Rroxscaffold_7G00158090

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0015555
Physical Location & Seq
Reverse (-)
1657631 .. 1659616
1986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00158090.1

Sequence Viewer

Length: 1986 bp
ATGATGCGAAACCAGAATCTCCTCTCTACCTTCTTCTTCACACTCTTCTTCTTCTCTCTTTCTCTCTCCAACCGAAGCCCAGAAGATAAAGCCGCCTTGCTCGCATTCAAAGCCTCCTCTGACCGCTCCAACTCCCTCGCCTCCTGGGCCGAATCCACCGACCCCTGCGACGGGTCATGGCTCGGCGTCACGTGCAACCCGAAGACCCGTCGGGTCACCAAGCTCGTGCTCGAGAATCTCAACCTCACCGGTTCGATTCAGCCACTCACCGGGCTCGACCGCCTCACCGTCCTCAGCCTCAACCAAAACCTCCTCTCCTCCTCCCTTAACCTCTCCTCCTGGCTCCACCTCAACCACCTCTACCTCTCTCACAATAACCTCACCGGAGCCATCCCCGCCGGAATTTCCCGCCTCCGCCACCTCCGCCGACTCGACCTCTCCCACAACCAACTCTCTGGCGAAATACCGGTCACCGAGCTGACTCGGTTGTCGAAGCTGTTAACTCTGAGGCTCGAGTCCAACTCGCTCACCGGTTTCGGTGGCTCGCCTCCCGACGCGTCCTCTGCTCCGTTTACGGATTTCAATGTGTCCAACAACGAACTCGCCGGGAAGATTCCTCCTCTCTTTCTGGAGAAGTTCGGTGCGGCGTCGTTTTTGGGAAACAAGCAGCTCTGCGGGAAGCCGCTGCCGCACGATTGCCCCGATCCGACGGCCGTTAAGCCGCCGTCCCTACCACCGACCGAACCCGAAGCCAAGCCGCACTCGAAACGCGCTGTTCTGATCAGCGTCAGCCTCATGCTTGGGTTTCTGGTTATCGCCGGCGCCGTCACGCGGTGGCGGCAGAGGAAGAGGAGCAATGTTGTTGTTGTCGTCGGCGGCGGGAACCCCAAGGTGGCCAACGGATACAGTTACGTGAAAAGGCACTACGGGTCCAGGGAGTTAAAGAGCGGCGGGTCCCACAGAAACGGTTATGGGCCGCGTGGGCCTAACGGGTCCGTAAGTGGCGGGCCCATGGAAAGCGAGGAGATGGTGGTGCTCGAGGGATGCCACCCTGGTGTTGGTAAGGTGGGCGATCTGCTGAGGGCGTCGGCAGAGATGCTCGGAAAGGGAAGCGTGGGGGCCACTTACAAGATCATGATGAACGGCCAAGATGACATGGTGGCGGTGAAGAGGGTGAGGGAGAGGAGAGTTCACGGCAAGGAAGTGGAAGCGTGGTTGAGAATTGTCGGCGAATTGAAACACTCGAACATTGTGAGCCTGAGAGCCTACCACAACTCCAACTACGAGCTTCTTTTGGTGTATGATTTTCTGCCTAACGGAAGCCTACATTCTCTGTTGCACGGGTTTAGAGGACCGGGGAGGACACCGTTGGATTGGGGTACAAGACTGAAACTAGCTTGGGGCTGTGCACAAGGACTTGCTTTCATCCACGGGTGTGACAAAGGCAAGCTCTATCACGGACACGTTAACTCGTCCAACATTTTAATCGATCACATGGGGAATGCTTGTGTTGCTGACAATGGCCTCCAACAGCTCTTGGTTGCTCAAAGTTCGTCCTACAATGCCTACAAAGCCCCGGAGTTGATCATGTCGAGTAGTTTTAGTCCTAACAAGTACACTCGCAAGTGCGATGTGTATAGCTTTGGGGTGGTTTTGATGGAGATTTTGACGGGGAGGATGGCGGGCGAGGAAGGAGAAATGAGCTTGGTGGAGTGGGTTAACAGGGCCGTGAAGAAAGAGTGTAGTACATGGGAACTTTTTGATTTCGAGCTGTTGAGTGACAAGGAGATGGAGGAGGAAATGTGGGCGCTTTTGCAAGTGGCATTGCTTTGCGCAGCCCCACAGCCTAAAGATCGTCCGACGATGAACATGGTGCGCAATATGATCGAGGACATTAGGAACAAGGGTGTTAGAGAAGATGGGACCAAGTCTATTCTAGATGACATTTCGTTTGATACTTCTTCTCCTTCACAAAGCACTCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

661

Amino Acids

72.53

