Rorug04G0261100

Nucleoporin GLE1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0009553
Physical Location & Seq
Reverse (-)
43301477 .. 43306955
5479 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0261100.1

Sequence Viewer

Length: 1749 bp
ATGGGCGAAGATCCGACCGTTGGATCTTCGTATAAATGCAAAACGGTGATTAGGGAGGCGATTCGTGAGAATCCGTCCGTCGGATTTTTGTATAAATTTGTGAAGATACGCAGCGGGAATATCGAGTTGTATAATTCATGTTTCGGATTTGGATTTGTTATTCAAAATCCGGGGCGTGACAACATCCCAGATGCTACACACGGTGGTCTCACATCCCTTGAAGCATTGTCTGTGGCAATGTGCTTTAAAATAACTTCCATTCCATTTTCACAAGGCCTCCCATCTCTTGGTATGTTAAGGATAAGCCAATGTCCTGAATTATCAAGCCTACCGGGTGGACTAGAATACTGTACCTCCATTCGGAGTTTGTCAATAACAAAGTGCCCTAAGGTACCATCCATTTCAATCGAAAGTCTGAGTACATCCCTCGAAGAGTTGTGTGTAAGTGATCTAGACTCTCTTCCAATTTCACGAGGAGGCTTCACATCACTCCGTGAATTGTCAATCATATATTGCGAAAGCGTCCAAATTGGGCCAGAATTTAGTGCCTGTCTTCAAACCCTCGTCTCTCTTCAAAAATTGACGATGAGGTTTTGCGAAAATCTAGAGACTATTCCAAGTTCAGACAAGCTCACATCCCTCCGCAGCTTGGAGATTAGAGGGTGTAATAAATTAACATGTCTACCGAATGGGTTAGCAGCATCGTCACAGTCCTGCAGCCTCACCCGTTTGAAGGAATTGACAATTGGTGATTTCTGCGAGGAGCTCGATGAATTCCCAGCTTTTCAGGCTATACCACAGCTTGAATCATTAACCATCTGGGGGTGGCCTAAGCTCAAGTCTCTCCCTGAACAAATTCAACACTTGCCTTCTTTAAGGCATTTGGAAATAACATGGTTTCACGGAGTGGAGGCTATTCCAGAGTGGTTGGGAAACCTTGCATCTCTTGAGGACCTGACTATTGAGTGTTTCCCGAGTCTAAAGTATCTACCTTCTGTGGAAGCAATGCAACGCCTCACCAAATTGAAAGAGATAGACATCTCCCGCTGTCCCCTTCTAGAAGAAAGATGCACGGAGGAGAGCGGCCCAGAGTGGCCAAAGATTCGTCATCTTCCATTCATCCGCTATAGAACTGAATATGTAAGCCAACTCTTTTTATCCTTGCCCTTTGCAGCAAGATTTGGGGCACAAGGATTGTACCTTGCCAGGTGCTCTGTTGTACTTGAGAAGTCATGTAACTATAAGCAGTCATTTGGTGCAACCAAAGCACTCTCAGAGCCAAAAAAAAATTCAGAGTTCATTGACACACACAGAAGGAGGGTCTGCGGAGGGTTACATGGATTTACATTATTAAGCACTTTGCAATCCTTTAACTTCATGAAGTTCCGCACCAAGGCAAGGTTTCCTGTCAGCAAAAGAAGCTTTCAGTTTGTTCCTCCGAATTGTCCTCCAAAGTGGTGGTGTAAGATTATTGGGGTTAACTCTGTTTTACTAAACCCTTTTAAAATCATTACTAGCTTGGAAGGTGCTGAATTGAAAACTCTTAATGGCTTTCACAATACAGGCAATGATGCTCGTGGATACTTCTGCCCGAGCAGAACAACCGATCAGGAGTGGACACGTGGGCAACATGCTCCACGCCAGCTCGGAGAACTTATCAAGGAGCCTCTTTTTTTTAGTCTGATAAAAAGGAGCCTCACATTCAATCATGATGAGACGTCTGCCCATGCCTTGAGCTACTCACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000822 GO:0003006 GO:0003341 GO:0003351 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006403 