Rroxscaffold_6G00422340

Histidine kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
43263430 .. 43267474
4045 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00422340.1

Sequence Viewer

Length: 3060 bp
ATGTTCTTCTCACATGAAGCACTCAGCAAATCAAATTTCAGCGTCCACTCCACTGAAAAATTGCTAAATCCATTAAATCCGTCAACAATAAAACTGGCAAGGTCTTTGAGTTCATCACTCAATGGAACTGAACTAGATTTCAGTACCATCCAAACAACGGTTGCACCAACATTGTTTCTAGCACTTTCGACAATTGCACACATCTCACAGGTTACTTATGTTGGAATGGATGGCCTATTATTCTCACTTCACAACTCTGAATATCGTGAATGGGGTCGATTTGGATTGGGTAGTCAAACTACTGTAGTGTTCTCTAATACTACATCTTCTGGAAATTGGTATACTCAACCAGTAAATAGGGACACTGGGATGTTATACGGTGTCGCAGTAAATATTGATTCAAACTCTATGTTCACACCAAATGCTAGTTGGTTCCAACAAGCCTTGAACAACACGAGTGGGTATTCTTGGTTAGGAACCGGATGTGATGGAGCTCAAAATAGCTTGTTTTTTAGTAGTGTTGCTGTAGACGGAAGAGGTGTGGTTTCGCTCGGTATGCAAGCACAAGTTGTTGTTGATCATTTTAACGCGGTAGATTTTCATGACGGTTATTTTCACCTAGCTACTTCAGATGGCCAAGTGATTGTGCAATCAAAACTTCCCAAAACCCAATTTCAGATAAGCAACAACACGGTTACAGTGCAAGCAGTGAATCTTTATGGTGTTGTAATAGGTGTCGTTGATAGATTCTTATGCAATCAGTCATCTAGTCACTTATTGAAAATAAATGGAATAAAGTACAGAGTGTATTGTGATACCCTCAAGATTGTTGGAATCCCATCGGTATATGTACTGACTTATCCAACATTTAATGGACTTTTGCACAAAGTCTACATATATAGAGCTTTACTTGGGCTTCTGTTGTTCATAATTCTAATTTCTCTATGCTTCTTTATATTCTGGATAATAAGAGCTGCAAATAGAGAAATGATCTTATGCGCACGTATCATTAAACAAGAAGGTGCAACTCGCCAAGCAGAGCGCAAAAGTATGAACAAAACTAAAGCCTTTAGTAGAGCAAACCATGATGTGCGCGCTTCTTTGGCAGCCATCACTGGTTTGATAGAGTTGTGTCATCAAGATGCCAAACCAGAATCTGAGCTAGCAATCAACTTGGGACAAATGGATACTTGTACAAAGGACCTCATAGGAATATTGAACACTGTTCTGGACATAAGTAAAATTGAAGCTGGGAAAGTGCAACTTGAAGTAGAAGAATTCAATTTAGCTCAGCTCCTCGAGGATGTTGTTGATATGTTCTATCCTATTGCTATAAAGAAAGATGTAGATATATTGCTTGATCCTTGTGACAACTCACTTGCCAAAACATGTCATGTAAGGGGTGATAGAGGAAAACTCAAACAGATCTTGTGCAACTTGATTAGTAATGCTGTGAAGTTTACATCCGAAGGTCATATCACAGTTCGTGCCATGGTTGCGAAAACAAGTTATGAAAACTCAATAATTGCTTCTAATCGTAGTCGTATGTTGAAGTGGCCATGGTGGTTTTACAAGAGAGAGGAAGATTTCAATGATTTGAATGTCCTTCATAGGGCTGAAAAAGACCCTAATACCACAAAGTTTGTCATTGAGGTCGATGATACAGGCGAGGGAATTCCTAAAGACAAACGAGAATTTGTTTTTGAAAACTTTGTTCAAGTTACAGACAATGCTACAGGAAAAGAAGGTTCTGGTTTGGGACTTGGTATTGTTGAATCTTTGGTGCGTCTAATGGGTGGAGAGATAAAAATTCTTGATAAAGAAGCTGGTGAGAGAGGAAGTTGCTTCAGATTTGATGTTTCTCTTCAGACATATAAGCCAGAGTTCGGTGAAATGGAAGAGGAATATTGGCCACTTCGACCTTTTGGAATACACCTTTTGCCACCGTCACCTAAACTAGAAGGATCTCGTGTTGTACTCTTTATAAGAGGCAATGAACGAAGAAAGGTGTTGGTGAAATATATCAGAAACTTGAACATAAAAGTTACAACTGTAAAGCATGCTAAACAACTTGTTCCGACACTTGGGAAGATCAAACACAAGTTAGACCTTTCCTATTTCAGTTATTCGGAGACCCCATCAGAGTTTCTTGAACATATAAACACATCTCCATCCAACAACTCCGATTCAAGACCAAGTGATGAGTCTCAAAGTATCAAGGAAATTGAAGAAGATAAAAAGACCAACTCGAGAAGCTTGCTTGCAGGCATTGTCCTAATAGTGGTTGACACAAATGCTGGTGCTTTCTCTGAGCTATATGACTGTGTGGCTAACTTCAGGAAAGGCATTCAAAGTTCTAAATGCAAGGTTGTGTGGTTAGACAATTCAATCACGCGAAACACAATGCAGCTAGATGAGCATAAGCTTGCCCCTCCAAATGATTATATCATATACAAACCATTTCATGGATCACGCTTGTACAAAGTTCTAGGATTAATACCTGAACTTAAGGGGTGTAACTTACCAAGGCTCGAAACAAGAAAAGTAGACACTCAAGAAGCGCAACACGACAAGTCGGTGGAACAAGTAGAGATAGTCATAGATAAAGGTGATGTAGAAAAAAGTGATAGTAGTCTGAAGCTGTTGTATGGAAAGAGAGTTTTGGTTGTCGATGATAATGAAGTGTTGCGCAGGATTACTAGTTCAAATCTTTGCAAACTGGGAGCCGTTGTTGAAGTTTGCCAGAATGGGAAAGAGGCATTTGATCGAGTTTGTAAAGCTCTAAGTGATCACAGTGAGGAGGATAAGACTAGATCCATTCCTTACGACTATATTTTCATGGATTGCGAGATGCCGATAATAGATGGATATGAAGCAACAAGACTGATAAGGAAGGAGGAAAAGAAGTATGACATTCATCTTCCAATTATAGCATTAACAGCTCATGCAATGACTGAGAAAGTGAGCAAGACACTTGAAGCAGGAATGGATTTCCATTTGACTAAACCGTTTCAGGTGGACAGTTTGATGAAAATTATTCAATTGATTGACAACAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1019

Amino Acids

114.48

Weight (kDa)

6.6

Isoelectric Point (pI)

28.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HisKA PF00512 354 - 418 2.1e-06 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 546 - 622 1.2e-14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response_reg PF00072 887 - 1014 1.3e-21 Response regulator receiver domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0016705)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G47430
malus_domestica MD04G1194300.v1.1
prunus_persica Prupe.6G314200_v2.0.a1
pyrus_communis pycom04g17180
rosa_chinensis RchiOBHm_Chr3g0456951
rosa_laevigata RLG00000025260
rosa_multiflora Rmu_sc0016008.1_g000003
rosa_roxburghii Rroxscaffold_6G00422340
rosa_rugosa Rorug03G0017600
rosa_samantha Rh3AG077600 Rh3BG079500 Rh3CG079400 Rh3DG081200
rosa_wichuraiana Rw3G006650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1985
AbsI CCTCGAGG 1 cut(s) 1298
Acc16I TGCGCA 2 cut(s) 1000, 2690
AccB7I CCANNNNNTGG 1 cut(s) 2465
AccI GTMKAC 4 cut(s) 341, 528, 891, 2547