Weight (kDa)

8.87

Isoelectric Point (pI)

41.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 66 7e-12 Leucine rich repeat N-terminal domain
LRR_8 PF13855 113 - 151 3.1e-07 Leucine rich repeat
LRR_4 PF12799 116 - 151 7.5e-06 Leucine Rich repeats (2 copies)
Pkinase PF00069 365 - 626 3.9e-29 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 365 - 627 1.4e-26 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015555)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g31790
malus_domestica MD15G1058800.v1.1
prunus_persica Prupe.1G411300_v2.0.a1
pyrus_communis pycom08g05190 pycom15g05520
rosa_chinensis RchiOBHm_Chr6g0311031
rosa_laevigata RLG00000010441
rosa_multiflora Rmu_sc0012235.1_g000006 Rmu_sc0014619.1_g000002
rosa_roxburghii Rroxscaffold_7G00158090
rosa_rugosa Rorug06G0384900
rosa_samantha Rh6AG498700 Rh6BG509300 Rh6CG515100 Rh6DG501700
rosa_wichuraiana Rw6G043430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 487
Acc16I TGCGCA 2 cut(s) 1834, 1877
AccB1I GGYRCC 1 cut(s) 821
AccBSI CCGCTC 2 cut(s) 126, 948
AccII CGCG 4 cut(s) 557, 771, 832, 979
AclWI GGATC 1 cut(s) 698
AcoI YGGCCR 3 cut(s) 711, 894, 1144
AcsI RAATTY 1 cut(s) 402
AcvI CACGTG 1 cut(s) 192
AcyI GRCGYC 4 cut(s) 186, 647, 822, 1085
AdeI CACNNNGTG 1 cut(s) 834
AfaI GTAC 3 cut(s) 1381, 1616, 1747
AfiI CCNNNNNNNGG 6 cut(s) 170, 171, 269, 831, 892, 1058
AflIII ACRYGT 2 cut(s) 555, 1462
AgeI ACCGGT 3 cut(s) 248, 466, 530
AgsI TTSAA 3 cut(s) 109, 583, 1237
AjnI CCWGG 4 cut(s) 143, 338, 932, 1051
AleI CACNNNNGTG 2 cut(s) 1053, 1434
Alw21I GWGCWC 3 cut(s) 231, 1038, 1411
Alw44I GTGCAC 1 cut(s) 1407
AlwI GGATC 1 cut(s) 698
Ama87I CYCGRG 3 cut(s) 230, 512, 1037
ApaI GGGCCC 1 cut(s) 1011
ApaLI GTGCAC 1 cut(s) 1407
ApeKI GCWGC 3 cut(s) 667, 685, 1835
ApoI RAATTY 1 cut(s) 402
ArsI GACNNNNNNTTYG 4 cut(s) 453, 485, 1934, 1966
AsiGI ACCGGT 3 cut(s) 248, 466, 530
AspLEI GCGC 5 cut(s) 773, 824, 1810, 1835, 1878
AsuC2I CCSGG 4 cut(s) 271, 607, 1356, 1577
AsuHPI GGTGA 9 cut(s) 208, 238, 259, 277, 373, 463, 520, 1177, 1186
AvaI CYCGRG 3 cut(s) 230, 512, 1037
AvaII GGWCC 5 cut(s) 930, 954, 993, 1352, 1923
BaeGI GKGCMC 2 cut(s) 1011, 1411
BalI TGGCCA 1 cut(s) 896
BanI GGYRCC 1 cut(s) 821
BanII GRGCYC 2 cut(s) 276, 1011
BauI CACGAG 1 cut(s) 224
BbrPI CACGTG 1 cut(s) 192
BbsI GAAGAC 1 cut(s) 209
