Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001793

Physical Location & Seq

Genomic Coordinates Reverse (-)

5698131 .. 5706669

Gene Structure 8539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G078700.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3204 bp

ATGGCTGCCCAGGACAAGGACAAGGCAGCAGCCAAAAAGTTTCAGAAAAGCTACTTTGATGTGCTGGGGTTGTGCTGTTCATCAGAAGTTCCACTGGTTGAGAATATCCTGAAGCCTCTTGAGGGTGTGAAAGAGGTGTCAGTGATTGTGCCTTCTAGAACTGTTATCGTTGTCCATGACAGCCTCCTCATTTCCCAGATTCAAATTGTTAAGGCATTAAACCAAGCAAGGCTAGAAGCAAATGTGAGATTGTATGGGGCAGAGGACAATTACAAGAAAAAGTGGCCAAGTCCATATGCAATTGCTAGTGGCGTGCTACTCTTGCTATCATTTTTGAAGTATGCATATCGGCCATTGGGGTGGTTGGCCCTTGGAGCGGTGGTCGTTGGCATTTTCCCTATTGCCATGAAAGGCGTGGCGGCCATTCGGCATCTTAGGCTAGACATCAACATTCTTGTTATCGTTGCTGTGATTGGGACAATTGCTTTGAATGACTATATGGAAGCTGGAACTATTGTCTTTCTGTTCACTGTTGCAGAGTGGCTTGAGTCAAGGGCAGGTCACAGGGCAAAAGCCGTGATGTCGTCGTTGATGAGCATGGCTCCTCAGAAAGCAGTCTTAGCAGAAACCGGTGAGGTTGTGGATGTCGACGAGGTCAAGTTGAACACAACTGTTGCTGTTAAGGCTGGTGAAGTTATCCCAATTGATGGGATAGTTGTTGAAGGCAAAGGTGAAGTGGATGAGAAGACACTAACTGGAGAATCCTATCCAGTTGCCAAAGAAAAGGACTCTACTGTTTGGGCTGGCACCATCAATCTCAATGGTTACCTTAGTGTGAAAACTACAGCCTTAGCTGAAGACTGCGCCGTTGCTAAAATGGCAAAACTTGTGGAAGAGGCTCAAAACAGCAAAACCAGAACTCAGAGATTCATTGACAAATGTGCAAAGTTTTATACCCCATCCGTCCTAGTCATATCTGTTTCTATTGCCGTGATTCCAGCGGCATTGCATGTCCATAATTGGAGCAAATGGTTTCACTTAGCTTTGGTTGTGTTAGTGAGCGCATGTCCATGTGCTCTCATTCTCTCTACACCTGTTGTGACTTTCTGTACGCTTACAAAAGCGGCAACGTCTGGTCTTCTAATCAAAGGGGGTGACTACATTGAGGTTCTGGCTAAAGTCAAAATCATGGCTTTTGACAAAACTGGTACAATAACAAGTGGTGAATTTGTGGTGATTGATTTTCAGTCTCTTCGTGATGACATTAGCTTGAACACATTGCTTTACTGGGTTGCAAGCATTGAGAGGAAGTCAAGTCATCCAATGGCAGATGCACTGGTTGACTATGGAAGATCGCATTCGGTTGAGCCAAAACCGGAAAATGTAGAGGAGTTTCAAAATTTTCCTGGGGAAGGCATTCATGGGAAAATTGATGGACAATATATCTATATTGGAAACAGAAAAATAGCTTTGAGAGCTAATTGTGTAACAGTTCCAACCATTGAAGGTCGTAAGGGTGGGAAGACCATTGGATACATATACTCTGGAGGAACCCCTGCCGGAATCTTTACAATATCTGATACTTGTCGATCTGGGGCTGCAGAGGCTTGCAGGGAGTTGAAGAAGTTGGGCATTAAAACAGCTATGCTCACAGGAGATAGTCATGCCGCAGCATTGCATGCAAATGAGCAGCTTAAGCAAGCTCTTGAGGTAGTCCATGCAGAACTTCTACCAGAAGACAAGGCAAGAATCATTACAGAATTTAAGACAGAAGGAAGTACAGCGATGGTCGGAGATGGTATCAACGATGCCCCAGCTTTAGCTACAGCTGATATCGGTATCTCAATGGGCATTTCTGGATCAGCCCTTGCTCAAGAAACTGGGAACATAATTCTACTGTCAAATGACATCAGAAAACTAGCAAAAGCAGTCAAGCATGCCAGAAGAGCTAATAGAAAAGTGATTCAGAATGTGGTTTTGTCAATCACTACTAAGGTTGCAATCCTTGCACTGGGATTTGCAGGTCATCCACTTGTTTGGGCTGCAGTGCTTGCTGATGTTGGGACATGCATGCTTGTGATCCTCAACAGCATGCTACTTTTAAAAGGAACCGAAAAGCATGGAGGCAAATGTGGAAAAAATTCTTCTGCGCCACATGCTCATAAACATGGAAGCCATGGACATAGCCACTCTCACAAAAATCAGCATTGTTGCTCTGAGAGCAAAGCTGTAAAAGCCTGCAAGCCTCAAAAGTGTTCTTCCCAGAAGTGTGGATCAGAATGCCAACCTAGTCCTTTGAATTCGAGCTTGCCTGGTAATCATAAGCACGATGATGACTTACACAAGGCAAGGCATTGTGATGGAGCAAGCTGCATGAAACTCAATCGTGATCTGGAGTCACAGAACAAACACAACCATGGTTGTTCAAGGCCTCACAATTTGAGCTCATGTGCAGAAGATGGTTGCACAGACTTGGTTGGAAGCCATGGAAATTGTGCAGAAGGTGATAAAATCCATGAGGAAAAACACTGCAACCATTCTACTCTCTTGGAGGAAAACCAAAAACCTATAAGCAATAGTCATTGCCACTCAACCCACTGTGGCAAAGAGCATAGCAGAAATGAAGGTGATGGGCTCCATGAGGTGAATCACCGCAATCGTTCTGATTTTCCTTTGGAGGTAAGCCAGAAATCTGCAAGCACTGCTCATTGCCACTCAAGCCACTGTGGCAAAGAGCATGGCACAAAGCAAGGTCATGGACTCCATGAGGCAAAACACTGCAATCATTCTGCTTTTCCCTTGGAGGAAAGCAAAAACTTGGCAAGTTTTGGTCATTGCCACCCAACCCATTGTGGCAAAGATCATATTGGCAATGAAGCATCAGGAAAATCGGCTGGAACAAGCTGTGATCATCAGCACCACCACCATAATCTAGATGAAAAAACACCTCCTCACACAGCCATTGATATCGTACCAGGCAATGACCACACAGAATCATCCCCTACGCACTCTTGCATCAGTTCAGGGACAAGAGAAGAGGAAGCGTGTTGCTCGAAATCAGTGGCAATTCATGCTTGTGTATTAGAGAAGAGAGAAGTAGGAGGGTGCTGCAAAAGCTACATGAAGGAATGCTGTGGTGGTCATGGGCATATTGGGCCTAGCTTTAAAGGTTGTTTATCAGAAATAACTACTGAACAGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006950 GO:0008150 GO:0009506 GO:0009636 GO:0010035 GO:0010038 GO:0010043 GO:0015691 GO:0016020 GO:0030001 GO:0030054 GO:0031090 GO:0032025 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0061687 GO:0065007 GO:0065008 GO:0070838 GO:0071585 GO:0071944 GO:0072507 GO:0072511 GO:0097501 GO:0098588 GO:0098754 GO:0098771 GO:0098805 GO:1990170

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

1068

Amino Acids

114.78

Weight (kDa)

7.45

Isoelectric Point (pI)

36.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19110 AT2G19110 AT2G19110 AT4G30110 AT4G30110 AT4G30120 AT4G30120
fragaria_vesca	FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520
malus_domestica	MD00G1104400.v1.1 MD01G1183400.v1.1 MD01G1183700.v1.1 MD01G1184000.v1.1 MD01G1184300.v1.1 MD13G1244500.v1.1 MD16G1252700.v1.1
prunus_persica	Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1
