Rh6BG452100

Exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0012363
Physical Location & Seq
Forward (+)
66603969 .. 66607531
3563 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG452100.1

Sequence Viewer

Length: 2061 bp
ATGGCGCATTCGGTGAGTGACAAGAGTATTCAGAATTTGATATCTGCAAGCAAGTCATTGAGGCTGAGCTTACAGAAATCACAGGGGTTGGGGTTGGCTTTAGAGAAGGCAGGGTCCAGATTTGAAGAGATTAACCAGAGATTACCGTCTCTTCAAGCTGCGGTTCGGCCCATTCGGGCTGATAAGGAGGCCCTTGCTGCTGTTGGAGGTCACATTAATCGCGCTGTTGGCCCGGCCGCAGCTGTGCTTAAAGTGTTTGATGCTGTTCATGGGCTCGAAAAGTCTCTGTTATCGGATCCGAGGAGTGATCTTCCGGGGTACTTATCAGTGTTGAAGCGTCTGGAAGAGGCTTTGAAGTTTCTGGGTGTCAATTGTGACTTGGCGATTCAGTGGTTGGAGGATATGGTAGAGTACTTGGAGGATAATGCAGTTGCAGATGAGCGGTATCTTTCGAATCTGAAGAAGTCGTTGAAAAGTCTCAGAGAATTGCAGAGTGATGAGGGAAAGGCTTATCTTGATGGGGGGCTTTTGGAGGCTGCGTTGGACAAGTTAGAAAATGAGTTCCGGCGGCTCCTTACAGAACATAGTGTGCCACTTCCAATGTCGTCGTCATCATCACTGGGAGAACAAGCCTGCATTGCGCCATCACCATTACCTGTTATGGTAATCCAGAAGTTGCAAGCTATTATTGGAAGAATGATTTCTAATAATAGACTTGAGAAGTGTATATCTATTTATGTTGAAGTTCGAAGTTCAAATGTAAGGGCAAGTTTACAAGCTCTGAATTTGGATTACCTTGAGATATCAATTGCGGAGTTTAATGATGTGCAAAGCATAGAGGGGTATATAGCCCAGTGGGGAAGGCATTTGGAGTTTGCAGTGAAACACTTGTTTGAGGCCGAGTATAAGCTGTGCAATGATGTCTTTGAAAGGATTGGATTGGACGTGTGGATGGGTTGTTTTGCGAAGATTGCAGCTCAGGCTGGTATCCTTGCATTCCTACAATTTGGAAAGACTGTTACAGACAGCAAGAAAGATCCGATAAAGCTTTTGAAGTTGTTGGATATATTTGCTTCTCTGAACAAGTTGAGACTTGATTTCAACCGGCTTTTTGGGGGAGGAGCATGTGTTGAAATCCAAAACCTGACAAGGGACCTTATTAAGAGTGTCATTGATGGAGCCGCTGAAATTTTTTGGGAACTTCTTCGTCAGGTGGAGTTGCAAAGGCACAACCCACCTCCTCCAGATGGGAGTGTTCCAAAATTGGTCAGTTTCATTACTGATTATTGTAATAAACTGCTTGGGGATGATTATAAGCCAATCTTAACTCAAGTTCTGATTATCCATCGAAGTTGGAAGCATGAAAAGTTTCAAGAGAAACTCCTTATTAATGAGGTTCTGGAAATTGCTAAAGCGATTGAGCAAAACTTGGAGGCTTGGATAAGGGCGTATGGCGATACCTCAAAGGCGTATGGCAATCCCTCCTTGGGGCACCTTTTTGCAATGAACAACCACTGGCATCTGTACAGGAGCCTAAAAGGAACTAAGCTGGGAGCTCTTCTGGGGGATCGCTGGTTAAGAGAACATGAAGAGTCCAAGGGCTATTATGCCGAGTCATTCTTGAGAGAGAGCTGGGGGAAACTTCCTAGTCATCTGAGTAGAGAGGGTCTAATTCTCTTCTCAGGTGGTCGTGCGACTGCCCGTGATCTTGTCAAGAAGAGACTGAAAACTTTCAATGAAGCCTTTGATGAAATGTATAAGCGGCAGTCAAATTGGATAGTGTCAGATAAAGATTTAAGGGAGAAGACATGCCAGCTGATAGTGCAGGCAGTTGTGCCTGTTTACAGAAGCTACATGCAGAATTATGGCCCCTTGGTTGAGCAAGATGCGAGTTCAAGCAAGTATGCAAAGTATTCAGTGCAGACTTTGGAGAAAATGCTCATGTCTCTCTTTCAGCCAAAGCCTCTGAGATATGGCAGTTTCAAAGGTAGTAGGCAGCTGAGTGGAAACTTCAACAATGGAGTAAAAGATCTTCGACGTACTACCTCTGCAGCTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006887 