Histidine kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47430 |
| malus_domestica | MD04G1194300.v1.1 |
| prunus_persica | Prupe.6G314200_v2.0.a1 |
| pyrus_communis | pycom04g17180 |
| rosa_chinensis | RchiOBHm_Chr3g0456951 |
| rosa_laevigata | RLG00000025260 |
| rosa_multiflora | Rmu_sc0016008.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00422340 |
| rosa_rugosa | Rorug03G0017600 |
| rosa_samantha | Rh3AG077600 Rh3BG079500 Rh3CG079400 Rh3DG081200 |
| rosa_wichuraiana | Rw3G006650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2036 |
| AarI | CACCTGC | 1 cut(s) | 3055 |
| AbsI | CCTCGAGG | 1 cut(s) | 1349 |
| Acc16I | TGCGCA | 2 cut(s) | 1051, 2741 |
| Acc36I | ACCTGC | 1 cut(s) | 3055 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2516 |
| AccI | GTMKAC | 4 cut(s) | 392, 579, 942, 2598 |
| AccII | CGCG | 3 cut(s) | 1146, 2446, 2524 |
| AclWI | GGATC | 4 cut(s) | 1406, 2023, 2527, 2859 |
| AcoI | YGGCCR | 3 cut(s) | 685, 1607, 1961 |
| AcsI | RAATTY | 4 cut(s) | 85, 1328, 1725, 1745 |
| AcuI | CTGAAG | 5 cut(s) | 663, 1882, 1901, 2371, 2708 |
| AfaI | GTAC | 6 cut(s) | 196, 851, 903, 1246, 2028, 2531 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 208, 1663, 1937, 2135, 2332, 2516 |
| AflII | CTTAAG | 1 cut(s) | 2558 |
| AflIII | ACRYGT | 2 cut(s) | 945, 1439 |
| AhlI | ACTAGT | 1 cut(s) | 2750 |
| Alw21I | GWGCWC | 1 cut(s) | 547 |
| Alw26I | GTCTC | 3 cut(s) | 159, 2177, 2262 |
| AlwI | GGATC | 4 cut(s) | 1406, 2023, 2527, 2859 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1208 |
| Ama87I | CYCGRG | 2 cut(s) | 1349, 2299 |
| AoxI | GGCC | 3 cut(s) | 685, 1607, 1961 |
| ApeKI | GCWGC | 3 cut(s) | 1025, 1157, 2458 |
| ApoI | RAATTY | 4 cut(s) | 85, 1328, 1725, 1745 |
| AseI | ATTAAT | 1 cut(s) | 2546 |
| AspLEI | GCGC | 7 cut(s) | 1052, 1095, 1146, 1148, 2526, 2614, 2742 |
| AspS9I | GGNCC | 1 cut(s) | 1252 |
| AsuHPI | GGTGA | 7 cut(s) | 659, 1466, 1892, 1952, 1992, 2077, 2672 |
| AsuNHI | GCTAGC | 1 cut(s) | 1213 |
| AvaI | CYCGRG | 2 cut(s) | 1349, 2299 |
| AvaII | GGWCC | 1 cut(s) | 1252 |
| BalI | TGGCCA | 3 cut(s) | 687, 1609, 1963 |
| BanII | GRGCYC | 1 cut(s) | 547 |
| BauI | CACGAG | 2 cut(s) | 505, 2019 |
| Bbv12I | GWGCWC | 1 cut(s) | 547 |
| BbvI | GCAGC | 3 cut(s) | 1012, 1169, 2470 |
| BccI | CCATC | 8 cut(s) | 206, 533, 677, 898, 1169, 2197, 2230, 2909 |
| BceAI | ACGGC | 1 cut(s) | 2762 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2290, 2324 |
| BciVI | GTATCC | 1 cut(s) | 1231 |
| BclI | TGATCA | 4 cut(s) | 3, 628, 2815, 2839 |
