Rw4G027470

Nucleoporin GLE1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0009553
Physical Location & Seq
Forward (+)
53956809 .. 53964175
7367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G027470.1

Sequence Viewer

Length: 1851 bp
ATGACAATGGGAGGTGTTAAGTTGGAACTTCGTTGCCCCCAAAAAGTATACAGTGTTGCAATAGACCCTAACCCTGATTGGACCTTTGAGGATCTAGTTTCGGAGCTAAATGCCCTCGAAATCAAGATCAACAGCGGTTCTAAGGTTCCACTCCCTTTTGCCAAAGATAAATCAAGGGATATATCCAATTGGAAGAGTAATGGGAGAAACTCTAGCAGCCCGTTTGTTATGCGTGTGTTTGACGATGACATGGACAACATTGACGCCGAAGATGAGGAGGTTCATGATCGGAAATCCATGGTTGCTAAACGGTTTAATTTTGATGAACTCTATCTCAGTGACAGTGATGATTCTGGTGACGAATCATCTTTTGGCGCCGAACCTTACCTAAGGGAGAAGGTTGATCTAGTGGAAAGTGGTTTGCTCGAGCTATCCCGTGAACATCAGTTCAAAGTTAAGGAGGAAATTAGGAACCAAATATCAGCATTAGAGACAGATCTGAAGAGTGAAACTGACAAGTCTATTTCTGCACTTGTTCGAGTTGAGAAATATAGAAAAGAAAGATCTGAAATGGATAGAAAACTAGACACTCAATATCAACGCAAGATAGCGGAAGCACTTGATAATCACTTAACTGTTGTCCAGCGAGACCTTGAAGTCAGATCTCAAATAGAAGAAAGAAAAATAAGAATTGATGCAGCTTATGAAGATGCTAAACGAAGGGAAGCTGAAGAAAAGCTTCGACAAGAGCGAGCTAAAGCGGAAGCTGAGGCAAAAAGAGTTGAGGAAGCAAAGAAAGCTGAGGAAGCAAAAAGAGCTTCTTTGGAAGCTCAGAGAAGAGCAGCTAATGAAGCTGCAGCAAAAAAAGCTTCTGAAGCCTCAAAGAGGCCTGATACTGATGCCAATTTGGGAACTTCTAATGCTCAATCCGGTGGACCTCAAGTAAATAAGCCAGCAGCAGGAGCTAACAAAATCAGGGCAGCTGAAAGTGCTTTAAATTTAGAGCAGAGGAGACTACAAAAGTTAAAACAGTTGGATGAAGAAGTCCAGGCACTAAGATCAAGTTCCAACGAGAATTTTGGGAAGTACGAGAGGCAAATTGCTAAGTTGATCCAACAAATTACAGGAACAACAGAAAATGTCAGACAAAAAGAATATGATCTACTCAAGATCTTTTGCGATGCACGTTGCCCGCAATCTATCAAAACTGCAGCATTGGCAAAGAAGGTCGTCTCCAACTGTAAACGCCCGGGGAATCCTGCATTTGCACAAGCATTCGTCATTGTTCGCATTACTTCAAAGGTTCCACATGCAATGGACCTTATCCTTGCTGAGTTACACAAAGCTTGCATCTATACAGTTCCAAAGCACTACTCACGGTCAGCATTTGGATCAAATGAGGCTTATTATAAAGCTCTTGGATTCCAAGAAGATGATGAAGGAAAGATTGAGAGCGTTGACAGTTATTTGACACGATTAGAATCTTATATGAAGCTATATGGGGCACTTGTTCAGACGGAGATCGATAATGTACATGGCCTGAAAGAAGGTTGGGCATGGCTTGCAAGGTTTGTGAATGCTCTTCCTGCGAACAGATATACTGCTGTTGCACTTGCAGCATTCCTACGTATGGCGGGTTATTCTCTCTTCAGAAAGTATAGAAATCAATTCGTGAAGTTGTTGAACATGGTTGCAGACAACTTCTTGAATGCACTAAAAGAACAAGGAGATTCACAGTTAAGCCCGGTTATTGTAGAAATTGACTCCTACATAAAGGACAGGGAATTCCTTCGTGAGCCTGAGGGAAGGCAATTGAAGAGCAATTTGCAATCAGATCTTTCTGTGCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000822 GO:0003006 GO:0003341 GO:0003351 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006403 GO:0006405 GO:0006406 GO:0006417 GO:0006446 GO:0006449 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006928 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007389 GO:0007399 GO:0007422 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008283 GO:0008289 GO:0009791 GO:0009799 GO:0009855 GO:0009889 GO:0009987 GO:0010001 GO:0010154 GO:0010467 GO:0010468 GO:0010556 GO:0010608 GO:0012505 GO:0014009 GO:0014010 GO:0014037 GO:0015031 GO:0015833 GO:0015931 GO:0016973 GO:0019222 GO:0022008 GO:0022414 GO:0030154 GO:0030182 GO:0031323 GO:0031326 GO:0031369 GO:0031503 GO:0031967 GO:0031975 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034248 GO:0034613 GO:0036094 GO:0042063 GO:0042886 GO:0043167 GO:0043168 GO:0043170 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043244 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044614 GO:0045184 GO:0046907 GO:0048316 GO:0048468 GO:0048608 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051028 GO:0051128 GO:0051168 GO:0051169 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051246 GO:0051641 GO:0051649 GO:0060255 GO:0060287 GO:0061458 GO:0065007 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0080090 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GLE1