GO:0008150 GO:0009987 GO:0016192 GO:0032940 GO:0046903 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Exo70

Protein Analysis

686

Amino Acids

77.21

Weight (kDa)

8.77

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 77 - 194 1.6e-14 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 285 - 648 1.2e-100 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31540
fragaria_vesca FvH4_2g36720 FvH4_2g36720
malus_domestica MD08G1127600.v1.1 MD15G1106900.v1.1
prunus_persica Prupe.1G459300_v2.0.a1
pyrus_communis pycom08g10620 pycom08g10630 pycom15g09770
rosa_chinensis RchiOBHm_Chr6g0305081
rosa_laevigata RLG00000010920
rosa_multiflora Rmu_sc0000061.1_g000027
rosa_roxburghii Rroxscaffold_7G00163160
rosa_rugosa Rorug06G0337200
rosa_samantha Rh6AG449000 Rh6BG452100 Rh6CG462700 Rh6DG449400
rosa_wichuraiana Rw6G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1314
AccB1I GGYRCC 1 cut(s) 1491
AccBSI CCGCTC 1 cut(s) 442
AccII CGCG 1 cut(s) 222
AciI CCGC 7 cut(s) 161, 237, 442, 568, 812, 1182, 1762
AclWI GGATC 4 cut(s) 290, 303, 1031, 1575
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 3 cut(s) 34, 784, 1188
AcuI CTGAAG 1 cut(s) 479
AfaI GTAC 4 cut(s) 320, 413, 1526, 2041
AfiI CCNNNNNNNGG 4 cut(s) 1150, 1247, 1487, 1488
AflIII ACRYGT 1 cut(s) 945
AjiI CACGTC 1 cut(s) 946
Alw21I GWGCWC 1 cut(s) 1558
Alw26I GTCTC 6 cut(s) 153, 288, 482, 1084, 1714, 1950
AlwI GGATC 4 cut(s) 290, 303, 1031, 1575
AoxI GGCC 6 cut(s) 167, 189, 229, 234, 897, 1867
ApeKI GCWGC 7 cut(s) 158, 197, 239, 536, 974, 1996, 2051
ApoI RAATTY 3 cut(s) 34, 784, 1188
AseI ATTAAT 2 cut(s) 216, 1389
Asp700I GAANNNNTTC 4 cut(s) 700, 1203, 1368, 1730
AspLEI GCGC 3 cut(s) 7, 224, 643
AspS9I GGNCC 6 cut(s) 114, 168, 190, 230, 1153, 1868
AsuC2I CCSGG 2 cut(s) 233, 315
AsuHPI GGTGA 2 cut(s) 25, 639
AsuII TTCGAA 2 cut(s) 452, 748
AvaII GGWCC 2 cut(s) 114, 1153
BaeGI GKGCMC 1 cut(s) 1494
