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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24200 AT4G24200 |
| fragaria_vesca | FvH4_2g38250 FvH4_2g38250 |
| malus_domestica | MD08G1010900.v1.1 MD15G1010900.v1.1 |
| prunus_persica | Prupe.1G363500_v2.0.a1 |
| pyrus_communis | pycom08g00970 pycom15g00930 |
| rosa_chinensis | RchiOBHm_Chr6g0303121 |
| rosa_laevigata | RLG00000011106 |
| rosa_multiflora | Rmu_sc0008911.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00165000 |
| rosa_rugosa | Rorug06G0319200 |
| rosa_samantha | Rh6AG433200 Rh6BG469500 Rh6CG445500 Rh6DG432300 |
| rosa_wichuraiana | Rw6G037550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1138, 1971 |
| Acc65I | GGTACC | 1 cut(s) | 2444 |
| AccB1I | GGYRCC | 2 cut(s) | 2444, 2883 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2990 |
| AccII | CGCG | 1 cut(s) | 2818 |
| AciI | CCGC | 2 cut(s) | 1145, 2522 |
| AcoI | YGGCCR | 2 cut(s) | 385, 2263 |
| AcsI | RAATTY | 6 cut(s) | 250, 544, 1539, 2103, 2224, 2320 |
| AcuI | CTGAAG | 3 cut(s) | 540, 1629, 2124 |
| AfaI | GTAC | 7 cut(s) | 367, 519, 595, 657, 2252, 2446, 2606 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 138, 139, 1780, 1781, 2131, 2600, 2680, 2990, 3039 |
| AgeI | ACCGGT | 1 cut(s) | 1897 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1729 |
| AjnI | CCWGG | 5 cut(s) | 899, 1026, 1304, 1564, 2439 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1852, 1884, 1911, 1943 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2228, 2260 |
| Alw26I | GTCTC | 6 cut(s) | 518, 732, 1289, 1790, 1855, 2510 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 596, 1010, 1889, 1994, 2627 |
| Ama87I | CYCGRG | 2 cut(s) | 60, 1318 |
| AoxI | GGCC | 9 cut(s) | 385, 1902, 2016, 2042, 2171, 2263, 2339, 2624, 2810 |
| ApeKI | GCWGC | 7 cut(s) | 164, 322, 1016, 1886, 2271, 2305, 2413 |
| ApoI | RAATTY | 6 cut(s) | 250, 544, 1539, 2103, 2224, 2320 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2251, 2283 |
| AseI | ATTAAT | 1 cut(s) | 83 |
| AsiGI | ACCGGT | 1 cut(s) | 1897 |
| Asp718I | GGTACC | 1 cut(s) | 2444 |
| AspS9I | GGNCC | 5 cut(s) | 1903, 2016, 2172, 2624, 2810 |
| AsuC2I | CCSGG | 4 cut(s) | 133, 1319, 1320, 2793 |
| AsuHPI | GGTGA | 6 cut(s) | 134, 461, 506, 1124, 2219, 2751 |
| AsuII | TTCGAA | 1 cut(s) | 1235 |
| AvaI | CYCGRG | 2 cut(s) | 60, 1318 |
| AxyI | CCTNAGG | 1 cut(s) | 1245 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2436, 2469 |