Bbv12I GWGCWC 3 cut(s) 231, 1038, 1411
BbvCI CCTCAGC 2 cut(s) 293, 1079
BbvI GCAGC 3 cut(s) 672, 679, 1847
BccI CCATC 6 cut(s) 398, 1021, 1651, 1672, 1783, 1913
BceAI ACGGC 7 cut(s) 698, 709, 726, 809, 1159, 1210, 1712
BcgI CGANNNNNNTGC 2 cut(s) 1867, 1901
BciT130I CCWGG 4 cut(s) 145, 340, 934, 1053
BciVI GTATCC 1 cut(s) 896
BclI TGATCA 2 cut(s) 780, 1584
BcnI CCSGG 4 cut(s) 271, 607, 1356, 1577
BfaI CTAG 2 cut(s) 1394, 1937
BfoI RGCGCY 2 cut(s) 825, 1811
BfuI GTATCC 1 cut(s) 896
BglI GCCNNNNNGGC 2 cut(s) 146, 982
Bme1390I CCNGG 8 cut(s) 145, 271, 340, 607, 934, 1053, 1356, 1577
Bme18I GGWCC 5 cut(s) 930, 954, 993, 1352, 1923
BmeT110I CYCGRG 3 cut(s) 230, 512, 1037
BmrFI CCNGG 8 cut(s) 145, 271, 340, 607, 934, 1053, 1356, 1577
BmsI GCATC 2 cut(s) 1034, 1086
BpiI GAAGAC 1 cut(s) 209
BplI GAGNNNNNCTC 2 cut(s) 506, 538
BpmI CTGGAG 1 cut(s) 650
Bpu10I CCTNAGC 2 cut(s) 293, 1079
BpuMI CCSGG 4 cut(s) 271, 607, 1356, 1577
Bsa29I ATCGAT 1 cut(s) 1488
BsaAI YACGTR 2 cut(s) 192, 913
BsaHI GRCGYC 4 cut(s) 186, 647, 822, 1085
BsaJI CCNNGG 8 cut(s) 144, 888, 933, 1011, 1051, 1355, 1429, 1575
BsaWI WCCGGW 4 cut(s) 248, 383, 466, 530
Bsc4I CCNNNNNNNGG 6 cut(s) 170, 171, 269, 831, 892, 1058
Bse118I RCCGGY 4 cut(s) 248, 466, 530, 818
Bse3DI GCAATG 2 cut(s) 862, 1823
BseBI CCWGG 4 cut(s) 145, 340, 934, 1053
BseCI ATCGAT 1 cut(s) 1488
BseDI CCNNGG 8 cut(s) 144, 888, 933, 1011, 1051, 1355, 1429, 1575
BseGI GGATG 4 cut(s) 390, 1049, 1425, 1683
BseLI CCNNNNNNNGG 6 cut(s) 170, 171, 269, 831, 892, 1058
BseMI GCAATG 2 cut(s) 862, 1823
BseMII CTCAG 4 cut(s) 307, 497, 1070, 1250
BseSI GKGCMC 2 cut(s) 1011, 1411
BseX3I CGGCCG 1 cut(s) 711
BseXI GCAGC 3 cut(s) 672, 679, 1847
Bsh1236I CGCG 4 cut(s) 557, 771, 832, 979
Bsh1285I CGRYCG 3 cut(s) 280, 714, 741
BshNI GGYRCC 1 cut(s) 821
BshTI ACCGGT 3 cut(s) 248, 466, 530
BshVI ATCGAT 1 cut(s) 1488
BsiEI CGRYCG 3 cut(s) 280, 714, 741
BsiHKAI GWGCWC 3 cut(s) 231, 1038, 1411
BsiHKCI CYCGRG 3 cut(s) 230, 512, 1037
BslFI GGGAC 3 cut(s) 712, 940, 1936
BslI CCNNNNNNNGG 6 cut(s) 170, 171, 269, 831, 892, 1058
BsmFI GGGAC 3 cut(s) 712, 940, 1936
BsmI GAATGC 2 cut(s) 104, 1507
BsoBI CYCGRG 3 cut(s) 230, 512, 1037
Bsp120I GGGCCC 1 cut(s) 1007
Bsp1286I GDGCHC 5 cut(s) 231, 276, 1011, 1038, 1411
Bsp143I GATC 8 cut(s) 703, 780, 1072, 1131, 1489, 1584, 1852, 1884
