Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001793

Physical Location & Seq

Genomic Coordinates Reverse (-)

20048151 .. 20058710

Gene Structure 10560 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG107500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGAAAGGCATAGCATCCATTCGAAATCTGAGGCTTGACATCAACATCCTTATGATTGTTGCAGTGATTGGTACAATTGCTCTGAATGATTATCTGGAAGCTGGCACTATTGTCTTTCTCTTCACCATCGCAGAGTGGCTTGAGTCAAGGGCAGGGCACAAGGCAAAAGCAGTGATGTCATCGTTGATGAGTATGGCCCCTCAGAAAGCAGTGTTAGCGGATACAGGAGAAGTTGTGGATGTTGATGAGGTTAAGTTAAACACACTTCTTGCTGTGAAGGCCGGTGAAGTTATTCCCATTGATGGAATAGTTGTTGATGGCAAAGGTGAGGTGGATGAGAAAACACTAACAGGAGAGTCATATCCAGTTACCAAGGAAAAGGACTCCACTGTTTGGGCTGGCACCGTCAATCTCAATGGTTATATTACTGTGAAAACTACAGCCTTAGCTGAAGACTGTGTGGTTGCTGAAATGTCTAAACTGGTGGAGGAGGCTCAAAACAGCAAAACCCGAACTGAGAGATTCATTGATAAGTGTGCAAAGTTTTATACTCCAGCGGTCCTAGTCATATCGATTTCTATTGCAGCGATACCAGCTGCATTACGTGTTCATAATTGGAGCAAATGGTTTCACTTGGCTTTGGTTGTTTTAGTAAGTGCTTGTCCGTGTGCACTCATCCTCTCTACACCAGTTGTGACTTTCTGCACACTTACAAAAGCAGCAACTTCTGGTCTTTTGATCAAAGGGGGTGACTTCATTGAGATTCTTGCTAAAGTCAAAATCATGGCTTTTGACAAAACTGGTACTATAACAAGGGGTGAATTTGTGGTGATGGATTTTCAATCTCTCCGTGACGACATTAGCTTGAACACTTTGATTTACTGGGTTTCAAGCATTGAGAGGAAGGCTAGTCATCCAATGGCAGCGGCTCTTGTTGATTACGGAAGATCATTTTCAATTGAGCCAAACCCTGAAAATGTGGAGAACTTCGAAAACTTTCCTGGGGAAGGCATCCATGGAAAGATTGATGGACAAGATATTTATATTGGAAGCAAAAGAATAGCTTTGAGAGCGTCTTGTGAAACAATTCCAACCATTGAAGGATCTACGGGTGGCAAGACTATAGGGTACATATACTGTGAACGAACCCCTGCTGGGGTCTTTACACTGTCTGATGCCTGTCGAACTGGGGCTGCAGATGCTGTTAGGGAGCTGAAGAAATTGGGTATTAAAACAGCCATGCTTACTGGAGATAGCCATGCCGCAGCTACGCAAGCAAATGAGCAGCTTGAGCAAGCTCTGGATGTAGTGCACGCAGAACTTCTTCCTGAAGACAAGGCAAAAATCATTAAAGAATTTAAAATGGAAGGAAACATAGCCATGGTTGGGGATGGCATCAACGATGCCCCTGCTTTGGCCACAGCTGATATTGGTATCTCGATGGGCATTTCAGGGTCAGCCCTTGCTCAAGACACTGGGAATATCATTTTAATGTCAAATGATGTCAGGAAACTACCGAAGGCAATCCAGCTTGCAAGAAGAGCCAAACGAAAAGTGATTGAGAATGTGATCTTATCAATCAGTACTAAAGTTGGTATTCTTGCACTGGCATTTGCAGGACATCCACTTGTTTGGGCAGCAGTTCTTGCAGATGTTGGGACATGCTTGCTTGTGATATTGAACAGCATGCTACTTTTGCAAGGAACTCACAGGCATGGAGAGAAACATGTACATAATCATGGAAAACAAGAACACAGCCACTCTCACAGAAACCAGAAGTGTTTCTCTGACCAAAAAGTTGCAGAAGCGTGCAAGTCTCAAAGATGTGCTTCTCAGAGGTGCGAATCAGAATGCAGGCCTAGTTCTAATTCGAGCTTGCCTGGCAATCATAAATACAGTAGTGACTTACATGAGGCAAAGCACCATGATCATGGAAGCTGCAGATCTCATAACCATGGAAGCAATAGGCAAAACCACACTCACACAAACCAGCATCGTTGCTCGGAAAGCAAAACTGTAGTAGCGTGTGAACCTCCAAAGTGTTCTTCTCAGAGTTGTGGATCAGACTGCCAGCCTAGTCCTCTGAAGGCAAGCTTGGCTGACAATTGTAAGTGTGAGGGTTCGGAGGAGATTCACAGTTGCCCAAGAAATGATGACTTGCATGAGGCAAAGAACTGTGATAATCATGATCTGGAGTCACAAATTAATCACAAGCATGGCTGTTTGCAGACTGAAAATTTCAGCTCATGTGAAGATCATGGGTGCACTCACTTGACTGTAAGGCATGGTCATGGTAGTTGTGGAGAGAGTCATGGAATCCATGAGAAAAAAGACTGCAACCACCATTCTGCTGCTTCTTTGGAGGAAAATTGGAGATCAAAGAGTATCGATCATTGCCACTCAAGTCATTGTGACAAAGAACATAGCAGCAATGAAGCTTCTGAACAAATAGCTAGAACAAGCTGTGAGGAGCATCATCATCATCATCAACAACATCAGCATTATCATCATCAAGATCAAAAATCACCTCCTCATATGACTATCGATATTGTGCAGAGTAGTAACCACACAGAATCAGCGTCCCCACATCCTTGCCTCAGCTTAGGAACAAGGGGAAATGAGGTGTGTTGTTCACAACCGATGGCCTGTATGTTGGAAAAAAGAGAATTTGGTGGATGCTGCAAAAGCTACATGAAGGAATGCTGTAGTGGACATGGACCTATTGAATCTAGCTATCAAGTTAGCAAAGTAACAATTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006950 GO:0008150 GO:0009506 GO:0009636 GO:0010035 GO:0010038 GO:0010043 GO:0015691 GO:0016020 GO:0030001 GO:0030054 GO:0031090 GO:0032025 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0061687 GO:0065007 GO:0065008 GO:0070838 GO:0071585 GO:0071944 GO:0072507 GO:0072511 GO:0097501 GO:0098588 GO:0098754 GO:0098771 GO:0098805 GO:1990170