GO:0006405 GO:0006406 GO:0006417 GO:0006446 GO:0006449 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006928 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007389 GO:0007399 GO:0007422 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008283 GO:0008289 GO:0009791 GO:0009799 GO:0009855 GO:0009889 GO:0009987 GO:0010001 GO:0010154 GO:0010467 GO:0010468 GO:0010556 GO:0010608 GO:0012505 GO:0014009 GO:0014010 GO:0014037 GO:0015031 GO:0015833 GO:0015931 GO:0016973 GO:0019222 GO:0022008 GO:0022414 GO:0030154 GO:0030182 GO:0031323 GO:0031326 GO:0031369 GO:0031503 GO:0031967 GO:0031975 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034248 GO:0034613 GO:0036094 GO:0042063 GO:0042886 GO:0043167 GO:0043168 GO:0043170 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043244 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044614 GO:0045184 GO:0046907 GO:0048316 GO:0048468 GO:0048608 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051028 GO:0051128 GO:0051168 GO:0051169 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051246 GO:0051641 GO:0051649 GO:0060255 GO:0060287 GO:0061458 GO:0065007 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0080090 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GLE1

Protein Analysis

582

Amino Acids

65.28

Weight (kDa)

8.24

Isoelectric Point (pI)

49.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 93 - 274 2.4e-08 Leucine-rich repeat region
LRR_RPS2 PF23247 210 - 350 1.5e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_14 PF23598 268 - 352 1.6e-07 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 284 - 343 3e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1721
Acc65I GGTACC 1 cut(s) 391
AccB1I GGYRCC 1 cut(s) 391
AccB7I CCANNNNNTGG 1 cut(s) 287
AccBSI CCGCTC 1 cut(s) 1083
AccI GTMKAC 1 cut(s) 682
AciI CCGC 7 cut(s) 114, 643, 1045, 1083, 1123, 1326, 1387
AclWI GGATC 2 cut(s) 5, 31
AcoI YGGCCR 1 cut(s) 1094
AcsI RAATTY 5 cut(s) 95, 539, 773, 855, 1288
AcvI CACGTG 1 cut(s) 1622
AcyI GRCGYC 1 cut(s) 1718
AdeI CACNNNGTG 3 cut(s) 203, 494, 907
AfaI GTAC 5 cut(s) 352, 393, 421, 1199, 1221