Bsp19I CCATGG 1 cut(s) 1011
BspCNI CTCAG 4 cut(s) 306, 498, 1071, 1251
BspDI ATCGAT 1 cut(s) 1488
BspFNI CGCG 4 cut(s) 557, 771, 832, 979
BspHI TCATGA 1 cut(s) 1134
BspPI GGATC 1 cut(s) 698
BspT107I GGYRCC 1 cut(s) 821
BsrBI CCGCTC 2 cut(s) 126, 948
BsrDI GCAATG 2 cut(s) 862, 1823
BsrFI RCCGGY 4 cut(s) 248, 466, 530, 818
BssAI RCCGGY 4 cut(s) 248, 466, 530, 818
BssECI CCNNGG 8 cut(s) 144, 888, 933, 1011, 1051, 1355, 1429, 1575
BssMI GATC 8 cut(s) 703, 780, 1072, 1131, 1489, 1584, 1852, 1884
BssNI GRCGYC 4 cut(s) 186, 647, 822, 1085
BssSI CACGAG 1 cut(s) 224
BssT1I CCWWGG 2 cut(s) 888, 1011
Bst2BI CACGAG 1 cut(s) 224
Bst2UI CCWGG 4 cut(s) 145, 340, 934, 1053
Bst4CI ACNGT 4 cut(s) 289, 908, 968, 1368
Bst6I CTCTTC 3 cut(s) 50, 842, 1163
BstACI GRCGYC 4 cut(s) 186, 647, 822, 1085
BstBAI YACGTR 2 cut(s) 192, 913
BstC8I GCNNGC 6 cut(s) 102, 545, 820, 1007, 1448, 1684
BstDEI CTNAG 4 cut(s) 293, 506, 1079, 1259
BstDSI CCRYGG 2 cut(s) 1011, 1429
BstEII GGTNACC 2 cut(s) 214, 469
BstF5I GGATG 4 cut(s) 390, 1049, 1425, 1683
BstFNI CGCG 4 cut(s) 557, 771, 832, 979
BstH2I RGCGCY 2 cut(s) 825, 1811
BstHHI GCGC 5 cut(s) 773, 824, 1810, 1835, 1878
BstKTI GATC 8 cut(s) 706, 783, 1075, 1134, 1492, 1587, 1855, 1887
BstMBI GATC 8 cut(s) 703, 780, 1072, 1131, 1489, 1584, 1852, 1884
BstMCI CGRYCG 3 cut(s) 280, 714, 741
BstNI CCWGG 4 cut(s) 145, 340, 934, 1053
BstPI GGTNACC 2 cut(s) 214, 469
BstSCI CCNGG 8 cut(s) 143, 269, 338, 605, 932, 1051, 1354, 1575
BstSLI GKGCMC 2 cut(s) 1011, 1411
BstUI CGCG 4 cut(s) 557, 771, 832, 979
BstV1I GCAGC 3 cut(s) 672, 679, 1847
BstV2I GAAGAC 1 cut(s) 209
BstXI CCANNNNNNTGG 1 cut(s) 455
BstZI CGGCCG 1 cut(s) 711
Bsu15I ATCGAT 1 cut(s) 1488
BsuI GTATCC 1 cut(s) 896
BsuTUI ATCGAT 1 cut(s) 1488
BtgI CCRYGG 2 cut(s) 1011, 1429
BtgZI GCGATG 1 cut(s) 1644
BtsCI GGATG 4 cut(s) 390, 1049, 1425, 1683
Cac8I GCNNGC 6 cut(s) 102, 545, 820, 1007, 1448, 1684
CciI TCATGA 1 cut(s) 1134
CfoI GCGC 5 cut(s) 773, 824, 1810, 1835, 1878
Cfr10I RCCGGY 4 cut(s) 248, 466, 530, 818
ClaI ATCGAT 1 cut(s) 1488
CseI GACGC 6 cut(s) 175, 546, 563, 636, 775, 1074
Csp6I GTAC 3 cut(s) 1380, 1615, 1746
CspAI ACCGGT 3 cut(s) 248, 466, 530
CviAII CATG 9 cut(s) 177, 796, 1012, 1135, 1156, 1495, 1588, 1749, 1870
CviQI GTAC 3 cut(s) 1380, 1615, 1746
DdeI CTNAG 4 cut(s) 293, 506, 1079, 1259
DinI GGCGCC 1 cut(s) 823