| BcoDI | GTCTC | 3 cut(s) | 159, 2177, 2262 |
| BcuI | ACTAGT | 1 cut(s) | 2750 |
| BfmI | CTRYAG | 4 cut(s) | 354, 576, 642, 1785 |
| BfrI | CTTAAG | 1 cut(s) | 2558 |
| BfuAI | ACCTGC | 1 cut(s) | 3055 |
| BfuI | GTATCC | 1 cut(s) | 1231 |
| BglII | AGATCT | 1 cut(s) | 1476 |
| BisI | GCNGC | 3 cut(s) | 1026, 1158, 2459 |
| BlpI | GCTNAGC | 1 cut(s) | 1341 |
| BlsI | GCNGC | 3 cut(s) | 1027, 1159, 2460 |
| Bme18I | GGWCC | 1 cut(s) | 1252 |
| BmeT110I | CYCGRG | 2 cut(s) | 1349, 2299 |
| BmgT120I | GGNCC | 1 cut(s) | 1252 |
| BmiI | GGNNCC | 3 cut(s) | 485, 529, 2776 |
| BmrI | ACTGGG | 2 cut(s) | 426, 2780 |
| BmsI | GCATC | 3 cut(s) | 102, 1183, 2892 |
| BmtI | GCTAGC | 1 cut(s) | 1217 |
| BmuI | ACTGGG | 2 cut(s) | 426, 2780 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1452, 1484 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1341 |
| BpuEI | CTTGAG | 2 cut(s) | 857, 2589 |
| BsaAI | YACGTR | 1 cut(s) | 1055 |
| BsaI | GGTCTC | 2 cut(s) | 159, 2177 |
| BsaJI | CCNNGG | 3 cut(s) | 1542, 1610, 2576 |
| BsaWI | WCCGGW | 1 cut(s) | 530 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2766, 2796 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 208, 1663, 1937, 2135, 2332, 2516 |
| Bse1I | ACTGG | 5 cut(s) | 150, 401, 421, 1171, 2775 |
| Bse3DI | GCAATG | 3 cut(s) | 2050, 3006, 3059 |
| BseDI | CCNNGG | 3 cut(s) | 1542, 1610, 2576 |
| BseGI | GGATG | 8 cut(s) | 93, 198, 286, 426, 539, 1360, 1514, 2222 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 208, 1663, 1937, 2135, 2332, 2516 |
| BseMI | GCAATG | 3 cut(s) | 2050, 3006, 3059 |
| BseMII | CTCAG | 6 cut(s) | 88, 149, 1200, 1355, 2352, 2997 |
| BseNI | ACTGG | 5 cut(s) | 150, 401, 421, 1171, 2775 |
| BsePI | GCGCGC | 1 cut(s) | 1144 |
| BseRI | GAGGAG | 2 cut(s) | 1337, 2864 |
| BseXI | GCAGC | 3 cut(s) | 1012, 1169, 2470 |
| BseYI | CCCAGC | 1 cut(s) | 1301 |
| Bsh1236I | CGCG | 3 cut(s) | 1146, 2446, 2524 |
| BshFI | GGCC | 3 cut(s) | 687, 1609, 1963 |
| BsiHKAI | GWGCWC | 1 cut(s) | 547 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1349, 2299 |
| BsiSI | CCGG | 1 cut(s) | 531 |
| BslFI | GGGAC | 3 cut(s) | 425, 1242, 1824 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 208, 1663, 1937, 2135, 2332, 2516 |
| BsmAI | GTCTC | 3 cut(s) | 159, 2177, 2262 |
| BsmFI | GGGAC | 3 cut(s) | 425, 1242, 1824 |
| BsmI | GAATGC | 1 cut(s) | 2397 |
| BsnI | GGCC | 3 cut(s) | 687, 1609, 1963 |
| Bso31I | GGTCTC | 2 cut(s) | 159, 2177 |
| BsoBI | CYCGRG | 2 cut(s) | 1349, 2299 |
| Bsp1286I | GDGCHC | 1 cut(s) | 547 |
