Coiled-coil domain containing protein (DUF2052)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0308841 |
| rosa_roxburghii | Rroxscaffold_6G00406130 |
| rosa_samantha | Rh7AG269400 Rh7CG288600 |
| rosa_wichuraiana | Rw0G011010 Rw2G012600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 56, 69 |
| AcoI | YGGCCR | 2 cut(s) | 36, 75 |
| AcsI | RAATTY | 1 cut(s) | 31 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 34, 138 |
| AluBI | AGCT | 2 cut(s) | 92, 232 |
| AluI | AGCT | 2 cut(s) | 92, 232 |
| AlwI | GGATC | 2 cut(s) | 56, 69 |
| AoxI | GGCC | 3 cut(s) | 36, 44, 75 |
| ApeKI | GCWGC | 1 cut(s) | 92 |
| ApoI | RAATTY | 1 cut(s) | 31 |
| AsuHPI | GGTGA | 1 cut(s) | 172 |
| BalI | TGGCCA | 1 cut(s) | 77 |
| BamHI | GGATCC | 1 cut(s) | 61 |
| BbvI | GCAGC | 1 cut(s) | 79 |
| BisI | GCNGC | 1 cut(s) | 93 |
| BlsI | GCNGC | 1 cut(s) | 94 |
| BmiI | GGNNCC | 1 cut(s) | 63 |
| BmsI | GCATC | 2 cut(s) | 42, 109 |
| BpuEI | CTTGAG | 1 cut(s) | 108 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 161, 191 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 34, 138 |
| Bse1I | ACTGG | 1 cut(s) | 78 |
| BseGI | GGATG | 1 cut(s) | 112 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 34, 138 |
| BseNI | ACTGG | 1 cut(s) | 78 |
| BseRI | GAGGAG | 3 cut(s) | 31, 182, 225 |
| BseXI | GCAGC | 1 cut(s) | 79 |
| BshFI | GGCC | 3 cut(s) | 38, 46, 77 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 34, 138 |
| BsnI | GGCC | 3 cut(s) | 38, 46, 77 |
| Bsp143I | GATC | 1 cut(s) | 61 |
| BspANI | GGCC | 3 cut(s) | 38, 46, 77 |
| BspLI | GGNNCC | 1 cut(s) | 63 |
| BspPI | GGATC | 2 cut(s) | 56, 69 |
| BsrI | ACTGG | 1 cut(s) | 78 |
| BssMI | GATC | 1 cut(s) | 61 |
| BstDEI | CTNAG | 1 cut(s) | 48 |
| BstF5I | GGATG | 1 cut(s) | 112 |
| BstKTI | GATC | 1 cut(s) | 64 |
| BstMBI | GATC | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 52, 83, 92 |
| BstV1I | GCAGC | 1 cut(s) | 79 |
| BstX2I | RGATCY | 1 cut(s) | 61 |
| BstYI | RGATCY | 1 cut(s) | 61 |
| BsuRI | GGCC | 3 cut(s) | 38, 46, 77 |
| BtsCI | GGATG | 1 cut(s) | 112 |
| BtsIMutI | CAGTG | 1 cut(s) | 85 |
| CviJI | RGCY | 5 cut(s) | 38, 46, 77, 92, 232 |
| CviKI_1 | RGCY | 5 cut(s) | 38, 46, 77, 92, 232 |
| DdeI | CTNAG | 1 cut(s) | 48 |
| DpnI | GATC | 1 cut(s) | 63 |
| DpnII | GATC | 1 cut(s) | 61 |
| EaeI | YGGCCR | 2 cut(s) | 36, 75 |
