	8 cut(s)	53, 650, 779, 871, 1121, 1226, 1383, 2189
BstNSI	RCATGY	6 cut(s)	188, 243, 1245, 1249, 1270, 2166
BstSCI	CCNGG	3 cut(s)	580, 581, 2141
BstSFI	CTRYAG	2 cut(s)	774, 1218
BstUI	CGCG	1 cut(s)	164
BstV1I	GCAGC	8 cut(s)	163, 640, 760, 829, 877, 1204, 1412, 1520
BstV2I	GAAGAC	3 cut(s)	20, 704, 918
BstXI	CCANNNNNNTGG	3 cut(s)	1212, 1295, 1331
BsuI	GTATCC	1 cut(s)	1187
BsuRI	GGCC	1 cut(s)	1323
BtgI	CCRYGG	1 cut(s)	1339
BtsCI	GGATG	3 cut(s)	255, 493, 1201
BtsI	GCAGTG	5 cut(s)	1501, 1645, 1717, 1771, 1897
BtsIMutI	CAGTG	8 cut(s)	1184, 1501, 1516, 1645, 1717, 1771, 1852, 1897
Cac8I	GCNNGC	5 cut(s)	287, 876, 1247, 1268, 1451
CaiI	CAGNNNCTG	1 cut(s)	782
CciI	TCATGA	1 cut(s)	1549
CfoI	GCGC	3 cut(s)	239, 511, 1616
Cfr13I	GGNCC	1 cut(s)	139
Cfr9I	CCCGGG	1 cut(s)	581
Csp6I	GTAC	2 cut(s)	384, 1947
CviQI	GTAC	2 cut(s)	384, 1947
DdeI	CTNAG	2 cut(s)	214, 1167
DpnI	GATC	8 cut(s)	320, 362, 529, 766, 1036, 1441, 1554, 2031
DpnII	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
DraI	TTTAAA	1 cut(s)	940
EaeI	YGGCCR	1 cut(s)	1321
Eam1104I	CTCTTC	2 cut(s)	63, 1114
EarI	CTCTTC	2 cut(s)	63, 1114
Ecl136II	GAGCTC	1 cut(s)	1608
Eco130I	CCWWGG	1 cut(s)	1339
Eco24I	GRGCYC	1 cut(s)	1610
Eco32I	GATATC	1 cut(s)	619
Eco47I	GGWCC	1 cut(s)	139
Eco53kI	GAGCTC	1 cut(s)	1608
Eco57I	CTGAAG	2 cut(s)	51, 930
Eco88I	CYCGRG	3 cut(s)	581, 881, 1556
EcoICRI	GAGCTC	1 cut(s)	1608
EcoRI	GAATTC	1 cut(s)	2125
EcoRV	GATATC	1 cut(s)	619
EcoT14I	CCWWGG	1 cut(s)	1339
EcoT22I	ATGCAT	1 cut(s)	1247
EcoT38I	GRGCYC	1 cut(s)	1610
ErhI	CCWWGG	1 cut(s)	1339
Esp3I	CGTCTC	1 cut(s)	963
FaqI	GGGAC	2 cut(s)	1252, 1443
FauI	CCCGC	2 cut(s)	739, 2086
FbaI	TGATCA	2 cut(s)	318, 2029
FokI	GGATG	3 cut(s)	242, 480, 1188
FriOI	GRGCYC	1 cut(s)	1610
FspBI	CTAG	3 cut(s)	143, 1455, 2277
FspI	TGCGCA	1 cut(s)	1615
GlaI	GCGC	3 cut(s)	238, 510, 1615
GsaI	CCCAGC	1 cut(s)	137
GsuI	CTGGAG	1 cut(s)	756
HaeIII	GGCC	1 cut(s)	1323
HapII	CCGG	2 cut(s)	582, 2143
HhaI	GCGC	3 cut(s)	239, 511, 1616
Hin6I	GCGC	3 cut(s)	237, 509, 1614
HinP1I	GCGC	3 cut(s)	237, 509, 1614
HincII	GTYRAC	3 cut(s)	517, 1689, 1941
HindII	GTYRAC	3 cut(s)	517, 1689, 1941
HindIII	AAGCTT	1 cut(s)	1471
HpaII	CCGG	2 cut(s)	582, 2143
HphI	GGTGA	8 cut(s)	178, 244, 341, 410, 421, 1634, 1886, 2055
Hpy166II	GTNNAC	6 cut(s)	190, 517, 1409, 1484, 1689, 1941
Hpy188I	TCNGA	8 cut(s)	318, 754, 1381, 1444, 1924, 2037, 2173, 2299
Hpy188III	TCNNGA	9 cut(s)	309, 358, 881, 1032, 1049, 1237, 1550, 1556, 2051