AfiI CCNNNNNNNGG 9 cut(s) 20, 80, 287, 360, 649, 733, 822, 1393, 1398
AflIII ACRYGT 2 cut(s) 677, 1619
AjnI CCWGG 1 cut(s) 1205
AjuI GAANNNNNNNTTGG 4 cut(s) 729, 761, 1273, 1305
Alw21I GWGCWC 2 cut(s) 768, 1214
Alw26I GTCTC 5 cut(s) 212, 571, 602, 846, 1709
AlwI GGATC 2 cut(s) 5, 31
Ama87I CYCGRG 2 cut(s) 973, 1591
AoxI GGCC 5 cut(s) 274, 533, 827, 1084, 1094
ApeKI GCWGC 5 cut(s) 111, 645, 698, 717, 1172
ApoI RAATTY 5 cut(s) 95, 539, 773, 855, 1288
Asp700I GAANNNNTTC 1 cut(s) 855
Asp718I GGTACC 1 cut(s) 391
AspS9I GGNCC 3 cut(s) 533, 952, 1085
AsuC2I CCSGG 2 cut(s) 171, 333
AsuHPI GGTGA 4 cut(s) 58, 715, 761, 1009
AvaI CYCGRG 2 cut(s) 973, 1591
AvaII GGWCC 1 cut(s) 952
AxyI CCTNAGG 1 cut(s) 387
BaeGI GKGCMC 2 cut(s) 386, 1189
BalI TGGCCA 1 cut(s) 1096
BanI GGYRCC 1 cut(s) 391
BanII GRGCYC 1 cut(s) 768
BauI CACGAG 2 cut(s) 471, 1575
BbrPI CACGTG 1 cut(s) 1622
BbsI GAAGAC 1 cut(s) 545
Bbv12I GWGCWC 2 cut(s) 768, 1214
BbvI GCAGC 5 cut(s) 123, 657, 710, 729, 1184
BccI CCATC 3 cut(s) 289, 403, 824
BciT130I CCWGG 1 cut(s) 1207
BciVI GTATCC 1 cut(s) 1574
BcnI CCSGG 2 cut(s) 171, 333
BcoDI GTCTC 5 cut(s) 212, 571, 602, 846, 1709
BfaI CTAG 5 cut(s) 341, 452, 605, 1058, 1515
BfmI CTRYAG 2 cut(s) 715, 1126
BfuI GTATCC 1 cut(s) 1574
BisI GCNGC 6 cut(s) 112, 646, 699, 718, 1084, 1173
BlsI GCNGC 6 cut(s) 113, 647, 700, 719, 1085, 1174
Bme1390I CCNGG 3 cut(s) 171, 333, 1207
Bme18I GGWCC 1 cut(s) 952
BmeT110I CYCGRG 2 cut(s) 973, 1591
BmgT120I GGNCC 3 cut(s) 533, 952, 1085
BmiI GGNNCC 3 cut(s) 393, 1665, 1694
BmrFI CCNGG 3 cut(s) 171, 333, 1207
BmsI GCATC 5 cut(s) 181, 710, 950, 1058, 1561
BpiI GAAGAC 1 cut(s) 545
Bpu10I CCTNAGC 1 cut(s) 831
BpuEI CTTGAG 3 cut(s) 821, 968, 1244
BpuMI CCSGG 2 cut(s) 171, 333
BsaAI YACGTR 1 cut(s) 1622
BsaBI GATNNNNATC 1 cut(s) 1037
BsaHI GRCGYC 1 cut(s) 1718
BsaI GGTCTC 1 cut(s) 212
BsaJI CCNNGG 2 cut(s) 170, 1392
BsaXI ACNNNNNCTCC 4 cut(s) 261, 291, 338, 368
Bsc4I CCNNNNNNNGG 9 cut(s) 20, 80, 287, 360, 649, 733, 822, 1393, 1398
Bse21I CCTNAGG 1 cut(s) 387
Bse3DI GCAATG 3 cut(s) 243, 1011, 1573
Bse8I GATNNNNATC 1 cut(s) 1037
BseBI CCWGG 1 cut(s) 1207
BseDI CCNNGG 2 cut(s) 170, 1392
BseGI GGATG 6 cut(s) 183, 212, 395, 422, 635, 1119