DpnI GATC 8 cut(s) 705, 782, 1074, 1133, 1491, 1586, 1854, 1886
DpnII GATC 8 cut(s) 703, 780, 1072, 1131, 1489, 1584, 1852, 1884
DraIII CACNNNGTG 1 cut(s) 834
DrdI GACNNNNNNGTC 1 cut(s) 487
DseDI GACNNNNNNGTC 1 cut(s) 487
EaeI YGGCCR 3 cut(s) 711, 894, 1144
EagI CGGCCG 1 cut(s) 711
Eam1104I CTCTTC 3 cut(s) 50, 842, 1163
EarI CTCTTC 3 cut(s) 50, 842, 1163
EciI GGCGGA 2 cut(s) 404, 413
EclXI CGGCCG 1 cut(s) 711
Eco130I CCWWGG 2 cut(s) 888, 1011
Eco24I GRGCYC 2 cut(s) 276, 1011
Eco47I GGWCC 5 cut(s) 930, 954, 993, 1352, 1923
Eco52I CGGCCG 1 cut(s) 711
Eco72I CACGTG 1 cut(s) 192
Eco88I CYCGRG 3 cut(s) 230, 512, 1037
Eco91I GGTNACC 2 cut(s) 214, 469
EcoO109I RGGNCCY 1 cut(s) 954
EcoO65I GGTNACC 2 cut(s) 214, 469
EcoRII CCWGG 4 cut(s) 143, 338, 932, 1051
EcoT14I CCWWGG 2 cut(s) 888, 1011
EcoT38I GRGCYC 2 cut(s) 276, 1011
EgeI GGCGCC 1 cut(s) 823
EheI GGCGCC 1 cut(s) 823
ErhI CCWWGG 2 cut(s) 888, 1011
FaeI CATG 9 cut(s) 180, 799, 1015, 1138, 1159, 1498, 1591, 1752, 1873
FaqI GGGAC 3 cut(s) 712, 940, 1936
FatI CATG 9 cut(s) 176, 795, 1011, 1134, 1155, 1494, 1587, 1748, 1869
FauI CCCGC 7 cut(s) 403, 416, 668, 872, 944, 998, 1675
FbaI TGATCA 2 cut(s) 780, 1584
FokI GGATG 4 cut(s) 377, 1056, 1412, 1690
FriOI GRGCYC 2 cut(s) 276, 1011
FspBI CTAG 2 cut(s) 1394, 1937
FspI TGCGCA 2 cut(s) 1834, 1877
GlaI GCGC 5 cut(s) 772, 823, 1809, 1834, 1877
GsuI CTGGAG 1 cut(s) 650
HaeII RGCGCY 2 cut(s) 825, 1811
HgaI GACGC 6 cut(s) 175, 546, 563, 636, 775, 1074
HhaI GCGC 5 cut(s) 773, 824, 1810, 1835, 1878
Hin1I GRCGYC 4 cut(s) 186, 647, 822, 1085
Hin1II CATG 9 cut(s) 180, 799, 1015, 1138, 1159, 1498, 1591, 1752, 1873
Hin6I GCGC 5 cut(s) 771, 822, 1808, 1833, 1876
HinP1I GCGC 5 cut(s) 771, 822, 1808, 1833, 1876
HincII GTYRAC 3 cut(s) 501, 1468, 1720
HindII GTYRAC 3 cut(s) 501, 1468, 1720
HinfI GANTC 8 cut(s) 16, 152, 235, 256, 429, 481, 515, 613
HpaI GTTAAC 3 cut(s) 501, 1468, 1720
HphI GGTGA 9 cut(s) 208, 238, 259, 277, 373, 463, 520, 1177, 1186
Hpy166II GTNNAC 7 cut(s) 501, 573, 1192, 1409, 1468, 1617, 1720
Hpy188I TCNGA 6 cut(s) 121, 507, 708, 780, 1103, 1860
Hpy188III TCNNGA 5 cut(s) 232, 551, 629, 1135, 1937
Hpy8I GTNNAC 7 cut(s) 501, 573, 1192, 1409, 1468, 1617, 1720
Hpy99I CGWCG 8 cut(s) 173, 213, 557, 652, 712, 875, 1090, 1864
HpyAV CCTTC 3 cut(s) 40, 1685, 1977