Protein Analysis

616

Amino Acids

69.87

Weight (kDa)

6.5

Isoelectric Point (pI)

45.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GLE1 PF07817 343 - 564 2.9e-45 GLE1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1410
AasI GACNNNNNNGTC 1 cut(s) 656
AccB1I GGYRCC 1 cut(s) 374
AccI GTMKAC 1 cut(s) 48
AciI CCGC 5 cut(s) 135, 611, 761, 1193, 1634
AclWI GGATC 3 cut(s) 99, 1105, 1399
AcsI RAATTY 3 cut(s) 997, 1075, 1784
AcuI CTGAAG 4 cut(s) 521, 750, 894, 1633
AcyI GRCGYC 2 cut(s) 264, 375
AfaI GTAC 2 cut(s) 1088, 1533
AfiI CCNNNNNNNGG 3 cut(s) 885, 959, 1630
AgsI TTSAA 6 cut(s) 451, 656, 1299, 1684, 1708, 1816
AjnI CCWGG 1 cut(s) 1047
AjuI GAANNNNNNNTTGG 2 cut(s) 354, 386
Alw26I GTCTC 4 cut(s) 485, 642, 1006, 1237
AlwI GGATC 3 cut(s) 99, 1105, 1399
Ama87I CYCGRG 2 cut(s) 425, 1249
AoxI GGCC 2 cut(s) 887, 1537
ApeKI GCWGC 9 cut(s) 216, 698, 842, 854, 857, 956, 980, 1211, 1616
ApoI RAATTY 3 cut(s) 997, 1075, 1784
Asp700I GAANNNNTTC 2 cut(s) 738, 1788
AspLEI GCGC 1 cut(s) 377
AspS9I GGNCC 3 cut(s) 81, 935, 1318
AsuC2I CCSGG 3 cut(s) 1250, 1251, 1745
AsuHPI GGTGA 1 cut(s) 368
AvaI CYCGRG 2 cut(s) 425, 1249
AvaII GGWCC 3 cut(s) 81, 935, 1318
AxyI CCTNAGG 2 cut(s) 389, 1800
BaeGI GKGCMC 1 cut(s) 1507
BanI GGYRCC 1 cut(s) 374
BbvCI CCTCAGC 2 cut(s) 768, 801
BbvI GCAGC 9 cut(s) 228, 710, 841, 854, 869, 968, 992, 1223, 1628
BceAI ACGGC 1 cut(s) 1831
BciT130I CCWGG 1 cut(s) 1049
BcnI CCSGG 3 cut(s) 1250, 1251, 1745
BcoDI GTCTC 4 cut(s) 485, 642, 1006, 1237
BfaI CTAG 4 cut(s) 95, 213, 407, 584
BfmI CTRYAG 2 cut(s) 855, 1209
BfoI RGCGCY 1 cut(s) 378
BglII AGATCT 5 cut(s) 496, 563, 662, 1170, 1834
BisI GCNGC 9 cut(s) 217, 699, 843, 855, 858, 957, 981, 1212, 1617
BlsI GCNGC 9 cut(s) 218, 700, 844, 856, 859, 958, 982, 1213, 1618
Bme1390I CCNGG 4 cut(s) 1049, 1250, 1251, 1745
Bme18I GGWCC 3 cut(s) 81, 935, 1318
BmeT110I CYCGRG 2 cut(s) 425, 1249
BmgT120I GGNCC 3 cut(s) 81, 935, 1318
BmiI GGNNCC 4 cut(s) 147, 376, 473, 1305
BmrFI CCNGG 4 cut(s) 1049, 1250, 1251, 1745
BmsI GCATC 5 cut(s) 685, 700, 889, 1171, 1359
Bpu10I CCTNAGC 2 cut(s) 768, 801
BpuEI CTTGAG 2 cut(s) 924, 1151
BpuMI CCSGG 3 cut(s) 1250, 1251, 1745
Bsa29I ATCGAT 1 cut(s) 1524
BsaAI YACGTR 1 cut(s) 1628
BsaBI GATNNNNATC 1 cut(s) 1480