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

920

Amino Acids

100.2

Weight (kDa)

6.33

Isoelectric Point (pI)

42.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	73 - 163	1.4e-21	P-type ATPase actuator domain
Hydrolase	PF00702	259 - 476	1.2e-26	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19110 AT2G19110 AT2G19110 AT4G30110 AT4G30110 AT4G30120 AT4G30120
fragaria_vesca	FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520
malus_domestica	MD00G1104400.v1.1 MD01G1183400.v1.1 MD01G1183700.v1.1 MD01G1184000.v1.1 MD01G1184300.v1.1 MD13G1244500.v1.1 MD16G1252700.v1.1
prunus_persica	Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1
pyrus_communis	pycom13g21550 pycom16g21330
rosa_chinensis	RchiOBHm_Chr2g0143431 RchiOBHm_Chr4g0400101
rosa_laevigata	RLG00000009214 RLG00000020035
rosa_multiflora	Rmu_sc0000037.1_g000006
rosa_roxburghii	Rroxscaffold_2G00101850 Rroxscaffold_5G00345040 Rroxscaffold_5G00345070
rosa_rugosa	Rorug02G0381400 Rorug04G0022600 Rorug04G0022600
rosa_samantha	Rh2AG434400 Rh2BG442200 Rh2CG420300 Rh2DG452400 Rh4BG096400 Rh4CG107500 Rh4DG093000
rosa_wichuraiana	Rw2G035400 Rw4G008180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	401
AccB7I	CCANNNNNTGG	1 cut(s)	393
AciI	CCGC	4 cut(s)	218, 557, 926, 1263
AclWI	GGATC	2 cut(s)	1111, 2068
AcoI	YGGCCR	1 cut(s)	1416
AcsI	RAATTY	4 cut(s)	821, 1355, 2236, 2666
AcuI	CTGAAG	4 cut(s)	471, 1235, 1350, 2105
AfaI	GTAC	5 cut(s)	73, 805, 1130, 1585, 1731
AfiI	CCNNNNNNNGG	7 cut(s)	302, 393, 1007, 1155, 1156, 1386, 1414
AflIII	ACRYGT	2 cut(s)	604, 1726
AgsI	TTSAA	8 cut(s)	842, 868, 891, 957, 1100, 1681, 2726, 2759
AjnI	CCWGG	2 cut(s)	1000, 1879
AjuI	GAANNNNNNNTTGG	4 cut(s)	2029, 2061, 2078, 2110
Alw21I	GWGCWC	3 cut(s)	673, 1314, 2267
Alw26I	GTCTC	1 cut(s)	1821
Alw44I	GTGCAC	3 cut(s)	669, 1310, 2263
AlwI	GGATC	2 cut(s)	1111, 2068
AlwNI	CAGNNNCTG	1 cut(s)	1202
AoxI	GGCC	5 cut(s)	195, 279, 1416, 1856, 2643
ApaLI	GTGCAC	3 cut(s)	669, 1310, 2263
ApoI	RAATTY	4 cut(s)	821, 1355, 2236, 2666
AseI	ATTAAT	1 cut(s)	2205
Asp700I	GAANNNNTTC	5 cut(s)	291, 996, 1086, 1323, 1781
AspS9I	GGNCC	3 cut(s)	196, 559, 2717
AsuHPI	GGTGA	7 cut(s)	115, 296, 338, 761, 830, 841, 2517
AsuII	TTCGAA	2 cut(s)	22, 990
AvaII	GGWCC	2 cut(s)	559, 2717
BaeGI	GKGCMC	4 cut(s)	159, 673, 1314, 2267
BalI	TGGCCA	1 cut(s)	1418
BanI	GGYRCC	1 cut(s)	401
BbsI	GAAGAC	2 cut(s)	459, 1338
Bbv12I	GWGCWC	3 cut(s)	673, 1314, 2267
BbvCI	CCTCAGC	1 cut(s)	2597