pyrus_communis	pycom13g21550 pycom16g21330
rosa_chinensis	RchiOBHm_Chr2g0143431 RchiOBHm_Chr4g0400101
rosa_laevigata	RLG00000009214 RLG00000020035
rosa_multiflora	Rmu_sc0000037.1_g000006
rosa_roxburghii	Rroxscaffold_2G00101850 Rroxscaffold_5G00345040 Rroxscaffold_5G00345070
rosa_rugosa	Rorug02G0381400 Rorug04G0022600 Rorug04G0022600
rosa_samantha	Rh2AG434400 Rh2BG442200 Rh2CG420300 Rh2DG452400 Rh4BG096400 Rh4CG107500 Rh4DG093000
rosa_wichuraiana	Rw2G035400 Rw4G008180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	548, 2012
AccB1I	GGYRCC	1 cut(s)	806
AccB7I	CCANNNNNTGG	1 cut(s)	707
AccBSI	CCGCTC	1 cut(s)	377
AccI	GTMKAC	1 cut(s)	648
AciI	CCGC	6 cut(s)	377, 419, 1001, 1124, 1668, 2653
AclWI	GGATC	3 cut(s)	1867, 2074, 2281
AcoI	YGGCCR	3 cut(s)	284, 350, 420
AcsI	RAATTY	5 cut(s)	1226, 1399, 1760, 2140, 2299
AcuI	CTGAAG	2 cut(s)	131, 876
AfaI	GTAC	4 cut(s)	1111, 1210, 1780, 2973
AfiI	CCNNNNNNNGG	6 cut(s)	16, 122, 376, 707, 1412, 2011
AflII	CTTAAG	1 cut(s)	1694
AgeI	ACCGGT	1 cut(s)	629
AjnI	CCWGG	4 cut(s)	9, 1405, 2311, 2974
Alw21I	GWGCWC	2 cut(s)	1078, 2447
Alw26I	GTCTC	1 cut(s)	1254
AlwI	GGATC	3 cut(s)	1867, 2074, 2281
AoxI	GGCC	6 cut(s)	284, 350, 366, 420, 2429, 3155
ApeKI	GCWGC	9 cut(s)	5, 26, 29, 1598, 1670, 1690, 2042, 2370, 3108
ApoI	RAATTY	5 cut(s)	1226, 1399, 1760, 2140, 2299
ArsI	GACNNNNNNTTYG	2 cut(s)	469, 501
AsiGI	ACCGGT	1 cut(s)	629
Asp700I	GAANNNNTTC	2 cut(s)	1416, 2140
AspLEI	GCGC	3 cut(s)	866, 1064, 2152
AspS9I	GGNCC	2 cut(s)	367, 3155
BalI	TGGCCA	1 cut(s)	286
BanI	GGYRCC	1 cut(s)	806
BanII	GRGCYC	2 cut(s)	2447, 2637
BbsI	GAAGAC	5 cut(s)	752, 864, 1130, 1529, 1743
Bbv12I	GWGCWC	2 cut(s)	1078, 2447
BbvI	GCAGC	8 cut(s)	38, 41, 1585, 1682, 1702, 2029, 2357, 3095
BccI	CCATC	9 cut(s)	701, 818, 967, 1427, 1780, 1790, 2354, 2453, 2624
BceAI	ACGGC	3 cut(s)	560, 851, 974
BciT130I	CCWGG	4 cut(s)	11, 1407, 2313, 2976
BciVI	GTATCC	1 cut(s)	1526
BclI	TGATCA	1 cut(s)	2908
BcoDI	GTCTC	1 cut(s)	1254
BfaI	CTAG	9 cut(s)	156, 233, 306, 440, 968, 1919, 2289, 2933, 3159
BfmI	CTRYAG	4 cut(s)	843, 1599, 1824, 2043
BfrI	CTTAAG	1 cut(s)	1694
BfuAI	ACCTGC	2 cut(s)	548, 2012
BfuI	GTATCC	1 cut(s)	1526
BglI	GCCNNNNNGGC	1 cut(s)	2727
Bme1390I	CCNGG	4 cut(s)	11, 1407, 2313, 2976