| BalI | TGGCCA | 1 cut(s) | 387 |
| BamHI | GGATCC | 1 cut(s) | 2696 |
| BanI | GGYRCC | 2 cut(s) | 2444, 2883 |
| BanII | GRGCYC | 2 cut(s) | 746, 2726 |
| BbsI | GAAGAC | 2 cut(s) | 626, 2376 |
| BbvCI | CCTCAGC | 1 cut(s) | 600 |
| BbvI | GCAGC | 7 cut(s) | 151, 309, 1003, 1873, 2283, 2317, 2425 |
| BceAI | ACGGC | 4 cut(s) | 598, 1534, 2250, 2797 |
| BciT130I | CCWGG | 5 cut(s) | 901, 1028, 1306, 1566, 2441 |
| BclI | TGATCA | 1 cut(s) | 2365 |
| BcnI | CCSGG | 4 cut(s) | 133, 1319, 1320, 2793 |
| BcoDI | GTCTC | 6 cut(s) | 518, 732, 1289, 1790, 1855, 2510 |
| BfaI | CTAG | 7 cut(s) | 105, 308, 1392, 1872, 2118, 2952, 3012 |
| BfmI | CTRYAG | 6 cut(s) | 168, 804, 1650, 2010, 2619, 2628 |
| BfuAI | ACCTGC | 2 cut(s) | 1138, 1971 |
| BisI | GCNGC | 7 cut(s) | 165, 323, 1017, 1887, 2272, 2306, 2414 |
| BlsI | GCNGC | 7 cut(s) | 166, 324, 1018, 1888, 2273, 2307, 2415 |
| BmcAI | AGTACT | 1 cut(s) | 367 |
| Bme1390I | CCNGG | 9 cut(s) | 133, 901, 1028, 1306, 1319, 1320, 1566, 2441, 2793 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1729 |
| BmeT110I | CYCGRG | 2 cut(s) | 60, 1318 |
| BmgT120I | GGNCC | 5 cut(s) | 1903, 2016, 2172, 2624, 2810 |
| BmiI | GGNNCC | 6 cut(s) | 1905, 2017, 2446, 2698, 2885, 3000 |
| BmrFI | CCNGG | 9 cut(s) | 133, 901, 1028, 1306, 1319, 1320, 1566, 2441, 2793 |
| BmrI | ACTGGG | 2 cut(s) | 489, 2817 |
| BmuI | ACTGGG | 2 cut(s) | 489, 2817 |
| BpiI | GAAGAC | 2 cut(s) | 626, 2376 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1539, 1571 |
| BpmI | CTGGAG | 2 cut(s) | 382, 714 |
| Bpu10I | CCTNAGC | 1 cut(s) | 600 |
| Bpu14I | TTCGAA | 1 cut(s) | 1235 |
| BpuEI | CTTGAG | 2 cut(s) | 1722, 1740 |
| BpuMI | CCSGG | 4 cut(s) | 133, 1319, 1320, 2793 |
| Bsa29I | ATCGAT | 1 cut(s) | 1425 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2922 |
| BsaI | GGTCTC | 3 cut(s) | 518, 732, 1790 |
| BsaJI | CCNNGG | 5 cut(s) | 899, 1026, 1318, 2440, 3035 |
| BsaWI | WCCGGW | 1 cut(s) | 1897 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2575, 2605 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 138, 139, 1780, 1781, 2131, 2600, 2680, 2990, 3039 |
| Bse118I | RCCGGY | 1 cut(s) | 1897 |
| Bse1I | ACTGG | 4 cut(s) | 484, 1631, 2619, 2823 |
| Bse21I | CCTNAGG | 1 cut(s) | 1245 |
| Bse3DI | GCAATG | 4 cut(s) | 608, 865, 1201, 1267 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2922 |
