Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001793

Physical Location & Seq

Genomic Coordinates Forward (+)

60344632 .. 60349041

Gene Structure 4410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020035

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGTTTAGCGTTCAGGTATTTGGTGATGAGCAGGATCAGGTGGAGGGAGAAAACAAGTCCGCCATGAAGTTGCAGAAAAGCTACTTCGACGTGTTGGGCCTTTGCTGCTCATCCGAAGTTGCTCTGGTGGAGAATATCTTGAAGCCTCTTAATGGTGTTAAAGAGGTCTCAGTCATTCTCCCTTCTAAAACTGTCATTGTCGTCCATGATAGTCACCTCATTTCCCAGATTCAGATTGATGAGGCTATGAATGAAGCAAGGCTAGAATCAAGTGTCAAGGTGCACGTGGAGAATTACAAGAAAAAATGGCCCAGTCCATATGCGATTGCTAGTGGTGTATTGCTGCTATTGTCATTGTTAAAGTATGTATACAGCCCATTACAGTGGTTGGCCCTAGGAGCAGTAGCAGCTGGTATTTTTCCGATTTTAATGAAATGTGTAGCTTCGATTCGAAATCTTAAGATTGACATCAACATTCTCGTCATTGTTGCAGTGATTGGAACAATTGCTATGAGTGATTATGTGGAAGCTGGTACTATAGTCTTCCTGTTCACCATTGCAGAGTGGCTTGAATCCAGGTCACGTCATAAGGCAAATGCAGTGATGTCATCTTTGATGAGCATGGCCCCCCAAAAAGCTGTCCTAGCATCAACAGGAGATATTGTGGATGTTGATATGGTTGAGTTGAATACAATTCTTGCTGTTAAGGCTGGTGAAGTTATACCAATTGATGGAATTGTTGTGGAAGGCGAAGCTGAAGTGGATGAGAAGACGCTAACTGGAGAGTCATATCCAGTTGCTAAACTAAAGGACTCCACTGTCTGGGCTGGCACTGTCAATCTCAATGGTTACATTAGTGTCAAAACTACAGCCTTAGCTGGAGATTGTGTGGTTGCTGAAATGGCTAAACTTGTGGAAGAGGCCCAGAACAGAAAATCCAAAACTCAAAGATTTGTTGATAAGTTTGCAAAGTTCTACACTCCAGCGGTCCTATTCGTATCTGTTTCTGTTGCGGTGATTCCAGCTGCTTTACATGTTCCTAATTGGAGCAAATGGTTTCACTTAGCTTTGGTAGTTTTAGTGAGTGCTTGTCCATGTGCTCTCATCCTCTCTACACCTGTTGTAACTTTCTGCACACTTACGAATGCTGCAACGTCTGGCCTTCTAATCAAAGGGGGTGACTACCTCGAAATTCTTGGCAAAATCAAGACTATGTGTTTTGACAAAACTGGTACAATAACAAGTGGGGAGTTTTTCGTGATGGATTTTCAATCTCTTCGCGAGGACATCAGCTTGAACACATTGCTTTACTGGGTTGCAAGCATTGAGAGAAAGTCGAGTCATCCAATGGCAGCTGCACTGGTTGACTATGGAAGATTGCATTCAATTGAGCCAAAGCCTGAAAACGTGGAGGAATTTCAAAATTTTCCAGGCCAAGGCATTCATGGAAGAATTGATGGACAAGATATCTACATTGGAAACAGAAAAATTGCTTTGAGAACTACTTCTGGAACAGTTCCAACCATGGAAGACTATGGAAATGCTGGGAAGACGATTGGATACATATACTGTGGAGGAACCCCTGCAGGAATCTTTACACTATCTGATACTTGTCGATCTGGGGCTGCAGAGGCTGTTCGGGAGCTGAAGGAAATAGGCATTAAAACAGCTCTTCTCACAGGAGATAGTCATACTGCAGCTATACATACAAATGAGCAGCTTGAGCGAGCTTTTGAAGTGGTCCATGCAGAACTTCTACCTGAAGAGAAGGCGATAATTGTTAATGAATTTAAGATGGAAGGATATACAGCTATGGTAGGAGATGGTATCAATGATGCCCCTGCTTTAGCCACAGCCGATATTGGTATCTCAATGGGAATTTCAGGGTCGGCCCTTGCTCAAGAAACTGGGAATGTAATTTTAATGTCAAATGACATTAGAAACCTACCAAAAGCGATCCAGCTTGCAAAAAGAGCCAACAGGAAAGTGATTGAGAATGTCACTTTGTCAATGACTCCTAAGCTAGCTGTCCTTGCACTAGCCTTTGCTGGTTATCCACTTGTTTGGGCTGCAGTTCTCGCTGATGCGGGGACATGCGTACTTGTAATTCTCAACAGCATGCTACTTCTGCAAGGAAGTTACAAGAATGGAGACAACTCTGAACAACCTGATGTCCTTCATCCTGTAAGCAACAAGCATAGCCTATTGCCTCTTATAAACCAGCAGTGTTGTTCGGACAGTACTCAGAGTAGCACTACACAAGTGTGCAAACCACAGAAGTGTTGTTCCAACAGTAACGCTGCAGAAGTATGCAAACCACAAAAGTGTTGTTCTCAGAGGTCTGGAACAGAGTGCCTGCCTAGTCCTTCCAATTCAGGTATGGCTAGGAATGATGAGTGCATGAACTCGATTGAAAGTAATTGTTGCCTTACCAGTGATGTCTGTGACTCCGCCAGCTGCAAAAATAATGGTTCCAGAGTGTCATCTCTTACTGTGCCATTATTGCATGATTGCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006950 GO:0008150 GO:0009506 GO:0009636 GO:0010035 GO:0010038 GO:0010043 GO:0015691 GO:0016020 GO:0030001 GO:0030054 GO:0031090 GO:0032025 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0061687 GO:0065007 GO:0065008 GO:0070838 GO:0071585 GO:0071944 GO:0072507 GO:0072511 GO:0097501 GO:0098588 GO:0098754 GO:0098771 GO:0098805 GO:1990170

