AT4G30120

cadmium zinc-transporting ATPase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
14730215 .. 14733628
3414 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G30120.1

Sequence Viewer

Length: 1629 bp
ATGGCGGAAGGTGAAGAGTCAAAGAAGATGAATTTACAGACAAGTTACTTCGACGTCGTTGGAATCTGCTGTTCATCGGAGGTTTCTATCGTAGGTAACGTTCTCCGTCAAGTGGACGGCGTTAAAGAATTCTCAGTCATCGTTCCTTCTAGAACCGTCATCGTTGTCCACGATACTTTTTTGATTTCTCCACTTCAAATCGTCAAGGCTCTGAATCAAGCAAGACTAGAAGCAAGTGTTAGACCATACGGAGAAACAAGCTTGAAGAGTCAATGGCCAAGCCCTTTCGCAATAGTTTCTGGTGTACTGCTAGTTCTCTCCTTCTTCAAATACTTTTATAGTCCGCTTGAATGGCTCGCTATTGTTGCCGTGGTGGCTGGAGTTTTCCCCATTCTTGCTAAAGCTGTTGCTTCAGTCACAAGGTTCAGGCTTGACATCAACGCTCTCACTCTAATTGCTGTGATAGCAACGCTATGTATGCAGGATTTCACAGAAGCTGCTACAATTGTGTTTTTATTCTCAGTTGCAGATTGGCTTGAGTCTAGTGCTGCTCATAAGGCAAGCATAGTAATGTCATCACTGATGAGCTTAGCGCCACGGAAGGCAGTGATCGCGGATACTGGACTAGAAGTTGATGTTGATGAGGTTGGGATCAACACCGTTGTTTCAGTTAAAGCTGGAGAAAGTATACCGATCGATGGAGTTGTGGTGGATGGAAGCTGTGATGTGGATGAGAAAACATTGACAGGAGAATCATTCCCTGTCTCCAAACAGAGAGAGTCAACTGTTATGGCTGCAACCATAAATCTTAATGGTTATATAAAGGTGAAAACTACAGCTCTAGCCCGGGACTGCGTGGTTGCGAAAATGACTAAGCTTGTAGAAGAAGCTCAAAAAAGCCAAACCAAAACTCAAAGGTTTATAGACAAATGCTCTCGCTACTACACTCCAGCTGTTGTTGTGTCAGCAGCATGTTTTGCGGTAATCCCGGTACTGTTAAAGGTTCAAGACCTTAGCCATTGGTTTCACTTAGCACTTGTAGTGTTAGTAAGTGGTTGTCCCTGTGGTCTTATCCTATCCACACCTGTTGCTACCTTTTGTGCTCTCACTAAGGCAGCCACGTCAGGGTTTCTGATCAAAACTGGTGATTGTCTAGAGACATTAGCAAAGATCAAGATTGTTGCTTTTGACAAAACAGGAACTATTACAAAGGCTGAGTTCATGGTCTCGGATTTTAGGTCTCTTTCTCCCAGTATCAACCTGCACAAGTTGCTTTACTGGGTCTCAAGCATTGAGTGCAAGTCAAGCCATCCGATGGCAGCTGCGCTTATTGACTACGCAAGATCAGTTTCTGTTGAGCCTAAGCCTGATATAGTCGAGAACTTTCAGAACTTTCCAGGAGAAGGAGTTTATGGGAGAATAGATGGTCAAGATATCTACATTGGAAACAAAAGAATAGCACAGAGAGCTGGATGCTTAACAGATAATGTTCCGGATATTGAAGCTACTATGAAGCGAGGTAAGACCATTGGTTACATATACATGGGAGCAAAACTGACCGGAAGTTTCAACCTTTTGGATGGTTGTCGATATGGGGTTGCTCAAGCTCTTAAGGAACTCAAATCTTAG

Protein Analysis

542

Amino Acids

58.64

Weight (kDa)

7.44

Isoelectric Point (pI)