AccII CGCG 3 cut(s) 590, 1095, 2395
AciI CCGC 1 cut(s) 590
AclWI GGATC 4 cut(s) 1355, 1972, 2476, 2808
AcoI YGGCCR 3 cut(s) 634, 1556, 1910
AcsI RAATTY 5 cut(s) 34, 1277, 1674, 1694, 1809
AcuI CTGAAG 5 cut(s) 612, 1831, 1850, 2320, 2657
AfaI GTAC 6 cut(s) 145, 800, 852, 1195, 1977, 2480
AfiI CCNNNNNNNGG 6 cut(s) 157, 1612, 1886, 2084, 2281, 2465
AflII CTTAAG 1 cut(s) 2507
AflIII ACRYGT 1 cut(s) 1388
AhlI ACTAGT 1 cut(s) 2699
AloI GAACNNNNNNTCC 2 cut(s) 2686, 2718
Alw21I GWGCWC 1 cut(s) 496
Alw26I GTCTC 2 cut(s) 2126, 2211
AlwI GGATC 4 cut(s) 1355, 1972, 2476, 2808
AlwNI CAGNNNCTG 1 cut(s) 1157
Ama87I CYCGRG 2 cut(s) 1298, 2248
AoxI GGCC 4 cut(s) 232, 634, 1556, 1910
ApeKI GCWGC 3 cut(s) 974, 1106, 2407
ApoI RAATTY 5 cut(s) 34, 1277, 1674, 1694, 1809
AseI ATTAAT 1 cut(s) 2495
AspLEI GCGC 6 cut(s) 1001, 1044, 1095, 1097, 2563, 2691
AspS9I GGNCC 1 cut(s) 1201
AsuHPI GGTGA 7 cut(s) 608, 1415, 1841, 1901, 1941, 2026, 2621
AsuNHI GCTAGC 1 cut(s) 1162
AvaI CYCGRG 2 cut(s) 1298, 2248
AvaII GGWCC 1 cut(s) 1201
BalI TGGCCA 3 cut(s) 636, 1558, 1912
BanII GRGCYC 1 cut(s) 496
BauI CACGAG 2 cut(s) 454, 1968
Bbv12I GWGCWC 1 cut(s) 496
BbvI GCAGC 3 cut(s) 961, 1118, 2419
BccI CCATC 9 cut(s) 155, 224, 482, 626, 847, 1118, 2146, 2179, 2858
BceAI ACGGC 1 cut(s) 2711
BcgI CGANNNNNNTGC 2 cut(s) 2239, 2273
BciVI GTATCC 1 cut(s) 1180
BclI TGATCA 2 cut(s) 577, 2788
BcoDI GTCTC 2 cut(s) 2126, 2211
BcuI ACTAGT 1 cut(s) 2699
BfmI CTRYAG 3 cut(s) 303, 525, 1734
BfrI CTTAAG 1 cut(s) 2507
BfuI GTATCC 1 cut(s) 1180
BglII AGATCT 1 cut(s) 1425
BisI GCNGC 3 cut(s) 975, 1107, 2408
BlpI GCTNAGC 1 cut(s) 1290
BlsI GCNGC 3 cut(s) 976, 1108, 2409
Bme18I GGWCC 1 cut(s) 1201
BmeT110I CYCGRG 2 cut(s) 1298, 2248
BmgT120I GGNCC 1 cut(s) 1201
BmiI GGNNCC 3 cut(s) 434, 478, 2725
BmrI ACTGGG 2 cut(s) 375, 2729
BmsI GCATC 2 cut(s) 1132, 2841
BmtI GCTAGC 1 cut(s) 1166
BmuI ACTGGG 2 cut(s) 375, 2729
BplI GAGNNNNNCTC 2 cut(s) 1401, 1433
Bpu1102I GCTNAGC 1 cut(s) 1290
BpuEI CTTGAG 2 cut(s) 806, 2538
BsaAI YACGTR 1 cut(s) 1004
BsaI GGTCTC 1 cut(s) 2126
BsaJI CCNNGG 3 cut(s) 1491, 1559, 2525
BsaWI WCCGGW 1 cut(s) 479
BsaXI ACNNNNNCTCC 2 cut(s) 2715, 2745