BmgT120I	GGNCC	2 cut(s)	367, 3155
BmiI	GGNNCC	5 cut(s)	603, 808, 1552, 2110, 2636
BmrFI	CCNGG	4 cut(s)	11, 1407, 2313, 2976
BmrI	ACTGGG	3 cut(s)	1297, 1890, 2021
BmsI	GCATC	5 cut(s)	439, 1321, 1798, 2888, 3024
BmuI	ACTGGG	3 cut(s)	1297, 1890, 2021
BpiI	GAAGAC	5 cut(s)	752, 864, 1130, 1529, 1743
BplI	GAGNNNNNCTC	2 cut(s)	586, 618
BpmI	CTGGAG	3 cut(s)	777, 1566, 2414
Bpu10I	CCTNAGC	1 cut(s)	850
BpuEI	CTTGAG	5 cut(s)	140, 566, 1727, 1857, 2701
BsaJI	CCNNGG	7 cut(s)	9, 370, 1406, 2176, 2416, 2485, 2799
BsaWI	WCCGGW	2 cut(s)	629, 1375
BsaXI	ACNNNNNCTCC	2 cut(s)	366, 396
Bsc4I	CCNNNNNNNGG	6 cut(s)	16, 122, 376, 707, 1412, 2011
Bse118I	RCCGGY	1 cut(s)	629
Bse1I	ACTGG	8 cut(s)	99, 760, 770, 1210, 1292, 1341, 1885, 2016
Bse3DI	GCAATG	8 cut(s)	1004, 1277, 1673, 2581, 2707, 2833, 2878, 2986
BseBI	CCWGG	4 cut(s)	11, 1407, 2313, 2976
BseDI	CCNNGG	7 cut(s)	9, 370, 1406, 2176, 2416, 2485, 2799
BseGI	GGATG	6 cut(s)	649, 745, 959, 1318, 2026, 2996
BseLI	CCNNNNNNNGG	6 cut(s)	16, 122, 376, 707, 1412, 2011
BseMI	GCAATG	8 cut(s)	1004, 1277, 1673, 2581, 2707, 2833, 2878, 2986
BseMII	CTCAG	3 cut(s)	620, 935, 2208
BseNI	ACTGG	8 cut(s)	99, 760, 770, 1210, 1292, 1341, 1885, 2016
BseRI	GAGGAG	4 cut(s)	176, 594, 1403, 2940
BseXI	GCAGC	8 cut(s)	38, 41, 1585, 1682, 1702, 2029, 2357, 3095
BseYI	CCCAGC	2 cut(s)	64, 1813
BsgI	GTGCAG	2 cut(s)	2472, 2517
BshFI	GGCC	6 cut(s)	286, 352, 368, 422, 2431, 3157
BshNI	GGYRCC	1 cut(s)	806
BshTI	ACCGGT	1 cut(s)	629
BsiHKAI	GWGCWC	2 cut(s)	1078, 2447
BsiSI	CCGG	3 cut(s)	630, 1376, 1560
BslFI	GGGAC	3 cut(s)	490, 2077, 3040
BslI	CCNNNNNNNGG	6 cut(s)	16, 122, 376, 707, 1412, 2011
BsmAI	GTCTC	1 cut(s)	1254
BsmFI	GGGAC	3 cut(s)	490, 2077, 3040
BsmI	GAATGC	4 cut(s)	1357, 1416, 2285, 3134
BsnI	GGCC	6 cut(s)	286, 352, 368, 422, 2431, 3157
Bsp1286I	GDGCHC	3 cut(s)	1078, 2447, 2637
Bsp143I	GATC	8 cut(s)	1352, 1589, 1859, 2079, 2273, 2389, 2860, 2908
Bsp19I	CCATGG	3 cut(s)	2176, 2416, 2485
BspACI	CCGC	6 cut(s)	377, 419, 1001, 1124, 1668, 2653
BspANI	GGCC	6 cut(s)	286, 352, 368, 422, 2431, 3157
BspCNI	CTCAG	3 cut(s)	619, 934, 2209
BspLI	GGNNCC	5 cut(s)	603, 808, 1552, 2110, 2636
BspMAI	CTGCAG	2 cut(s)	1603, 2047
BspMI	ACCTGC	2 cut(s)	548, 2012
