Rroxscaffold_7G00163160

Exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0012363
Physical Location & Seq
Forward (+)
5518747 .. 5521870
3124 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00163160.1

Sequence Viewer

Length: 2052 bp
ATGGCGCATTCGGTGAGTGACAAGAGTATTCAGAATTTGATATCTGCAAGCAAGTCATTGAGGCTGAACTTACAGAAATCACAGGGGTTGGGGTTGGCTTTAGAGAAGGCAGGGTCCAGATTTGAAGAGATTAACCAGAGGTTACCGTCTCTTGAAGCTGCGGTTCGGCCCATTCGGGCTGATAAGGAGGCCCTTGCTGCTGTTGGAGGTCACATTAATCGCGCTGTTGGCCCGGCCGCAGCTGTGCTTAAAGTGTTTGATGCTGTTCATGGGCTCGAAAAGTCTCTATTATCGGATCCGAGGAGTGATCTTCCGGGGTACTTATCAGTGTTGAAGCGTCTGGAAGAGGCTTTGAAGTTTCTGGGTGACAATTGTGGGTTGGCGATTCAGTGGTTGGAGGGTATAGTAGAGTACCTGGAGGATAATGCAGTTGCAGATGAGCGGTATCTCTCGAATCTGAAGAAAAGTCTCATAGAATTGCAGAGTGATGAGGGAAAGGCTTATCTCGATGGGGGGCTTTTGGAGGCTGCGTTGGACAAGTTAGAAAATGAGTTCCGGCGGCTTCTTACAGAACATAGTGTGCCACTTCCAATGTCGTCGTCATCATCACTGGGAGAACAAGCCTGCATTGCGCCATCACCATTACCTGTTATGGTAATCCAGAAGTTGCAAGCTATTATTGGAAGAATGATTTCTAATAATAGACTTGAGAAGTGTATATCTATTTATGTTGAAGTTCGAAGTTCAAATGTAAGGGCAAGTTTACAAGCTCTGAATTTGGATTATCTTGAGATATCAATTGCGGAGTTTAATGATGTGCAAAGCATAGAGGGGTATATAGCCCAGTGGGGAAGGCATTTGGAGTTTGCAGTGAAACACTTGTTTGAGGCCGAGTATAAGCTGTGCAATGATGTCTTTGAAAGGATTGGATTGGACGTGTGGATGGGTTGTTTTGCGAAGATTGCAGCTCAGGCTGGTATCCTTGCATTCCTACAATTTGGGAAGACTGTTACAGACAGCAAGAAAGATCCGATAAAGCTTTTGAAGTTGTTGGATATATTTGCTTCTCTGAACAAGTTGAGACTTGATTTCAACCGGCTTTTTGGGGGAGGAGCATGTGTTGAAATCCAAAACCTGACAAGGGACCTTATTAAGAGTGTCATTGATGGAGCCGCTGAAATTTTTTGGGAACTTCTTCGTCAGGTGGAGTTGCAAAGGCACAACCCACCTCCTCCAGATGGGAGTGTTCCAAAATTGGTCAGTTTCATTACTGATTATTGTAATAAACTGCTTGGGGATGATTATAAGCCAATCTTAACTCAAGTTCTAATTATCCATCGAAGTTGGAAGCATGAAAAGTTTCAAGAGAAACTCCTTAATAATGAGGTTCTGGAAATTGCTAAAGCGATTGAGCAAAACTTGGAGGCTTGGATAAGGGCGTATGGCGATACCTCAAATGCATATGGCAATCCCTCCTTGGGGTACCTTTTTGCAATGAACAACCACTGGCATCTGTACAGGAGCCTAAAAGGAACTAAGCTGGGAGCTCTTCTGGGGGATCGCTGGTTAAGAGAACATGAAGACTCCAAGGGCTATTATGCCGAGTTATTCTTGAGAGAGAGCTGGGGGAAACTTCCTAGTCATCTGAGTAGAGAGGGTCTAATTCTCTTCTCAGGTGGTCGTGCGACTGCCCGTGATCTTGTCAAGAAGAGACTGAAAACTTTCAATGAAGCCTTTGATGAAATGTATAAGCGGCAGTCAAATTGGATTGTGTCAGATAAAGATTTAAGGGAGAAGACATGCCAGCTGATAGTGCAGGCAGTTGTGCCTGTTTACAGAAGCTACATGCAGAATTATGGTCCCTTGGTTGAGCAAGATGCGAGTTCAAGCAAGTATGCAAAGTATTCAGTGCAGACTTTGGAGAAAATGCTCATGTCTCTCTTTCAGCCAAAGCCTCTGAGATATGGCAGTTTCAAAGGTAGTAGGCAGCTGAGTGGAAACTTCAACAATGGAGTAAAAGATCTTCGACGTACTACCTCTGCAGCTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006887 GO:0008150 GO:0009987 GO:0016192 GO:0032940 GO:0046903 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Exo70

