Rroxscaffold_5G00374110

Nucleoporin GLE1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0009553
Physical Location & Seq
Forward (+)
55178166 .. 55186110
7945 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00374110.1

Sequence Viewer

Length: 1923 bp
ATGTCTCTACGCGACAAGCGACCGAAGCAACGCGTTTCCGAGTTGCCGCGCCACGGGTCAAACATCCGTCCTTCACTTCCGGGAGGTGTTAAGTTGGAACTTCGTTGTCCCAAAAAAGTATACAGTGTTGCTATTGACCCTAACCCTGATTGGACCTTTGAGGATCTAGTTTCGGAGCTAAATGCCCTCGAAATCAAGATCAACAGCGGTTCTAAGGTTCCACTCCCATTTGCTAAAGATAAATCAAGGGATATATCCAATTGGAAGAGTAATGGGAGAAACTCTAGTAGCCCGTTTGTTATGCGTGTGTTCGACGATGACATGGACAACATTGACGCCGAAGATGAGGAGGTTCATGATCAGAAATCCATGGTTGCTAAACGGTTTAATTTTGATGAACTCTATCTCAGTGACAGTGATGATTCTGGTGACGAATCATCTTTTGGCGCCGAACCATACCTAATGGAGAAGGTTGATCTAGTGGAAAGTGGTTTGCTCGAGCTATCCCGTGAACATCAGTTCAAAGTTAAGGAGGAAATTAGGAACCAAATATCAGCATTAGAGACAGAGCTGAAGAGTGAAACTGACAAGTCTATTTCTGCACTTGTTCGAGTTGAGAAATATAGAAAAGAAAGATCTGAAATGGATAGAAAACTAGACACTCAATATCAACGCAAGATAGCGGAAGCACTTGATAATCACTTAACTGTTGTCCAGCGAGACCTTGAAGTCAGATCTCAAATAGAAGAAAGAAAAATAAGAATTGATGCAGCTTATGAAGATGCTAAACGAAAGGAAGCTGAAGAAAAGCTTCGACAAGAACGAGCTAAAGCGGAAGCTGAGGCAAAAAGAGTTGAGGAAGCAAAGAGAGCTGAGGAAGCAAAAAGAGCTGCTTTGGAAGCTCAGAGAAGAGCAGCTAATGAAGCTGCAGCAAAAAAAGCTTCTGAAGCCTCAAAGAGGCCTGATACTGATGCCAATTTGGGAACTTCTAATGCTCAATCTGGTGGACCTCAAGTAAATAAGCCAGCAGCAGGAGCTAACAAAATCAGGGCAGCTGAAAGTGCTTTAAATTTAGAGCAGAGGAGACTACAAAAGTTAAAACAGTTGGATGAAGAAGTCCAGGCAGTAAGATCAAGTTCCAACGAGAATTTTGGGAACTATGAGAGGCAAATTTCTAAGTTGATCCAACAAATTACAGGAACAACAGAAAATGTCAGACAAAAAGAATATGATCTACTCAAGATCTTTTGCGATGCACGTTGCCCGCAATCTATCAAAACTGCAGCATTGGCAAAGAAGGTCGTCTCCAACTGTAAACGCCCGGGGAATCCTGCATTTGCACAAGCATTCGTCATTGTTCGCATTACTTCAAAGGTTCCACATGCAATGGACCTTATCCTTGCTGAGTTACACAAAGCTTGCATCTATACAGTTCCAAAGCACTACTCACGGTCAGCATTTGGATCAAATGAGGCTTATTATAAAGCTCTTGGATTCCAAGAAGATGATGAAGGAAAGATTGAGAGTGTTGACAGTTATTTGACACGATTAGAATCTTATATGAAGCTATATGGGGCACTTGTTCAGACGGAGATCGATAATGTACATGGCCTGAAAGAAGGTTGGGCATGGCTTGCAAGGTTTGTGAATGCTCTTCCTGCGAACAGATATACTGCCGTTGCACTTGCTGCATTCCTACGTATGGCAGGTTATTCTCTCTTCAGAAAGTATAGAAATCAATTCGTGAAGTTGTTGAACATGGTTGCAGACAACTTCTTGAATGCACTAAAAGAACAAGGAGATTCACAGCTAAGCCCAGTTATTGTAGAAATTGATTCCTACATAAAGGACAGGGAATTCCTTCGTGAGCCTGAGGGAAGGCAATTGAAGAGCAATTTGCAATCAGATCTTTCTGTGCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000822 