| Bsp1407I | TGTACA | 2 cut(s) | 1244, 2529 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1341 |
| Bsp19I | CCATGG | 2 cut(s) | 1542, 1610 |
| BspANI | GGCC | 3 cut(s) | 687, 1609, 1963 |
| BspCNI | CTCAG | 6 cut(s) | 87, 150, 1201, 1354, 2353, 2998 |
| BspFNI | CGCG | 3 cut(s) | 1146, 2446, 2524 |
| BspHI | TCATGA | 1 cut(s) | 652 |
| BspLI | GGNNCC | 3 cut(s) | 485, 529, 2776 |
| BspMI | ACCTGC | 1 cut(s) | 3055 |
| BspOI | GCTAGC | 1 cut(s) | 1217 |
| BspPI | GGATC | 4 cut(s) | 1406, 2023, 2527, 2859 |
| BspTI | CTTAAG | 1 cut(s) | 2558 |
| BspTNI | GGTCTC | 2 cut(s) | 159, 2177 |
| BsrDI | GCAATG | 3 cut(s) | 2050, 3006, 3059 |
| BsrGI | TGTACA | 2 cut(s) | 1244, 2529 |
| BsrI | ACTGG | 5 cut(s) | 150, 401, 421, 1171, 2775 |
| BssECI | CCNNGG | 3 cut(s) | 1542, 1610, 2576 |
| BssHII | GCGCGC | 1 cut(s) | 1144 |
| BssNAI | GTATAC | 1 cut(s) | 393 |
| BssSI | CACGAG | 2 cut(s) | 505, 2019 |
| BssT1I | CCWWGG | 3 cut(s) | 1542, 1610, 2576 |
| Bst1107I | GTATAC | 1 cut(s) | 393 |
| Bst2BI | CACGAG | 2 cut(s) | 505, 2019 |
| Bst6I | CTCTTC | 3 cut(s) | 580, 1920, 1944 |
| BstAFI | CTTAAG | 1 cut(s) | 2558 |
| BstAUI | TGTACA | 2 cut(s) | 1244, 2529 |
| BstBAI | YACGTR | 1 cut(s) | 1055 |
| BstC8I | GCNNGC | 9 cut(s) | 612, 756, 1146, 1215, 2112, 2309, 2313, 2317, 2478 |
| BstDEI | CTNAG | 8 cut(s) | 74, 116, 158, 1209, 1341, 2361, 2834, 3006 |
| BstDSI | CCRYGG | 2 cut(s) | 1542, 1610 |
| BstF5I | GGATG | 8 cut(s) | 93, 198, 286, 426, 539, 1360, 1514, 2222 |
| BstFNI | CGCG | 3 cut(s) | 1146, 2446, 2524 |
| BstHHI | GCGC | 7 cut(s) | 1052, 1095, 1146, 1148, 2526, 2614, 2742 |
| BstMAI | GTCTC | 3 cut(s) | 159, 2177, 2262 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 607, 1154, 1547, 2467, 2990 |
| BstNSI | RCATGY | 3 cut(s) | 949, 1443, 2114 |
| BstSFI | CTRYAG | 4 cut(s) | 354, 576, 642, 1785 |
| BstUI | CGCG | 3 cut(s) | 1146, 2446, 2524 |
| BstV1I | GCAGC | 3 cut(s) | 1012, 1169, 2470 |
| BstX2I | RGATCY | 3 cut(s) | 1476, 2015, 2864 |
| BstYI | RGATCY | 3 cut(s) | 1476, 2015, 2864 |
| BstZ17I | GTATAC | 1 cut(s) | 393 |
| BsuI | GTATCC | 1 cut(s) | 1231 |
| BsuRI | GGCC | 3 cut(s) | 687, 1609, 1963 |
| BtgI | CCRYGG | 2 cut(s) | 1542, 1610 |
| BtsCI | GGATG | 8 cut(s) | 93, 198, 286, 426, 539, 1360, 1514, 2222 |
| BtsI | GCAGTG | 2 cut(s) | 102, 765 |
| BtsIMutI | CAGTG | 9 cut(s) | 11, 102, 414, 756, 765, 852, 1164, 1272, 2851 |
| BveI | ACCTGC | 1 cut(s) | 3055 |
| Cac8I | GCNNGC | 9 cut(s) | 612, 756, 1146, 1215, 2112, 2309, 2313, 2317, 2478 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1208 |