Protein Analysis

683

Amino Acids

76.77

Weight (kDa)

8.5

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 77 - 191 8e-15 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 282 - 645 1.7e-100 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31540
fragaria_vesca FvH4_2g36720 FvH4_2g36720
malus_domestica MD08G1127600.v1.1 MD15G1106900.v1.1
prunus_persica Prupe.1G459300_v2.0.a1
pyrus_communis pycom08g10620 pycom08g10630 pycom15g09770
rosa_chinensis RchiOBHm_Chr6g0305081
rosa_laevigata RLG00000010920
rosa_multiflora Rmu_sc0000061.1_g000027
rosa_roxburghii Rroxscaffold_7G00163160
rosa_rugosa Rorug06G0337200
rosa_samantha Rh6AG449000 Rh6BG452100 Rh6CG462700 Rh6DG449400
rosa_wichuraiana Rw6G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1305
Acc65I GGTACC 1 cut(s) 1482
AccB1I GGYRCC 1 cut(s) 1482
AccBSI CCGCTC 1 cut(s) 442
AccII CGCG 1 cut(s) 222
AciI CCGC 7 cut(s) 161, 237, 442, 559, 803, 1173, 1753
AclWI GGATC 4 cut(s) 290, 303, 1022, 1566
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 3 cut(s) 34, 775, 1179
AcuI CTGAAG 1 cut(s) 479
AfaI GTAC 5 cut(s) 320, 413, 1484, 1517, 2032
AfiI CCNNNNNNNGG 4 cut(s) 1141, 1238, 1478, 1479
AflIII ACRYGT 1 cut(s) 936
AjiI CACGTC 1 cut(s) 937
AjnI CCWGG 1 cut(s) 414
Alw21I GWGCWC 1 cut(s) 1549
Alw26I GTCTC 6 cut(s) 153, 288, 473, 1075, 1705, 1941
AlwI GGATC 4 cut(s) 290, 303, 1022, 1566
AoxI GGCC 5 cut(s) 167, 189, 229, 234, 888
ApeKI GCWGC 7 cut(s) 158, 197, 239, 527, 965, 1987, 2042
ApoI RAATTY 3 cut(s) 34, 775, 1179
AseI ATTAAT 1 cut(s) 216
Asp700I GAANNNNTTC 4 cut(s) 691, 1194, 1359, 1721
Asp718I GGTACC 1 cut(s) 1482
AspLEI GCGC 3 cut(s) 7, 224, 634
AspS9I GGNCC 6 cut(s) 114, 168, 190, 230, 1144, 1859
AsuC2I CCSGG 2 cut(s) 233, 315
AsuHPI GGTGA 3 cut(s) 25, 377, 630
AsuII TTCGAA 1 cut(s) 739
AvaII GGWCC 3 cut(s) 114, 1144, 1859