| BseBI | CCWGG | 5 cut(s) | 901, 1028, 1306, 1566, 2441 |
| BseCI | ATCGAT | 1 cut(s) | 1425 |
| BseDI | CCNNGG | 5 cut(s) | 899, 1026, 1318, 2440, 3035 |
| BseJI | GATNNNNATC | 1 cut(s) | 2922 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 138, 139, 1780, 1781, 2131, 2600, 2680, 2990, 3039 |
| BseMI | GCAATG | 4 cut(s) | 608, 865, 1201, 1267 |
| BseNI | ACTGG | 4 cut(s) | 484, 1631, 2619, 2823 |
| BseRI | GAGGAG | 3 cut(s) | 83, 2097, 2632 |
| BseXI | GCAGC | 7 cut(s) | 151, 309, 1003, 1873, 2283, 2317, 2425 |
| BseYI | CCCAGC | 2 cut(s) | 2807, 2994 |
| BsgI | GTGCAG | 1 cut(s) | 960 |
| Bsh1236I | CGCG | 1 cut(s) | 2818 |
| BshFI | GGCC | 9 cut(s) | 387, 1904, 2018, 2044, 2173, 2265, 2341, 2626, 2812 |
| BshNI | GGYRCC | 2 cut(s) | 2444, 2883 |
| BshTI | ACCGGT | 1 cut(s) | 1897 |
| BshVI | ATCGAT | 1 cut(s) | 1425 |
| BsiHKCI | CYCGRG | 2 cut(s) | 60, 1318 |
| BsiSI | CCGG | 4 cut(s) | 133, 1319, 1898, 2792 |
| BslFI | GGGAC | 3 cut(s) | 667, 2473, 2805 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 138, 139, 1780, 1781, 2131, 2600, 2680, 2990, 3039 |
| BsmAI | GTCTC | 6 cut(s) | 518, 732, 1289, 1790, 1855, 2510 |
| BsmFI | GGGAC | 3 cut(s) | 667, 2473, 2805 |
| BsmI | GAATGC | 1 cut(s) | 712 |
| BsnI | GGCC | 9 cut(s) | 387, 1904, 2018, 2044, 2173, 2265, 2341, 2626, 2812 |
| Bso31I | GGTCTC | 3 cut(s) | 518, 732, 1790 |
| BsoBI | CYCGRG | 2 cut(s) | 60, 1318 |
| Bsp119I | TTCGAA | 1 cut(s) | 1235 |
| Bsp1286I | GDGCHC | 2 cut(s) | 746, 2726 |
| Bsp1407I | TGTACA | 3 cut(s) | 517, 655, 2250 |
| BspACI | CCGC | 2 cut(s) | 1145, 2522 |
| BspANI | GGCC | 9 cut(s) | 387, 1904, 2018, 2044, 2173, 2265, 2341, 2626, 2812 |
| BspDI | ATCGAT | 1 cut(s) | 1425 |
| BspFNI | CGCG | 1 cut(s) | 2818 |
| BspHI | TCATGA | 2 cut(s) | 1720, 2769 |
| BspLI | GGNNCC | 6 cut(s) | 1905, 2017, 2446, 2698, 2885, 3000 |
| BspMAI | CTGCAG | 1 cut(s) | 2632 |
| BspMI | ACCTGC | 2 cut(s) | 1138, 1971 |
| BspQI | GCTCTTC | 1 cut(s) | 1335 |
| BspT104I | TTCGAA | 1 cut(s) | 1235 |
| BspT107I | GGYRCC | 2 cut(s) | 2444, 2883 |
| BspTNI | GGTCTC | 3 cut(s) | 518, 732, 1790 |
| BsrDI | GCAATG | 4 cut(s) | 608, 865, 1201, 1267 |
| BsrFI | RCCGGY | 1 cut(s) | 1897 |
| BsrGI | TGTACA | 3 cut(s) | 517, 655, 2250 |
| BsrI | ACTGG | 4 cut(s) | 484, 1631, 2619, 2823 |
| BssAI | RCCGGY | 1 cut(s) | 1897 |
| BssECI | CCNNGG | 5 cut(s) | 899, 1026, 1318, 2440, 3035 |
| BssT1I | CCWWGG | 1 cut(s) | 3035 |