GO:0003006 GO:0003341 GO:0003351 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006403 GO:0006405 GO:0006406 GO:0006417 GO:0006446 GO:0006449 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006928 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007389 GO:0007399 GO:0007422 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008283 GO:0008289 GO:0009791 GO:0009799 GO:0009855 GO:0009889 GO:0009987 GO:0010001 GO:0010154 GO:0010467 GO:0010468 GO:0010556 GO:0010608 GO:0012505 GO:0014009 GO:0014010 GO:0014037 GO:0015031 GO:0015833 GO:0015931 GO:0016973 GO:0019222 GO:0022008 GO:0022414 GO:0030154 GO:0030182 GO:0031323 GO:0031326 GO:0031369 GO:0031503 GO:0031967 GO:0031975 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034248 GO:0034613 GO:0036094 GO:0042063 GO:0042886 GO:0043167 GO:0043168 GO:0043170 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043244 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044614 GO:0045184 GO:0046907 GO:0048316 GO:0048468 GO:0048608 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051028 GO:0051128 GO:0051168 GO:0051169 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051246 GO:0051641 GO:0051649 GO:0060255 GO:0060287 GO:0061458 GO:0065007 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0080090 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GLE1

Protein Analysis

640

Amino Acids

72.58

Weight (kDa)

7.58

Isoelectric Point (pI)

48.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GLE1 PF07817 367 - 588 1.3e-45 GLE1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1482
AasI GACNNNNNNGTC 1 cut(s) 728
Acc36I ACCTGC 1 cut(s) 1697
AccB1I GGYRCC 1 cut(s) 446
AccI GTMKAC 1 cut(s) 120
AccII CGCG 3 cut(s) 12, 33, 49
AciI CCGC 5 cut(s) 47, 207, 683, 833, 1265
AclWI GGATC 3 cut(s) 171, 1177, 1471
AcsI RAATTY 4 cut(s) 1069, 1147, 1170, 1856
AcuI CTGAAG 4 cut(s) 593, 822, 966, 1705
AcyI GRCGYC 2 cut(s) 336, 447
AfaI GTAC 1 cut(s) 1605
AfiI CCNNNNNNNGG 4 cut(s) 53, 957, 1031, 1702
AflIII ACRYGT 1 cut(s) 31
AgsI TTSAA 6 cut(s) 523, 728, 1371, 1756, 1780, 1888
AjnI CCWGG 1 cut(s) 1119
AjuI GAANNNNNNNTTGG 2 cut(s) 426, 458
Alw26I GTCTC 5 cut(s) 9, 557, 714, 1078, 1309