BspPI	GGATC	3 cut(s)	1867, 2074, 2281
BspQI	GCTCTTC	1 cut(s)	1939
BspT107I	GGYRCC	1 cut(s)	806
BspTI	CTTAAG	1 cut(s)	1694
BsrBI	CCGCTC	1 cut(s)	377
BsrDI	GCAATG	8 cut(s)	1004, 1277, 1673, 2581, 2707, 2833, 2878, 2986
BsrFI	RCCGGY	1 cut(s)	629
BsrI	ACTGG	8 cut(s)	99, 760, 770, 1210, 1292, 1341, 1885, 2016
BssAI	RCCGGY	1 cut(s)	629
BssECI	CCNNGG	7 cut(s)	9, 370, 1406, 2176, 2416, 2485, 2799
BssMI	GATC	8 cut(s)	1352, 1589, 1859, 2079, 2273, 2389, 2860, 2908
BssT1I	CCWWGG	5 cut(s)	370, 2176, 2416, 2485, 2799
Bst2UI	CCWGG	4 cut(s)	11, 1407, 2313, 2976
Bst4CI	ACNGT	8 cut(s)	163, 532, 673, 796, 1492, 1899, 2600, 2726
Bst6I	CTCTTC	5 cut(s)	888, 1257, 1939, 3030, 3083
BstAFI	CTTAAG	1 cut(s)	1694
BstAPI	GCANNNNNTGC	5 cut(s)	1679, 2006, 2051, 2702, 3071
BstDEI	CTNAG	9 cut(s)	434, 606, 619, 830, 850, 921, 1039, 1992, 2217
BstDSI	CCRYGG	3 cut(s)	2176, 2416, 2485
BstEII	GGTNACC	1 cut(s)	824
BstENI	CCTNNNNNAGG	1 cut(s)	1410
BstF5I	GGATG	6 cut(s)	649, 745, 959, 1318, 2026, 2996
BstHHI	GCGC	3 cut(s)	866, 1064, 2152
BstKTI	GATC	8 cut(s)	1355, 1592, 1862, 2082, 2276, 2392, 2863, 2911
BstMAI	GTCTC	1 cut(s)	1254
BstMBI	GATC	8 cut(s)	1352, 1589, 1859, 2079, 2273, 2389, 2860, 2908
BstNI	CCWGG	4 cut(s)	11, 1407, 2313, 2976
BstNSI	RCATGY	8 cut(s)	1013, 1068, 1682, 1940, 2070, 2074, 2095, 2159
BstPI	GGTNACC	1 cut(s)	824
BstSCI	CCNGG	4 cut(s)	9, 1405, 2311, 2974
BstSFI	CTRYAG	4 cut(s)	843, 1599, 1824, 2043
BstV1I	GCAGC	8 cut(s)	38, 41, 1585, 1682, 1702, 2029, 2357, 3095
BstV2I	GAAGAC	5 cut(s)	752, 864, 1130, 1529, 1743
BstXI	CCANNNNNNTGG	3 cut(s)	360, 2037, 2270
BsuI	GTATCC	1 cut(s)	1526
BsuRI	GGCC	6 cut(s)	286, 352, 368, 422, 2431, 3157
BtgI	CCRYGG	3 cut(s)	2176, 2416, 2485
BtgZI	GCGATG	1 cut(s)	1799
BtsCI	GGATG	6 cut(s)	649, 745, 959, 1318, 2026, 2996
BtsI	GCAGTG	4 cut(s)	2052, 2527, 2700, 2776
BveI	ACCTGC	2 cut(s)	548, 2012
CfoI	GCGC	3 cut(s)	866, 1064, 2152
Cfr10I	RCCGGY	1 cut(s)	629
Cfr13I	GGNCC	2 cut(s)	367, 3155
Csp6I	GTAC	4 cut(s)	1110, 1209, 1779, 2972
CspAI	ACCGGT	1 cut(s)	629
CspCI	CAANNNNNGTGG	2 cut(s)	870, 905
CviQI	GTAC	4 cut(s)	1110, 1209, 1779, 2972
DdeI	CTNAG	9 cut(s)	434, 606, 619, 830, 850, 921, 1039, 1992, 2217
DpnI	GATC	8 cut(s)	1354, 1591, 1861, 2081, 2275, 2391, 2862, 2910