| CciI | TCATGA | 1 cut(s) | 652 |
| CfoI | GCGC | 7 cut(s) | 1052, 1095, 1146, 1148, 2526, 2614, 2742 |
| Cfr13I | GGNCC | 1 cut(s) | 1252 |
| CseI | GACGC | 1 cut(s) | 1826 |
| Csp6I | GTAC | 6 cut(s) | 195, 850, 902, 1245, 2027, 2530 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 490, 525, 1675, 1710 |
| CviQI | GTAC | 6 cut(s) | 195, 850, 902, 1245, 2027, 2530 |
| DdeI | CTNAG | 8 cut(s) | 74, 116, 158, 1209, 1341, 2361, 2834, 3006 |
| EaeI | YGGCCR | 3 cut(s) | 685, 1607, 1961 |
| Eam1104I | CTCTTC | 3 cut(s) | 580, 1920, 1944 |
| EarI | CTCTTC | 3 cut(s) | 580, 1920, 1944 |
| Ecl136II | GAGCTC | 1 cut(s) | 545 |
| Eco130I | CCWWGG | 3 cut(s) | 1542, 1610, 2576 |
| Eco24I | GRGCYC | 1 cut(s) | 547 |
| Eco31I | GGTCTC | 2 cut(s) | 159, 2177 |
| Eco47I | GGWCC | 1 cut(s) | 1252 |
| Eco53kI | GAGCTC | 1 cut(s) | 545 |
| Eco57I | CTGAAG | 5 cut(s) | 663, 1882, 1901, 2371, 2708 |
| Eco88I | CYCGRG | 2 cut(s) | 1349, 2299 |
| EcoICRI | GAGCTC | 1 cut(s) | 545 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1252 |
| EcoRI | GAATTC | 2 cut(s) | 1328, 1725 |
| EcoT14I | CCWWGG | 3 cut(s) | 1542, 1610, 2576 |
| EcoT38I | GRGCYC | 1 cut(s) | 547 |
| ErhI | CCWWGG | 3 cut(s) | 1542, 1610, 2576 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1299, 1331 |
| FaqI | GGGAC | 3 cut(s) | 425, 1242, 1824 |
| FbaI | TGATCA | 4 cut(s) | 3, 628, 2815, 2839 |
| FblI | GTMKAC | 4 cut(s) | 392, 579, 942, 2598 |
| Fnu4HI | GCNGC | 3 cut(s) | 1026, 1158, 2459 |
| FokI | GGATG | 8 cut(s) | 80, 185, 293, 433, 546, 1367, 1501, 2209 |
| FriOI | GRGCYC | 1 cut(s) | 547 |
| Fsp4HI | GCNGC | 3 cut(s) | 1026, 1158, 2459 |
| FspAI | RTGCGCAY | 1 cut(s) | 1051 |
| FspI | TGCGCA | 2 cut(s) | 1051, 2741 |
| GlaI | GCGC | 7 cut(s) | 1051, 1094, 1145, 1147, 2525, 2613, 2741 |
| GluI | GCNGC | 3 cut(s) | 1026, 1158, 2459 |
| GsaI | CCCAGC | 1 cut(s) | 1305 |
| HaeIII | GGCC | 3 cut(s) | 687, 1609, 1963 |
| HapII | CCGG | 1 cut(s) | 531 |
| HgaI | GACGC | 1 cut(s) | 1826 |
| HhaI | GCGC | 7 cut(s) | 1052, 1095, 1146, 1148, 2526, 2614, 2742 |
| Hin6I | GCGC | 7 cut(s) | 1050, 1093, 1144, 1146, 2524, 2612, 2740 |
| HinP1I | GCGC | 7 cut(s) | 1050, 1093, 1144, 1146, 2524, 2612, 2740 |
| HincII | GTYRAC | 2 cut(s) | 135, 2338 |
| HindII | GTYRAC | 2 cut(s) | 135, 2338 |
| HindIII | AAGCTT | 2 cut(s) | 2305, 2474 |
| HinfI | GANTC | 9 cut(s) | 449, 763, 798, 885, 1205, 1812, 1826, 2237, 2255 |
| HpaII | CCGG | 1 cut(s) | 531 |
| HphI | GGTGA | 7 cut(s) | 659, 1466, 1892, 1952, 1992, 2077, 2672 |