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

840

Amino Acids

90.29

Weight (kDa)

5.48

Isoelectric Point (pI)

34.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	220 - 306	3e-20	P-type ATPase actuator domain
Hydrolase	PF00702	402 - 620	2.4e-26	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19110 AT2G19110 AT2G19110 AT4G30110 AT4G30110 AT4G30120 AT4G30120
fragaria_vesca	FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520
malus_domestica	MD00G1104400.v1.1 MD01G1183400.v1.1 MD01G1183700.v1.1 MD01G1184000.v1.1 MD01G1184300.v1.1 MD13G1244500.v1.1 MD16G1252700.v1.1
prunus_persica	Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1
pyrus_communis	pycom13g21550 pycom16g21330
rosa_chinensis	RchiOBHm_Chr2g0143431 RchiOBHm_Chr4g0400101
rosa_laevigata	RLG00000009214 RLG00000020035
rosa_multiflora	Rmu_sc0000037.1_g000006
rosa_roxburghii	Rroxscaffold_2G00101850 Rroxscaffold_5G00345040 Rroxscaffold_5G00345070
rosa_rugosa	Rorug02G0381400 Rorug04G0022600 Rorug04G0022600
rosa_samantha	Rh2AG434400 Rh2BG442200 Rh2CG420300 Rh2DG452400 Rh4BG096400 Rh4CG107500 Rh4DG093000
rosa_wichuraiana	Rw2G035400 Rw4G008180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2216
AasI	GACNNNNNNGTC	1 cut(s)	818
AccB7I	CCANNNNNTGG	2 cut(s)	731, 822
AccI	GTMKAC	1 cut(s)	369
AccII	CGCG	1 cut(s)	1281
AciI	CCGC	5 cut(s)	60, 986, 1013, 2087, 2451
AclWI	GGATC	2 cut(s)	42, 1951
AcsI	RAATTY	5 cut(s)	1191, 1415, 1423, 1787, 1878
AcuI	CTGAAG	3 cut(s)	777, 1667, 1782
AcvI	CACGTG	1 cut(s)	286
AfaI	GTAC	4 cut(s)	535, 1234, 2100, 2242
AfiI	CCNNNNNNNGG	4 cut(s)	152, 731, 822, 1436
AflII	CTTAAG	1 cut(s)	458
AflIII	ACRYGT	2 cut(s)	90, 1033
AgsI	TTSAA	9 cut(s)	142, 572, 688, 1271, 1297, 1386, 1421, 1736, 2414
AjiI	CACGTC	2 cut(s)	91, 584
AjnI	CCWGG	2 cut(s)	575, 1429
AleI	CACNNNNGTG	3 cut(s)	2263, 2278, 2323
AloI	GAACNNNNNNTCC	2 cut(s)	920, 952
Alw21I	GWGCWC	2 cut(s)	285, 1102
Alw26I	GTCTC	2 cut(s)	172, 2145
Alw44I	GTGCAC	1 cut(s)	281
AlwI	GGATC	2 cut(s)	42, 1951
AlwNI	CAGNNNCTG	1 cut(s)	1634
AoxI	GGCC	8 cut(s)	97, 308, 390, 624, 921, 1159, 1432, 1890
ApaLI	GTGCAC	1 cut(s)	281