BamHI GGATCC 1 cut(s) 295
BanI GGYRCC 1 cut(s) 1482
BanII GRGCYC 2 cut(s) 276, 1549
BarI GAAGNNNNNNTAC 2 cut(s) 2007, 2039
BbsI GAAGAC 3 cut(s) 1010, 1587, 1802
Bbv12I GWGCWC 1 cut(s) 1549
BbvI GCAGC 6 cut(s) 145, 184, 251, 514, 977, 1999
BccI CCATC 6 cut(s) 503, 643, 937, 1160, 1232, 1344
BciT130I CCWGG 1 cut(s) 416
BciVI GTATCC 1 cut(s) 989
BcnI CCSGG 2 cut(s) 233, 315
BcoDI GTCTC 6 cut(s) 153, 288, 473, 1075, 1705, 1941
BfaI CTAG 1 cut(s) 1638
BfmI CTRYAG 1 cut(s) 2040
BfuI GTATCC 1 cut(s) 989
BglII AGATCT 1 cut(s) 2020
Bme1390I CCNGG 3 cut(s) 233, 315, 416
Bme18I GGWCC 3 cut(s) 114, 1144, 1859
BmgBI CACGTC 1 cut(s) 937
BmgT120I GGNCC 6 cut(s) 114, 168, 190, 230, 1144, 1859
BmiI GGNNCC 7 cut(s) 115, 297, 1145, 1171, 1484, 1523, 1861
BmrFI CCNGG 3 cut(s) 233, 315, 416
BmrI ACTGGG 2 cut(s) 620, 838
BmsI GCATC 3 cut(s) 250, 1519, 1867
BmuI ACTGGG 2 cut(s) 620, 838
BpiI GAAGAC 3 cut(s) 1010, 1587, 1802
BpmI CTGGAG 2 cut(s) 437, 1218
Bpu10I CCTNAGC 1 cut(s) 969
Bpu14I TTCGAA 1 cut(s) 739
BpuEI CTTGAG 4 cut(s) 728, 809, 1305, 1633
BpuMI CCSGG 2 cut(s) 233, 315
BsaJI CCNNGG 5 cut(s) 299, 314, 1476, 1587, 1863
BsaXI ACNNNNNCTCC 4 cut(s) 515, 545, 1104, 1134
Bsc4I CCNNNNNNNGG 4 cut(s) 1141, 1238, 1478, 1479
Bse118I RCCGGY 1 cut(s) 1095
Bse1I ACTGG 3 cut(s) 615, 844, 1511
Bse3DI GCAATG 3 cut(s) 627, 913, 1500
BseBI CCWGG 1 cut(s) 416
BseDI CCNNGG 5 cut(s) 299, 314, 1476, 1587, 1863
BseGI GGATG 2 cut(s) 948, 1303
BseLI CCNNNNNNNGG 4 cut(s) 1141, 1238, 1478, 1479
BseMI GCAATG 3 cut(s) 627, 913, 1500
BseMII CTCAG 5 cut(s) 983, 1637, 1686, 1949, 1982
BseNI ACTGG 3 cut(s) 615, 844, 1511
BseRI GAGGAG 3 cut(s) 316, 1125, 1221
BseX3I CGGCCG 1 cut(s) 234
BseXI GCAGC 6 cut(s) 145, 184, 251, 514, 977, 1999
BseYI CCCAGC 2 cut(s) 1540, 1623
BsgI GTGCAG 2 cut(s) 1835, 1931
Bsh1236I CGCG 1 cut(s) 222
Bsh1285I CGRYCG 1 cut(s) 237
BshFI GGCC 5 cut(s) 169, 191, 231, 236, 890
BshNI GGYRCC 1 cut(s) 1482
BsiEI CGRYCG 1 cut(s) 237
BsiHKAI GWGCWC 1 cut(s) 1549
BsiSI CCGG 4 cut(s) 233, 314, 556, 1096
BslFI GGGAC 2 cut(s) 1157, 1845
BslI CCNNNNNNNGG 4 cut(s) 1141, 1238, 1478, 1479
BsmAI GTCTC 6 cut(s) 153, 288, 473, 1075, 1705, 1941
BsmBI CGTCTC 1 cut(s) 153