BsaHI GRCGYC 2 cut(s) 264, 375
BsaI GGTCTC 1 cut(s) 642
BsaJI CCNNGG 3 cut(s) 297, 1249, 1250
BsaWI WCCGGW 1 cut(s) 929
Bsc4I CCNNNNNNNGG 3 cut(s) 885, 959, 1630
Bse21I CCTNAGG 2 cut(s) 389, 1800
Bse3DI GCAATG 1 cut(s) 1320
Bse8I GATNNNNATC 1 cut(s) 1480
BseBI CCWGG 1 cut(s) 1049
BseCI ATCGAT 1 cut(s) 1524
BseDI CCNNGG 3 cut(s) 297, 1249, 1250
BseGI GGATG 1 cut(s) 1042
BseJI GATNNNNATC 1 cut(s) 1480
BseLI CCNNNNNNNGG 3 cut(s) 885, 959, 1630
BseMI GCAATG 1 cut(s) 1320
BseMII CTCAG 6 cut(s) 349, 759, 792, 845, 1323, 1791
BseRI GAGGAG 2 cut(s) 290, 1024
BseSI GKGCMC 1 cut(s) 1507
BseXI GCAGC 9 cut(s) 228, 710, 841, 854, 869, 968, 992, 1223, 1628
BsgI GTGCAG 1 cut(s) 513
BshFI GGCC 2 cut(s) 889, 1539
BshNI GGYRCC 1 cut(s) 374
BshVI ATCGAT 1 cut(s) 1524
BsiHKCI CYCGRG 2 cut(s) 425, 1249
BsiSI CCGG 3 cut(s) 930, 1250, 1745
BslI CCNNNNNNNGG 3 cut(s) 885, 959, 1630
BsmAI GTCTC 4 cut(s) 485, 642, 1006, 1237
BsmBI CGTCTC 1 cut(s) 1237
BsmI GAATGC 4 cut(s) 1274, 1582, 1619, 1714
BsnI GGCC 2 cut(s) 889, 1539
Bso31I GGTCTC 1 cut(s) 642
BsoBI CYCGRG 2 cut(s) 425, 1249
Bsp1286I GDGCHC 1 cut(s) 1507
Bsp1407I TGTACA 1 cut(s) 1531
Bsp19I CCATGG 1 cut(s) 297
BspACI CCGC 5 cut(s) 135, 611, 761, 1193, 1634
BspANI GGCC 2 cut(s) 889, 1539
BspCNI CTCAG 6 cut(s) 348, 760, 793, 844, 1324, 1792
BspDI ATCGAT 1 cut(s) 1524
BspHI TCATGA 1 cut(s) 283
BspLI GGNNCC 4 cut(s) 147, 376, 473, 1305
BspMAI CTGCAG 2 cut(s) 859, 1213
BspPI GGATC 3 cut(s) 99, 1105, 1399
BspQI GCTCTTC 3 cut(s) 832, 1587, 1811
BspT107I GGYRCC 1 cut(s) 374
BspTNI GGTCTC 1 cut(s) 642
BsrDI GCAATG 1 cut(s) 1320
BsrGI TGTACA 1 cut(s) 1531
BssECI CCNNGG 3 cut(s) 297, 1249, 1250
BssNAI GTATAC 1 cut(s) 49
BssNI GRCGYC 2 cut(s) 264, 375
BssT1I CCWWGG 1 cut(s) 297
Bst1107I GTATAC 1 cut(s) 49
Bst2UI CCWGG 1 cut(s) 1049
Bst6I CTCTTC 6 cut(s) 188, 497, 832, 1587, 1652, 1811
BstACI GRCGYC 2 cut(s) 264, 375
BstAPI GCANNNNNTGC 1 cut(s) 1562
BstAUI TGTACA 1 cut(s) 1531
BstBAI YACGTR 1 cut(s) 1628
BstC8I GCNNGC 5 cut(s) 753, 954, 1193, 1348, 1563
BstDSI CCRYGG 1 cut(s) 297
BstENI CCTNNNNNAGG 1 cut(s) 883
BstF5I GGATG 1 cut(s) 1042
BstH2I RGCGCY 1 cut(s) 378
BstHHI GCGC 1 cut(s) 377
BstMAI GTCTC 4 cut(s) 485, 642, 1006, 1237
BstNI CCWGG 1 cut(s) 1049