| Eco147I | AGGCCT | 1 cut(s) | 46 |
| FaiI | YATR | 3 cut(s) | 72, 102, 158 |
| Fnu4HI | GCNGC | 1 cut(s) | 93 |
| FokI | GGATG | 1 cut(s) | 119 |
| Fsp4HI | GCNGC | 1 cut(s) | 93 |
| GluI | GCNGC | 1 cut(s) | 93 |
| HaeIII | GGCC | 3 cut(s) | 38, 46, 77 |
| HinfI | GANTC | 1 cut(s) | 170 |
| HphI | GGTGA | 1 cut(s) | 172 |
| HpyAV | CCTTC | 1 cut(s) | 157 |
| HpyCH4IV | ACGT | 1 cut(s) | 235 |
| HpyCH4V | TGCA | 1 cut(s) | 95 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 52, 83, 92 |
| HpyF3I | CTNAG | 1 cut(s) | 48 |
| HpySE526I | ACGT | 1 cut(s) | 235 |
| Kzo9I | GATC | 1 cut(s) | 61 |
| LmnI | GCTCC | 1 cut(s) | 190 |
| LpnPI | CCDG | 3 cut(s) | 41, 91, 123 |
| Lsp1109I | GCAGC | 1 cut(s) | 79 |
| LweI | GCATC | 2 cut(s) | 42, 109 |
| MaeII | ACGT | 1 cut(s) | 235 |
| MaeIII | GTNAC | 1 cut(s) | 200 |
| MalI | GATC | 1 cut(s) | 63 |
| MboI | GATC | 1 cut(s) | 61 |
| MboII | GAAGA | 1 cut(s) | 20 |
| MflI | RGATCY | 1 cut(s) | 61 |
| MlsI | TGGCCA | 1 cut(s) | 77 |
| MluCI | AATT | 1 cut(s) | 31 |
| MluNI | TGGCCA | 1 cut(s) | 77 |
| MlyI | GAGTC | 1 cut(s) | 179 |
| MnlI | CCTC | 4 cut(s) | 9, 75, 160, 203 |
| Mox20I | TGGCCA | 1 cut(s) | 77 |
| MscI | TGGCCA | 1 cut(s) | 77 |
| MslI | CAYNNNNRTG | 1 cut(s) | 105 |
| Msp20I | TGGCCA | 1 cut(s) | 77 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 52, 83, 92 |
| NdeII | GATC | 1 cut(s) | 61 |
| NlaIV | GGNNCC | 1 cut(s) | 63 |
| PceI | AGGCCT | 1 cut(s) | 46 |
| PkrI | GCNGC | 1 cut(s) | 94 |
| PleI | GAGTC | 1 cut(s) | 178 |
| PpsI | GAGTC | 1 cut(s) | 178 |
| PspN4I | GGNNCC | 1 cut(s) | 63 |
| PsuI | RGATCY | 1 cut(s) | 61 |
| RseI | CAYNNNNRTG | 1 cut(s) | 105 |
| SatI | GCNGC | 1 cut(s) | 93 |
| Sau3AI | GATC | 1 cut(s) | 61 |
| SchI | GAGTC | 1 cut(s) | 179 |
| SetI | ASST | 3 cut(s) | 94, 234, 238 |
| SfaNI | GCATC | 2 cut(s) | 42, 109 |
| SgeI | CNNG | 4 cut(s) | 68, 90, 137, 150 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 105 |
| SmlI | CTYRAG | 1 cut(s) | 123 |
| SmoI | CTYRAG | 1 cut(s) | 123 |
| Sse9I | AATT | 1 cut(s) | 31 |
| SseBI | AGGCCT | 1 cut(s) | 46 |
| StuI | AGGCCT | 1 cut(s) | 46 |
| TaiI | ACGT | 1 cut(s) | 238 |
| TasI | AATT | 1 cut(s) | 31 |
| TscAI | CASTG | 1 cut(s) | 85 |
| TseI | GCWGC | 1 cut(s) | 92 |
| TspGWI | ACGGA | 1 cut(s) | 119 |
| TspRI | CASTG | 1 cut(s) | 85 |
| XapI | RAATTY | 1 cut(s) | 31 |