HpyCH4III ACNGT 4 cut(s) 289, 908, 968, 1368
HpyCH4IV ACGT 3 cut(s) 191, 912, 1464
HpyCH4V TGCA 4 cut(s) 195, 1339, 1409, 1816
HpyF3I CTNAG 4 cut(s) 293, 506, 1079, 1259
HpySE526I ACGT 3 cut(s) 191, 912, 1464
Hsp92I GRCGYC 4 cut(s) 186, 647, 822, 1085
Hsp92II CATG 9 cut(s) 180, 799, 1015, 1138, 1159, 1498, 1591, 1752, 1873
HspAI GCGC 5 cut(s) 771, 822, 1808, 1833, 1876
KasI GGCGCC 1 cut(s) 821
KflI GGGWCCC 1 cut(s) 954
KroI GCCGGC 1 cut(s) 818
KroNI GCCGGC 1 cut(s) 820
Ksp22I TGATCA 2 cut(s) 780, 1584
KspAI GTTAAC 3 cut(s) 501, 1468, 1720
Kzo9I GATC 8 cut(s) 703, 780, 1072, 1131, 1489, 1584, 1852, 1884
LmnI GCTCC 5 cut(s) 131, 348, 386, 571, 852
Lsp1109I GCAGC 3 cut(s) 672, 679, 1847
LweI GCATC 2 cut(s) 1034, 1086
MaeI CTAG 2 cut(s) 1394, 1937
MaeII ACGT 3 cut(s) 191, 912, 1464
MaeIII GTNAC 7 cut(s) 187, 214, 469, 826, 908, 1436, 1778
MalI GATC 8 cut(s) 705, 782, 1074, 1133, 1491, 1586, 1854, 1886
MbiI CCGCTC 2 cut(s) 126, 948
MboI GATC 8 cut(s) 703, 780, 1072, 1131, 1489, 1584, 1852, 1884
MhlI GDGCHC 5 cut(s) 231, 276, 1011, 1038, 1411
MlsI TGGCCA 1 cut(s) 896
MluCI AATT 3 cut(s) 402, 1221, 1232
MluI ACGCGT 1 cut(s) 555
MluNI TGGCCA 1 cut(s) 896
Mly113I GGCGCC 1 cut(s) 822
MlyI GAGTC 3 cut(s) 423, 475, 524
Mox20I TGGCCA 1 cut(s) 896
MreI CGCCGGCG 1 cut(s) 818
MroNI GCCGGC 1 cut(s) 818
MscI TGGCCA 1 cut(s) 896
MseI TTAA 7 cut(s) 327, 500, 717, 941, 1467, 1484, 1719
MslI CAYNNNNRTG 2 cut(s) 1053, 1434
Msp20I TGGCCA 1 cut(s) 896
MspA1I CMGCKG 1 cut(s) 685
MspR9I CCNGG 8 cut(s) 145, 271, 340, 607, 934, 1053, 1356, 1577
Mva1269I GAATGC 2 cut(s) 104, 1507
MvaI CCWGG 4 cut(s) 145, 340, 934, 1053
MvnI CGCG 4 cut(s) 557, 771, 832, 979
NaeI GCCGGC 1 cut(s) 820
NarI GGCGCC 1 cut(s) 822
NciI CCSGG 4 cut(s) 271, 607, 1356, 1577
NcoI CCATGG 1 cut(s) 1011
NdeII GATC 8 cut(s) 703, 780, 1072, 1131, 1489, 1584, 1852, 1884
NgoMIV GCCGGC 1 cut(s) 818
NlaIII CATG 9 cut(s) 180, 799, 1015, 1138, 1159, 1498, 1591, 1752, 1873
NmeAIII GCCGAG 1 cut(s) 162
NmuCI GTSAC 6 cut(s) 187, 214, 469, 826, 1436, 1778
NsbI TGCGCA 2 cut(s) 1834, 1877
OliI CACNNNNGTG 2 cut(s) 1053, 1434
PaeR7I CTCGAG 3 cut(s) 230, 512, 1037
PagI TCATGA 1 cut(s) 1134
PcsI WCGNNNNNNNCGW 3 cut(s) 197, 699, 822
PctI GAATGC 2 cut(s) 104, 1507
PdiI GCCGGC 1 cut(s) 820
PfeI GAWTC 5 cut(s) 16, 152, 235, 256, 613
PflFI GACNNNGTC 1 cut(s) 1927