BsmFI GGGAC 2 cut(s) 1157, 1845
BsmI GAATGC 2 cut(s) 7, 986
BsnI GGCC 5 cut(s) 169, 191, 231, 236, 890
Bsp119I TTCGAA 1 cut(s) 739
Bsp1286I GDGCHC 2 cut(s) 276, 1549
Bsp1407I TGTACA 1 cut(s) 1515
Bsp143I GATC 6 cut(s) 295, 307, 1027, 1558, 1696, 2020
BspACI CCGC 7 cut(s) 161, 237, 442, 559, 803, 1173, 1753
BspANI GGCC 5 cut(s) 169, 191, 231, 236, 890
BspCNI CTCAG 5 cut(s) 982, 1638, 1685, 1950, 1983
BspFNI CGCG 1 cut(s) 222
BspLI GGNNCC 7 cut(s) 115, 297, 1145, 1171, 1484, 1523, 1861
BspMAI CTGCAG 1 cut(s) 2044
BspPI GGATC 4 cut(s) 290, 303, 1022, 1566
BspQI GCTCTTC 1 cut(s) 1554
BspT104I TTCGAA 1 cut(s) 739
BspT107I GGYRCC 1 cut(s) 1482
BsrBI CCGCTC 1 cut(s) 442
BsrDI GCAATG 3 cut(s) 627, 913, 1500
BsrFI RCCGGY 1 cut(s) 1095
BsrGI TGTACA 1 cut(s) 1515
BsrI ACTGG 3 cut(s) 615, 844, 1511
BssAI RCCGGY 1 cut(s) 1095
BssECI CCNNGG 5 cut(s) 299, 314, 1476, 1587, 1863
BssMI GATC 6 cut(s) 295, 307, 1027, 1558, 1696, 2020
BssT1I CCWWGG 3 cut(s) 1476, 1587, 1863
Bst2UI CCWGG 1 cut(s) 416
Bst4CI ACNGT 2 cut(s) 147, 1009
Bst6I CTCTTC 5 cut(s) 120, 339, 1554, 1673, 1703
BstAUI TGTACA 1 cut(s) 1515
BstBI TTCGAA 1 cut(s) 739
BstC8I GCNNGC 5 cut(s) 49, 625, 672, 1805, 1818
BstDEI CTNAG 6 cut(s) 969, 1536, 1646, 1672, 1958, 1991
BstEII GGTNACC 1 cut(s) 141
BstF5I GGATG 2 cut(s) 948, 1303
BstFNI CGCG 1 cut(s) 222
BstHHI GCGC 3 cut(s) 7, 224, 634
BstKTI GATC 6 cut(s) 298, 310, 1030, 1561, 1699, 2023
BstMAI GTCTC 6 cut(s) 153, 288, 473, 1075, 1705, 1941
BstMBI GATC 6 cut(s) 295, 307, 1027, 1558, 1696, 2020
BstMCI CGRYCG 1 cut(s) 237
BstMWI GCNNNNNNNGC 6 cut(s) 197, 228, 629, 962, 971, 1813
BstNI CCWGG 1 cut(s) 416
BstNSI RCATGY 3 cut(s) 1119, 1803, 1849
BstPI GGTNACC 1 cut(s) 141
BstSCI CCNGG 3 cut(s) 231, 313, 414
BstSFI CTRYAG 1 cut(s) 2040
BstUI CGCG 1 cut(s) 222
BstV1I GCAGC 6 cut(s) 145, 184, 251, 514, 977, 1999
BstV2I GAAGAC 3 cut(s) 1010, 1587, 1802
BstX2I RGATCY 3 cut(s) 295, 1027, 2020
BstYI RGATCY 3 cut(s) 295, 1027, 2020
BstZI CGGCCG 1 cut(s) 234
BsuI GTATCC 1 cut(s) 989
BsuRI GGCC 5 cut(s) 169, 191, 231, 236, 890
BtrI CACGTC 1 cut(s) 937
BtsCI GGATG 2 cut(s) 948, 1303
BtsI GCAGTG 1 cut(s) 876