DpnII	GATC	8 cut(s)	1352, 1589, 1859, 2079, 2273, 2389, 2860, 2908
DraI	TTTAAA	2 cut(s)	2103, 3166
EaeI	YGGCCR	3 cut(s)	284, 350, 420
Eam1104I	CTCTTC	5 cut(s)	888, 1257, 1939, 3030, 3083
EarI	CTCTTC	5 cut(s)	888, 1257, 1939, 3030, 3083
Ecl136II	GAGCTC	1 cut(s)	2445
Eco130I	CCWWGG	5 cut(s)	370, 2176, 2416, 2485, 2799
Eco147I	AGGCCT	1 cut(s)	2431
Eco24I	GRGCYC	2 cut(s)	2447, 2637
Eco32I	GATATC	2 cut(s)	1834, 2968
Eco53kI	GAGCTC	1 cut(s)	2445
Eco57I	CTGAAG	2 cut(s)	131, 876
Eco91I	GGTNACC	1 cut(s)	824
EcoICRI	GAGCTC	1 cut(s)	2445
EcoNI	CCTNNNNNAGG	1 cut(s)	1410
EcoO65I	GGTNACC	1 cut(s)	824
EcoRI	GAATTC	1 cut(s)	2299
EcoRII	CCWGG	4 cut(s)	9, 1405, 2311, 2974
EcoRV	GATATC	2 cut(s)	1834, 2968
EcoT14I	CCWWGG	5 cut(s)	370, 2176, 2416, 2485, 2799
EcoT22I	ATGCAT	2 cut(s)	346, 2072
EcoT38I	GRGCYC	2 cut(s)	2447, 2637
ErhI	CCWWGG	5 cut(s)	370, 2176, 2416, 2485, 2799
FaqI	GGGAC	3 cut(s)	490, 2077, 3040
FauNDI	CATATG	1 cut(s)	295
FbaI	TGATCA	1 cut(s)	2908
FblI	GTMKAC	1 cut(s)	648
FokI	GGATG	6 cut(s)	656, 752, 946, 1305, 2013, 2983
FriOI	GRGCYC	2 cut(s)	2447, 2637
FspBI	CTAG	9 cut(s)	156, 233, 306, 440, 968, 1919, 2289, 2933, 3159
GlaI	GCGC	3 cut(s)	865, 1063, 2151
GsaI	CCCAGC	2 cut(s)	68, 1817
GsuI	CTGGAG	3 cut(s)	777, 1566, 2414
HaeIII	GGCC	6 cut(s)	286, 352, 368, 422, 2431, 3157
HapII	CCGG	3 cut(s)	630, 1376, 1560
HhaI	GCGC	3 cut(s)	866, 1064, 2152
Hin6I	GCGC	3 cut(s)	864, 1062, 2150
HinP1I	GCGC	3 cut(s)	864, 1062, 2150
HincII	GTYRAC	2 cut(s)	649, 1342
HindII	GTYRAC	2 cut(s)	649, 1342
HpaII	CCGG	3 cut(s)	630, 1376, 1560
Hpy166II	GTNNAC	3 cut(s)	528, 649, 1342
Hpy8I	GTNNAC	3 cut(s)	528, 649, 1342
Hpy99I	CGWCG	2 cut(s)	589, 653
HpyAV	CCTTC	8 cut(s)	162, 716, 1406, 1499, 1766, 2495, 2618, 3118
HpyCH4III	ACNGT	8 cut(s)	163, 532, 673, 796, 1492, 1899, 2600, 2726
HpyCH4IV	ACGT	1 cut(s)	1130
HpyF3I	CTNAG	9 cut(s)	434, 606, 619, 830, 850, 921, 1039, 1992, 2217
HpySE526I	ACGT	1 cut(s)	1130
HspAI	GCGC	3 cut(s)	864, 1062, 2150
Ksp22I	TGATCA	1 cut(s)	2908
Kzo9I	GATC	8 cut(s)	1352, 1589, 1859, 2079, 2273, 2389, 2860, 2908
LguI	GCTCTTC	1 cut(s)	1939
LmnI	GCTCC	5 cut(s)	374, 607, 1023, 2363, 2640
Lsp1109I	GCAGC	8 cut(s)	38, 41, 1585, 1682, 1702, 2029, 2357, 3095