| HpyAV | CCTTC | 7 cut(s) | 1064, 1514, 1667, 1790, 2006, 2007, 2938 |
| HpyCH4IV | ACGT | 1 cut(s) | 1054 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 607, 1154, 1547, 2467, 2990 |
| HpyF3I | CTNAG | 8 cut(s) | 74, 116, 158, 1209, 1341, 2361, 2834, 3006 |
| HpySE526I | ACGT | 1 cut(s) | 1054 |
| HspAI | GCGC | 7 cut(s) | 1050, 1093, 1144, 1146, 2524, 2612, 2740 |
| Ksp22I | TGATCA | 4 cut(s) | 3, 628, 2815, 2839 |
| LmnI | GCTCC | 3 cut(s) | 542, 1350, 2774 |
| Lsp1109I | GCAGC | 3 cut(s) | 1012, 1169, 2470 |
| LweI | GCATC | 3 cut(s) | 102, 1183, 2892 |
| MaeII | ACGT | 1 cut(s) | 1054 |
| MaeIII | GTNAC | 7 cut(s) | 262, 745, 821, 1418, 1771, 2095, 2567 |
| MfeI | CAATTG | 2 cut(s) | 243, 3092 |
| MflI | RGATCY | 3 cut(s) | 1476, 2015, 2864 |
| MhlI | GDGCHC | 1 cut(s) | 547 |
| MlsI | TGGCCA | 3 cut(s) | 687, 1609, 1963 |
| MluNI | TGGCCA | 3 cut(s) | 687, 1609, 1963 |
| MlyI | GAGTC | 2 cut(s) | 1806, 2264 |
| MmeI | TCCRAC | 6 cut(s) | 253, 511, 862, 938, 2153, 2250 |
| Mox20I | TGGCCA | 3 cut(s) | 687, 1609, 1963 |
| MscI | TGGCCA | 3 cut(s) | 687, 1609, 1963 |
| MseI | TTAA | 8 cut(s) | 125, 140, 497, 636, 921, 2546, 2559, 2987 |
| MslI | CAYNNNNRTG | 2 cut(s) | 419, 1191 |
| Msp20I | TGGCCA | 3 cut(s) | 687, 1609, 1963 |
| MspCI | CTTAAG | 1 cut(s) | 2558 |
| MspI | CCGG | 1 cut(s) | 531 |
| MunI | CAATTG | 2 cut(s) | 243, 3092 |
| Mva1269I | GAATGC | 1 cut(s) | 2397 |
| MvnI | CGCG | 3 cut(s) | 1146, 2446, 2524 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 607, 1154, 1547, 2467, 2990 |
| NcoI | CCATGG | 2 cut(s) | 1542, 1610 |
| NheI | GCTAGC | 1 cut(s) | 1213 |
| NlaIV | GGNNCC | 3 cut(s) | 485, 529, 2776 |
| NmuCI | GTSAC | 2 cut(s) | 821, 1418 |
| NsbI | TGCGCA | 2 cut(s) | 1051, 2741 |
| NspI | RCATGY | 3 cut(s) | 949, 1443, 2114 |
| PaeI | GCATGC | 1 cut(s) | 2114 |
| PaeR7I | CTCGAG | 2 cut(s) | 1349, 2299 |
| PagI | TCATGA | 1 cut(s) | 652 |
| PaqCI | CACCTGC | 1 cut(s) | 3055 |
| PauI | GCGCGC | 1 cut(s) | 1144 |
| PciI | ACATGT | 2 cut(s) | 945, 1439 |
| PctI | GAATGC | 1 cut(s) | 2397 |
| PfeI | GAWTC | 7 cut(s) | 449, 763, 798, 885, 1205, 1826, 2237 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2516 |
| PkrI | GCNGC | 3 cut(s) | 1027, 1159, 2460 |
| PleI | GAGTC | 2 cut(s) | 1806, 2263 |
| PpsI | GAGTC | 2 cut(s) | 1806, 2263 |
| Ppu21I | YACGTR | 1 cut(s) | 1055 |
| PpuMI | RGGWCCY | 1 cut(s) | 1252 |
| PscI | ACATGT | 2 cut(s) | 945, 1439 |
| PshBI | ATTAAT | 1 cut(s) | 2546 |
| PsiI | TTATAA | 1 cut(s) | 2036 |
| Psp124BI | GAGCTC | 1 cut(s) | 547 |