31.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
E1-E2_ATPase PF00122 206 - 295 4.5e-22 P-type ATPase actuator domain
Hydrolase PF00702 391 - 541 1.3e-07 haloacid dehalogenase-like hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 57
Acc36I ACCTGC 1 cut(s) 1269
AccB7I CCANNNNNTGG 1 cut(s) 1315
AccI GTMKAC 1 cut(s) 688
AccII CGCG 1 cut(s) 614
AccIII TCCGGA 1 cut(s) 1492
AciI CCGC 4 cut(s) 5, 344, 614, 980
AclI AACGTT 1 cut(s) 99
AclWI GGATC 1 cut(s) 659
AcoI YGGCCR 1 cut(s) 275
AcsI RAATTY 2 cut(s) 31, 128
AcuI CTGAAG 1 cut(s) 396
AcyI GRCGYC 1 cut(s) 54
AfaI GTAC 2 cut(s) 306, 993
AfiI CCNNNNNNNGG 5 cut(s) 112, 698, 1125, 1315, 1403
AflII CTTAAG 1 cut(s) 1610
AgsI TTSAA 7 cut(s) 197, 265, 328, 350, 1007, 1502, 1570
AjiI CACGTC 1 cut(s) 1122
AjnI CCWGG 1 cut(s) 1396
Alw21I GWGCWC 1 cut(s) 1105
Alw26I GTCTC 5 cut(s) 769, 1151, 1231, 1245, 1288
AlwI GGATC 1 cut(s) 659
AlwNI CAGNNNCTG 2 cut(s) 497, 1352
Ama87I CYCGRG 1 cut(s) 846
Aor13HI TCCGGA 1 cut(s) 1492
AoxI GGCC 1 cut(s) 275
ApeKI GCWGC 7 cut(s) 497, 548, 794, 968, 1115, 1319, 1322
ApoI RAATTY 2 cut(s) 31, 128
AspLEI GCGC 2 cut(s) 595, 1327
AsuC2I CCSGG 3 cut(s) 847, 848, 989
AsuHPI GGTGA 3 cut(s) 23, 838, 1157
AvaI CYCGRG 1 cut(s) 846
BalI TGGCCA 1 cut(s) 277
Bbv12I GWGCWC 1 cut(s) 1105
BbvI GCAGC 7 cut(s) 484, 535, 781, 980, 1127, 1309, 1331
BccI CCATC 6 cut(s) 692, 707, 1309, 1317, 1418, 1574
BceAI ACGGC 2 cut(s) 133, 353
BciT130I CCWGG 1 cut(s) 1398
BciVI GTATCC 1 cut(s) 610
BclI TGATCA 1 cut(s) 1134
BcnI CCSGG 3 cut(s) 847, 848, 989
BcoDI GTCTC 5 cut(s) 769, 1151, 1231, 1245, 1288
BfaI CTAG 7 cut(s) 150, 227, 311, 543, 626, 842, 1154
BfmI CTRYAG 1 cut(s) 834
BfoI RGCGCY 1 cut(s) 596
BfrI CTTAAG 1 cut(s) 1610
BfuAI ACCTGC 1 cut(s) 1269
BfuI GTATCC 1 cut(s) 610
BglI GCCNNNNNGGC 1 cut(s) 374
BisI GCNGC 7 cut(s) 498, 549, 795, 969, 1116, 1320, 1323
BlpI GCTNAGC 1 cut(s) 589
BlsI GCNGC 7 cut(s) 499, 550, 796, 970, 1117, 1321, 1324
Bme1390I CCNGG 4 cut(s) 847, 848, 989, 1398
BmeT110I CYCGRG 1 cut(s) 846
BmgBI CACGTC 1 cut(s) 1122
BmrFI CCNGG 4 cut(s) 847, 848, 989, 1398
BmrI ACTGGG 2 cut(s) 1245, 1288
BmsI GCATC 1 cut(s) 1463
BmuI ACTGGG 2 cut(s) 1245, 1288
BpmI CTGGAG 3 cut(s) 399, 699, 933