Hpy8I	GTNNAC	6 cut(s)	190, 517, 1409, 1484, 1689, 1941
Hpy99I	CGWCG	1 cut(s)	2080
HpyAV	CCTTC	6 cut(s)	581, 674, 941, 1613, 1865, 2236
HpyCH4III	ACNGT	5 cut(s)	836, 974, 1074, 1520, 1847
HpyCH4IV	ACGT	2 cut(s)	1083, 2012
HpyF10VI	GCNNNNNNNGC	8 cut(s)	53, 650, 779, 871, 1121, 1226, 1383, 2189
HpyF3I	CTNAG	2 cut(s)	214, 1167
HpySE526I	ACGT	2 cut(s)	1083, 2012
HspAI	GCGC	3 cut(s)	237, 509, 1614
Ksp22I	TGATCA	2 cut(s)	318, 2029
Kzo9I	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
LguI	GCTCTTC	1 cut(s)	1114
LmnI	GCTCC	4 cut(s)	198, 790, 1855, 2144
Lsp1109I	GCAGC	8 cut(s)	163, 640, 760, 829, 877, 1204, 1412, 1520
LweI	GCATC	6 cut(s)	496, 745, 973, 1210, 1867, 2275
MaeI	CTAG	3 cut(s)	143, 1455, 2277
MaeII	ACGT	2 cut(s)	1083, 2012
MaeIII	GTNAC	5 cut(s)	274, 329, 707, 1496, 1560
MalI	GATC	8 cut(s)	320, 362, 529, 766, 1036, 1441, 1554, 2031
MboI	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
MboII	GAAGA	9 cut(s)	25, 44, 80, 537, 709, 923, 1131, 1656, 1757
MfeI	CAATTG	3 cut(s)	193, 675, 2307
MhlI	GDGCHC	2 cut(s)	1610, 1734
MlsI	TGGCCA	1 cut(s)	1323
MluNI	TGGCCA	1 cut(s)	1323
MlyI	GAGTC	4 cut(s)	747, 1568, 1600, 1764
MmeI	TCCRAC	3 cut(s)	695, 1132, 2181
Mox20I	TGGCCA	1 cut(s)	1323
Mph1103I	ATGCAT	1 cut(s)	1247
MroXI	GAANNNNTTC	2 cut(s)	591, 666
MscI	TGGCCA	1 cut(s)	1323
MseI	TTAA	8 cut(s)	810, 870, 930, 939, 1394, 1463, 1488, 1680
MslI	CAYNNNNRTG	8 cut(s)	244, 858, 1250, 1293, 1329, 1521, 1578, 2193
Msp20I	TGGCCA	1 cut(s)	1323
MspA1I	CMGCKG	4 cut(s)	137, 176, 734, 2150
MspCI	CTTAAG	2 cut(s)	869, 1487
MspI	CCGG	2 cut(s)	582, 2143
MspR9I	CCNGG	3 cut(s)	582, 583, 2143
MunI	CAATTG	3 cut(s)	193, 675, 2307
Mva1269I	GAATGC	2 cut(s)	2133, 2252
MvnI	CGCG	1 cut(s)	164
MwoI	GCNNNNNNNGC	8 cut(s)	53, 650, 779, 871, 1121, 1226, 1383, 2189
NciI	CCSGG	3 cut(s)	582, 583, 2143
NcoI	CCATGG	1 cut(s)	1339
NdeII	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
NlaIV	GGNNCC	2 cut(s)	727, 1285
NmuCI	GTSAC	4 cut(s)	274, 329, 1496, 1560
NsbI	TGCGCA	1 cut(s)	1615
NsiI	ATGCAT	1 cut(s)	1247
NspI	RCATGY	6 cut(s)	188, 243, 1245, 1249, 1270, 2166
PaeI	GCATGC	2 cut(s)	1249, 1270
PaeR7I	CTCGAG	2 cut(s)	881, 1556
PagI	TCATGA	1 cut(s)	1549
PciI	ACATGT	1 cut(s)	184
PciSI	GCTCTTC	1 cut(s)	1114
PctI	GAATGC	2 cut(s)	2133, 2252
PdmI	GAANNNNTTC	2 cut(s)	591, 666
PfeI	GAWTC	6 cut(s)	102, 169, 343, 924, 1997, 2111
PfoI	TCCNGGA	1 cut(s)	2141
PleI	GAGTC	4 cut(s)	746, 1567, 1599, 1763
PpsI	GAGTC	4 cut(s)	746, 1567, 1599, 1763