AlwI GGATC 3 cut(s) 171, 1177, 1471
Ama87I CYCGRG 2 cut(s) 497, 1321
AoxI GGCC 2 cut(s) 959, 1609
ApeKI GCWGC 9 cut(s) 770, 890, 914, 926, 929, 1028, 1052, 1283, 1688
ApoI RAATTY 4 cut(s) 1069, 1147, 1170, 1856
Asp700I GAANNNNTTC 2 cut(s) 810, 1860
AspLEI GCGC 2 cut(s) 51, 449
AspS9I GGNCC 3 cut(s) 153, 1007, 1390
AsuC2I CCSGG 3 cut(s) 81, 1322, 1323
AsuHPI GGTGA 1 cut(s) 440
AvaI CYCGRG 2 cut(s) 497, 1321
AvaII GGWCC 3 cut(s) 153, 1007, 1390
AxyI CCTNAGG 1 cut(s) 1872
BaeGI GKGCMC 1 cut(s) 1579
BanI GGYRCC 1 cut(s) 446
BbvCI CCTCAGC 2 cut(s) 840, 873
BbvI GCAGC 9 cut(s) 782, 877, 913, 926, 941, 1040, 1064, 1295, 1675
BceAI ACGGC 1 cut(s) 1661
BciT130I CCWGG 1 cut(s) 1121
BclI TGATCA 1 cut(s) 358
BcnI CCSGG 3 cut(s) 81, 1322, 1323
BcoDI GTCTC 5 cut(s) 9, 557, 714, 1078, 1309
BfaI CTAG 4 cut(s) 167, 285, 479, 656
BfmI CTRYAG 2 cut(s) 927, 1281
BfoI RGCGCY 1 cut(s) 450
BfuAI ACCTGC 1 cut(s) 1697
BglII AGATCT 4 cut(s) 635, 734, 1242, 1906
BlpI GCTNAGC 1 cut(s) 1811
Bme1390I CCNGG 4 cut(s) 81, 1121, 1322, 1323
Bme18I GGWCC 3 cut(s) 153, 1007, 1390
BmeT110I CYCGRG 2 cut(s) 497, 1321
BmgT120I GGNCC 3 cut(s) 153, 1007, 1390
BmiI GGNNCC 4 cut(s) 219, 448, 545, 1377
BmrFI CCNGG 4 cut(s) 81, 1121, 1322, 1323
BmrI ACTGGG 1 cut(s) 1811
BmsI GCATC 5 cut(s) 757, 772, 961, 1243, 1431
BmuI ACTGGG 1 cut(s) 1811
Bpu10I CCTNAGC 2 cut(s) 840, 873
Bpu1102I GCTNAGC 1 cut(s) 1811
BpuEI CTTGAG 2 cut(s) 996, 1223
BpuMI CCSGG 3 cut(s) 81, 1322, 1323
Bsa29I ATCGAT 1 cut(s) 1596
BsaAI YACGTR 1 cut(s) 1700
BsaBI GATNNNNATC 1 cut(s) 1552
BsaHI GRCGYC 2 cut(s) 336, 447
BsaI GGTCTC 1 cut(s) 714
BsaJI CCNNGG 4 cut(s) 52, 369, 1321, 1322
Bsc4I CCNNNNNNNGG 4 cut(s) 53, 957, 1031, 1702
Bse1I ACTGG 1 cut(s) 1817
Bse21I CCTNAGG 1 cut(s) 1872
Bse3DI GCAATG 1 cut(s) 1392
Bse8I GATNNNNATC 1 cut(s) 1552
BseBI CCWGG 1 cut(s) 1121
BseCI ATCGAT 1 cut(s) 1596
BseDI CCNNGG 4 cut(s) 52, 369, 1321, 1322
BseGI GGATG 2 cut(s) 63, 1114
BseJI GATNNNNATC 1 cut(s) 1552
BseLI CCNNNNNNNGG 4 cut(s) 53, 957, 1031, 1702
BseMI GCAATG 1 cut(s) 1392
BseMII CTCAG 6 cut(s) 421, 831, 864, 917, 1395, 1863
BseNI ACTGG 1 cut(s) 1817
BseRI GAGGAG 2 cut(s) 362, 1096
BseSI GKGCMC 1 cut(s) 1579
BseXI GCAGC 9 cut(s) 782, 877, 913, 926, 941, 1040, 1064, 1295, 1675