| Bst2UI | CCWGG | 5 cut(s) | 901, 1028, 1306, 1566, 2441 |
| Bst4CI | ACNGT | 9 cut(s) | 370, 681, 925, 1216, 1232, 1384, 2192, 2207, 2244 |
| Bst6I | CTCTTC | 3 cut(s) | 279, 970, 1335 |
| BstAUI | TGTACA | 3 cut(s) | 517, 655, 2250 |
| BstBI | TTCGAA | 1 cut(s) | 1235 |
| BstC8I | GCNNGC | 4 cut(s) | 154, 1347, 2628, 2786 |
| BstFNI | CGCG | 1 cut(s) | 2818 |
| BstMAI | GTCTC | 6 cut(s) | 518, 732, 1289, 1790, 1855, 2510 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 125, 393, 582, 1016, 1636, 2271 |
| BstNI | CCWGG | 5 cut(s) | 901, 1028, 1306, 1566, 2441 |
| BstSCI | CCNGG | 9 cut(s) | 131, 899, 1026, 1304, 1317, 1318, 1564, 2439, 2791 |
| BstSFI | CTRYAG | 6 cut(s) | 168, 804, 1650, 2010, 2619, 2628 |
| BstUI | CGCG | 1 cut(s) | 2818 |
| BstV1I | GCAGC | 7 cut(s) | 151, 309, 1003, 1873, 2283, 2317, 2425 |
| BstV2I | GAAGAC | 2 cut(s) | 626, 2376 |
| BstX2I | RGATCY | 7 cut(s) | 357, 733, 1624, 1940, 2527, 2696, 2909 |
| BstYI | RGATCY | 7 cut(s) | 357, 733, 1624, 1940, 2527, 2696, 2909 |
| Bsu15I | ATCGAT | 1 cut(s) | 1425 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1245 |
| BsuRI | GGCC | 9 cut(s) | 387, 1904, 2018, 2044, 2173, 2265, 2341, 2626, 2812 |
| BsuTUI | ATCGAT | 1 cut(s) | 1425 |
| BtgZI | GCGATG | 1 cut(s) | 1377 |
| BtsI | GCAGTG | 2 cut(s) | 1179, 2637 |
| BtsIMutI | CAGTG | 6 cut(s) | 955, 1114, 1179, 1605, 2022, 2637 |
| BveI | ACCTGC | 2 cut(s) | 1138, 1971 |
| Cac8I | GCNNGC | 4 cut(s) | 154, 1347, 2628, 2786 |
| CaiI | CAGNNNCTG | 5 cut(s) | 596, 1010, 1889, 1994, 2627 |
| CciI | TCATGA | 2 cut(s) | 1720, 2769 |
| Cfr10I | RCCGGY | 1 cut(s) | 1897 |
| Cfr13I | GGNCC | 5 cut(s) | 1903, 2016, 2172, 2624, 2810 |
| Cfr9I | CCCGGG | 1 cut(s) | 1318 |
| ClaI | ATCGAT | 1 cut(s) | 1425 |
| CseI | GACGC | 1 cut(s) | 2807 |
| CsiI | ACCWGGT | 1 cut(s) | 1564 |
| Csp6I | GTAC | 7 cut(s) | 366, 518, 594, 656, 2251, 2445, 2605 |
| CspAI | ACCGGT | 1 cut(s) | 1897 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1594, 1629 |
| CviAII | CATG | 9 cut(s) | 464, 1721, 1726, 2375, 2660, 2680, 2770, 2848, 2897 |
| CviQI | GTAC | 7 cut(s) | 366, 518, 594, 656, 2251, 2445, 2605 |
| DraI | TTTAAA | 1 cut(s) | 543 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1729 |
| EaeI | YGGCCR | 2 cut(s) | 385, 2263 |
| Eam1104I | CTCTTC | 3 cut(s) | 279, 970, 1335 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1729 |
| EarI | CTCTTC | 3 cut(s) | 279, 970, 1335 |