BseJI GATNNNNATC 1 cut(s) 1037
BseLI CCNNNNNNNGG 9 cut(s) 20, 80, 287, 360, 649, 733, 822, 1393, 1398
BseMI GCAATG 3 cut(s) 243, 1011, 1573
BseMII CTCAG 2 cut(s) 407, 1287
BseRI GAGGAG 3 cut(s) 489, 776, 1091
BseSI GKGCMC 2 cut(s) 386, 1189
BseXI GCAGC 5 cut(s) 123, 657, 710, 729, 1184
BseYI CCCAGC 1 cut(s) 778
Bsh1285I CGRYCG 1 cut(s) 18
BshFI GGCC 5 cut(s) 276, 535, 829, 1086, 1096
BshNI GGYRCC 1 cut(s) 391
BsiEI CGRYCG 1 cut(s) 18
BsiHKAI GWGCWC 2 cut(s) 768, 1214
BsiHKCI CYCGRG 2 cut(s) 973, 1591
BsiSI CCGG 2 cut(s) 170, 332
BslFI GGGAC 1 cut(s) 1035
BslI CCNNNNNNNGG 9 cut(s) 20, 80, 287, 360, 649, 733, 822, 1393, 1398
BsmAI GTCTC 5 cut(s) 212, 571, 602, 846, 1709
BsmBI CGTCTC 2 cut(s) 571, 1709
BsmFI GGGAC 1 cut(s) 1035
BsnI GGCC 5 cut(s) 276, 535, 829, 1086, 1096
Bso31I GGTCTC 1 cut(s) 212
BsoBI CYCGRG 2 cut(s) 973, 1591
Bsp1286I GDGCHC 4 cut(s) 386, 768, 1189, 1214
Bsp143I GATC 4 cut(s) 10, 23, 448, 1606
BspACI CCGC 7 cut(s) 114, 643, 1045, 1083, 1123, 1326, 1387
BspANI GGCC 5 cut(s) 276, 535, 829, 1086, 1096
BspCNI CTCAG 2 cut(s) 408, 1286
BspHI TCATGA 2 cut(s) 1377, 1708
BspLI GGNNCC 3 cut(s) 393, 1665, 1694
BspMAI CTGCAG 1 cut(s) 719
BspPI GGATC 2 cut(s) 5, 31
BspT107I GGYRCC 1 cut(s) 391
BspTNI GGTCTC 1 cut(s) 212
BsrBI CCGCTC 1 cut(s) 1083
BsrDI GCAATG 3 cut(s) 243, 1011, 1573
BssECI CCNNGG 2 cut(s) 170, 1392
BssMI GATC 4 cut(s) 10, 23, 448, 1606
BssNI GRCGYC 1 cut(s) 1718
BssSI CACGAG 2 cut(s) 471, 1575
BssT1I CCWWGG 1 cut(s) 1392
Bst2BI CACGAG 2 cut(s) 471, 1575
Bst2UI CCWGG 1 cut(s) 1207
Bst4CI ACNGT 5 cut(s) 19, 46, 203, 350, 711
Bst6I CTCTTC 3 cut(s) 426, 465, 576
BstACI GRCGYC 1 cut(s) 1718
BstBAI YACGTR 1 cut(s) 1622
BstC8I GCNNGC 1 cut(s) 1643
BstDEI CTNAG 4 cut(s) 387, 416, 831, 1273
BstF5I GGATG 6 cut(s) 183, 212, 395, 422, 635, 1119
BstKTI GATC 4 cut(s) 13, 26, 451, 1609
BstMAI GTCTC 5 cut(s) 212, 571, 602, 846, 1709
BstMBI GATC 4 cut(s) 10, 23, 448, 1606
BstMCI CGRYCG 1 cut(s) 18
BstMWI GCNNNNNNNGC 3 cut(s) 788, 1265, 1419
BstNI CCWGG 1 cut(s) 1207
BstNSI RCATGY 2 cut(s) 681, 1634
BstSCI CCNGG 3 cut(s) 169, 331, 1205
BstSFI CTRYAG 2 cut(s) 715, 1126
BstSLI GKGCMC 2 cut(s) 386, 1189