| Psp5II | RGGWCCY | 1 cut(s) | 1252 |
| PspFI | CCCAGC | 1 cut(s) | 1301 |
| PspN4I | GGNNCC | 3 cut(s) | 485, 529, 2776 |
| PspPI | GGNCC | 1 cut(s) | 1252 |
| PspPPI | RGGWCCY | 1 cut(s) | 1252 |
| PspXI | VCTCGAGB | 1 cut(s) | 1349 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1208 |
| PsuI | RGATCY | 3 cut(s) | 1476, 2015, 2864 |
| PteI | GCGCGC | 1 cut(s) | 1144 |
| RsaI | GTAC | 6 cut(s) | 196, 851, 903, 1246, 2028, 2531 |
| RsaNI | GTAC | 6 cut(s) | 195, 850, 902, 1245, 2027, 2530 |
| RseI | CAYNNNNRTG | 2 cut(s) | 419, 1191 |
| SacI | GAGCTC | 1 cut(s) | 547 |
| SaqAI | TTAA | 8 cut(s) | 125, 140, 497, 636, 921, 2546, 2559, 2987 |
| SatI | GCNGC | 3 cut(s) | 1026, 1158, 2459 |
| Sau96I | GGNCC | 1 cut(s) | 1252 |
| SchI | GAGTC | 2 cut(s) | 1806, 2264 |
| SduI | GDGCHC | 1 cut(s) | 547 |
| SfaNI | GCATC | 3 cut(s) | 102, 1183, 2892 |
| SfcI | CTRYAG | 4 cut(s) | 354, 576, 642, 1785 |
| Sfr274I | CTCGAG | 2 cut(s) | 1349, 2299 |
| SinI | GGWCC | 1 cut(s) | 1252 |
| SlaI | CTCGAG | 2 cut(s) | 1349, 2299 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 419, 1191 |
| SmlI | CTYRAG | 5 cut(s) | 872, 1349, 2299, 2558, 2604 |
| SmoI | CTYRAG | 5 cut(s) | 872, 1349, 2299, 2558, 2604 |
| SpeI | ACTAGT | 1 cut(s) | 2750 |
| SphI | GCATGC | 1 cut(s) | 2114 |
| SspI | AATATT | 2 cut(s) | 445, 1958 |
| SstI | GAGCTC | 1 cut(s) | 547 |
| StyI | CCWWGG | 3 cut(s) | 1542, 1610, 2576 |
| TaiI | ACGT | 1 cut(s) | 1057 |
| TaqI | TCGA | 9 cut(s) | 39, 239, 328, 1350, 1707, 1969, 2300, 2583, 2721 |
| TatI | WGTACW | 5 cut(s) | 849, 901, 1244, 2026, 2529 |
| TfiI | GAWTC | 7 cut(s) | 449, 763, 798, 885, 1205, 1826, 2237 |
| Tru1I | TTAA | 8 cut(s) | 125, 140, 497, 636, 921, 2546, 2559, 2987 |
| Tru9I | TTAA | 8 cut(s) | 125, 140, 497, 636, 921, 2546, 2559, 2987 |
| TscAI | CASTG | 9 cut(s) | 18, 109, 421, 756, 765, 859, 1171, 1279, 2851 |
| TseFI | GTSAC | 2 cut(s) | 821, 1418 |
| TseI | GCWGC | 3 cut(s) | 1025, 1157, 2458 |
| Tsp45I | GTSAC | 2 cut(s) | 821, 1418 |
| TspGWI | ACGGA | 3 cut(s) | 120, 293, 597 |
| TspRI | CASTG | 9 cut(s) | 18, 109, 421, 756, 765, 859, 1171, 1279, 2851 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2516 |
| Vha464I | CTTAAG | 1 cut(s) | 2558 |
| VpaK11BI | GGWCC | 1 cut(s) | 1252 |
| VspI | ATTAAT | 1 cut(s) | 2546 |
| XapI | RAATTY | 4 cut(s) | 85, 1328, 1725, 1745 |
| XceI | RCATGY | 3 cut(s) | 949, 1443, 2114 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 477 |
| XhoI | CTCGAG | 2 cut(s) | 1349, 2299 |
| XmiI | GTMKAC | 4 cut(s) | 392, 579, 942, 2598 |