Bpu10I CCTNAGC 2 cut(s) 1013, 1362
Bpu1102I GCTNAGC 1 cut(s) 589
BpuEI CTTGAG 3 cut(s) 557, 1270, 1587
BpuMI CCSGG 3 cut(s) 847, 848, 989
Bsa29I ATCGAT 1 cut(s) 696
BsaHI GRCGYC 1 cut(s) 54
BsaI GGTCTC 3 cut(s) 1231, 1245, 1288
BsaJI CCNNGG 3 cut(s) 369, 596, 846
BsaWI WCCGGW 2 cut(s) 1492, 1559
BsaXI ACNNNNNCTCC 4 cut(s) 693, 723, 1392, 1422
Bsc4I CCNNNNNNNGG 5 cut(s) 112, 698, 1125, 1315, 1403
Bse1I ACTGG 4 cut(s) 625, 1147, 1251, 1283
BseAI TCCGGA 1 cut(s) 1492
BseBI CCWGG 1 cut(s) 1398
BseCI ATCGAT 1 cut(s) 696
BseDI CCNNGG 3 cut(s) 369, 596, 846
BseGI GGATG 5 cut(s) 718, 736, 1309, 1478, 1585
BseLI CCNNNNNNNGG 5 cut(s) 112, 698, 1125, 1315, 1403
BseMII CTCAG 3 cut(s) 147, 534, 1206
BseNI ACTGG 4 cut(s) 625, 1147, 1251, 1283
BseXI GCAGC 7 cut(s) 484, 535, 781, 980, 1127, 1309, 1331
BsgI GTGCAG 1 cut(s) 1247
Bsh1236I CGCG 1 cut(s) 614
Bsh1285I CGRYCG 1 cut(s) 696
BshFI GGCC 1 cut(s) 277
BshVI ATCGAT 1 cut(s) 696
BsiEI CGRYCG 1 cut(s) 696
BsiHKAI GWGCWC 1 cut(s) 1105
BsiHKCI CYCGRG 1 cut(s) 846
BsiSI CCGG 4 cut(s) 847, 989, 1493, 1560
BslFI GGGAC 2 cut(s) 863, 1044
BslI CCNNNNNNNGG 5 cut(s) 112, 698, 1125, 1315, 1403
BsmAI GTCTC 5 cut(s) 769, 1151, 1231, 1245, 1288
BsmFI GGGAC 2 cut(s) 863, 1044
BsnI GGCC 1 cut(s) 277
Bso31I GGTCTC 3 cut(s) 1231, 1245, 1288
BsoBI CYCGRG 1 cut(s) 846
Bsp1286I GDGCHC 1 cut(s) 1105
Bsp13I TCCGGA 1 cut(s) 1492
Bsp143I GATC 6 cut(s) 609, 651, 693, 1134, 1170, 1343
Bsp1720I GCTNAGC 1 cut(s) 589
BspACI CCGC 4 cut(s) 5, 344, 614, 980
BspANI GGCC 1 cut(s) 277
BspCNI CTCAG 3 cut(s) 146, 533, 1207
BspDI ATCGAT 1 cut(s) 696
BspEI TCCGGA 1 cut(s) 1492
BspFNI CGCG 1 cut(s) 614
BspMI ACCTGC 1 cut(s) 1269
BspPI GGATC 1 cut(s) 659
BspTI CTTAAG 1 cut(s) 1610
BspTNI GGTCTC 3 cut(s) 1231, 1245, 1288
BsrI ACTGG 4 cut(s) 625, 1147, 1251, 1283
BssECI CCNNGG 3 cut(s) 369, 596, 846
BssMI GATC 6 cut(s) 609, 651, 693, 1134, 1170, 1343
BssNAI GTATAC 1 cut(s) 689
BssNI GRCGYC 1 cut(s) 54
Bst1107I GTATAC 1 cut(s) 689
Bst2UI CCWGG 1 cut(s) 1398
Bst4CI ACNGT 4 cut(s) 157, 661, 787, 996
Bst6I CTCTTC 2 cut(s) 9, 260
BstACI GRCGYC 1 cut(s) 54
BstAFI CTTAAG 1 cut(s) 1610
BstAPI GCANNNNNTGC 3 cut(s) 977, 1270, 1296