Bsc4I CCNNNNNNNGG 6 cut(s) 157, 1612, 1886, 2084, 2281, 2465
Bse1I ACTGG 5 cut(s) 99, 350, 370, 1120, 2724
Bse3DI GCAATG 2 cut(s) 1999, 2955
BseDI CCNNGG 3 cut(s) 1491, 1559, 2525
BseGI GGATG 7 cut(s) 147, 235, 375, 488, 1309, 1463, 2171
BseLI CCNNNNNNNGG 6 cut(s) 157, 1612, 1886, 2084, 2281, 2465
BseMI GCAATG 2 cut(s) 1999, 2955
BseMII CTCAG 5 cut(s) 37, 1149, 1304, 2301, 2946
BseNI ACTGG 5 cut(s) 99, 350, 370, 1120, 2724
BsePI GCGCGC 1 cut(s) 1093
BseRI GAGGAG 2 cut(s) 1286, 2813
BseXI GCAGC 3 cut(s) 961, 1118, 2419
BseYI CCCAGC 1 cut(s) 1250
Bsh1236I CGCG 3 cut(s) 590, 1095, 2395
BshFI GGCC 4 cut(s) 234, 636, 1558, 1912
BsiHKAI GWGCWC 1 cut(s) 496
BsiHKCI CYCGRG 2 cut(s) 1298, 2248
BsiSI CCGG 1 cut(s) 480
BslFI GGGAC 3 cut(s) 374, 1191, 1773
BslI CCNNNNNNNGG 6 cut(s) 157, 1612, 1886, 2084, 2281, 2465
BsmAI GTCTC 2 cut(s) 2126, 2211
BsmFI GGGAC 3 cut(s) 374, 1191, 1773
BsmI GAATGC 1 cut(s) 2346
BsnI GGCC 4 cut(s) 234, 636, 1558, 1912
Bso31I GGTCTC 1 cut(s) 2126
BsoBI CYCGRG 2 cut(s) 1298, 2248
Bsp1286I GDGCHC 1 cut(s) 496
Bsp1407I TGTACA 2 cut(s) 1193, 2478
Bsp1720I GCTNAGC 1 cut(s) 1290
Bsp19I CCATGG 2 cut(s) 1491, 1559
BspACI CCGC 1 cut(s) 590
BspANI GGCC 4 cut(s) 234, 636, 1558, 1912
BspCNI CTCAG 5 cut(s) 36, 1150, 1303, 2302, 2947
BspFNI CGCG 3 cut(s) 590, 1095, 2395
BspHI TCATGA 1 cut(s) 601
BspLI GGNNCC 3 cut(s) 434, 478, 2725
BspOI GCTAGC 1 cut(s) 1166
BspPI GGATC 4 cut(s) 1355, 1972, 2476, 2808
BspTI CTTAAG 1 cut(s) 2507
BspTNI GGTCTC 1 cut(s) 2126
BsrDI GCAATG 2 cut(s) 1999, 2955
BsrGI TGTACA 2 cut(s) 1193, 2478
BsrI ACTGG 5 cut(s) 99, 350, 370, 1120, 2724
BssECI CCNNGG 3 cut(s) 1491, 1559, 2525
BssHII GCGCGC 1 cut(s) 1093
BssNAI GTATAC 1 cut(s) 342
BssSI CACGAG 2 cut(s) 454, 1968
BssT1I CCWWGG 3 cut(s) 1491, 1559, 2525
Bst1107I GTATAC 1 cut(s) 342
Bst2BI CACGAG 2 cut(s) 454, 1968
Bst6I CTCTTC 3 cut(s) 529, 1869, 1893
BstAFI CTTAAG 1 cut(s) 2507
BstAUI TGTACA 2 cut(s) 1193, 2478
BstBAI YACGTR 1 cut(s) 1004
BstC8I GCNNGC 9 cut(s) 561, 705, 1095, 1164, 2061, 2258, 2262, 2266, 2427
BstDEI CTNAG 6 cut(s) 23, 1158, 1290, 2310, 2783, 2955
BstDSI CCRYGG 2 cut(s) 1491, 1559
BstF5I GGATG 7 cut(s) 147, 235, 375, 488, 1309, 1463, 2171
BstFNI CGCG 3 cut(s) 590, 1095, 2395