ApoI	RAATTY	5 cut(s)	1191, 1415, 1423, 1787, 1878
Asp700I	GAANNNNTTC	1 cut(s)	1504
AspA2I	CCTAGG	1 cut(s)	394
AspS9I	GGNCC	8 cut(s)	97, 309, 391, 625, 922, 988, 1741, 1891
AsuHPI	GGTGA	6 cut(s)	35, 206, 544, 725, 1027, 1190
AsuII	TTCGAA	1 cut(s)	451
AsuNHI	GCTAGC	1 cut(s)	2023
AvaII	GGWCC	2 cut(s)	988, 1741
AvrII	CCTAGG	1 cut(s)	394
BaeGI	GKGCMC	1 cut(s)	285
BaeI	ACNNNNGTAYC	2 cut(s)	525, 558
BbrPI	CACGTG	1 cut(s)	286
BbsI	GAAGAC	4 cut(s)	535, 776, 1536, 1556
Bbv12I	GWGCWC	2 cut(s)	285, 1102
BccI	CCATC	5 cut(s)	725, 1255, 1451, 1789, 1817
BciT130I	CCWGG	2 cut(s)	577, 1431
BciVI	GTATCC	1 cut(s)	1553
BcoDI	GTCTC	2 cut(s)	172, 2145
BfaI	CTAG	8 cut(s)	263, 330, 395, 644, 2024, 2039, 2361, 2385
BfmI	CTRYAG	7 cut(s)	537, 867, 1584, 1626, 1695, 2070, 2301
BfrI	CTTAAG	1 cut(s)	458
BfuI	GTATCC	1 cut(s)	1553
BlnI	CCTAGG	1 cut(s)	394
BmcAI	AGTACT	1 cut(s)	2242
Bme1390I	CCNGG	2 cut(s)	577, 1431
Bme18I	GGWCC	2 cut(s)	988, 1741
BmgBI	CACGTC	2 cut(s)	91, 584
BmgT120I	GGNCC	8 cut(s)	97, 309, 391, 625, 922, 988, 1741, 1891
BmiI	GGNNCC	3 cut(s)	627, 1579, 2473
BmrFI	CCNGG	2 cut(s)	577, 1431
BmrI	ACTGGG	3 cut(s)	306, 1321, 1917
BmsI	GCATC	3 cut(s)	656, 1825, 2074
BmtI	GCTAGC	1 cut(s)	2027
BmuI	ACTGGG	3 cut(s)	306, 1321, 1917
BpiI	GAAGAC	4 cut(s)	535, 776, 1536, 1556
BpmI	CTGGAG	3 cut(s)	801, 900, 966
Bpu10I	CCTNAGC	2 cut(s)	874, 2019
Bpu14I	TTCGAA	1 cut(s)	451
BpuEI	CTTGAG	2 cut(s)	1742, 1884
BsaAI	YACGTR	1 cut(s)	286
BsaBI	GATNNNNATC	1 cut(s)	467
BsaI	GGTCTC	1 cut(s)	172
BsaJI	CCNNGG	3 cut(s)	394, 1435, 1524
BsaXI	ACNNNNNCTCC	4 cut(s)	648, 678, 873, 903
Bsc4I	CCNNNNNNNGG	4 cut(s)	152, 731, 822, 1436
Bse1I	ACTGG	8 cut(s)	312, 784, 794, 1234, 1316, 1365, 1912, 2433
Bse3DI	GCAATG	2 cut(s)	555, 1301
Bse8I	GATNNNNATC	1 cut(s)	467
BseBI	CCWGG	2 cut(s)	577, 1431
BseDI	CCNNGG	3 cut(s)	394, 1435, 1524
BseGI	GGATG	6 cut(s)	110, 673, 769, 1104, 1342, 2179
BseJI	GATNNNNATC	1 cut(s)	467
BseLI	CCNNNNNNNGG	4 cut(s)	152, 731, 822, 1436
BseMI	GCAATG	2 cut(s)	555, 1301
BseMII	CTCAG	3 cut(s)	183, 2258, 2348
BseNI	ACTGG	8 cut(s)	312, 784, 794, 1234, 1316, 1365, 1912, 2433
BseSI	GKGCMC	1 cut(s)	285
BseYI	CCCAGC	1 cut(s)	1544