| Eco130I | CCWWGG | 1 cut(s) | 3035 |
| Eco24I | GRGCYC | 2 cut(s) | 746, 2726 |
| Eco31I | GGTCTC | 3 cut(s) | 518, 732, 1790 |
| Eco32I | GATATC | 1 cut(s) | 1423 |
| Eco57I | CTGAAG | 3 cut(s) | 540, 1629, 2124 |
| Eco81I | CCTNAGG | 1 cut(s) | 1245 |
| Eco88I | CYCGRG | 2 cut(s) | 60, 1318 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2624 |
| EcoRII | CCWGG | 5 cut(s) | 899, 1026, 1304, 1564, 2439 |
| EcoRV | GATATC | 1 cut(s) | 1423 |
| EcoT14I | CCWWGG | 1 cut(s) | 3035 |
| EcoT38I | GRGCYC | 2 cut(s) | 746, 2726 |
| ErhI | CCWWGG | 1 cut(s) | 3035 |
| FaeI | CATG | 9 cut(s) | 467, 1724, 1729, 2378, 2663, 2683, 2773, 2851, 2900 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 171, 203, 1929, 1961, 2563, 2595 |
| FaqI | GGGAC | 3 cut(s) | 667, 2473, 2805 |
| FatI | CATG | 9 cut(s) | 463, 1720, 1725, 2374, 2659, 2679, 2769, 2847, 2896 |
| FauI | CCCGC | 1 cut(s) | 2515 |
| FbaI | TGATCA | 1 cut(s) | 2365 |
| Fnu4HI | GCNGC | 7 cut(s) | 165, 323, 1017, 1887, 2272, 2306, 2414 |
| FriOI | GRGCYC | 2 cut(s) | 746, 2726 |
| Fsp4HI | GCNGC | 7 cut(s) | 165, 323, 1017, 1887, 2272, 2306, 2414 |
| FspBI | CTAG | 7 cut(s) | 105, 308, 1392, 1872, 2118, 2952, 3012 |
| GluI | GCNGC | 7 cut(s) | 165, 323, 1017, 1887, 2272, 2306, 2414 |
| GsaI | CCCAGC | 2 cut(s) | 2811, 2998 |
| GsuI | CTGGAG | 2 cut(s) | 382, 714 |
| HaeIII | GGCC | 9 cut(s) | 387, 1904, 2018, 2044, 2173, 2265, 2341, 2626, 2812 |
| HapII | CCGG | 4 cut(s) | 133, 1319, 1898, 2792 |
| HgaI | GACGC | 1 cut(s) | 2807 |
| Hin1II | CATG | 9 cut(s) | 467, 1724, 1729, 2378, 2663, 2683, 2773, 2851, 2900 |
| HincII | GTYRAC | 2 cut(s) | 460, 1771 |
| HindII | GTYRAC | 2 cut(s) | 460, 1771 |
| HindIII | AAGCTT | 1 cut(s) | 394 |
| HpaI | GTTAAC | 1 cut(s) | 1771 |
| HpaII | CCGG | 4 cut(s) | 133, 1319, 1898, 2792 |
| HphI | GGTGA | 6 cut(s) | 134, 461, 506, 1124, 2219, 2751 |
| Hpy166II | GTNNAC | 4 cut(s) | 460, 1198, 1553, 1771 |
| Hpy8I | GTNNAC | 4 cut(s) | 460, 1198, 1553, 1771 |
| Hpy99I | CGWCG | 3 cut(s) | 1968, 2271, 2818 |
| HpyCH4III | ACNGT | 9 cut(s) | 370, 681, 925, 1216, 1232, 1384, 2192, 2207, 2244 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 125, 393, 582, 1016, 1636, 2271 |
| Hsp92II | CATG | 9 cut(s) | 467, 1724, 1729, 2378, 2663, 2683, 2773, 2851, 2900 |
| KpnI | GGTACC | 1 cut(s) | 2448 |
| Ksp22I | TGATCA | 1 cut(s) | 2365 |
| KspAI | GTTAAC | 1 cut(s) | 1771 |
| LguI | GCTCTTC | 1 cut(s) | 1335 |