BstHHI GCGC 6 cut(s) 1001, 1044, 1095, 1097, 2563, 2691
BstMAI GTCTC 2 cut(s) 2126, 2211
BstMWI GCNNNNNNNGC 5 cut(s) 556, 1103, 1496, 2416, 2939
BstNSI RCATGY 2 cut(s) 1392, 2063
BstSFI CTRYAG 3 cut(s) 303, 525, 1734
BstUI CGCG 3 cut(s) 590, 1095, 2395
BstV1I GCAGC 3 cut(s) 961, 1118, 2419
BstX2I RGATCY 3 cut(s) 1425, 1964, 2813
BstYI RGATCY 3 cut(s) 1425, 1964, 2813
BstZ17I GTATAC 1 cut(s) 342
BsuI GTATCC 1 cut(s) 1180
BsuRI GGCC 4 cut(s) 234, 636, 1558, 1912
BtgI CCRYGG 2 cut(s) 1491, 1559
BtsCI GGATG 7 cut(s) 147, 235, 375, 488, 1309, 1463, 2171
BtsI GCAGTG 1 cut(s) 714
BtsIMutI CAGTG 7 cut(s) 51, 363, 705, 714, 1113, 1221, 2800
Cac8I GCNNGC 9 cut(s) 561, 705, 1095, 1164, 2061, 2258, 2262, 2266, 2427
CaiI CAGNNNCTG 1 cut(s) 1157
CciI TCATGA 1 cut(s) 601
CfoI GCGC 6 cut(s) 1001, 1044, 1095, 1097, 2563, 2691
Cfr13I GGNCC 1 cut(s) 1201
CseI GACGC 2 cut(s) 31, 1775
Csp6I GTAC 6 cut(s) 144, 799, 851, 1194, 1976, 2479
CspCI CAANNNNNGTGG 4 cut(s) 439, 474, 1624, 1659
CviQI GTAC 6 cut(s) 144, 799, 851, 1194, 1976, 2479
DdeI CTNAG 6 cut(s) 23, 1158, 1290, 2310, 2783, 2955
EaeI YGGCCR 3 cut(s) 634, 1556, 1910
Eam1104I CTCTTC 3 cut(s) 529, 1869, 1893
EarI CTCTTC 3 cut(s) 529, 1869, 1893
Ecl136II GAGCTC 1 cut(s) 494
Eco130I CCWWGG 3 cut(s) 1491, 1559, 2525
Eco24I GRGCYC 1 cut(s) 496
Eco31I GGTCTC 1 cut(s) 2126
Eco47I GGWCC 1 cut(s) 1201
Eco53kI GAGCTC 1 cut(s) 494
Eco57I CTGAAG 5 cut(s) 612, 1831, 1850, 2320, 2657
Eco88I CYCGRG 2 cut(s) 1298, 2248
EcoICRI GAGCTC 1 cut(s) 494
EcoO109I RGGNCCY 1 cut(s) 1201
EcoRI GAATTC 2 cut(s) 1277, 1674
EcoT14I CCWWGG 3 cut(s) 1491, 1559, 2525
EcoT38I GRGCYC 1 cut(s) 496
ErhI CCWWGG 3 cut(s) 1491, 1559, 2525
FalI AAGNNNNNCTT 2 cut(s) 1248, 1280
FaqI GGGAC 3 cut(s) 374, 1191, 1773
FbaI TGATCA 2 cut(s) 577, 2788
FblI GTMKAC 4 cut(s) 341, 528, 891, 2547
Fnu4HI GCNGC 3 cut(s) 975, 1107, 2408
FokI GGATG 7 cut(s) 134, 242, 382, 495, 1316, 1450, 2158
FriOI GRGCYC 1 cut(s) 496
Fsp4HI GCNGC 3 cut(s) 975, 1107, 2408
FspAI RTGCGCAY 1 cut(s) 1000
FspI TGCGCA 2 cut(s) 1000, 2690
GlaI GCGC 6 cut(s) 1000, 1043, 1094, 1096, 2562, 2690
GluI GCNGC 3 cut(s) 975, 1107, 2408
GsaI CCCAGC 1 cut(s) 1254