BtsIMutI CAGTG 7 cut(s) 333, 395, 608, 851, 876, 1504, 1914
Cac8I GCNNGC 5 cut(s) 49, 625, 672, 1805, 1818
CfoI GCGC 3 cut(s) 7, 224, 634
Cfr10I RCCGGY 1 cut(s) 1095
Cfr13I GGNCC 6 cut(s) 114, 168, 190, 230, 1144, 1859
CseI GACGC 1 cut(s) 326
Csp6I GTAC 5 cut(s) 319, 412, 1483, 1516, 2031
CviAII CATG 7 cut(s) 269, 1116, 1352, 1577, 1800, 1846, 1933
CviQI GTAC 5 cut(s) 319, 412, 1483, 1516, 2031
DdeI CTNAG 6 cut(s) 969, 1536, 1646, 1672, 1958, 1991
DpnI GATC 6 cut(s) 297, 309, 1029, 1560, 1698, 2022
DpnII GATC 6 cut(s) 295, 307, 1027, 1558, 1696, 2020
EaeI YGGCCR 1 cut(s) 234
EagI CGGCCG 1 cut(s) 234
Eam1104I CTCTTC 5 cut(s) 120, 339, 1554, 1673, 1703
EarI CTCTTC 5 cut(s) 120, 339, 1554, 1673, 1703
Ecl136II GAGCTC 1 cut(s) 1547
EclXI CGGCCG 1 cut(s) 234
Eco130I CCWWGG 3 cut(s) 1476, 1587, 1863
Eco24I GRGCYC 2 cut(s) 276, 1549
Eco32I GATATC 2 cut(s) 42, 795
Eco47I GGWCC 3 cut(s) 114, 1144, 1859
Eco52I CGGCCG 1 cut(s) 234
Eco53kI GAGCTC 1 cut(s) 1547
Eco57I CTGAAG 1 cut(s) 479
Eco91I GGTNACC 1 cut(s) 141
EcoICRI GAGCTC 1 cut(s) 1547
EcoO109I RGGNCCY 2 cut(s) 190, 1144
EcoO65I GGTNACC 1 cut(s) 141
EcoRII CCWGG 1 cut(s) 414
EcoRV GATATC 2 cut(s) 42, 795
EcoT14I CCWWGG 3 cut(s) 1476, 1587, 1863
EcoT22I ATGCAT 1 cut(s) 1462
EcoT38I GRGCYC 2 cut(s) 276, 1549
ErhI CCWWGG 3 cut(s) 1476, 1587, 1863
Esp3I CGTCTC 1 cut(s) 153
FaeI CATG 7 cut(s) 272, 1119, 1355, 1580, 1803, 1849, 1936
FalI AAGNNNNNCTT 2 cut(s) 1298, 1330
FaqI GGGAC 2 cut(s) 1157, 1845
FatI CATG 7 cut(s) 268, 1115, 1351, 1576, 1799, 1845, 1932
FauNDI CATATG 1 cut(s) 1462
FokI GGATG 2 cut(s) 955, 1310
FriOI GRGCYC 2 cut(s) 276, 1549
FspBI CTAG 1 cut(s) 1638
GlaI GCGC 3 cut(s) 6, 223, 633
GsaI CCCAGC 2 cut(s) 1544, 1627
GsuI CTGGAG 2 cut(s) 437, 1218
HaeIII GGCC 5 cut(s) 169, 191, 231, 236, 890
HapII CCGG 4 cut(s) 233, 314, 556, 1096
HgaI GACGC 1 cut(s) 326
HhaI GCGC 3 cut(s) 7, 224, 634
Hin1II CATG 7 cut(s) 272, 1119, 1355, 1580, 1803, 1849, 1936
Hin6I GCGC 3 cut(s) 5, 222, 632
HinP1I GCGC 3 cut(s) 5, 222, 632
HindIII AAGCTT 1 cut(s) 1037
HinfI GANTC 3 cut(s) 385, 454, 1583
HpaII CCGG 4 cut(s) 233, 314, 556, 1096
HphI GGTGA 3 cut(s) 25, 377, 630
Hpy166II GTNNAC 2 cut(s) 764, 1834