BstC8I GCNNGC 2 cut(s) 357, 562
BstDSI CCRYGG 2 cut(s) 369, 596
BstF5I GGATG 5 cut(s) 718, 736, 1309, 1478, 1585
BstFNI CGCG 1 cut(s) 614
BstH2I RGCGCY 1 cut(s) 596
BstHHI GCGC 2 cut(s) 595, 1327
BstKTI GATC 6 cut(s) 612, 654, 696, 1137, 1173, 1346
BstMAI GTCTC 5 cut(s) 769, 1151, 1231, 1245, 1288
BstMBI GATC 6 cut(s) 609, 651, 693, 1134, 1170, 1343
BstMCI CGRYCG 1 cut(s) 696
BstNI CCWGG 1 cut(s) 1398
BstNSI RCATGY 1 cut(s) 975
BstSCI CCNGG 4 cut(s) 845, 846, 987, 1396
BstSFI CTRYAG 1 cut(s) 834
BstUI CGCG 1 cut(s) 614
BstV1I GCAGC 7 cut(s) 484, 535, 781, 980, 1127, 1309, 1331
BstZ17I GTATAC 1 cut(s) 689
Bsu15I ATCGAT 1 cut(s) 696
BsuI GTATCC 1 cut(s) 610
BsuRI GGCC 1 cut(s) 277
BsuTUI ATCGAT 1 cut(s) 696
BtgI CCRYGG 2 cut(s) 369, 596
BtrI CACGTC 1 cut(s) 1122
BtsCI GGATG 5 cut(s) 718, 736, 1309, 1478, 1585
BtsI GCAGTG 1 cut(s) 612
BtsIMutI CAGTG 2 cut(s) 578, 612
BveI ACCTGC 1 cut(s) 1269
Cac8I GCNNGC 2 cut(s) 357, 562
CaiI CAGNNNCTG 2 cut(s) 497, 1352
CfoI GCGC 2 cut(s) 595, 1327
Cfr9I CCCGGG 1 cut(s) 846
ClaI ATCGAT 1 cut(s) 696
Csp6I GTAC 2 cut(s) 305, 992
CspCI CAANNNNNGTGG 2 cut(s) 1069, 1104
CviAII CATG 3 cut(s) 972, 1222, 1543
CviQI GTAC 2 cut(s) 305, 992
DpnI GATC 6 cut(s) 611, 653, 695, 1136, 1172, 1345
DpnII GATC 6 cut(s) 609, 651, 693, 1134, 1170, 1343
EaeI YGGCCR 1 cut(s) 275
Eam1104I CTCTTC 2 cut(s) 9, 260
EarI CTCTTC 2 cut(s) 9, 260
EciI GGCGGA 1 cut(s) 20
Eco31I GGTCTC 3 cut(s) 1231, 1245, 1288
Eco32I GATATC 1 cut(s) 1435
Eco57I CTGAAG 1 cut(s) 396
Eco88I CYCGRG 1 cut(s) 846
EcoRI GAATTC 1 cut(s) 128
EcoRII CCWGG 1 cut(s) 1396
EcoRV GATATC 1 cut(s) 1435
FaeI CATG 3 cut(s) 975, 1225, 1546
FaqI GGGAC 2 cut(s) 863, 1044
FatI CATG 3 cut(s) 971, 1221, 1542
FbaI TGATCA 1 cut(s) 1134
FblI GTMKAC 1 cut(s) 688
Fnu4HI GCNGC 7 cut(s) 498, 549, 795, 969, 1116, 1320, 1323
FokI GGATG 5 cut(s) 725, 743, 1296, 1485, 1592
Fsp4HI GCNGC 7 cut(s) 498, 549, 795, 969, 1116, 1320, 1323
FspBI CTAG 7 cut(s) 150, 227, 311, 543, 626, 842, 1154
GlaI GCGC 2 cut(s) 594, 1326
GluI GCNGC 7 cut(s) 498, 549, 795, 969, 1116, 1320, 1323
GsuI CTGGAG 3 cut(s) 399, 699, 933
HaeII RGCGCY 1 cut(s) 596
HaeIII GGCC 1 cut(s) 277
HapII CCGG 4 cut(s) 847, 989, 1493, 1560