BccI	CCATC	8 cut(s)	134, 296, 311, 826, 1022, 1385, 1435, 2635
BcgI	CGANNNNNNTGC	2 cut(s)	1391, 1425
BciT130I	CCWGG	2 cut(s)	1002, 1881
BciVI	GTATCC	1 cut(s)	214
BclI	TGATCA	2 cut(s)	738, 1927
BcoDI	GTCTC	1 cut(s)	1821
BfaI	CTAG	6 cut(s)	563, 909, 1860, 2076, 2454, 2730
BfmI	CTRYAG	6 cut(s)	438, 1122, 1194, 1939, 2016, 2704
BfuI	GTATCC	1 cut(s)	214
BglII	AGATCT	1 cut(s)	1943
BmcAI	AGTACT	1 cut(s)	1585
Bme1390I	CCNGG	2 cut(s)	1002, 1881
Bme18I	GGWCC	2 cut(s)	559, 2717
BmgT120I	GGNCC	3 cut(s)	196, 559, 2717
BmiI	GGNNCC	2 cut(s)	198, 403
BmrFI	CCNGG	2 cut(s)	1002, 1881
BmrI	ACTGGG	3 cut(s)	892, 1197, 1485
BmsI	GCATC	9 cut(s)	23, 1020, 1165, 1189, 1393, 1404, 2002, 2482, 2666
BmuI	ACTGGG	3 cut(s)	892, 1197, 1485
BpiI	GAAGAC	2 cut(s)	459, 1338
BpmI	CTGGAG	3 cut(s)	537, 1269, 2213
Bpu10I	CCTNAGC	3 cut(s)	445, 2597, 2602
Bpu14I	TTCGAA	2 cut(s)	22, 990
BpuEI	CTTGAG	4 cut(s)	161, 1310, 1452, 2386
Bsa29I	ATCGAT	3 cut(s)	572, 2388, 2544
BsaAI	YACGTR	1 cut(s)	605
BsaJI	CCNNGG	5 cut(s)	372, 1001, 1015, 1380, 1954
BsaXI	ACNNNNNCTCC	2 cut(s)	219, 249
Bsc4I	CCNNNNNNNGG	7 cut(s)	302, 393, 1007, 1155, 1156, 1386, 1414
Bse118I	RCCGGY	1 cut(s)	281
Bse1I	ACTGG	9 cut(s)	365, 486, 689, 805, 887, 1192, 1252, 1480, 1611
Bse3DI	GCAATG	2 cut(s)	2392, 2437
BseBI	CCWGG	2 cut(s)	1002, 1881
BseCI	ATCGAT	3 cut(s)	572, 2388, 2544
BseDI	CCNNGG	5 cut(s)	372, 1001, 1015, 1380, 1954
BseLI	CCNNNNNNNGG	7 cut(s)	302, 393, 1007, 1155, 1156, 1386, 1414
BseMI	GCAATG	2 cut(s)	2392, 2437
BseMII	CTCAG	6 cut(s)	20, 215, 507, 1847, 2063, 2611
BseNI	ACTGG	9 cut(s)	365, 486, 689, 805, 887, 1192, 1252, 1480, 1611
BseRI	GAGGAG	4 cut(s)	503, 2141, 2483, 2520
BseSI	GKGCMC	4 cut(s)	159, 673, 1314, 2267
BseYI	CCCAGC	1 cut(s)	1154
BsgI	GTGCAG	2 cut(s)	688, 2573
BshFI	GGCC	5 cut(s)	197, 281, 1418, 1858, 2645
BshNI	GGYRCC	1 cut(s)	401
BshVI	ATCGAT	3 cut(s)	572, 2388, 2544
BsiHKAI	GWGCWC	3 cut(s)	673, 1314, 2267
BsiSI	CCGG	1 cut(s)	282
BslFI	GGGAC	2 cut(s)	1672, 2566
BslI	CCNNNNNNNGG	7 cut(s)	302, 393, 1007, 1155, 1156, 1386, 1414
BsmAI	GTCTC	1 cut(s)	1821
BsmFI	GGGAC	2 cut(s)	1672, 2566
BsmI	GAATGC	2 cut(s)	1856, 2705
BsnI	GGCC	5 cut(s)	197, 281, 1418, 1858, 2645
Bsp119I	TTCGAA	2 cut(s)	22, 990
Bsp1286I	GDGCHC	4 cut(s)	159, 673, 1314, 2267
Bsp1407I	TGTACA	1 cut(s)	1729
Bsp19I	CCATGG	3 cut(s)	1015, 1380, 1954
BspACI	CCGC	4 cut(s)	218, 557, 926, 1263
BspANI	GGCC	5 cut(s)	197, 281, 1418, 1858, 2645
BspCNI	CTCAG	6 cut(s)	21, 214, 508, 1846, 2062, 2610
BspDI	ATCGAT	3 cut(s)	572, 2388, 2544