BstV1I GCAGC 5 cut(s) 123, 657, 710, 729, 1184
BstV2I GAAGAC 1 cut(s) 545
BstX2I RGATCY 2 cut(s) 10, 23
BstXI CCANNNNNNTGG 1 cut(s) 1458
BstYI RGATCY 2 cut(s) 10, 23
Bsu36I CCTNAGG 1 cut(s) 387
BsuI GTATCC 1 cut(s) 1574
BsuRI GGCC 5 cut(s) 276, 535, 829, 1086, 1096
BtsCI GGATG 6 cut(s) 183, 212, 395, 422, 635, 1119
Cac8I GCNNGC 1 cut(s) 1643
CciI TCATGA 2 cut(s) 1377, 1708
Cfr13I GGNCC 3 cut(s) 533, 952, 1085
CseI GACGC 1 cut(s) 511
Csp6I GTAC 5 cut(s) 351, 392, 420, 1198, 1220
CviAII CATG 9 cut(s) 138, 678, 894, 1233, 1337, 1378, 1631, 1709, 1727
CviQI GTAC 5 cut(s) 351, 392, 420, 1198, 1220
DdeI CTNAG 4 cut(s) 387, 416, 831, 1273
DpnI GATC 4 cut(s) 12, 25, 450, 1608
DpnII GATC 4 cut(s) 10, 23, 448, 1606
DraI TTTAAA 2 cut(s) 247, 1504
DraIII CACNNNGTG 3 cut(s) 203, 494, 907
EaeI YGGCCR 1 cut(s) 1094
Eam1104I CTCTTC 3 cut(s) 426, 465, 576
EarI CTCTTC 3 cut(s) 426, 465, 576
Ecl136II GAGCTC 1 cut(s) 766
Eco130I CCWWGG 1 cut(s) 1392
Eco147I AGGCCT 1 cut(s) 276
Eco24I GRGCYC 1 cut(s) 768
Eco31I GGTCTC 1 cut(s) 212
Eco47I GGWCC 1 cut(s) 952
Eco53kI GAGCTC 1 cut(s) 766
Eco72I CACGTG 1 cut(s) 1622
Eco81I CCTNAGG 1 cut(s) 387
Eco88I CYCGRG 2 cut(s) 973, 1591
EcoICRI GAGCTC 1 cut(s) 766
EcoO109I RGGNCCY 1 cut(s) 952
EcoRI GAATTC 1 cut(s) 773
EcoRII CCWGG 1 cut(s) 1205
EcoT14I CCWWGG 1 cut(s) 1392
EcoT38I GRGCYC 1 cut(s) 768
ErhI CCWWGG 1 cut(s) 1392
Esp3I CGTCTC 2 cut(s) 571, 1709
FaeI CATG 9 cut(s) 141, 681, 897, 1236, 1340, 1381, 1634, 1712, 1730
FaqI GGGAC 1 cut(s) 1035
FatI CATG 9 cut(s) 137, 677, 893, 1232, 1336, 1377, 1630, 1708, 1726
FauI CCCGC 2 cut(s) 107, 1052
FblI GTMKAC 1 cut(s) 682
Fnu4HI GCNGC 6 cut(s) 112, 646, 699, 718, 1084, 1173
FokI GGATG 6 cut(s) 170, 199, 382, 409, 622, 1106
FriOI GRGCYC 1 cut(s) 768
Fsp4HI GCNGC 6 cut(s) 112, 646, 699, 718, 1084, 1173
FspBI CTAG 5 cut(s) 341, 452, 605, 1058, 1515
GluI GCNGC 6 cut(s) 112, 646, 699, 718, 1084, 1173
GsaI CCCAGC 1 cut(s) 782
HaeIII GGCC 5 cut(s) 276, 535, 829, 1086, 1096
HapII CCGG 2 cut(s) 170, 332
HgaI GACGC 1 cut(s) 511
Hin1I GRCGYC 1 cut(s) 1718
Hin1II CATG 9 cut(s) 141, 681, 897, 1236, 1340, 1381, 1634, 1712, 1730