HhaI GCGC 2 cut(s) 595, 1327
Hin1I GRCGYC 1 cut(s) 54
Hin1II CATG 3 cut(s) 975, 1225, 1546
Hin6I GCGC 2 cut(s) 593, 1325
HinP1I GCGC 2 cut(s) 593, 1325
HincII GTYRAC 1 cut(s) 783
HindII GTYRAC 1 cut(s) 783
HindIII AAGCTT 2 cut(s) 259, 875
HinfI GANTC 7 cut(s) 17, 63, 214, 268, 539, 752, 779
HpaII CCGG 4 cut(s) 847, 989, 1493, 1560
HphI GGTGA 3 cut(s) 23, 838, 1157
Hpy166II GTNNAC 5 cut(s) 115, 169, 305, 689, 783
Hpy188I TCNGA 6 cut(s) 79, 213, 1134, 1231, 1314, 1389
Hpy188III TCNNGA 7 cut(s) 150, 1007, 1154, 1174, 1378, 1430, 1493
Hpy8I GTNNAC 5 cut(s) 115, 169, 305, 689, 783
Hpy99I CGWCG 2 cut(s) 56, 59
HpyAV CCTTC 4 cut(s) 156, 331, 595, 1397
HpyCH4III ACNGT 4 cut(s) 157, 661, 787, 996
HpyCH4IV ACGT 3 cut(s) 54, 99, 1121
HpyCH4V TGCA 5 cut(s) 481, 527, 797, 1264, 1299
HpySE526I ACGT 3 cut(s) 54, 99, 1121
Hsp92I GRCGYC 1 cut(s) 54
Hsp92II CATG 3 cut(s) 975, 1225, 1546
HspAI GCGC 2 cut(s) 593, 1325
Kpn2I TCCGGA 1 cut(s) 1492
Ksp22I TGATCA 1 cut(s) 1134
Kzo9I GATC 6 cut(s) 609, 651, 693, 1134, 1170, 1343
LmnI GCTCC 1 cut(s) 1547
Lsp1109I GCAGC 7 cut(s) 484, 535, 781, 980, 1127, 1309, 1331
LweI GCATC 1 cut(s) 1463
MaeI CTAG 7 cut(s) 150, 227, 311, 543, 626, 842, 1154
MaeII ACGT 3 cut(s) 54, 99, 1121
MaeIII GTNAC 4 cut(s) 44, 95, 415, 1532
MalI GATC 6 cut(s) 611, 653, 695, 1136, 1172, 1345
MboI GATC 6 cut(s) 609, 651, 693, 1134, 1170, 1343
MboII GAAGA 5 cut(s) 26, 37, 277, 316, 896
MfeI CAATTG 1 cut(s) 504
MhlI GDGCHC 1 cut(s) 1105
MlsI TGGCCA 1 cut(s) 277
MluCI AATT 4 cut(s) 31, 128, 453, 504
MluNI TGGCCA 1 cut(s) 277
MlyI GAGTC 4 cut(s) 26, 277, 548, 788
MmeI TCCRAC 1 cut(s) 40
MnlI CCTC 3 cut(s) 73, 637, 1511
Mox20I TGGCCA 1 cut(s) 277
MroI TCCGGA 1 cut(s) 1492
MscI TGGCCA 1 cut(s) 277
MseI TTAA 6 cut(s) 123, 672, 810, 998, 1478, 1611
MslI CAYNNNNRTG 2 cut(s) 569, 1541
Msp20I TGGCCA 1 cut(s) 277
MspA1I CMGCKG 2 cut(s) 953, 1322
MspCI CTTAAG 1 cut(s) 1610
MspI CCGG 4 cut(s) 847, 989, 1493, 1560
MspR9I CCNGG 4 cut(s) 847, 848, 989, 1398
MunI CAATTG 1 cut(s) 504
MvaI CCWGG 1 cut(s) 1398
MvnI CGCG 1 cut(s) 614
NciI CCSGG 3 cut(s) 847, 848, 989
NdeII GATC 6 cut(s) 609, 651, 693, 1134, 1170, 1343
NlaIII CATG 3 cut(s) 975, 1225, 1546
NmuCI GTSAC 1 cut(s) 415