Hpy8I GTNNAC 2 cut(s) 764, 1834
Hpy99I CGWCG 2 cut(s) 601, 2031
HpyAV CCTTC 2 cut(s) 100, 846
HpyCH4III ACNGT 2 cut(s) 147, 1009
HpyCH4IV ACGT 2 cut(s) 936, 2029
HpyF10VI GCNNNNNNNGC 6 cut(s) 197, 228, 629, 962, 971, 1813
HpyF3I CTNAG 6 cut(s) 969, 1536, 1646, 1672, 1958, 1991
HpySE526I ACGT 2 cut(s) 936, 2029
Hsp92II CATG 7 cut(s) 272, 1119, 1355, 1580, 1803, 1849, 1936
HspAI GCGC 3 cut(s) 5, 222, 632
KpnI GGTACC 1 cut(s) 1486
Kzo9I GATC 6 cut(s) 295, 307, 1027, 1558, 1696, 2020
LguI GCTCTTC 1 cut(s) 1554
LmnI GCTCC 4 cut(s) 1112, 1169, 1521, 1544
Lsp1109I GCAGC 6 cut(s) 145, 184, 251, 514, 977, 1999
LweI GCATC 3 cut(s) 250, 1519, 1867
MaeI CTAG 1 cut(s) 1638
MaeII ACGT 2 cut(s) 936, 2029
MaeIII GTNAC 5 cut(s) 17, 141, 209, 365, 1009
MalI GATC 6 cut(s) 297, 309, 1029, 1560, 1698, 2022
MbiI CCGCTC 1 cut(s) 442
MboI GATC 6 cut(s) 295, 307, 1027, 1558, 1696, 2020
MfeI CAATTG 2 cut(s) 370, 798
MflI RGATCY 3 cut(s) 295, 1027, 2020
MhlI GDGCHC 2 cut(s) 276, 1549
MlyI GAGTC 1 cut(s) 1577
MmeI TCCRAC 5 cut(s) 184, 375, 513, 1032, 1325
Mph1103I ATGCAT 1 cut(s) 1462
MroXI GAANNNNTTC 4 cut(s) 691, 1194, 1359, 1721
MseI TTAA 9 cut(s) 132, 216, 249, 810, 1152, 1316, 1377, 1568, 1787
MspA1I CMGCKG 5 cut(s) 242, 1175, 1807, 1990, 2045
MspI CCGG 4 cut(s) 233, 314, 556, 1096
MspR9I CCNGG 3 cut(s) 233, 315, 416
MunI CAATTG 2 cut(s) 370, 798
Mva1269I GAATGC 2 cut(s) 7, 986
MvaI CCWGG 1 cut(s) 416
MvnI CGCG 1 cut(s) 222
MwoI GCNNNNNNNGC 6 cut(s) 197, 228, 629, 962, 971, 1813
NciI CCSGG 2 cut(s) 233, 315
NdeI CATATG 1 cut(s) 1462
NdeII GATC 6 cut(s) 295, 307, 1027, 1558, 1696, 2020
NlaIII CATG 7 cut(s) 272, 1119, 1355, 1580, 1803, 1849, 1936
NlaIV GGNNCC 7 cut(s) 115, 297, 1145, 1171, 1484, 1523, 1861
NmeAIII GCCGAG 2 cut(s) 916, 1627
NmuCI GTSAC 3 cut(s) 17, 209, 365
NsiI ATGCAT 1 cut(s) 1462
NspI RCATGY 3 cut(s) 1119, 1803, 1849
NspV TTCGAA 1 cut(s) 739
PciSI GCTCTTC 1 cut(s) 1554
PctI GAATGC 2 cut(s) 7, 986
PdmI GAANNNNTTC 4 cut(s) 691, 1194, 1359, 1721
PfeI GAWTC 2 cut(s) 385, 454
PleI GAGTC 1 cut(s) 1577
PpsI GAGTC 1 cut(s) 1577
PpuMI RGGWCCY 1 cut(s) 1144
PshBI ATTAAT 1 cut(s) 216
PsiI TTATAA 1 cut(s) 1305