BsgI GTGCAG 1 cut(s) 585
Bsh1236I CGCG 3 cut(s) 12, 33, 49
Bsh1285I CGRYCG 1 cut(s) 23
BshFI GGCC 2 cut(s) 961, 1611
BshNI GGYRCC 1 cut(s) 446
BshVI ATCGAT 1 cut(s) 1596
BsiEI CGRYCG 1 cut(s) 23
BsiHKCI CYCGRG 2 cut(s) 497, 1321
BsiSI CCGG 2 cut(s) 80, 1322
BslFI GGGAC 1 cut(s) 93
BslI CCNNNNNNNGG 4 cut(s) 53, 957, 1031, 1702
BsmAI GTCTC 5 cut(s) 9, 557, 714, 1078, 1309
BsmBI CGTCTC 1 cut(s) 1309
BsmFI GGGAC 1 cut(s) 93
BsmI GAATGC 4 cut(s) 1346, 1654, 1691, 1786
BsnI GGCC 2 cut(s) 961, 1611
Bso31I GGTCTC 1 cut(s) 714
BsoBI CYCGRG 2 cut(s) 497, 1321
Bsp1286I GDGCHC 1 cut(s) 1579
Bsp1407I TGTACA 1 cut(s) 1603
Bsp1720I GCTNAGC 1 cut(s) 1811
Bsp19I CCATGG 1 cut(s) 369
BspACI CCGC 5 cut(s) 47, 207, 683, 833, 1265
BspANI GGCC 2 cut(s) 961, 1611
BspCNI CTCAG 6 cut(s) 420, 832, 865, 916, 1396, 1864
BspDI ATCGAT 1 cut(s) 1596
BspFNI CGCG 3 cut(s) 12, 33, 49
BspHI TCATGA 1 cut(s) 355
BspLI GGNNCC 4 cut(s) 219, 448, 545, 1377
BspMAI CTGCAG 2 cut(s) 931, 1285
BspMI ACCTGC 1 cut(s) 1697
BspPI GGATC 3 cut(s) 171, 1177, 1471
BspQI GCTCTTC 3 cut(s) 904, 1659, 1883
BspT107I GGYRCC 1 cut(s) 446
BspTNI GGTCTC 1 cut(s) 714
BsrDI GCAATG 1 cut(s) 1392
BsrGI TGTACA 1 cut(s) 1603
BsrI ACTGG 1 cut(s) 1817
BssECI CCNNGG 4 cut(s) 52, 369, 1321, 1322
BssNAI GTATAC 1 cut(s) 121
BssNI GRCGYC 2 cut(s) 336, 447
BssT1I CCWWGG 1 cut(s) 369
Bst1107I GTATAC 1 cut(s) 121
Bst2UI CCWGG 1 cut(s) 1121
Bst4CI ACNGT 9 cut(s) 125, 384, 416, 709, 1104, 1313, 1432, 1452, 1535
Bst6I CTCTTC 6 cut(s) 260, 569, 904, 1659, 1724, 1883
BstACI GRCGYC 2 cut(s) 336, 447
BstAPI GCANNNNNTGC 2 cut(s) 1634, 1688
BstAUI TGTACA 1 cut(s) 1603
BstBAI YACGTR 1 cut(s) 1700
BstC8I GCNNGC 4 cut(s) 1026, 1265, 1420, 1635
BstDEI CTNAG 9 cut(s) 213, 407, 840, 873, 903, 1176, 1404, 1811, 1872
BstDSI CCRYGG 2 cut(s) 52, 369
BstENI CCTNNNNNAGG 1 cut(s) 955
BstF5I GGATG 2 cut(s) 63, 1114
BstFNI CGCG 3 cut(s) 12, 33, 49
BstH2I RGCGCY 1 cut(s) 450
BstHHI GCGC 2 cut(s) 51, 449
BstMAI GTCTC 5 cut(s) 9, 557, 714, 1078, 1309
BstMCI CGRYCG 1 cut(s) 23
BstNI CCWGG 1 cut(s) 1121
BstNSI RCATGY 1 cut(s) 1385
BstSCI CCNGG 4 cut(s) 79, 1119, 1320, 1321
BstSFI CTRYAG 2 cut(s) 927, 1281
BstSLI GKGCMC 1 cut(s) 1579