HincII GTYRAC 1 cut(s) 1480
HindII GTYRAC 1 cut(s) 1480
HindIII AAGCTT 1 cut(s) 1420
HinfI GANTC 6 cut(s) 61, 70, 455, 806, 976, 1102
HpaI GTTAAC 1 cut(s) 1480
HpaII CCGG 2 cut(s) 170, 332
HphI GGTGA 4 cut(s) 58, 715, 761, 1009
Hpy166II GTNNAC 4 cut(s) 338, 683, 1480, 1617
Hpy8I GTNNAC 4 cut(s) 338, 683, 1480, 1617
Hpy99I CGWCG 1 cut(s) 83
HpyAV CCTTC 6 cut(s) 727, 879, 1002, 1064, 1308, 1517
HpyCH4III ACNGT 5 cut(s) 19, 46, 203, 350, 711
HpyCH4IV ACGT 2 cut(s) 1621, 1718
HpyCH4V TGCA 8 cut(s) 39, 717, 941, 1009, 1071, 1172, 1259, 1363
HpyF10VI GCNNNNNNNGC 3 cut(s) 788, 1265, 1419
HpyF3I CTNAG 4 cut(s) 387, 416, 831, 1273
HpySE526I ACGT 2 cut(s) 1621, 1718
Hsp92I GRCGYC 1 cut(s) 1718
Hsp92II CATG 9 cut(s) 141, 681, 897, 1236, 1340, 1381, 1634, 1712, 1730
KpnI GGTACC 1 cut(s) 395
KspAI GTTAAC 1 cut(s) 1480
Kzo9I GATC 4 cut(s) 10, 23, 448, 1606
LmnI GCTCC 4 cut(s) 763, 1639, 1663, 1692
Lsp1109I GCAGC 5 cut(s) 123, 657, 710, 729, 1184
LweI GCATC 5 cut(s) 181, 710, 950, 1058, 1561
MaeI CTAG 5 cut(s) 341, 452, 605, 1058, 1515
MaeII ACGT 2 cut(s) 1621, 1718
MaeIII GTNAC 4 cut(s) 176, 705, 1235, 1332
MalI GATC 4 cut(s) 12, 25, 450, 1608
MbiI CCGCTC 1 cut(s) 1083
MboI GATC 4 cut(s) 10, 23, 448, 1606
MboII GAAGA 9 cut(s) 18, 20, 115, 443, 452, 545, 563, 1073, 1103
MfeI CAATTG 1 cut(s) 744
MflI RGATCY 2 cut(s) 10, 23
MhlI GDGCHC 4 cut(s) 386, 768, 1189, 1214
MlsI TGGCCA 1 cut(s) 1096
MluNI TGGCCA 1 cut(s) 1096
MlyI GAGTC 2 cut(s) 449, 985
MmeI TCCRAC 2 cut(s) 38, 61
Mox20I TGGCCA 1 cut(s) 1096
MroXI GAANNNNTTC 1 cut(s) 855
MscI TGGCCA 1 cut(s) 1096
Msp20I TGGCCA 1 cut(s) 1096
MspA1I CMGCKG 2 cut(s) 114, 1047
MspI CCGG 2 cut(s) 170, 332
MspR9I CCNGG 3 cut(s) 171, 333, 1207
MunI CAATTG 1 cut(s) 744
MvaI CCWGG 1 cut(s) 1207
MwoI GCNNNNNNNGC 3 cut(s) 788, 1265, 1419
NciI CCSGG 2 cut(s) 171, 333
NdeII GATC 4 cut(s) 10, 23, 448, 1606
NlaIII CATG 9 cut(s) 141, 681, 897, 1236, 1340, 1381, 1634, 1712, 1730
NlaIV GGNNCC 3 cut(s) 393, 1665, 1694
NmuCI GTSAC 2 cut(s) 176, 705
NspI RCATGY 2 cut(s) 681, 1634
PagI TCATGA 2 cut(s) 1377, 1708
PceI AGGCCT 1 cut(s) 276
PciI ACATGT 1 cut(s) 677
PdmI GAANNNNTTC 1 cut(s) 855
PfeI GAWTC 4 cut(s) 61, 70, 806, 1102