| LmnI | GCTCC | 4 cut(s) | 58, 70, 809, 1861 |
| Lsp1109I | GCAGC | 7 cut(s) | 151, 309, 1003, 1873, 2283, 2317, 2425 |
| MabI | ACCWGGT | 1 cut(s) | 1564 |
| MaeI | CTAG | 7 cut(s) | 105, 308, 1392, 1872, 2118, 2952, 3012 |
| MaeIII | GTNAC | 8 cut(s) | 76, 303, 671, 952, 1226, 1741, 2757, 3014 |
| MfeI | CAATTG | 2 cut(s) | 159, 203 |
| MflI | RGATCY | 7 cut(s) | 357, 733, 1624, 1940, 2527, 2696, 2909 |
| MhlI | GDGCHC | 2 cut(s) | 746, 2726 |
| MlsI | TGGCCA | 1 cut(s) | 387 |
| MluNI | TGGCCA | 1 cut(s) | 387 |
| MlyI | GAGTC | 8 cut(s) | 207, 296, 1259, 1548, 1571, 1691, 1739, 2161 |
| MmeI | TCCRAC | 1 cut(s) | 689 |
| Mox20I | TGGCCA | 1 cut(s) | 387 |
| MscI | TGGCCA | 1 cut(s) | 387 |
| MslI | CAYNNNNRTG | 2 cut(s) | 83, 2774 |
| Msp20I | TGGCCA | 1 cut(s) | 387 |
| MspA1I | CMGCKG | 3 cut(s) | 1886, 2416, 2735 |
| MspI | CCGG | 4 cut(s) | 133, 1319, 1898, 2792 |
| MspR9I | CCNGG | 9 cut(s) | 133, 901, 1028, 1306, 1319, 1320, 1566, 2441, 2793 |
| MunI | CAATTG | 2 cut(s) | 159, 203 |
| Mva1269I | GAATGC | 1 cut(s) | 712 |
| MvaI | CCWGG | 5 cut(s) | 901, 1028, 1306, 1566, 2441 |
| MvnI | CGCG | 1 cut(s) | 2818 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 125, 393, 582, 1016, 1636, 2271 |
| NciI | CCSGG | 4 cut(s) | 133, 1319, 1320, 2793 |
| NlaIII | CATG | 9 cut(s) | 467, 1724, 1729, 2378, 2663, 2683, 2773, 2851, 2900 |
| NlaIV | GGNNCC | 6 cut(s) | 1905, 2017, 2446, 2698, 2885, 3000 |
| NmuCI | GTSAC | 5 cut(s) | 76, 952, 1226, 1741, 2757 |
| NspV | TTCGAA | 1 cut(s) | 1235 |
| PaeR7I | CTCGAG | 1 cut(s) | 60 |
| PagI | TCATGA | 2 cut(s) | 1720, 2769 |
| PciSI | GCTCTTC | 1 cut(s) | 1335 |
| PctI | GAATGC | 1 cut(s) | 712 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2990 |
| PfoI | TCCNGGA | 1 cut(s) | 1304 |
| PinAI | ACCGGT | 1 cut(s) | 1897 |
| PkrI | GCNGC | 7 cut(s) | 166, 324, 1018, 1888, 2273, 2307, 2415 |
| PleI | GAGTC | 8 cut(s) | 207, 295, 1258, 1548, 1571, 1690, 1738, 2160 |
| PpsI | GAGTC | 8 cut(s) | 207, 295, 1258, 1548, 1571, 1690, 1738, 2160 |
| PshBI | ATTAAT | 1 cut(s) | 83 |
| Psp6I | CCWGG | 5 cut(s) | 899, 1026, 1304, 1564, 2439 |
| PspFI | CCCAGC | 2 cut(s) | 2807, 2994 |
| PspGI | CCWGG | 5 cut(s) | 899, 1026, 1304, 1564, 2439 |
| PspN4I | GGNNCC | 6 cut(s) | 1905, 2017, 2446, 2698, 2885, 3000 |
| PspPI | GGNCC | 5 cut(s) | 1903, 2016, 2172, 2624, 2810 |
| PstI | CTGCAG | 1 cut(s) | 2632 |