BstSNI TACGTA 1 cut(s) 1700
BstUI CGCG 3 cut(s) 12, 33, 49
BstV1I GCAGC 9 cut(s) 782, 877, 913, 926, 941, 1040, 1064, 1295, 1675
BstX2I RGATCY 5 cut(s) 163, 635, 734, 1242, 1906
BstYI RGATCY 5 cut(s) 163, 635, 734, 1242, 1906
BstZ17I GTATAC 1 cut(s) 121
Bsu15I ATCGAT 1 cut(s) 1596
Bsu36I CCTNAGG 1 cut(s) 1872
BsuRI GGCC 2 cut(s) 961, 1611
BsuTUI ATCGAT 1 cut(s) 1596
BtgI CCRYGG 2 cut(s) 52, 369
BtgZI GCGATG 1 cut(s) 1266
BtsCI GGATG 2 cut(s) 63, 1114
BtsIMutI CAGTG 3 cut(s) 130, 415, 421
BveI ACCTGC 1 cut(s) 1697
Cac8I GCNNGC 4 cut(s) 1026, 1265, 1420, 1635
CciI TCATGA 1 cut(s) 355
CfoI GCGC 2 cut(s) 51, 449
Cfr13I GGNCC 3 cut(s) 153, 1007, 1390
Cfr9I CCCGGG 1 cut(s) 1321
ClaI ATCGAT 1 cut(s) 1596
CseI GACGC 1 cut(s) 344
Csp6I GTAC 1 cut(s) 1604
CviAII CATG 7 cut(s) 322, 356, 370, 1382, 1607, 1629, 1759
CviQI GTAC 1 cut(s) 1604
DdeI CTNAG 9 cut(s) 213, 407, 840, 873, 903, 1176, 1404, 1811, 1872
DinI GGCGCC 1 cut(s) 448
DraI TTTAAA 1 cut(s) 1068
DrdI GACNNNNNNGTC 1 cut(s) 728
DseDI GACNNNNNNGTC 1 cut(s) 728
Eam1104I CTCTTC 6 cut(s) 260, 569, 904, 1659, 1724, 1883
EarI CTCTTC 6 cut(s) 260, 569, 904, 1659, 1724, 1883
Eco105I TACGTA 1 cut(s) 1700
Eco130I CCWWGG 1 cut(s) 369
Eco147I AGGCCT 1 cut(s) 961
Eco31I GGTCTC 1 cut(s) 714
Eco47I GGWCC 3 cut(s) 153, 1007, 1390
Eco57I CTGAAG 4 cut(s) 593, 822, 966, 1705
Eco81I CCTNAGG 1 cut(s) 1872
Eco88I CYCGRG 2 cut(s) 497, 1321
EcoNI CCTNNNNNAGG 1 cut(s) 955
EcoRI GAATTC 1 cut(s) 1856
EcoRII CCWGG 1 cut(s) 1119
EcoT14I CCWWGG 1 cut(s) 369
EgeI GGCGCC 1 cut(s) 448
EheI GGCGCC 1 cut(s) 448
ErhI CCWWGG 1 cut(s) 369
Esp3I CGTCTC 1 cut(s) 1309
FaeI CATG 7 cut(s) 325, 359, 373, 1385, 1610, 1632, 1762
FalI AAGNNNNNCTT 4 cut(s) 795, 827, 877, 909
FaqI GGGAC 1 cut(s) 93
FatI CATG 7 cut(s) 321, 355, 369, 1381, 1606, 1628, 1758
FauI CCCGC 1 cut(s) 1272
FbaI TGATCA 1 cut(s) 358
FblI GTMKAC 1 cut(s) 120
FokI GGATG 2 cut(s) 50, 1121
FspBI CTAG 4 cut(s) 167, 285, 479, 656
GlaI GCGC 2 cut(s) 50, 448
HaeII RGCGCY 1 cut(s) 450
HaeIII GGCC 2 cut(s) 961, 1611
HapII CCGG 2 cut(s) 80, 1322
HgaI GACGC 1 cut(s) 344
HhaI GCGC 2 cut(s) 51, 449
Hin1I GRCGYC 2 cut(s) 336, 447
Hin1II CATG 7 cut(s) 325, 359, 373, 1385, 1610, 1632, 1762
Hin6I GCGC 2 cut(s) 49, 447