BamHI GGATCC 1 cut(s) 295
BanI GGYRCC 1 cut(s) 1491
BanII GRGCYC 2 cut(s) 276, 1558
BarI GAAGNNNNNNTAC 2 cut(s) 2016, 2048
BbsI GAAGAC 1 cut(s) 1811
Bbv12I GWGCWC 1 cut(s) 1558
BbvI GCAGC 6 cut(s) 145, 184, 251, 523, 986, 2008
BccI CCATC 6 cut(s) 512, 652, 946, 1169, 1241, 1353
BciVI GTATCC 1 cut(s) 998
BcnI CCSGG 2 cut(s) 233, 315
BcoDI GTCTC 6 cut(s) 153, 288, 482, 1084, 1714, 1950
BfaI CTAG 1 cut(s) 1647
BfmI CTRYAG 1 cut(s) 2049
BfuI GTATCC 1 cut(s) 998
BglII AGATCT 1 cut(s) 2029
BlpI GCTNAGC 1 cut(s) 65
BmcAI AGTACT 1 cut(s) 413
Bme1390I CCNGG 2 cut(s) 233, 315
Bme18I GGWCC 2 cut(s) 114, 1153
BmgBI CACGTC 1 cut(s) 946
BmgT120I GGNCC 6 cut(s) 114, 168, 190, 230, 1153, 1868
BmiI GGNNCC 8 cut(s) 115, 297, 572, 1154, 1180, 1493, 1532, 1870
BmrFI CCNGG 2 cut(s) 233, 315
BmrI ACTGGG 2 cut(s) 629, 847
BmsI GCATC 3 cut(s) 250, 1528, 1876
BmuI ACTGGG 2 cut(s) 629, 847
BpiI GAAGAC 1 cut(s) 1811
BpmI CTGGAG 1 cut(s) 1227
Bpu10I CCTNAGC 1 cut(s) 978
Bpu1102I GCTNAGC 1 cut(s) 65
Bpu14I TTCGAA 2 cut(s) 452, 748
BpuEI CTTGAG 4 cut(s) 737, 818, 1314, 1642
BpuMI CCSGG 2 cut(s) 233, 315
BsaJI CCNNGG 5 cut(s) 299, 314, 1485, 1596, 1872
BsaXI ACNNNNNCTCC 4 cut(s) 524, 554, 1113, 1143
Bsc4I CCNNNNNNNGG 4 cut(s) 1150, 1247, 1487, 1488
Bse118I RCCGGY 1 cut(s) 1104
Bse1I ACTGG 3 cut(s) 624, 853, 1520
Bse3DI GCAATG 3 cut(s) 636, 922, 1509
BseDI CCNNGG 5 cut(s) 299, 314, 1485, 1596, 1872
BseGI GGATG 2 cut(s) 957, 1312
BseLI CCNNNNNNNGG 4 cut(s) 1150, 1247, 1487, 1488
BseMI GCAATG 3 cut(s) 636, 922, 1509
BseMII CTCAG 7 cut(s) 56, 493, 992, 1646, 1695, 1958, 1991
BseNI ACTGG 3 cut(s) 624, 853, 1520
BseRI GAGGAG 3 cut(s) 316, 1134, 1230
BseSI GKGCMC 1 cut(s) 1494
BseX3I CGGCCG 1 cut(s) 234
BseXI GCAGC 6 cut(s) 145, 184, 251, 523, 986, 2008
BseYI CCCAGC 2 cut(s) 1549, 1632
BsgI GTGCAG 2 cut(s) 1844, 1940
Bsh1236I CGCG 1 cut(s) 222
Bsh1285I CGRYCG 1 cut(s) 237
BshFI GGCC 6 cut(s) 169, 191, 231, 236, 899, 1869
BshNI GGYRCC 1 cut(s) 1491
BsiEI CGRYCG 1 cut(s) 237
BsiHKAI GWGCWC 1 cut(s) 1558
BsiSI CCGG 4 cut(s) 233, 314, 565, 1105
BslFI GGGAC 1 cut(s) 1166
BslI CCNNNNNNNGG 4 cut(s) 1150, 1247, 1487, 1488