BspHI	TCATGA	1 cut(s)	2185
BspLI	GGNNCC	2 cut(s)	198, 403
BspMAI	CTGCAG	2 cut(s)	1198, 1943
BspPI	GGATC	2 cut(s)	1111, 2068
BspQI	GCTCTTC	1 cut(s)	1534
BspT104I	TTCGAA	2 cut(s)	22, 990
BspT107I	GGYRCC	1 cut(s)	401
BsrDI	GCAATG	2 cut(s)	2392, 2437
BsrFI	RCCGGY	1 cut(s)	281
BsrGI	TGTACA	1 cut(s)	1729
BsrI	ACTGG	9 cut(s)	365, 486, 689, 805, 887, 1192, 1252, 1480, 1611
BssAI	RCCGGY	1 cut(s)	281
BssECI	CCNNGG	5 cut(s)	372, 1001, 1015, 1380, 1954
BssT1I	CCWWGG	4 cut(s)	372, 1015, 1380, 1954
Bst2UI	CCWGG	2 cut(s)	1002, 1881
Bst6I	CTCTTC	2 cut(s)	125, 1534
BstAPI	GCANNNNNTGC	1 cut(s)	1646
BstAUI	TGTACA	1 cut(s)	1729
BstBAI	YACGTR	1 cut(s)	605
BstBI	TTCGAA	2 cut(s)	22, 990
BstDEI	CTNAG	8 cut(s)	29, 201, 445, 516, 1833, 2049, 2597, 2602
BstDSI	CCRYGG	3 cut(s)	1015, 1380, 1954
BstENI	CCTNNNNNAGG	1 cut(s)	1005
BstMAI	GTCTC	1 cut(s)	1821
BstNI	CCWGG	2 cut(s)	1002, 1881
BstNSI	RCATGY	3 cut(s)	1665, 1690, 1730
BstSCI	CCNGG	2 cut(s)	1000, 1879
BstSFI	CTRYAG	6 cut(s)	438, 1122, 1194, 1939, 2016, 2704
BstSLI	GKGCMC	4 cut(s)	159, 673, 1314, 2267
BstV2I	GAAGAC	2 cut(s)	459, 1338
BstX2I	RGATCY	2 cut(s)	1103, 1943
BstXI	CCANNNNNNTGG	2 cut(s)	1632, 1931
BstYI	RGATCY	2 cut(s)	1103, 1943
Bsu15I	ATCGAT	3 cut(s)	572, 2388, 2544
BsuI	GTATCC	1 cut(s)	214
BsuRI	GGCC	5 cut(s)	197, 281, 1418, 1858, 2645
BsuTUI	ATCGAT	3 cut(s)	572, 2388, 2544
BtgI	CCRYGG	3 cut(s)	1015, 1380, 1954
BtgZI	GCGATG	1 cut(s)	112
BtsI	GCAGTG	3 cut(s)	69, 177, 216
BtsIMutI	CAGTG	7 cut(s)	69, 177, 216, 387, 1166, 1473, 1604
CaiI	CAGNNNCTG	1 cut(s)	1202
CciI	TCATGA	1 cut(s)	2185
Cfr10I	RCCGGY	1 cut(s)	281
Cfr13I	GGNCC	3 cut(s)	196, 559, 2717
ClaI	ATCGAT	3 cut(s)	572, 2388, 2544
CseI	GACGC	2 cut(s)	1062, 2568
Csp6I	GTAC	5 cut(s)	72, 804, 1129, 1584, 1730
CviQI	GTAC	5 cut(s)	72, 804, 1129, 1584, 1730
DdeI	CTNAG	8 cut(s)	29, 201, 445, 516, 1833, 2049, 2597, 2602
DraI	TTTAAA	1 cut(s)	1360
EaeI	YGGCCR	1 cut(s)	1416
Eam1104I	CTCTTC	2 cut(s)	125, 1534
EarI	CTCTTC	2 cut(s)	125, 1534
Eco130I	CCWWGG	4 cut(s)	372, 1015, 1380, 1954
Eco147I	AGGCCT	1 cut(s)	1858
Eco47I	GGWCC	2 cut(s)	559, 2717
Eco57I	CTGAAG	4 cut(s)	471, 1235, 1350, 2105
EcoNI	CCTNNNNNAGG	1 cut(s)	1005
EcoRII	CCWGG	2 cut(s)	1000, 1879
EcoT14I	CCWWGG	4 cut(s)	372, 1015, 1380, 1954
ErhI	CCWWGG	4 cut(s)	372, 1015, 1380, 1954
FalI	AAGNNNNNCTT	6 cut(s)	1048, 1080, 1813, 1845, 2078, 2110
FaqI	GGGAC	2 cut(s)	1672, 2566
FauNDI	CATATG	1 cut(s)	2535
FbaI	TGATCA	2 cut(s)	738, 1927