BsgI	GTGCAG	2 cut(s)	1117, 1341
Bsh1236I	CGCG	1 cut(s)	1281
BshFI	GGCC	8 cut(s)	99, 310, 392, 626, 923, 1161, 1434, 1892
BsiHKAI	GWGCWC	2 cut(s)	285, 1102
BslFI	GGGAC	1 cut(s)	2104
BslI	CCNNNNNNNGG	4 cut(s)	152, 731, 822, 1436
BsmAI	GTCTC	2 cut(s)	172, 2145
BsmFI	GGGAC	1 cut(s)	2104
BsmI	GAATGC	3 cut(s)	1150, 1381, 1440
BsnI	GGCC	8 cut(s)	99, 310, 392, 626, 923, 1161, 1434, 1892
Bso31I	GGTCTC	1 cut(s)	172
Bsp119I	TTCGAA	1 cut(s)	451
Bsp1286I	GDGCHC	2 cut(s)	285, 1102
Bsp143I	GATC	3 cut(s)	34, 1616, 1956
Bsp19I	CCATGG	1 cut(s)	1524
Bsp68I	TCGCGA	1 cut(s)	1281
BspACI	CCGC	5 cut(s)	60, 986, 1013, 2087, 2451
BspANI	GGCC	8 cut(s)	99, 310, 392, 626, 923, 1161, 1434, 1892
BspCNI	CTCAG	3 cut(s)	182, 2257, 2347
BspFNI	CGCG	1 cut(s)	1281
BspLI	GGNNCC	3 cut(s)	627, 1579, 2473
BspMAI	CTGCAG	5 cut(s)	1588, 1630, 1699, 2074, 2305
BspOI	GCTAGC	1 cut(s)	2027
BspPI	GGATC	2 cut(s)	42, 1951
BspQI	GCTCTTC	1 cut(s)	1677
BspT104I	TTCGAA	1 cut(s)	451
BspTI	CTTAAG	1 cut(s)	458
BspTNI	GGTCTC	1 cut(s)	172
BsrDI	GCAATG	2 cut(s)	555, 1301
BsrI	ACTGG	8 cut(s)	312, 784, 794, 1234, 1316, 1365, 1912, 2433
BssECI	CCNNGG	3 cut(s)	394, 1435, 1524
BssMI	GATC	3 cut(s)	34, 1616, 1956
BssNAI	GTATAC	1 cut(s)	370
BssT1I	CCWWGG	3 cut(s)	394, 1435, 1524
Bst1107I	GTATAC	1 cut(s)	370
Bst2UI	CCWGG	2 cut(s)	577, 1431
Bst4CI	ACNGT	9 cut(s)	193, 384, 820, 835, 1516, 1571, 2240, 2294, 2494
Bst6I	CTCTTC	4 cut(s)	912, 1281, 1677, 1758
BstAFI	CTTAAG	1 cut(s)	458
BstBAI	YACGTR	1 cut(s)	286
BstBI	TTCGAA	1 cut(s)	451
BstC8I	GCNNGC	8 cut(s)	829, 1321, 1728, 1965, 2025, 2120, 2357, 2455
BstDEI	CTNAG	6 cut(s)	169, 874, 1063, 2019, 2244, 2334
BstDSI	CCRYGG	1 cut(s)	1524
BstF5I	GGATG	6 cut(s)	110, 673, 769, 1104, 1342, 2179
BstFNI	CGCG	1 cut(s)	1281
BstKTI	GATC	3 cut(s)	37, 1619, 1959
BstMAI	GTCTC	2 cut(s)	172, 2145
BstMBI	GATC	3 cut(s)	34, 1616, 1956
BstNI	CCWGG	2 cut(s)	577, 1431
BstNSI	RCATGY	3 cut(s)	1037, 2097, 2122
BstSCI	CCNGG	2 cut(s)	575, 1429
BstSFI	CTRYAG	7 cut(s)	537, 867, 1584, 1626, 1695, 2070, 2301
BstSLI	GKGCMC	1 cut(s)	285
BstUI	CGCG	1 cut(s)	1281
BstV2I	GAAGAC	4 cut(s)	535, 776, 1536, 1556