BsmAI GTCTC 6 cut(s) 153, 288, 482, 1084, 1714, 1950
BsmBI CGTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 1166
BsmI GAATGC 2 cut(s) 7, 995
BsnI GGCC 6 cut(s) 169, 191, 231, 236, 899, 1869
Bsp119I TTCGAA 2 cut(s) 452, 748
Bsp1286I GDGCHC 3 cut(s) 276, 1494, 1558
Bsp1407I TGTACA 1 cut(s) 1524
Bsp143I GATC 6 cut(s) 295, 307, 1036, 1567, 1705, 2029
Bsp1720I GCTNAGC 1 cut(s) 65
BspACI CCGC 7 cut(s) 161, 237, 442, 568, 812, 1182, 1762
BspANI GGCC 6 cut(s) 169, 191, 231, 236, 899, 1869
BspCNI CTCAG 7 cut(s) 57, 492, 991, 1647, 1694, 1959, 1992
BspFNI CGCG 1 cut(s) 222
BspLI GGNNCC 8 cut(s) 115, 297, 572, 1154, 1180, 1493, 1532, 1870
BspMAI CTGCAG 1 cut(s) 2053
BspPI GGATC 4 cut(s) 290, 303, 1031, 1575
BspQI GCTCTTC 1 cut(s) 1563
BspT104I TTCGAA 2 cut(s) 452, 748
BspT107I GGYRCC 1 cut(s) 1491
BsrBI CCGCTC 1 cut(s) 442
BsrDI GCAATG 3 cut(s) 636, 922, 1509
BsrFI RCCGGY 1 cut(s) 1104
BsrGI TGTACA 1 cut(s) 1524
BsrI ACTGG 3 cut(s) 624, 853, 1520
BssAI RCCGGY 1 cut(s) 1104
BssECI CCNNGG 5 cut(s) 299, 314, 1485, 1596, 1872
BssMI GATC 6 cut(s) 295, 307, 1036, 1567, 1705, 2029
BssT1I CCWWGG 3 cut(s) 1485, 1596, 1872
Bst4CI ACNGT 2 cut(s) 147, 1018
Bst6I CTCTTC 7 cut(s) 120, 156, 339, 1563, 1584, 1682, 1712
BstAUI TGTACA 1 cut(s) 1524
BstBI TTCGAA 2 cut(s) 452, 748
BstC8I GCNNGC 5 cut(s) 49, 634, 681, 1814, 1827
BstDEI CTNAG 8 cut(s) 65, 479, 978, 1545, 1655, 1681, 1967, 2000
BstF5I GGATG 2 cut(s) 957, 1312
BstFNI CGCG 1 cut(s) 222
BstHHI GCGC 3 cut(s) 7, 224, 643
BstKTI GATC 6 cut(s) 298, 310, 1039, 1570, 1708, 2032
BstMAI GTCTC 6 cut(s) 153, 288, 482, 1084, 1714, 1950
BstMBI GATC 6 cut(s) 295, 307, 1036, 1567, 1705, 2029
BstMCI CGRYCG 1 cut(s) 237
BstMWI GCNNNNNNNGC 6 cut(s) 197, 228, 638, 971, 980, 1822
BstNSI RCATGY 3 cut(s) 1128, 1812, 1858
BstSCI CCNGG 2 cut(s) 231, 313
BstSFI CTRYAG 1 cut(s) 2049
BstSLI GKGCMC 1 cut(s) 1494
BstUI CGCG 1 cut(s) 222
BstV1I GCAGC 6 cut(s) 145, 184, 251, 523, 986, 2008
BstV2I GAAGAC 1 cut(s) 1811
BstX2I RGATCY 3 cut(s) 295, 1036, 2029
BstYI RGATCY 3 cut(s) 295, 1036, 2029
BstZI CGGCCG 1 cut(s) 234
BsuI GTATCC 1 cut(s) 998
BsuRI GGCC 6 cut(s) 169, 191, 231, 236, 899, 1869