HaeIII GGCC 4 cut(s) 234, 636, 1558, 1912
HapII CCGG 1 cut(s) 480
HgaI GACGC 2 cut(s) 31, 1775
HhaI GCGC 6 cut(s) 1001, 1044, 1095, 1097, 2563, 2691
Hin6I GCGC 6 cut(s) 999, 1042, 1093, 1095, 2561, 2689
HinP1I GCGC 6 cut(s) 999, 1042, 1093, 1095, 2561, 2689
HincII GTYRAC 2 cut(s) 84, 2287
HindII GTYRAC 2 cut(s) 84, 2287
HindIII AAGCTT 2 cut(s) 2254, 2423
HinfI GANTC 8 cut(s) 398, 712, 747, 834, 1154, 1775, 2186, 2204
HpaII CCGG 1 cut(s) 480
HphI GGTGA 7 cut(s) 608, 1415, 1841, 1901, 1941, 2026, 2621
HpyAV CCTTC 6 cut(s) 1013, 1463, 1616, 1739, 1955, 2887
HpyCH4IV ACGT 1 cut(s) 1003
HpyF10VI GCNNNNNNNGC 5 cut(s) 556, 1103, 1496, 2416, 2939
HpyF3I CTNAG 6 cut(s) 23, 1158, 1290, 2310, 2783, 2955
HpySE526I ACGT 1 cut(s) 1003
HspAI GCGC 6 cut(s) 999, 1042, 1093, 1095, 2561, 2689
Ksp22I TGATCA 2 cut(s) 577, 2788
LmnI GCTCC 3 cut(s) 491, 1299, 2723
Lsp1109I GCAGC 3 cut(s) 961, 1118, 2419
LweI GCATC 2 cut(s) 1132, 2841
MaeII ACGT 1 cut(s) 1003
MaeIII GTNAC 8 cut(s) 211, 694, 770, 1367, 1720, 1947, 2044, 2516
MfeI CAATTG 2 cut(s) 192, 3041
MflI RGATCY 3 cut(s) 1425, 1964, 2813
MhlI GDGCHC 1 cut(s) 496
MlsI TGGCCA 3 cut(s) 636, 1558, 1912
MluNI TGGCCA 3 cut(s) 636, 1558, 1912
MlyI GAGTC 1 cut(s) 2213
MmeI TCCRAC 6 cut(s) 202, 460, 811, 887, 2102, 2199
Mox20I TGGCCA 3 cut(s) 636, 1558, 1912
MscI TGGCCA 3 cut(s) 636, 1558, 1912
MseI TTAA 7 cut(s) 74, 585, 870, 1011, 2495, 2508, 2936
MslI CAYNNNNRTG 2 cut(s) 368, 1140
Msp20I TGGCCA 3 cut(s) 636, 1558, 1912
MspCI CTTAAG 1 cut(s) 2507
MspI CCGG 1 cut(s) 480
MunI CAATTG 2 cut(s) 192, 3041
Mva1269I GAATGC 1 cut(s) 2346
MvnI CGCG 3 cut(s) 590, 1095, 2395
MwoI GCNNNNNNNGC 5 cut(s) 556, 1103, 1496, 2416, 2939
NcoI CCATGG 2 cut(s) 1491, 1559
NheI GCTAGC 1 cut(s) 1162
NlaIV GGNNCC 3 cut(s) 434, 478, 2725
NmuCI GTSAC 3 cut(s) 770, 1367, 1947
NsbI TGCGCA 2 cut(s) 1000, 2690
NspI RCATGY 2 cut(s) 1392, 2063
PaeI GCATGC 1 cut(s) 2063
PaeR7I CTCGAG 2 cut(s) 1298, 2248
PagI TCATGA 1 cut(s) 601
PauI GCGCGC 1 cut(s) 1093
PciI ACATGT 1 cut(s) 1388
PctI GAATGC 1 cut(s) 2346
PfeI GAWTC 7 cut(s) 398, 712, 747, 834, 1154, 1775, 2186
PflMI CCANNNNNTGG 1 cut(s) 2465
PkrI GCNGC 3 cut(s) 976, 1108, 2409
PleI GAGTC 1 cut(s) 2212
PpsI GAGTC 1 cut(s) 2212