HinP1I GCGC 2 cut(s) 49, 447
HincII GTYRAC 1 cut(s) 1531
HindII GTYRAC 1 cut(s) 1531
HindIII AAGCTT 3 cut(s) 809, 939, 1416
HinfI GANTC 7 cut(s) 422, 434, 1327, 1494, 1553, 1802, 1835
HpaII CCGG 2 cut(s) 80, 1322
HphI GGTGA 1 cut(s) 440
Hpy166II GTNNAC 5 cut(s) 121, 512, 1007, 1316, 1531
Hpy188III TCNNGA 6 cut(s) 196, 356, 1240, 1744, 1777, 1865
Hpy8I GTNNAC 5 cut(s) 121, 512, 1007, 1316, 1531
Hpy99I CGWCG 1 cut(s) 317
HpyAV CCTTC 7 cut(s) 81, 463, 1291, 1505, 1613, 1871, 1872
HpyCH4III ACNGT 9 cut(s) 125, 384, 416, 709, 1104, 1313, 1432, 1452, 1535
HpyCH4IV ACGT 2 cut(s) 1258, 1699
HpyF3I CTNAG 9 cut(s) 213, 407, 840, 873, 903, 1176, 1404, 1811, 1872
HpySE526I ACGT 2 cut(s) 1258, 1699
Hsp92I GRCGYC 2 cut(s) 336, 447
Hsp92II CATG 7 cut(s) 325, 359, 373, 1385, 1610, 1632, 1762
HspAI GCGC 2 cut(s) 49, 447
KasI GGCGCC 1 cut(s) 446
Ksp22I TGATCA 1 cut(s) 358
LguI GCTCTTC 3 cut(s) 904, 1659, 1883
LmnI GCTCC 2 cut(s) 175, 1034
Lsp1109I GCAGC 9 cut(s) 782, 877, 913, 926, 941, 1040, 1064, 1295, 1675
LweI GCATC 5 cut(s) 757, 772, 961, 1243, 1431
MaeI CTAG 4 cut(s) 167, 285, 479, 656
MaeII ACGT 2 cut(s) 1258, 1699
MaeIII GTNAC 3 cut(s) 410, 428, 1407
MfeI CAATTG 2 cut(s) 259, 1883
MflI RGATCY 5 cut(s) 163, 635, 734, 1242, 1906
MhlI GDGCHC 1 cut(s) 1579
MluI ACGCGT 1 cut(s) 31
Mly113I GGCGCC 1 cut(s) 447
MmeI TCCRAC 5 cut(s) 75, 1086, 1164, 1210, 1332
MroXI GAANNNNTTC 2 cut(s) 810, 1860
MseI TTAA 6 cut(s) 90, 387, 528, 704, 1067, 1097
MspA1I CMGCKG 2 cut(s) 207, 1055
MspI CCGG 2 cut(s) 80, 1322
MspR9I CCNGG 4 cut(s) 81, 1121, 1322, 1323
MunI CAATTG 2 cut(s) 259, 1883
Mva1269I GAATGC 4 cut(s) 1346, 1654, 1691, 1786
MvaI CCWGG 1 cut(s) 1121
MvnI CGCG 3 cut(s) 12, 33, 49
NarI GGCGCC 1 cut(s) 447
NciI CCSGG 3 cut(s) 81, 1322, 1323
NcoI CCATGG 1 cut(s) 369
NlaIII CATG 7 cut(s) 325, 359, 373, 1385, 1610, 1632, 1762
NlaIV GGNNCC 4 cut(s) 219, 448, 545, 1377
NmuCI GTSAC 2 cut(s) 410, 428
NspI RCATGY 1 cut(s) 1385
PaeR7I CTCGAG 1 cut(s) 497
PagI TCATGA 1 cut(s) 355
PceI AGGCCT 1 cut(s) 961
PciSI GCTCTTC 3 cut(s) 904, 1659, 1883
PcsI WCGNNNNNNNCGW 2 cut(s) 16, 820
PctI GAATGC 4 cut(s) 1346, 1654, 1691, 1786
PdmI GAANNNNTTC 2 cut(s) 810, 1860
PfeI GAWTC 7 cut(s) 422, 434, 1327, 1494, 1553, 1802, 1835