BstNSI RCATGY 1 cut(s) 1313
BstSCI CCNGG 4 cut(s) 1047, 1248, 1249, 1743
BstSFI CTRYAG 2 cut(s) 855, 1209
BstSLI GKGCMC 1 cut(s) 1507
BstSNI TACGTA 1 cut(s) 1628
BstV1I GCAGC 9 cut(s) 228, 710, 841, 854, 869, 968, 992, 1223, 1628
BstX2I RGATCY 6 cut(s) 91, 496, 563, 662, 1170, 1834
BstYI RGATCY 6 cut(s) 91, 496, 563, 662, 1170, 1834
BstZ17I GTATAC 1 cut(s) 49
Bsu15I ATCGAT 1 cut(s) 1524
Bsu36I CCTNAGG 2 cut(s) 389, 1800
BsuRI GGCC 2 cut(s) 889, 1539
BsuTUI ATCGAT 1 cut(s) 1524
BtgI CCRYGG 1 cut(s) 297
BtgZI GCGATG 1 cut(s) 1194
BtsCI GGATG 1 cut(s) 1042
BtsIMutI CAGTG 3 cut(s) 58, 343, 349
Cac8I GCNNGC 5 cut(s) 753, 954, 1193, 1348, 1563
CciI TCATGA 1 cut(s) 283
CfoI GCGC 1 cut(s) 377
Cfr13I GGNCC 3 cut(s) 81, 935, 1318
Cfr9I CCCGGG 1 cut(s) 1249
ClaI ATCGAT 1 cut(s) 1524
CseI GACGC 1 cut(s) 272
Csp6I GTAC 2 cut(s) 1087, 1532
CviAII CATG 7 cut(s) 250, 284, 298, 1310, 1535, 1557, 1687
CviQI GTAC 2 cut(s) 1087, 1532
DinI GGCGCC 1 cut(s) 376
DraI TTTAAA 1 cut(s) 996
DrdI GACNNNNNNGTC 1 cut(s) 656
DseDI GACNNNNNNGTC 1 cut(s) 656
Eam1104I CTCTTC 6 cut(s) 188, 497, 832, 1587, 1652, 1811
EarI CTCTTC 6 cut(s) 188, 497, 832, 1587, 1652, 1811
Eco105I TACGTA 1 cut(s) 1628
Eco130I CCWWGG 1 cut(s) 297
Eco147I AGGCCT 1 cut(s) 889
Eco31I GGTCTC 1 cut(s) 642
Eco47I GGWCC 3 cut(s) 81, 935, 1318
Eco57I CTGAAG 4 cut(s) 521, 750, 894, 1633
Eco81I CCTNAGG 2 cut(s) 389, 1800
Eco88I CYCGRG 2 cut(s) 425, 1249
EcoNI CCTNNNNNAGG 1 cut(s) 883
EcoRI GAATTC 1 cut(s) 1784
EcoRII CCWGG 1 cut(s) 1047
EcoT14I CCWWGG 1 cut(s) 297
EgeI GGCGCC 1 cut(s) 376
EheI GGCGCC 1 cut(s) 376
ErhI CCWWGG 1 cut(s) 297
Esp3I CGTCTC 1 cut(s) 1237
FaeI CATG 7 cut(s) 253, 287, 301, 1313, 1538, 1560, 1690
FalI AAGNNNNNCTT 4 cut(s) 723, 755, 805, 837
FatI CATG 7 cut(s) 249, 283, 297, 1309, 1534, 1556, 1686
FauI CCCGC 2 cut(s) 1200, 1627
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 9 cut(s) 217, 699, 843, 855, 858, 957, 981, 1212, 1617
FokI GGATG 1 cut(s) 1049
Fsp4HI GCNGC 9 cut(s) 217, 699, 843, 855, 858, 957, 981, 1212, 1617
FspBI CTAG 4 cut(s) 95, 213, 407, 584
GlaI GCGC 1 cut(s) 376
GluI GCNGC 9 cut(s) 217, 699, 843, 855, 858, 957, 981, 1212, 1617
HaeII RGCGCY 1 cut(s) 378
HaeIII GGCC 2 cut(s) 889, 1539