PinAI ACCGGT 3 cut(s) 248, 466, 530
PleI GAGTC 3 cut(s) 423, 475, 523
PluTI GGCGCC 1 cut(s) 825
PmaCI CACGTG 1 cut(s) 192
PmlI CACGTG 1 cut(s) 192
PpsI GAGTC 3 cut(s) 423, 475, 523
Ppu21I YACGTR 2 cut(s) 192, 913
PpuMI RGGWCCY 1 cut(s) 954
Psp5II RGGWCCY 1 cut(s) 954
Psp6I CCWGG 4 cut(s) 143, 338, 932, 1051
PspCI CACGTG 1 cut(s) 192
PspEI GGTNACC 2 cut(s) 214, 469
PspGI CCWGG 4 cut(s) 143, 338, 932, 1051
PspOMI GGGCCC 1 cut(s) 1007
PspPPI RGGWCCY 1 cut(s) 954
PspXI VCTCGAGB 2 cut(s) 512, 1037
PsyI GACNNNGTC 1 cut(s) 1927
RsaI GTAC 3 cut(s) 1381, 1616, 1747
RsaNI GTAC 3 cut(s) 1380, 1615, 1746
RseI CAYNNNNRTG 2 cut(s) 1053, 1434
SaqAI TTAA 7 cut(s) 327, 500, 717, 941, 1467, 1484, 1719
Sau3AI GATC 8 cut(s) 703, 780, 1072, 1131, 1489, 1584, 1852, 1884
SchI GAGTC 3 cut(s) 423, 475, 524
ScrFI CCNGG 8 cut(s) 145, 271, 340, 607, 934, 1053, 1356, 1577
SduI GDGCHC 5 cut(s) 231, 276, 1011, 1038, 1411
SfaNI GCATC 2 cut(s) 1034, 1086
SfiI GGCCNNNNNGGCC 1 cut(s) 982
SfoI GGCGCC 1 cut(s) 823
Sfr274I CTCGAG 3 cut(s) 230, 512, 1037
SgrAI CRCCGGYG 1 cut(s) 818
SinI GGWCC 5 cut(s) 930, 954, 993, 1352, 1923
SlaI CTCGAG 3 cut(s) 230, 512, 1037
SmiMI CAYNNNNRTG 2 cut(s) 1053, 1434
SmlI CTYRAG 3 cut(s) 230, 512, 1037
SmoI CTYRAG 3 cut(s) 230, 512, 1037
Sse9I AATT 3 cut(s) 402, 1221, 1232
SspDI GGCGCC 1 cut(s) 821
SspMI CTAG 2 cut(s) 1394, 1937
StyD4I CCNGG 8 cut(s) 143, 269, 338, 605, 932, 1051, 1354, 1575
StyI CCWWGG 2 cut(s) 888, 1011
TaaI ACNGT 4 cut(s) 289, 908, 968, 1368
TaiI ACGT 3 cut(s) 194, 915, 1467
TaqII GACCGA 1 cut(s) 755
TasI AATT 3 cut(s) 402, 1221, 1232
TatI WGTACW 2 cut(s) 1614, 1745
TfiI GAWTC 5 cut(s) 16, 152, 235, 256, 613
Tru1I TTAA 7 cut(s) 327, 500, 717, 941, 1467, 1484, 1719
Tru9I TTAA 7 cut(s) 327, 500, 717, 941, 1467, 1484, 1719
TseFI GTSAC 6 cut(s) 187, 214, 469, 826, 1436, 1778
TseI GCWGC 3 cut(s) 667, 685, 1835
Tsp45I GTSAC 6 cut(s) 187, 214, 469, 826, 1436, 1778
TspDTI ATGAA 3 cut(s) 1154, 1414, 1880
TspGWI ACGGA 6 cut(s) 558, 590, 915, 985, 1332, 1473
Tth111I GACNNNGTC 1 cut(s) 1927
VneI GTGCAC 1 cut(s) 1407
VpaK11BI GGWCC 5 cut(s) 930, 954, 993, 1352, 1923
XapI RAATTY 1 cut(s) 402
XbaI TCTAGA 1 cut(s) 1936
XcmI CCANNNNNNNNNTGG 1 cut(s) 1055
XhoI CTCGAG 3 cut(s) 230, 512, 1037
XspI CTAG 2 cut(s) 1394, 1937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.