BtrI CACGTC 1 cut(s) 946
BtsCI GGATG 2 cut(s) 957, 1312
BtsI GCAGTG 1 cut(s) 885
BtsIMutI CAGTG 7 cut(s) 333, 395, 617, 860, 885, 1513, 1923
Cac8I GCNNGC 5 cut(s) 49, 634, 681, 1814, 1827
CfoI GCGC 3 cut(s) 7, 224, 643
Cfr10I RCCGGY 1 cut(s) 1104
Cfr13I GGNCC 6 cut(s) 114, 168, 190, 230, 1153, 1868
CseI GACGC 1 cut(s) 326
Csp6I GTAC 4 cut(s) 319, 412, 1525, 2040
CviAII CATG 7 cut(s) 269, 1125, 1361, 1586, 1809, 1855, 1942
CviQI GTAC 4 cut(s) 319, 412, 1525, 2040
DdeI CTNAG 8 cut(s) 65, 479, 978, 1545, 1655, 1681, 1967, 2000
DpnI GATC 6 cut(s) 297, 309, 1038, 1569, 1707, 2031
DpnII GATC 6 cut(s) 295, 307, 1036, 1567, 1705, 2029
EaeI YGGCCR 1 cut(s) 234
EagI CGGCCG 1 cut(s) 234
Eam1104I CTCTTC 7 cut(s) 120, 156, 339, 1563, 1584, 1682, 1712
EarI CTCTTC 7 cut(s) 120, 156, 339, 1563, 1584, 1682, 1712
Ecl136II GAGCTC 1 cut(s) 1556
EclXI CGGCCG 1 cut(s) 234
Eco130I CCWWGG 3 cut(s) 1485, 1596, 1872
Eco24I GRGCYC 2 cut(s) 276, 1558
Eco32I GATATC 2 cut(s) 42, 804
Eco47I GGWCC 2 cut(s) 114, 1153
Eco52I CGGCCG 1 cut(s) 234
Eco53kI GAGCTC 1 cut(s) 1556
Eco57I CTGAAG 1 cut(s) 479
EcoICRI GAGCTC 1 cut(s) 1556
EcoO109I RGGNCCY 2 cut(s) 190, 1153
EcoRV GATATC 2 cut(s) 42, 804
EcoT14I CCWWGG 3 cut(s) 1485, 1596, 1872
EcoT38I GRGCYC 2 cut(s) 276, 1558
ErhI CCWWGG 3 cut(s) 1485, 1596, 1872
Esp3I CGTCTC 1 cut(s) 153
FaeI CATG 7 cut(s) 272, 1128, 1364, 1589, 1812, 1858, 1945
FalI AAGNNNNNCTT 2 cut(s) 1307, 1339
FaqI GGGAC 1 cut(s) 1166
FatI CATG 7 cut(s) 268, 1124, 1360, 1585, 1808, 1854, 1941
FokI GGATG 2 cut(s) 964, 1319
FriOI GRGCYC 2 cut(s) 276, 1558
FspBI CTAG 1 cut(s) 1647
GlaI GCGC 3 cut(s) 6, 223, 642
GsaI CCCAGC 2 cut(s) 1553, 1636
GsuI CTGGAG 1 cut(s) 1227
HaeIII GGCC 6 cut(s) 169, 191, 231, 236, 899, 1869
HapII CCGG 4 cut(s) 233, 314, 565, 1105
HgaI GACGC 1 cut(s) 326
HhaI GCGC 3 cut(s) 7, 224, 643
Hin1II CATG 7 cut(s) 272, 1128, 1364, 1589, 1812, 1858, 1945
Hin6I GCGC 3 cut(s) 5, 222, 641
HinP1I GCGC 3 cut(s) 5, 222, 641
HindIII AAGCTT 1 cut(s) 1046
HinfI GANTC 4 cut(s) 385, 454, 1592, 1613
HpaII CCGG 4 cut(s) 233, 314, 565, 1105
HphI GGTGA 2 cut(s) 25, 639