BstXI	CCANNNNNNTGG	2 cut(s)	384, 2064
BstZ17I	GTATAC	1 cut(s)	370
BsuI	GTATCC	1 cut(s)	1553
BsuRI	GGCC	8 cut(s)	99, 310, 392, 626, 923, 1161, 1434, 1892
BtgI	CCRYGG	1 cut(s)	1524
BtrI	CACGTC	2 cut(s)	91, 584
BtsCI	GGATG	6 cut(s)	110, 673, 769, 1104, 1342, 2179
BtsI	GCAGTG	3 cut(s)	498, 606, 2231
BtsIMutI	CAGTG	8 cut(s)	389, 498, 606, 816, 831, 1358, 2231, 2440
BtuMI	TCGCGA	1 cut(s)	1281
Cac8I	GCNNGC	8 cut(s)	829, 1321, 1728, 1965, 2025, 2120, 2357, 2455
CaiI	CAGNNNCTG	1 cut(s)	1634
Cfr13I	GGNCC	8 cut(s)	97, 309, 391, 625, 922, 988, 1741, 1891
CseI	GACGC	1 cut(s)	781
Csp6I	GTAC	4 cut(s)	534, 1233, 2099, 2241
CviQI	GTAC	4 cut(s)	534, 1233, 2099, 2241
DdeI	CTNAG	6 cut(s)	169, 874, 1063, 2019, 2244, 2334
DpnI	GATC	3 cut(s)	36, 1618, 1958
DpnII	GATC	3 cut(s)	34, 1616, 1956
DrdI	GACNNNNNNGTC	1 cut(s)	818
DseDI	GACNNNNNNGTC	1 cut(s)	818
Eam1104I	CTCTTC	4 cut(s)	912, 1281, 1677, 1758
EarI	CTCTTC	4 cut(s)	912, 1281, 1677, 1758
EciI	GGCGGA	2 cut(s)	49, 2440
Eco130I	CCWWGG	3 cut(s)	394, 1435, 1524
Eco31I	GGTCTC	1 cut(s)	172
Eco32I	GATATC	1 cut(s)	1468
Eco47I	GGWCC	2 cut(s)	988, 1741
Eco57I	CTGAAG	3 cut(s)	777, 1667, 1782
Eco72I	CACGTG	1 cut(s)	286
EcoRII	CCWGG	2 cut(s)	575, 1429
EcoRV	GATATC	1 cut(s)	1468
EcoT14I	CCWWGG	3 cut(s)	394, 1435, 1524
ErhI	CCWWGG	3 cut(s)	394, 1435, 1524
FaqI	GGGAC	1 cut(s)	2104
FauI	CCCGC	1 cut(s)	2080
FauNDI	CATATG	1 cut(s)	319
FblI	GTMKAC	1 cut(s)	369
FokI	GGATG	6 cut(s)	97, 680, 776, 1091, 1329, 2166
FspBI	CTAG	8 cut(s)	263, 330, 395, 644, 2024, 2039, 2361, 2385
GsaI	CCCAGC	1 cut(s)	1548
GsuI	CTGGAG	3 cut(s)	801, 900, 966
HaeIII	GGCC	8 cut(s)	99, 310, 392, 626, 923, 1161, 1434, 1892
HgaI	GACGC	1 cut(s)	781
HincII	GTYRAC	1 cut(s)	1366
HindII	GTYRAC	1 cut(s)	1366
HphI	GGTGA	6 cut(s)	35, 206, 544, 725, 1027, 1190
Hpy166II	GTNNAC	4 cut(s)	283, 370, 552, 1366
Hpy188I	TCNGA	8 cut(s)	115, 234, 423, 1606, 2161, 2236, 2247, 2337
Hpy188III	TCNNGA	9 cut(s)	139, 1207, 1258, 1280, 1509, 1640, 1901, 2343, 2475
Hpy8I	GTNNAC	4 cut(s)	283, 370, 552, 1366
Hpy99I	CGWCG	1 cut(s)	92
HpyAV	CCTTC	8 cut(s)	192, 740, 1172, 1642, 1762, 1793, 2186, 2376