LweI	GCATC	5 cut(s)	439, 1321, 1798, 2888, 3024
MaeI	CTAG	9 cut(s)	156, 233, 306, 440, 968, 1919, 2289, 2933, 3159
MaeII	ACGT	1 cut(s)	1130
MaeIII	GTNAC	6 cut(s)	560, 824, 1099, 1154, 1486, 2397
MalI	GATC	8 cut(s)	1354, 1591, 1861, 2081, 2275, 2391, 2862, 2910
MbiI	CCGCTC	1 cut(s)	377
MboI	GATC	8 cut(s)	1352, 1589, 1859, 2079, 2273, 2389, 2860, 2908
MfeI	CAATTG	3 cut(s)	300, 480, 702
MhlI	GDGCHC	3 cut(s)	1078, 2447, 2637
MlsI	TGGCCA	1 cut(s)	286
MluNI	TGGCCA	1 cut(s)	286
MlyI	GAGTC	4 cut(s)	557, 782, 2405, 2754
MmeI	TCCRAC	3 cut(s)	1520, 1771, 2458
Mox20I	TGGCCA	1 cut(s)	286
Mph1103I	ATGCAT	2 cut(s)	346, 2072
MroXI	GAANNNNTTC	2 cut(s)	1416, 2140
MscI	TGGCCA	1 cut(s)	286
MseI	TTAA	8 cut(s)	210, 218, 681, 1635, 1695, 1764, 2102, 3165
MslI	CAYNNNNRTG	9 cut(s)	358, 1069, 1683, 2075, 2166, 2331, 2358, 2415, 3075
Msp20I	TGGCCA	1 cut(s)	286
MspA1I	CMGCKG	2 cut(s)	1001, 1829
MspCI	CTTAAG	1 cut(s)	1694
MspI	CCGG	3 cut(s)	630, 1376, 1560
MspR9I	CCNGG	4 cut(s)	11, 1407, 2313, 2976
MunI	CAATTG	3 cut(s)	300, 480, 702
Mva1269I	GAATGC	4 cut(s)	1357, 1416, 2285, 3134
MvaI	CCWGG	4 cut(s)	11, 1407, 2313, 2976
NcoI	CCATGG	3 cut(s)	2176, 2416, 2485
NdeI	CATATG	1 cut(s)	295
NdeII	GATC	8 cut(s)	1352, 1589, 1859, 2079, 2273, 2389, 2860, 2908
NlaIV	GGNNCC	5 cut(s)	603, 808, 1552, 2110, 2636
NmuCI	GTSAC	4 cut(s)	560, 1099, 1154, 2397
NsiI	ATGCAT	2 cut(s)	346, 2072
NspI	RCATGY	8 cut(s)	1013, 1068, 1682, 1940, 2070, 2074, 2095, 2159
PaeI	GCATGC	4 cut(s)	1682, 1940, 2074, 2095
PceI	AGGCCT	1 cut(s)	2431
PciSI	GCTCTTC	1 cut(s)	1939
PctI	GAATGC	4 cut(s)	1357, 1416, 2285, 3134
PdmI	GAANNNNTTC	2 cut(s)	1416, 2140
PfeI	GAWTC	9 cut(s)	199, 761, 927, 994, 1563, 1749, 1963, 2647, 2993
PflFI	GACNNNGTC	1 cut(s)	653
PflMI	CCANNNNNTGG	1 cut(s)	707
PinAI	ACCGGT	1 cut(s)	629
PleI	GAGTC	4 cut(s)	556, 782, 2404, 2754
PpsI	GAGTC	4 cut(s)	556, 782, 2404, 2754
Psp124BI	GAGCTC	1 cut(s)	2447
Psp6I	CCWGG	4 cut(s)	9, 1405, 2311, 2974
PspEI	GGTNACC	1 cut(s)	824
PspFI	CCCAGC	2 cut(s)	64, 1813
PspGI	CCWGG	4 cut(s)	9, 1405, 2311, 2974
PspN4I	GGNNCC	5 cut(s)	603, 808, 1552, 2110, 2636
PspPI	GGNCC	2 cut(s)	367, 3155
PstI	CTGCAG	2 cut(s)	1603, 2047
PsyI	GACNNNGTC	1 cut(s)	653
PvuII	CAGCTG	1 cut(s)	1829
RsaI	GTAC	4 cut(s)	1111, 1210, 1780, 2973