FspBI	CTAG	6 cut(s)	563, 909, 1860, 2076, 2454, 2730
GsaI	CCCAGC	1 cut(s)	1158
GsuI	CTGGAG	3 cut(s)	537, 1269, 2213
HaeIII	GGCC	5 cut(s)	197, 281, 1418, 1858, 2645
HapII	CCGG	1 cut(s)	282
HgaI	GACGC	2 cut(s)	1062, 2568
HindIII	AAGCTT	2 cut(s)	2092, 2436
HpaII	CCGG	1 cut(s)	282
HphI	GGTGA	7 cut(s)	115, 296, 338, 761, 830, 841, 2517
Hpy166II	GTNNAC	7 cut(s)	671, 1142, 1312, 2030, 2265, 2633, 2711
Hpy188III	TCNNGA	9 cut(s)	95, 1301, 1328, 1438, 1469, 1507, 2186, 2192, 2513
Hpy8I	GTNNAC	7 cut(s)	671, 1142, 1312, 2030, 2265, 2633, 2711
HpyAV	CCTTC	8 cut(s)	271, 898, 1001, 1094, 1361, 1513, 2080, 2689
HpyCH4IV	ACGT	1 cut(s)	604
HpyF3I	CTNAG	8 cut(s)	29, 201, 445, 516, 1833, 2049, 2597, 2602
HpySE526I	ACGT	1 cut(s)	604
Ksp22I	TGATCA	2 cut(s)	738, 1927
LguI	GCTCTTC	1 cut(s)	1534
LmnI	GCTCC	3 cut(s)	618, 1210, 2470
LweI	GCATC	9 cut(s)	23, 1020, 1165, 1189, 1393, 1404, 2002, 2482, 2666
MaeI	CTAG	6 cut(s)	563, 909, 1860, 2076, 2454, 2730
MaeII	ACGT	1 cut(s)	604
MaeIII	GTNAC	9 cut(s)	367, 694, 749, 851, 1901, 2196, 2411, 2561, 2749
MboII	GAAGA	9 cut(s)	112, 464, 957, 1228, 1316, 1343, 1551, 2037, 2264
MfeI	CAATTG	4 cut(s)	75, 957, 2104, 2754
MflI	RGATCY	2 cut(s)	1103, 1943
MhlI	GDGCHC	4 cut(s)	159, 673, 1314, 2267
MlsI	TGGCCA	1 cut(s)	1418
MluNI	TGGCCA	1 cut(s)	1418
MlyI	GAGTC	5 cut(s)	152, 365, 377, 2204, 2317
MmeI	TCCRAC	2 cut(s)	1115, 2634
Mox20I	TGGCCA	1 cut(s)	1418
MroXI	GAANNNNTTC	5 cut(s)	291, 996, 1086, 1323, 1781
MscI	TGGCCA	1 cut(s)	1418
MseI	TTAA	7 cut(s)	252, 257, 1230, 1350, 1359, 1490, 2205
MslI	CAYNNNNRTG	9 cut(s)	50, 1379, 1490, 1713, 1737, 1929, 1953, 2214, 2289
Msp20I	TGGCCA	1 cut(s)	1418
MspA1I	CMGCKG	4 cut(s)	557, 596, 926, 1424
MspI	CCGG	1 cut(s)	282
MspR9I	CCNGG	2 cut(s)	1002, 1881
MunI	CAATTG	4 cut(s)	75, 957, 2104, 2754
Mva1269I	GAATGC	2 cut(s)	1856, 2705
MvaI	CCWGG	2 cut(s)	1002, 1881
NcoI	CCATGG	3 cut(s)	1015, 1380, 1954
NdeI	CATATG	1 cut(s)	2535
NlaIV	GGNNCC	2 cut(s)	198, 403
NmuCI	GTSAC	6 cut(s)	694, 749, 851, 1901, 2196, 2411
NspI	RCATGY	3 cut(s)	1665, 1690, 1730
NspV	TTCGAA	2 cut(s)	22, 990
PaeI	GCATGC	1 cut(s)	1690
PagI	TCATGA	1 cut(s)	2185
PceI	AGGCCT	1 cut(s)	1858
PciI	ACATGT	1 cut(s)	1726
PciSI	GCTCTTC	1 cut(s)	1534
PctI	GAATGC	2 cut(s)	1856, 2705
PdmI	GAANNNNTTC	5 cut(s)	291, 996, 1086, 1323, 1781
PfeI	GAWTC	7 cut(s)	522, 763, 1844, 2131, 2316, 2573, 2726
PflMI	CCANNNNNTGG	1 cut(s)	393
PleI	GAGTC	5 cut(s)	151, 364, 377, 2203, 2316
PpsI	GAGTC	5 cut(s)	151, 364, 377, 2203, 2316
Ppu21I	YACGTR	1 cut(s)	605