PflMI CCANNNNNTGG 1 cut(s) 287
PkrI GCNGC 6 cut(s) 113, 647, 700, 719, 1085, 1174
PleI GAGTC 2 cut(s) 449, 984
PmaCI CACGTG 1 cut(s) 1622
PmlI CACGTG 1 cut(s) 1622
PpsI GAGTC 2 cut(s) 449, 984
Ppu21I YACGTR 1 cut(s) 1622
PpuMI RGGWCCY 1 cut(s) 952
PscI ACATGT 1 cut(s) 677
Psp124BI GAGCTC 1 cut(s) 768
Psp5II RGGWCCY 1 cut(s) 952
Psp6I CCWGG 1 cut(s) 1205
PspCI CACGTG 1 cut(s) 1622
PspFI CCCAGC 1 cut(s) 778
PspGI CCWGG 1 cut(s) 1205
PspN4I GGNNCC 3 cut(s) 393, 1665, 1694
PspPI GGNCC 3 cut(s) 533, 952, 1085
PspPPI RGGWCCY 1 cut(s) 952
PstI CTGCAG 1 cut(s) 719
PsuI RGATCY 2 cut(s) 10, 23
RsaI GTAC 5 cut(s) 352, 393, 421, 1199, 1221
RsaNI GTAC 5 cut(s) 351, 392, 420, 1198, 1220
SacI GAGCTC 1 cut(s) 768
SatI GCNGC 6 cut(s) 112, 646, 699, 718, 1084, 1173
Sau3AI GATC 4 cut(s) 10, 23, 448, 1606
Sau96I GGNCC 3 cut(s) 533, 952, 1085
SchI GAGTC 2 cut(s) 449, 985
ScrFI CCNGG 3 cut(s) 171, 333, 1207
SduI GDGCHC 4 cut(s) 386, 768, 1189, 1214
SfaNI GCATC 5 cut(s) 181, 710, 950, 1058, 1561
SfcI CTRYAG 2 cut(s) 715, 1126
SinI GGWCC 1 cut(s) 952
SmlI CTYRAG 4 cut(s) 836, 947, 1223, 1732
SmoI CTYRAG 4 cut(s) 836, 947, 1223, 1732
SseBI AGGCCT 1 cut(s) 276
SsiI CCGC 7 cut(s) 114, 643, 1045, 1083, 1123, 1326, 1387
SspMI CTAG 5 cut(s) 341, 452, 605, 1058, 1515
SstI GAGCTC 1 cut(s) 768
StuI AGGCCT 1 cut(s) 276
StyD4I CCNGG 3 cut(s) 169, 331, 1205
StyI CCWWGG 1 cut(s) 1392
TaaI ACNGT 5 cut(s) 19, 46, 203, 350, 711
TaiI ACGT 2 cut(s) 1624, 1721
TaqI TCGA 4 cut(s) 123, 408, 429, 768
TatI WGTACW 2 cut(s) 419, 1219
TauI GCSGC 1 cut(s) 1086
TfiI GAWTC 4 cut(s) 61, 70, 806, 1102
TseFI GTSAC 2 cut(s) 176, 705
TseI GCWGC 5 cut(s) 111, 645, 698, 717, 1172
Tsp45I GTSAC 2 cut(s) 176, 705
TspDTI ATGAA 6 cut(s) 126, 786, 1108, 1288, 1366, 1394
TspGWI ACGGA 5 cut(s) 63, 67, 482, 918, 1088
Van91I CCANNNNNTGG 1 cut(s) 287
VpaK11BI GGWCC 1 cut(s) 952
XapI RAATTY 5 cut(s) 95, 539, 773, 855, 1288
XbaI TCTAGA 3 cut(s) 451, 604, 1057
XceI RCATGY 2 cut(s) 681, 1634
XmiI GTMKAC 1 cut(s) 682
XmnI GAANNNNTTC 1 cut(s) 855
XspI CTAG 5 cut(s) 341, 452, 605, 1058, 1515
ZraI GACGTC 1 cut(s) 1719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.