PscI	ACATGT	1 cut(s)	184
Psp124BI	GAGCTC	1 cut(s)	1610
Psp1406I	AACGTT	1 cut(s)	2012
PspFI	CCCAGC	1 cut(s)	133
PspN4I	GGNNCC	2 cut(s)	727, 1285
PspPI	GGNCC	1 cut(s)	139
PstI	CTGCAG	2 cut(s)	778, 1222
PstNI	CAGNNNCTG	1 cut(s)	782
PvuII	CAGCTG	1 cut(s)	176
RsaI	GTAC	2 cut(s)	385, 1948
RsaNI	GTAC	2 cut(s)	384, 1947
RseI	CAYNNNNRTG	8 cut(s)	244, 858, 1250, 1293, 1329, 1521, 1578, 2193
SacI	GAGCTC	1 cut(s)	1610
SapI	GCTCTTC	1 cut(s)	1114
SaqAI	TTAA	8 cut(s)	810, 870, 930, 939, 1394, 1463, 1488, 1680
Sau3AI	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
Sau96I	GGNCC	1 cut(s)	139
ScaI	AGTACT	1 cut(s)	1948
SchI	GAGTC	4 cut(s)	747, 1568, 1600, 1764
ScrFI	CCNGG	3 cut(s)	582, 583, 2143
SduI	GDGCHC	2 cut(s)	1610, 1734
SfaNI	GCATC	6 cut(s)	496, 745, 973, 1210, 1867, 2275
SfcI	CTRYAG	2 cut(s)	774, 1218
Sfr274I	CTCGAG	2 cut(s)	881, 1556
SinI	GGWCC	1 cut(s)	139
SlaI	CTCGAG	2 cut(s)	881, 1556
SmaI	CCCGGG	1 cut(s)	583
SmiMI	CAYNNNNRTG	8 cut(s)	244, 858, 1250, 1293, 1329, 1521, 1578, 2193
SmlI	CTYRAG	6 cut(s)	869, 881, 1047, 1487, 1556, 1837
SmoI	CTYRAG	6 cut(s)	869, 881, 1047, 1487, 1556, 1837
SphI	GCATGC	2 cut(s)	1249, 1270
SspMI	CTAG	3 cut(s)	143, 1455, 2277
SstI	GAGCTC	1 cut(s)	1610
StyD4I	CCNGG	3 cut(s)	580, 581, 2141
StyI	CCWWGG	1 cut(s)	1339
TaaI	ACNGT	5 cut(s)	836, 974, 1074, 1520, 1847
TaiI	ACGT	2 cut(s)	1086, 2015
TaqI	TCGA	5 cut(s)	66, 763, 882, 1557, 1712
TatI	WGTACW	1 cut(s)	1946
TauI	GCSGC	4 cut(s)	302, 848, 1725, 2120
TfiI	GAWTC	6 cut(s)	102, 169, 343, 924, 1997, 2111
Tru1I	TTAA	8 cut(s)	810, 870, 930, 939, 1394, 1463, 1488, 1680
Tru9I	TTAA	8 cut(s)	810, 870, 930, 939, 1394, 1463, 1488, 1680
TscAI	CASTG	8 cut(s)	1191, 1501, 1523, 1652, 1724, 1778, 1852, 1904
TseFI	GTSAC	4 cut(s)	274, 329, 1496, 1560
TseI	GCWGC	8 cut(s)	176, 653, 773, 842, 865, 1217, 1400, 1533
Tsp45I	GTSAC	4 cut(s)	274, 329, 1496, 1560
TspDTI	ATGAA	7 cut(s)	94, 584, 1539, 1817, 2010, 2177, 2255
TspGWI	ACGGA	1 cut(s)	419
TspMI	CCCGGG	1 cut(s)	581
TspRI	CASTG	8 cut(s)	1191, 1501, 1523, 1652, 1724, 1778, 1852, 1904
Vha464I	CTTAAG	2 cut(s)	869, 1487
VpaK11BI	GGWCC	1 cut(s)	139
XapI	RAATTY	5 cut(s)	401, 574, 935, 1465, 2125
XceI	RCATGY	6 cut(s)	188, 243, 1245, 1249, 1270, 2166
XhoI	CTCGAG	2 cut(s)	881, 1556
XmaI	CCCGGG	1 cut(s)	581
XmnI	GAANNNNTTC	2 cut(s)	591, 666
XspI	CTAG	3 cut(s)	143, 1455, 2277
ZrmI	AGTACT	1 cut(s)	1948
Zsp2I	ATGCAT	1 cut(s)	1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.