Hpy166II GTNNAC 2 cut(s) 773, 1843
Hpy188III TCNNGA 9 cut(s) 117, 341, 515, 670, 1244, 1373, 1400, 1621, 1714
Hpy8I GTNNAC 2 cut(s) 773, 1843
Hpy99I CGWCG 2 cut(s) 610, 2040
HpyAV CCTTC 2 cut(s) 100, 855
HpyCH4III ACNGT 2 cut(s) 147, 1018
HpyCH4IV ACGT 2 cut(s) 945, 2038
HpyF10VI GCNNNNNNNGC 6 cut(s) 197, 228, 638, 971, 980, 1822
HpyF3I CTNAG 8 cut(s) 65, 479, 978, 1545, 1655, 1681, 1967, 2000
HpySE526I ACGT 2 cut(s) 945, 2038
Hsp92II CATG 7 cut(s) 272, 1128, 1364, 1589, 1812, 1858, 1945
HspAI GCGC 3 cut(s) 5, 222, 641
Kzo9I GATC 6 cut(s) 295, 307, 1036, 1567, 1705, 2029
LguI GCTCTTC 1 cut(s) 1563
LmnI GCTCC 5 cut(s) 576, 1121, 1178, 1530, 1553
Lsp1109I GCAGC 6 cut(s) 145, 184, 251, 523, 986, 2008
LweI GCATC 3 cut(s) 250, 1528, 1876
MaeI CTAG 1 cut(s) 1647
MaeII ACGT 2 cut(s) 945, 2038
MaeIII GTNAC 4 cut(s) 17, 209, 374, 1018
MalI GATC 6 cut(s) 297, 309, 1038, 1569, 1707, 2031
MbiI CCGCTC 1 cut(s) 442
MboI GATC 6 cut(s) 295, 307, 1036, 1567, 1705, 2029
MfeI CAATTG 2 cut(s) 370, 807
MflI RGATCY 3 cut(s) 295, 1036, 2029
MhlI GDGCHC 3 cut(s) 276, 1494, 1558
MlyI GAGTC 2 cut(s) 1601, 1622
MmeI TCCRAC 5 cut(s) 184, 375, 522, 1041, 1334
MroXI GAANNNNTTC 4 cut(s) 700, 1203, 1368, 1730
MseI TTAA 9 cut(s) 132, 216, 249, 819, 1161, 1325, 1389, 1577, 1796
MspA1I CMGCKG 5 cut(s) 242, 1184, 1816, 1999, 2054
MspI CCGG 4 cut(s) 233, 314, 565, 1105
MspR9I CCNGG 2 cut(s) 233, 315
MunI CAATTG 2 cut(s) 370, 807
Mva1269I GAATGC 2 cut(s) 7, 995
MvnI CGCG 1 cut(s) 222
MwoI GCNNNNNNNGC 6 cut(s) 197, 228, 638, 971, 980, 1822
NciI CCSGG 2 cut(s) 233, 315
NdeII GATC 6 cut(s) 295, 307, 1036, 1567, 1705, 2029
NlaIII CATG 7 cut(s) 272, 1128, 1364, 1589, 1812, 1858, 1945
NlaIV GGNNCC 8 cut(s) 115, 297, 572, 1154, 1180, 1493, 1532, 1870
NmeAIII GCCGAG 2 cut(s) 925, 1636
NmuCI GTSAC 3 cut(s) 17, 209, 374
NspI RCATGY 3 cut(s) 1128, 1812, 1858
NspV TTCGAA 2 cut(s) 452, 748
PciSI GCTCTTC 1 cut(s) 1563
PctI GAATGC 2 cut(s) 7, 995
PdmI GAANNNNTTC 4 cut(s) 700, 1203, 1368, 1730
PfeI GAWTC 2 cut(s) 385, 454
PleI GAGTC 2 cut(s) 1600, 1621
PpsI GAGTC 2 cut(s) 1600, 1621
PpuMI RGGWCCY 1 cut(s) 1153
PshBI ATTAAT 2 cut(s) 216, 1389