RsaNI	GTAC	4 cut(s)	1110, 1209, 1779, 2972
RseI	CAYNNNNRTG	9 cut(s)	358, 1069, 1683, 2075, 2166, 2331, 2358, 2415, 3075
SacI	GAGCTC	1 cut(s)	2447
SalI	GTCGAC	1 cut(s)	647
SapI	GCTCTTC	1 cut(s)	1939
SaqAI	TTAA	8 cut(s)	210, 218, 681, 1635, 1695, 1764, 2102, 3165
Sau3AI	GATC	8 cut(s)	1352, 1589, 1859, 2079, 2273, 2389, 2860, 2908
Sau96I	GGNCC	2 cut(s)	367, 3155
SchI	GAGTC	4 cut(s)	557, 782, 2405, 2754
ScrFI	CCNGG	4 cut(s)	11, 1407, 2313, 2976
SduI	GDGCHC	3 cut(s)	1078, 2447, 2637
SfaNI	GCATC	5 cut(s)	439, 1321, 1798, 2888, 3024
SfcI	CTRYAG	4 cut(s)	843, 1599, 1824, 2043
SmiMI	CAYNNNNRTG	9 cut(s)	358, 1069, 1683, 2075, 2166, 2331, 2358, 2415, 3075
SmlI	CTYRAG	6 cut(s)	119, 545, 1694, 1706, 1872, 2716
SmoI	CTYRAG	6 cut(s)	119, 545, 1694, 1706, 1872, 2716
SphI	GCATGC	4 cut(s)	1682, 1940, 2074, 2095
SseBI	AGGCCT	1 cut(s)	2431
SsiI	CCGC	6 cut(s)	377, 419, 1001, 1124, 1668, 2653
SspMI	CTAG	9 cut(s)	156, 233, 306, 440, 968, 1919, 2289, 2933, 3159
SstI	GAGCTC	1 cut(s)	2447
StuI	AGGCCT	1 cut(s)	2431
StyD4I	CCNGG	4 cut(s)	9, 1405, 2311, 2974
StyI	CCWWGG	5 cut(s)	370, 2176, 2416, 2485, 2799
TaaI	ACNGT	8 cut(s)	163, 532, 673, 796, 1492, 1899, 2600, 2726
TaiI	ACGT	1 cut(s)	1133
TaqI	TCGA	4 cut(s)	648, 1588, 2303, 3053
TatI	WGTACW	1 cut(s)	1778
TauI	GCSGC	4 cut(s)	422, 1004, 1127, 1670
TfiI	GAWTC	9 cut(s)	199, 761, 927, 994, 1563, 1749, 1963, 2647, 2993
Tru1I	TTAA	8 cut(s)	210, 218, 681, 1635, 1695, 1764, 2102, 3165
Tru9I	TTAA	8 cut(s)	210, 218, 681, 1635, 1695, 1764, 2102, 3165
TseFI	GTSAC	4 cut(s)	560, 1099, 1154, 2397
TseI	GCWGC	9 cut(s)	5, 26, 29, 1598, 1670, 1690, 2042, 2370, 3108
Tsp45I	GTSAC	4 cut(s)	560, 1099, 1154, 2397
TspGWI	ACGGA	1 cut(s)	952
Tth111I	GACNNNGTC	1 cut(s)	653
Van91I	CCANNNNNTGG	1 cut(s)	707
Vha464I	CTTAAG	1 cut(s)	1694
XagI	CCTNNNNNAGG	1 cut(s)	1410
XapI	RAATTY	5 cut(s)	1226, 1399, 1760, 2140, 2299
XbaI	TCTAGA	2 cut(s)	155, 2932
XceI	RCATGY	8 cut(s)	1013, 1068, 1682, 1940, 2070, 2074, 2095, 2159
XcmI	CCANNNNNNNNNTGG	1 cut(s)	412
XmiI	GTMKAC	1 cut(s)	648
XmnI	GAANNNNTTC	2 cut(s)	1416, 2140
XspI	CTAG	9 cut(s)	156, 233, 306, 440, 968, 1919, 2289, 2933, 3159
Zsp2I	ATGCAT	2 cut(s)	346, 2072

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.