HpyCH4III	ACNGT	9 cut(s)	193, 384, 820, 835, 1516, 1571, 2240, 2294, 2494
HpyCH4IV	ACGT	5 cut(s)	90, 285, 583, 1154, 1407
HpyF3I	CTNAG	6 cut(s)	169, 874, 1063, 2019, 2244, 2334
HpySE526I	ACGT	5 cut(s)	90, 285, 583, 1154, 1407
Kzo9I	GATC	3 cut(s)	34, 1616, 1956
LguI	GCTCTTC	1 cut(s)	1677
LmnI	GCTCC	3 cut(s)	398, 1047, 1642
LweI	GCATC	3 cut(s)	656, 1825, 2074
MaeI	CTAG	8 cut(s)	263, 330, 395, 644, 2024, 2039, 2361, 2385
MaeII	ACGT	5 cut(s)	90, 285, 583, 1154, 1407
MaeIII	GTNAC	9 cut(s)	212, 579, 848, 1123, 1178, 1999, 2138, 2294, 2444
MalI	GATC	3 cut(s)	36, 1618, 1958
MboI	GATC	3 cut(s)	34, 1616, 1956
MfeI	CAATTG	3 cut(s)	504, 726, 1386
MhlI	GDGCHC	2 cut(s)	285, 1102
MlyI	GAGTC	5 cut(s)	794, 806, 1348, 2008, 2441
MmeI	TCCRAC	2 cut(s)	1544, 2313
MroXI	GAANNNNTTC	1 cut(s)	1504
MslI	CAYNNNNRTG	5 cut(s)	382, 1710, 2263, 2278, 2323
MspA1I	CMGCKG	5 cut(s)	410, 986, 1025, 1355, 2457
MspCI	CTTAAG	1 cut(s)	458
MspR9I	CCNGG	2 cut(s)	577, 1431
MunI	CAATTG	3 cut(s)	504, 726, 1386
Mva1269I	GAATGC	3 cut(s)	1150, 1381, 1440
MvaI	CCWGG	2 cut(s)	577, 1431
MvnI	CGCG	1 cut(s)	1281
NcoI	CCATGG	1 cut(s)	1524
NdeI	CATATG	1 cut(s)	319
NdeII	GATC	3 cut(s)	34, 1616, 1956
NheI	GCTAGC	1 cut(s)	2023
NlaIV	GGNNCC	3 cut(s)	627, 1579, 2473
NmuCI	GTSAC	5 cut(s)	212, 579, 1178, 1999, 2444
NruI	TCGCGA	1 cut(s)	1281
NspI	RCATGY	3 cut(s)	1037, 2097, 2122
NspV	TTCGAA	1 cut(s)	451
OliI	CACNNNNGTG	3 cut(s)	2263, 2278, 2323
PaeI	GCATGC	1 cut(s)	2122
PciI	ACATGT	1 cut(s)	1033
PciSI	GCTCTTC	1 cut(s)	1677
PctI	GAATGC	3 cut(s)	1150, 1381, 1440
PdmI	GAANNNNTTC	1 cut(s)	1504
PfeI	GAWTC	6 cut(s)	229, 266, 448, 572, 1018, 1590
PflMI	CCANNNNNTGG	2 cut(s)	731, 822
PleI	GAGTC	5 cut(s)	793, 806, 1347, 2008, 2441
PmaCI	CACGTG	1 cut(s)	286
PmlI	CACGTG	1 cut(s)	286
PpsI	GAGTC	5 cut(s)	793, 806, 1347, 2008, 2441
Ppu21I	YACGTR	1 cut(s)	286
PscI	ACATGT	1 cut(s)	1033
PsiI	TTATAA	1 cut(s)	2216
Psp6I	CCWGG	2 cut(s)	575, 1429
PspCI	CACGTG	1 cut(s)	286
PspFI	CCCAGC	1 cut(s)	1544
PspGI	CCWGG	2 cut(s)	575, 1429
PspN4I	GGNNCC	3 cut(s)	627, 1579, 2473
PspPI	GGNCC	8 cut(s)	97, 309, 391, 625, 922, 988, 1741, 1891
PstI	CTGCAG	5 cut(s)	1588, 1630, 1699, 2074, 2305