PsiI TTATAA 1 cut(s) 1314
Psp124BI GAGCTC 1 cut(s) 1558
Psp5II RGGWCCY 1 cut(s) 1153
PspFI CCCAGC 2 cut(s) 1549, 1632
PspN4I GGNNCC 8 cut(s) 115, 297, 572, 1154, 1180, 1493, 1532, 1870
PspPI GGNCC 6 cut(s) 114, 168, 190, 230, 1153, 1868
PspPPI RGGWCCY 1 cut(s) 1153
PstI CTGCAG 1 cut(s) 2053
PsuI RGATCY 3 cut(s) 295, 1036, 2029
PvuII CAGCTG 4 cut(s) 242, 1816, 1999, 2054
RsaI GTAC 4 cut(s) 320, 413, 1526, 2041
RsaNI GTAC 4 cut(s) 319, 412, 1525, 2040
SacI GAGCTC 1 cut(s) 1558
SapI GCTCTTC 1 cut(s) 1563
SaqAI TTAA 9 cut(s) 132, 216, 249, 819, 1161, 1325, 1389, 1577, 1796
Sau3AI GATC 6 cut(s) 295, 307, 1036, 1567, 1705, 2029
Sau96I GGNCC 6 cut(s) 114, 168, 190, 230, 1153, 1868
ScaI AGTACT 1 cut(s) 413
SchI GAGTC 2 cut(s) 1601, 1622
ScrFI CCNGG 2 cut(s) 233, 315
SduI GDGCHC 3 cut(s) 276, 1494, 1558
SfaNI GCATC 3 cut(s) 250, 1528, 1876
SfcI CTRYAG 1 cut(s) 2049
SfuI TTCGAA 2 cut(s) 452, 748
SinI GGWCC 2 cut(s) 114, 1153
SmlI CTYRAG 4 cut(s) 716, 797, 1329, 1621
SmoI CTYRAG 4 cut(s) 716, 797, 1329, 1621
SsiI CCGC 7 cut(s) 161, 237, 442, 568, 812, 1182, 1762
SspMI CTAG 1 cut(s) 1647
SstI GAGCTC 1 cut(s) 1558
StyD4I CCNGG 2 cut(s) 231, 313
StyI CCWWGG 3 cut(s) 1485, 1596, 1872
TaaI ACNGT 2 cut(s) 147, 1018
TaiI ACGT 2 cut(s) 948, 2041
TaqI TCGA 5 cut(s) 276, 452, 748, 1348, 2035
TatI WGTACW 2 cut(s) 411, 1524
TauI GCSGC 4 cut(s) 239, 571, 1184, 1765
TfiI GAWTC 2 cut(s) 385, 454
Tru1I TTAA 9 cut(s) 132, 216, 249, 819, 1161, 1325, 1389, 1577, 1796
Tru9I TTAA 9 cut(s) 132, 216, 249, 819, 1161, 1325, 1389, 1577, 1796
TscAI CASTG 7 cut(s) 333, 395, 624, 860, 885, 1520, 1923
TseFI GTSAC 3 cut(s) 17, 209, 374
TseI GCWGC 7 cut(s) 158, 197, 239, 536, 974, 1996, 2051
Tsp45I GTSAC 3 cut(s) 17, 209, 374
TspDTI ATGAA 7 cut(s) 257, 1264, 1377, 1520, 1602, 1752, 1764
TspRI CASTG 7 cut(s) 333, 395, 624, 860, 885, 1520, 1923
VpaK11BI GGWCC 2 cut(s) 114, 1153
VspI ATTAAT 2 cut(s) 216, 1389
XapI RAATTY 3 cut(s) 34, 784, 1188
XceI RCATGY 3 cut(s) 1128, 1812, 1858
XmnI GAANNNNTTC 4 cut(s) 700, 1203, 1368, 1730
XspI CTAG 1 cut(s) 1647
ZrmI AGTACT 1 cut(s) 413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.