| PstNI | CAGNNNCTG | 5 cut(s) | 596, 1010, 1889, 1994, 2627 |
| PsuI | RGATCY | 7 cut(s) | 357, 733, 1624, 1940, 2527, 2696, 2909 |
| PvuII | CAGCTG | 3 cut(s) | 1886, 2416, 2735 |
| RsaI | GTAC | 7 cut(s) | 367, 519, 595, 657, 2252, 2446, 2606 |
| RsaNI | GTAC | 7 cut(s) | 366, 518, 594, 656, 2251, 2445, 2605 |
| RseI | CAYNNNNRTG | 2 cut(s) | 83, 2774 |
| SapI | GCTCTTC | 1 cut(s) | 1335 |
| SatI | GCNGC | 7 cut(s) | 165, 323, 1017, 1887, 2272, 2306, 2414 |
| Sau96I | GGNCC | 5 cut(s) | 1903, 2016, 2172, 2624, 2810 |
| ScaI | AGTACT | 1 cut(s) | 367 |
| SchI | GAGTC | 8 cut(s) | 207, 296, 1259, 1548, 1571, 1691, 1739, 2161 |
| ScrFI | CCNGG | 9 cut(s) | 133, 901, 1028, 1306, 1319, 1320, 1566, 2441, 2793 |
| SduI | GDGCHC | 2 cut(s) | 746, 2726 |
| SexAI | ACCWGGT | 1 cut(s) | 1564 |
| SfcI | CTRYAG | 6 cut(s) | 168, 804, 1650, 2010, 2619, 2628 |
| Sfr274I | CTCGAG | 1 cut(s) | 60 |
| SfuI | TTCGAA | 1 cut(s) | 1235 |
| SlaI | CTCGAG | 1 cut(s) | 60 |
| SmaI | CCCGGG | 1 cut(s) | 1320 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 83, 2774 |
| SmlI | CTYRAG | 3 cut(s) | 60, 1737, 1755 |
| SmoI | CTYRAG | 3 cut(s) | 60, 1737, 1755 |
| SsiI | CCGC | 2 cut(s) | 1145, 2522 |
| SspI | AATATT | 1 cut(s) | 1399 |
| SspMI | CTAG | 7 cut(s) | 105, 308, 1392, 1872, 2118, 2952, 3012 |
| StyD4I | CCNGG | 9 cut(s) | 131, 899, 1026, 1304, 1317, 1318, 1564, 2439, 2791 |
| StyI | CCWWGG | 1 cut(s) | 3035 |
| TaaI | ACNGT | 9 cut(s) | 370, 681, 925, 1216, 1232, 1384, 2192, 2207, 2244 |
| TaqI | TCGA | 9 cut(s) | 9, 61, 412, 927, 1235, 1425, 1465, 1966, 2829 |
| TatI | WGTACW | 4 cut(s) | 365, 517, 655, 2250 |
| TscAI | CASTG | 6 cut(s) | 955, 1114, 1179, 1612, 2029, 2637 |
| TseFI | GTSAC | 5 cut(s) | 76, 952, 1226, 1741, 2757 |
| TseI | GCWGC | 7 cut(s) | 164, 322, 1016, 1886, 2271, 2305, 2413 |
| Tsp45I | GTSAC | 5 cut(s) | 76, 952, 1226, 1741, 2757 |
| TspGWI | ACGGA | 2 cut(s) | 784, 2736 |
| TspMI | CCCGGG | 1 cut(s) | 1318 |
| TspRI | CASTG | 6 cut(s) | 955, 1114, 1179, 1612, 2029, 2637 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2990 |
| VspI | ATTAAT | 1 cut(s) | 83 |
| XapI | RAATTY | 6 cut(s) | 250, 544, 1539, 2103, 2224, 2320 |
| XbaI | TCTAGA | 1 cut(s) | 1871 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1723, 2991 |
| XhoI | CTCGAG | 1 cut(s) | 60 |
| XmaI | CCCGGG | 1 cut(s) | 1318 |
| XspI | CTAG | 7 cut(s) | 105, 308, 1392, 1872, 2118, 2952, 3012 |
| ZrmI | AGTACT | 1 cut(s) | 367 |