HapII CCGG 3 cut(s) 930, 1250, 1745
HgaI GACGC 1 cut(s) 272
HhaI GCGC 1 cut(s) 377
Hin1I GRCGYC 2 cut(s) 264, 375
Hin1II CATG 7 cut(s) 253, 287, 301, 1313, 1538, 1560, 1690
Hin6I GCGC 1 cut(s) 375
HinP1I GCGC 1 cut(s) 375
HincII GTYRAC 1 cut(s) 1459
HindII GTYRAC 1 cut(s) 1459
HindIII AAGCTT 3 cut(s) 737, 867, 1344
HinfI GANTC 7 cut(s) 350, 362, 1255, 1422, 1481, 1730, 1763
HpaII CCGG 3 cut(s) 930, 1250, 1745
HphI GGTGA 1 cut(s) 368
Hpy166II GTNNAC 5 cut(s) 49, 440, 935, 1244, 1459
Hpy188III TCNNGA 6 cut(s) 124, 284, 1168, 1672, 1705, 1793
Hpy8I GTNNAC 5 cut(s) 49, 440, 935, 1244, 1459
HpyAV CCTTC 7 cut(s) 391, 714, 1219, 1433, 1541, 1799, 1800
HpyCH4IV ACGT 2 cut(s) 1186, 1627
HpySE526I ACGT 2 cut(s) 1186, 1627
Hsp92I GRCGYC 2 cut(s) 264, 375
Hsp92II CATG 7 cut(s) 253, 287, 301, 1313, 1538, 1560, 1690
HspAI GCGC 1 cut(s) 375
KasI GGCGCC 1 cut(s) 374
LguI GCTCTTC 3 cut(s) 832, 1587, 1811
LmnI GCTCC 2 cut(s) 103, 962
Lsp1109I GCAGC 9 cut(s) 228, 710, 841, 854, 869, 968, 992, 1223, 1628
LweI GCATC 5 cut(s) 685, 700, 889, 1171, 1359
MaeI CTAG 4 cut(s) 95, 213, 407, 584
MaeII ACGT 2 cut(s) 1186, 1627
MaeIII GTNAC 3 cut(s) 338, 356, 1335
MfeI CAATTG 2 cut(s) 187, 1811
MflI RGATCY 6 cut(s) 91, 496, 563, 662, 1170, 1834
MhlI GDGCHC 1 cut(s) 1507
Mly113I GGCGCC 1 cut(s) 375
MlyI GAGTC 1 cut(s) 1757
MmeI TCCRAC 4 cut(s) 1014, 1092, 1138, 1260
MroXI GAANNNNTTC 2 cut(s) 738, 1788
MseI TTAA 7 cut(s) 18, 315, 456, 632, 995, 1025, 1739
MspA1I CMGCKG 2 cut(s) 135, 983
MspI CCGG 3 cut(s) 930, 1250, 1745
MspR9I CCNGG 4 cut(s) 1049, 1250, 1251, 1745
MunI CAATTG 2 cut(s) 187, 1811
Mva1269I GAATGC 4 cut(s) 1274, 1582, 1619, 1714
MvaI CCWGG 1 cut(s) 1049
NarI GGCGCC 1 cut(s) 375
NciI CCSGG 3 cut(s) 1250, 1251, 1745
NcoI CCATGG 1 cut(s) 297
NlaIII CATG 7 cut(s) 253, 287, 301, 1313, 1538, 1560, 1690
NlaIV GGNNCC 4 cut(s) 147, 376, 473, 1305
NmuCI GTSAC 2 cut(s) 338, 356
NspI RCATGY 1 cut(s) 1313
PaeR7I CTCGAG 1 cut(s) 425
PagI TCATGA 1 cut(s) 283
PceI AGGCCT 1 cut(s) 889
PciSI GCTCTTC 3 cut(s) 832, 1587, 1811
PcsI WCGNNNNNNNCGW 1 cut(s) 748
PctI GAATGC 4 cut(s) 1274, 1582, 1619, 1714
PdmI GAANNNNTTC 2 cut(s) 738, 1788
PfeI GAWTC 6 cut(s) 350, 362, 1255, 1422, 1481, 1730
PkrI GCNGC 9 cut(s) 218, 700, 844, 856, 859, 958, 982, 1213, 1618