PscI	ACATGT	1 cut(s)	1726
PshBI	ATTAAT	1 cut(s)	2205
Psp6I	CCWGG	2 cut(s)	1000, 1879
PspFI	CCCAGC	1 cut(s)	1154
PspGI	CCWGG	2 cut(s)	1000, 1879
PspN4I	GGNNCC	2 cut(s)	198, 403
PspPI	GGNCC	3 cut(s)	196, 559, 2717
PstI	CTGCAG	2 cut(s)	1198, 1943
PstNI	CAGNNNCTG	1 cut(s)	1202
PsuI	RGATCY	2 cut(s)	1103, 1943
PvuII	CAGCTG	2 cut(s)	596, 1424
RsaI	GTAC	5 cut(s)	73, 805, 1130, 1585, 1731
RsaNI	GTAC	5 cut(s)	72, 804, 1129, 1584, 1730
RseI	CAYNNNNRTG	9 cut(s)	50, 1379, 1490, 1713, 1737, 1929, 1953, 2214, 2289
SapI	GCTCTTC	1 cut(s)	1534
SaqAI	TTAA	7 cut(s)	252, 257, 1230, 1350, 1359, 1490, 2205
Sau96I	GGNCC	3 cut(s)	196, 559, 2717
ScaI	AGTACT	1 cut(s)	1585
SchI	GAGTC	5 cut(s)	152, 365, 377, 2204, 2317
ScrFI	CCNGG	2 cut(s)	1002, 1881
SduI	GDGCHC	4 cut(s)	159, 673, 1314, 2267
SfaNI	GCATC	9 cut(s)	23, 1020, 1165, 1189, 1393, 1404, 2002, 2482, 2666
SfcI	CTRYAG	6 cut(s)	438, 1122, 1194, 1939, 2016, 2704
SfuI	TTCGAA	2 cut(s)	22, 990
SinI	GGWCC	2 cut(s)	559, 2717
SmiMI	CAYNNNNRTG	9 cut(s)	50, 1379, 1490, 1713, 1737, 1929, 1953, 2214, 2289
SmlI	CTYRAG	4 cut(s)	140, 1289, 1467, 2401
SmoI	CTYRAG	4 cut(s)	140, 1289, 1467, 2401
SphI	GCATGC	1 cut(s)	1690
SseBI	AGGCCT	1 cut(s)	1858
SsiI	CCGC	4 cut(s)	218, 557, 926, 1263
SspMI	CTAG	6 cut(s)	563, 909, 1860, 2076, 2454, 2730
StuI	AGGCCT	1 cut(s)	1858
StyD4I	CCNGG	2 cut(s)	1000, 1879
StyI	CCWWGG	4 cut(s)	372, 1015, 1380, 1954
TaiI	ACGT	1 cut(s)	607
TaqI	TCGA	8 cut(s)	22, 572, 990, 1183, 1439, 1871, 2388, 2544
TatI	WGTACW	2 cut(s)	1583, 1729
TauI	GCSGC	2 cut(s)	929, 1265
TfiI	GAWTC	7 cut(s)	522, 763, 1844, 2131, 2316, 2573, 2726
Tru1I	TTAA	7 cut(s)	252, 257, 1230, 1350, 1359, 1490, 2205
Tru9I	TTAA	7 cut(s)	252, 257, 1230, 1350, 1359, 1490, 2205
TscAI	CASTG	7 cut(s)	69, 177, 216, 394, 1173, 1480, 1611
TseFI	GTSAC	6 cut(s)	694, 749, 851, 1901, 2196, 2411
Tsp45I	GTSAC	6 cut(s)	694, 749, 851, 1901, 2196, 2411
TspDTI	ATGAA	6 cut(s)	17, 514, 599, 745, 2448, 2708
TspGWI	ACGGA	3 cut(s)	654, 839, 957
TspRI	CASTG	7 cut(s)	69, 177, 216, 394, 1173, 1480, 1611
Van91I	CCANNNNNTGG	1 cut(s)	393
VneI	GTGCAC	3 cut(s)	669, 1310, 2263
VpaK11BI	GGWCC	2 cut(s)	559, 2717
VspI	ATTAAT	1 cut(s)	2205
XagI	CCTNNNNNAGG	1 cut(s)	1005
XapI	RAATTY	4 cut(s)	821, 1355, 2236, 2666
XceI	RCATGY	3 cut(s)	1665, 1690, 1730
XmnI	GAANNNNTTC	5 cut(s)	291, 996, 1086, 1323, 1781
XspI	CTAG	6 cut(s)	563, 909, 1860, 2076, 2454, 2730
ZrmI	AGTACT	1 cut(s)	1585

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.