PfoI TCCNGGA 1 cut(s) 79
PluTI GGCGCC 1 cut(s) 450
Ppu21I YACGTR 1 cut(s) 1700
PsiI TTATAA 1 cut(s) 1482
Psp6I CCWGG 1 cut(s) 1119
PspGI CCWGG 1 cut(s) 1119
PspN4I GGNNCC 4 cut(s) 219, 448, 545, 1377
PspPI GGNCC 3 cut(s) 153, 1007, 1390
PspXI VCTCGAGB 1 cut(s) 497
PstI CTGCAG 2 cut(s) 931, 1285
PsuI RGATCY 5 cut(s) 163, 635, 734, 1242, 1906
PvuII CAGCTG 1 cut(s) 1055
RsaI GTAC 1 cut(s) 1605
RsaNI GTAC 1 cut(s) 1604
SapI GCTCTTC 3 cut(s) 904, 1659, 1883
SaqAI TTAA 6 cut(s) 90, 387, 528, 704, 1067, 1097
Sau96I GGNCC 3 cut(s) 153, 1007, 1390
ScrFI CCNGG 4 cut(s) 81, 1121, 1322, 1323
SduI GDGCHC 1 cut(s) 1579
SfaNI GCATC 5 cut(s) 757, 772, 961, 1243, 1431
SfcI CTRYAG 2 cut(s) 927, 1281
SfoI GGCGCC 1 cut(s) 448
Sfr274I CTCGAG 1 cut(s) 497
SinI GGWCC 3 cut(s) 153, 1007, 1390
SlaI CTCGAG 1 cut(s) 497
SmaI CCCGGG 1 cut(s) 1323
SmlI CTYRAG 3 cut(s) 497, 1011, 1238
SmoI CTYRAG 3 cut(s) 497, 1011, 1238
SnaBI TACGTA 1 cut(s) 1700
SseBI AGGCCT 1 cut(s) 961
SsiI CCGC 5 cut(s) 47, 207, 683, 833, 1265
SspDI GGCGCC 1 cut(s) 446
SspMI CTAG 4 cut(s) 167, 285, 479, 656
StuI AGGCCT 1 cut(s) 961
StyD4I CCNGG 4 cut(s) 79, 1119, 1320, 1321
StyI CCWWGG 1 cut(s) 369
TaaI ACNGT 9 cut(s) 125, 384, 416, 709, 1104, 1313, 1432, 1452, 1535
TaiI ACGT 2 cut(s) 1261, 1702
TaqI TCGA 6 cut(s) 189, 312, 498, 610, 814, 1596
TaqII GACCGA 1 cut(s) 37
TatI WGTACW 1 cut(s) 1603
TauI GCSGC 1 cut(s) 49
TfiI GAWTC 7 cut(s) 422, 434, 1327, 1494, 1553, 1802, 1835
Tru1I TTAA 6 cut(s) 90, 387, 528, 704, 1067, 1097
Tru9I TTAA 6 cut(s) 90, 387, 528, 704, 1067, 1097
TscAI CASTG 3 cut(s) 130, 415, 421
TseFI GTSAC 2 cut(s) 410, 428
TseI GCWGC 9 cut(s) 770, 890, 914, 926, 929, 1028, 1052, 1283, 1688
Tsp45I GTSAC 2 cut(s) 410, 428
TspDTI ATGAA 7 cut(s) 344, 411, 792, 936, 1125, 1524, 1577
TspGWI ACGGA 2 cut(s) 56, 1604
TspMI CCCGGG 1 cut(s) 1321
TspRI CASTG 3 cut(s) 130, 415, 421
VpaK11BI GGWCC 3 cut(s) 153, 1007, 1390
XagI CCTNNNNNAGG 1 cut(s) 955
XapI RAATTY 4 cut(s) 1069, 1147, 1170, 1856
XceI RCATGY 1 cut(s) 1385
XhoI CTCGAG 1 cut(s) 497
XmaI CCCGGG 1 cut(s) 1321
XmiI GTMKAC 1 cut(s) 120
XmnI GAANNNNTTC 2 cut(s) 810, 1860
XspI CTAG 4 cut(s) 167, 285, 479, 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.