Psp124BI GAGCTC 1 cut(s) 1549
Psp5II RGGWCCY 1 cut(s) 1144
Psp6I CCWGG 1 cut(s) 414
PspEI GGTNACC 1 cut(s) 141
PspFI CCCAGC 2 cut(s) 1540, 1623
PspGI CCWGG 1 cut(s) 414
PspN4I GGNNCC 7 cut(s) 115, 297, 1145, 1171, 1484, 1523, 1861
PspPI GGNCC 6 cut(s) 114, 168, 190, 230, 1144, 1859
PspPPI RGGWCCY 1 cut(s) 1144
PstI CTGCAG 1 cut(s) 2044
PsuI RGATCY 3 cut(s) 295, 1027, 2020
PvuII CAGCTG 4 cut(s) 242, 1807, 1990, 2045
RsaI GTAC 5 cut(s) 320, 413, 1484, 1517, 2032
RsaNI GTAC 5 cut(s) 319, 412, 1483, 1516, 2031
SacI GAGCTC 1 cut(s) 1549
SapI GCTCTTC 1 cut(s) 1554
SaqAI TTAA 9 cut(s) 132, 216, 249, 810, 1152, 1316, 1377, 1568, 1787
Sau3AI GATC 6 cut(s) 295, 307, 1027, 1558, 1696, 2020
Sau96I GGNCC 6 cut(s) 114, 168, 190, 230, 1144, 1859
SchI GAGTC 1 cut(s) 1577
ScrFI CCNGG 3 cut(s) 233, 315, 416
SduI GDGCHC 2 cut(s) 276, 1549
SfaNI GCATC 3 cut(s) 250, 1519, 1867
SfcI CTRYAG 1 cut(s) 2040
SfuI TTCGAA 1 cut(s) 739
SinI GGWCC 3 cut(s) 114, 1144, 1859
SmlI CTYRAG 4 cut(s) 707, 788, 1320, 1612
SmoI CTYRAG 4 cut(s) 707, 788, 1320, 1612
SsiI CCGC 7 cut(s) 161, 237, 442, 559, 803, 1173, 1753
SspMI CTAG 1 cut(s) 1638
SstI GAGCTC 1 cut(s) 1549
StyD4I CCNGG 3 cut(s) 231, 313, 414
StyI CCWWGG 3 cut(s) 1476, 1587, 1863
TaaI ACNGT 2 cut(s) 147, 1009
TaiI ACGT 2 cut(s) 939, 2032
TaqI TCGA 6 cut(s) 276, 452, 507, 739, 1339, 2026
TatI WGTACW 1 cut(s) 1515
TauI GCSGC 4 cut(s) 239, 562, 1175, 1756
TfiI GAWTC 2 cut(s) 385, 454
Tru1I TTAA 9 cut(s) 132, 216, 249, 810, 1152, 1316, 1377, 1568, 1787
Tru9I TTAA 9 cut(s) 132, 216, 249, 810, 1152, 1316, 1377, 1568, 1787
TscAI CASTG 7 cut(s) 333, 395, 615, 851, 876, 1511, 1914
TseFI GTSAC 3 cut(s) 17, 209, 365
TseI GCWGC 7 cut(s) 158, 197, 239, 527, 965, 1987, 2042
Tsp45I GTSAC 3 cut(s) 17, 209, 365
TspDTI ATGAA 7 cut(s) 257, 1255, 1368, 1511, 1593, 1743, 1755
TspRI CASTG 7 cut(s) 333, 395, 615, 851, 876, 1511, 1914
VpaK11BI GGWCC 3 cut(s) 114, 1144, 1859
VspI ATTAAT 1 cut(s) 216
XapI RAATTY 3 cut(s) 34, 775, 1179
XceI RCATGY 3 cut(s) 1119, 1803, 1849
XmnI GAANNNNTTC 4 cut(s) 691, 1194, 1359, 1721
XspI CTAG 1 cut(s) 1638
Zsp2I ATGCAT 1 cut(s) 1462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.