Ppu21I YACGTR 1 cut(s) 1004
PpuMI RGGWCCY 1 cut(s) 1201
PscI ACATGT 1 cut(s) 1388
PshBI ATTAAT 1 cut(s) 2495
PsiI TTATAA 1 cut(s) 1985
Psp124BI GAGCTC 1 cut(s) 496
Psp5II RGGWCCY 1 cut(s) 1201
PspFI CCCAGC 1 cut(s) 1250
PspN4I GGNNCC 3 cut(s) 434, 478, 2725
PspPI GGNCC 1 cut(s) 1201
PspPPI RGGWCCY 1 cut(s) 1201
PspXI VCTCGAGB 1 cut(s) 1298
PstNI CAGNNNCTG 1 cut(s) 1157
PsuI RGATCY 3 cut(s) 1425, 1964, 2813
PteI GCGCGC 1 cut(s) 1093
RsaI GTAC 6 cut(s) 145, 800, 852, 1195, 1977, 2480
RsaNI GTAC 6 cut(s) 144, 799, 851, 1194, 1976, 2479
RseI CAYNNNNRTG 2 cut(s) 368, 1140
SacI GAGCTC 1 cut(s) 496
SaqAI TTAA 7 cut(s) 74, 585, 870, 1011, 2495, 2508, 2936
SatI GCNGC 3 cut(s) 975, 1107, 2408
Sau96I GGNCC 1 cut(s) 1201
SchI GAGTC 1 cut(s) 2213
SduI GDGCHC 1 cut(s) 496
SfaNI GCATC 2 cut(s) 1132, 2841
SfcI CTRYAG 3 cut(s) 303, 525, 1734
Sfr274I CTCGAG 2 cut(s) 1298, 2248
SinI GGWCC 1 cut(s) 1201
SlaI CTCGAG 2 cut(s) 1298, 2248
SmiMI CAYNNNNRTG 2 cut(s) 368, 1140
SmlI CTYRAG 5 cut(s) 821, 1298, 2248, 2507, 2553
SmoI CTYRAG 5 cut(s) 821, 1298, 2248, 2507, 2553
SpeI ACTAGT 1 cut(s) 2699
SphI GCATGC 1 cut(s) 2063
SsiI CCGC 1 cut(s) 590
SspI AATATT 3 cut(s) 394, 1215, 1907
SstI GAGCTC 1 cut(s) 496
StyI CCWWGG 3 cut(s) 1491, 1559, 2525
TaiI ACGT 1 cut(s) 1006
TaqI TCGA 9 cut(s) 188, 277, 1299, 1656, 1918, 2249, 2532, 2670, 2767
TatI WGTACW 5 cut(s) 798, 850, 1193, 1975, 2478
TfiI GAWTC 7 cut(s) 398, 712, 747, 834, 1154, 1775, 2186
Tru1I TTAA 7 cut(s) 74, 585, 870, 1011, 2495, 2508, 2936
Tru9I TTAA 7 cut(s) 74, 585, 870, 1011, 2495, 2508, 2936
TscAI CASTG 7 cut(s) 58, 370, 705, 714, 1120, 1228, 2800
TseFI GTSAC 3 cut(s) 770, 1367, 1947
TseI GCWGC 3 cut(s) 974, 1106, 2407
Tsp45I GTSAC 3 cut(s) 770, 1367, 1947
TspGWI ACGGA 2 cut(s) 69, 546
TspRI CASTG 7 cut(s) 58, 370, 705, 714, 1120, 1228, 2800
Van91I CCANNNNNTGG 1 cut(s) 2465
Vha464I CTTAAG 1 cut(s) 2507
VpaK11BI GGWCC 1 cut(s) 1201
VspI ATTAAT 1 cut(s) 2495
XapI RAATTY 5 cut(s) 34, 1277, 1674, 1694, 1809
XceI RCATGY 2 cut(s) 1392, 2063
XcmI CCANNNNNNNNNTGG 1 cut(s) 426
XhoI CTCGAG 2 cut(s) 1298, 2248
XmiI GTMKAC 4 cut(s) 341, 528, 891, 2547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.