PstNI	CAGNNNCTG	1 cut(s)	1634
PvuII	CAGCTG	4 cut(s)	410, 1025, 1355, 2457
RruI	TCGCGA	1 cut(s)	1281
RsaI	GTAC	4 cut(s)	535, 1234, 2100, 2242
RsaNI	GTAC	4 cut(s)	534, 1233, 2099, 2241
RseI	CAYNNNNRTG	5 cut(s)	382, 1710, 2263, 2278, 2323
SapI	GCTCTTC	1 cut(s)	1677
Sau3AI	GATC	3 cut(s)	34, 1616, 1956
Sau96I	GGNCC	8 cut(s)	97, 309, 391, 625, 922, 988, 1741, 1891
SbfI	CCTGCAGG	1 cut(s)	1588
ScaI	AGTACT	1 cut(s)	2242
SchI	GAGTC	5 cut(s)	794, 806, 1348, 2008, 2441
ScrFI	CCNGG	2 cut(s)	577, 1431
SdaI	CCTGCAGG	1 cut(s)	1588
SduI	GDGCHC	2 cut(s)	285, 1102
SfaNI	GCATC	3 cut(s)	656, 1825, 2074
SfcI	CTRYAG	7 cut(s)	537, 867, 1584, 1626, 1695, 2070, 2301
SfuI	TTCGAA	1 cut(s)	451
SinI	GGWCC	2 cut(s)	988, 1741
SmiMI	CAYNNNNRTG	5 cut(s)	382, 1710, 2263, 2278, 2323
SmlI	CTYRAG	3 cut(s)	458, 1721, 1899
SmoI	CTYRAG	3 cut(s)	458, 1721, 1899
SphI	GCATGC	1 cut(s)	2122
Sse8387I	CCTGCAGG	1 cut(s)	1588
SsiI	CCGC	5 cut(s)	60, 986, 1013, 2087, 2451
SspMI	CTAG	8 cut(s)	263, 330, 395, 644, 2024, 2039, 2361, 2385
StyD4I	CCNGG	2 cut(s)	575, 1429
StyI	CCWWGG	3 cut(s)	394, 1435, 1524
TaaI	ACNGT	9 cut(s)	193, 384, 820, 835, 1516, 1571, 2240, 2294, 2494
TaiI	ACGT	5 cut(s)	93, 288, 586, 1157, 1410
TaqI	TCGA	7 cut(s)	87, 446, 451, 1188, 1337, 1615, 2408
TatI	WGTACW	1 cut(s)	2240
TfiI	GAWTC	6 cut(s)	229, 266, 448, 572, 1018, 1590
TscAI	CASTG	8 cut(s)	389, 498, 606, 823, 838, 1365, 2231, 2440
TseFI	GTSAC	5 cut(s)	212, 579, 1178, 1999, 2444
Tsp45I	GTSAC	5 cut(s)	212, 579, 1178, 1999, 2444
TspDTI	ATGAA	8 cut(s)	80, 263, 267, 446, 1433, 1800, 2168, 2417
TspRI	CASTG	8 cut(s)	389, 498, 606, 823, 838, 1365, 2231, 2440
Van91I	CCANNNNNTGG	2 cut(s)	731, 822
Vha464I	CTTAAG	1 cut(s)	458
VneI	GTGCAC	1 cut(s)	281
VpaK11BI	GGWCC	2 cut(s)	988, 1741
XapI	RAATTY	5 cut(s)	1191, 1415, 1423, 1787, 1878
XceI	RCATGY	3 cut(s)	1037, 2097, 2122
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1442, 2377
XmaJI	CCTAGG	1 cut(s)	394
XmiI	GTMKAC	1 cut(s)	369
XmnI	GAANNNNTTC	1 cut(s)	1504
XspI	CTAG	8 cut(s)	263, 330, 395, 644, 2024, 2039, 2361, 2385
ZrmI	AGTACT	1 cut(s)	2242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.