PleI GAGTC 1 cut(s) 1757
PluTI GGCGCC 1 cut(s) 378
PpsI GAGTC 1 cut(s) 1757
Ppu21I YACGTR 1 cut(s) 1628
PsiI TTATAA 1 cut(s) 1410
Psp6I CCWGG 1 cut(s) 1047
PspGI CCWGG 1 cut(s) 1047
PspN4I GGNNCC 4 cut(s) 147, 376, 473, 1305
PspPI GGNCC 3 cut(s) 81, 935, 1318
PspXI VCTCGAGB 1 cut(s) 425
PstI CTGCAG 2 cut(s) 859, 1213
PsuI RGATCY 6 cut(s) 91, 496, 563, 662, 1170, 1834
PvuII CAGCTG 1 cut(s) 983
RsaI GTAC 2 cut(s) 1088, 1533
RsaNI GTAC 2 cut(s) 1087, 1532
SapI GCTCTTC 3 cut(s) 832, 1587, 1811
SaqAI TTAA 7 cut(s) 18, 315, 456, 632, 995, 1025, 1739
SatI GCNGC 9 cut(s) 217, 699, 843, 855, 858, 957, 981, 1212, 1617
Sau96I GGNCC 3 cut(s) 81, 935, 1318
SchI GAGTC 1 cut(s) 1757
ScrFI CCNGG 4 cut(s) 1049, 1250, 1251, 1745
SduI GDGCHC 1 cut(s) 1507
SfaNI GCATC 5 cut(s) 685, 700, 889, 1171, 1359
SfcI CTRYAG 2 cut(s) 855, 1209
SfoI GGCGCC 1 cut(s) 376
Sfr274I CTCGAG 1 cut(s) 425
SinI GGWCC 3 cut(s) 81, 935, 1318
SlaI CTCGAG 1 cut(s) 425
SmaI CCCGGG 1 cut(s) 1251
SmlI CTYRAG 3 cut(s) 425, 939, 1166
SmoI CTYRAG 3 cut(s) 425, 939, 1166
SnaBI TACGTA 1 cut(s) 1628
SseBI AGGCCT 1 cut(s) 889
SsiI CCGC 5 cut(s) 135, 611, 761, 1193, 1634
SspDI GGCGCC 1 cut(s) 374
SspMI CTAG 4 cut(s) 95, 213, 407, 584
StuI AGGCCT 1 cut(s) 889
StyD4I CCNGG 4 cut(s) 1047, 1248, 1249, 1743
StyI CCWWGG 1 cut(s) 297
TaiI ACGT 2 cut(s) 1189, 1630
TaqI TCGA 5 cut(s) 117, 426, 538, 742, 1524
TatI WGTACW 1 cut(s) 1531
TfiI GAWTC 6 cut(s) 350, 362, 1255, 1422, 1481, 1730
Tru1I TTAA 7 cut(s) 18, 315, 456, 632, 995, 1025, 1739
Tru9I TTAA 7 cut(s) 18, 315, 456, 632, 995, 1025, 1739
TscAI CASTG 3 cut(s) 58, 343, 349
TseFI GTSAC 2 cut(s) 338, 356
TseI GCWGC 9 cut(s) 216, 698, 842, 854, 857, 956, 980, 1211, 1616
Tsp45I GTSAC 2 cut(s) 338, 356
TspDTI ATGAA 7 cut(s) 272, 339, 720, 864, 1053, 1452, 1505
TspGWI ACGGA 1 cut(s) 1532
TspMI CCCGGG 1 cut(s) 1249
TspRI CASTG 3 cut(s) 58, 343, 349
VpaK11BI GGWCC 3 cut(s) 81, 935, 1318
XagI CCTNNNNNAGG 1 cut(s) 883
XapI RAATTY 3 cut(s) 997, 1075, 1784
XceI RCATGY 1 cut(s) 1313
XhoI CTCGAG 1 cut(s) 425
XmaI CCCGGG 1 cut(s) 1249
XmiI GTMKAC 1 cut(s) 48
XmnI GAANNNNTTC 2 cut(s) 738, 1788
XspI CTAG 4 cut(s) 95, 213, 407, 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.