NspI RCATGY 1 cut(s) 975
PcsI WCGNNNNNNNCGW 2 cut(s) 96, 168
PfeI GAWTC 3 cut(s) 63, 214, 752
PflMI CCANNNNNTGG 1 cut(s) 1315
PfoI TCCNGGA 1 cut(s) 1396
PkrI GCNGC 7 cut(s) 499, 550, 796, 970, 1117, 1321, 1324
Ple19I CGATCG 1 cut(s) 696
PleI GAGTC 4 cut(s) 25, 276, 547, 787
PpsI GAGTC 4 cut(s) 25, 276, 547, 787
Psp1406I AACGTT 1 cut(s) 99
Psp6I CCWGG 1 cut(s) 1396
PspGI CCWGG 1 cut(s) 1396
PsrI GAACNNNNNNTAC 4 cut(s) 84, 116, 297, 329
PstNI CAGNNNCTG 2 cut(s) 497, 1352
PvuI CGATCG 1 cut(s) 696
PvuII CAGCTG 2 cut(s) 953, 1322
RsaI GTAC 2 cut(s) 306, 993
RsaNI GTAC 2 cut(s) 305, 992
RseI CAYNNNNRTG 2 cut(s) 569, 1541
SaqAI TTAA 6 cut(s) 123, 672, 810, 998, 1478, 1611
SatI GCNGC 7 cut(s) 498, 549, 795, 969, 1116, 1320, 1323
Sau3AI GATC 6 cut(s) 609, 651, 693, 1134, 1170, 1343
SchI GAGTC 4 cut(s) 26, 277, 548, 788
ScrFI CCNGG 4 cut(s) 847, 848, 989, 1398
SduI GDGCHC 1 cut(s) 1105
SfaNI GCATC 1 cut(s) 1463
SfcI CTRYAG 1 cut(s) 834
SmaI CCCGGG 1 cut(s) 848
SmiMI CAYNNNNRTG 2 cut(s) 569, 1541
SmlI CTYRAG 4 cut(s) 536, 1285, 1602, 1610
SmoI CTYRAG 4 cut(s) 536, 1285, 1602, 1610
Sse9I AATT 4 cut(s) 31, 128, 453, 504
SsiI CCGC 4 cut(s) 5, 344, 614, 980
SspMI CTAG 7 cut(s) 150, 227, 311, 543, 626, 842, 1154
StyD4I CCNGG 4 cut(s) 845, 846, 987, 1396
TaaI ACNGT 4 cut(s) 157, 661, 787, 996
TaiI ACGT 3 cut(s) 57, 102, 1124
TaqI TCGA 4 cut(s) 51, 696, 1377, 1588
TasI AATT 4 cut(s) 31, 128, 453, 504
TatI WGTACW 1 cut(s) 304
TfiI GAWTC 3 cut(s) 63, 214, 752
Tru1I TTAA 6 cut(s) 123, 672, 810, 998, 1478, 1611
Tru9I TTAA 6 cut(s) 123, 672, 810, 998, 1478, 1611
TscAI CASTG 2 cut(s) 585, 612
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 7 cut(s) 497, 548, 794, 968, 1115, 1319, 1322
Tsp45I GTSAC 1 cut(s) 415
TspDTI ATGAA 4 cut(s) 44, 63, 1210, 1526
TspGWI ACGGA 3 cut(s) 95, 264, 613
TspMI CCCGGG 1 cut(s) 846
TspRI CASTG 2 cut(s) 585, 612
Van91I CCANNNNNTGG 1 cut(s) 1315
Vha464I CTTAAG 1 cut(s) 1610
XapI RAATTY 2 cut(s) 31, 128
XbaI TCTAGA 2 cut(s) 149, 1153
XceI RCATGY 1 cut(s) 975
XmaI CCCGGG 1 cut(s) 846
XmiI GTMKAC 1 cut(s) 688
XspI CTAG 7 cut(s) 150, 227, 311, 543, 626, 842, 1154
ZraI GACGTC 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.