Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0018135

Physical Location & Seq

Genomic Coordinates Reverse (-)

28304420 .. 28308244

Gene Structure 3825 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00188690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGGCAAAAGATATGGATAACAATCTGCCCCCTTCTGTAGAGTCTTCAACCAATGGATCCGAGGAGCACAAGTCCAAGGATCTCTCAGTTCTTCCTAGTGCTTCTCTGCTCCCAGATGATCCCACAGTTCTACTAACAATTGCTGGAATGCTTCAGTTCAAGCCTATATTCCTTGGCCAGGTTCAAAGACTAGTACCTCGTGCAACAACTTCTCAAAGGTGCATTCGCACTAATGATGTGGAGAATGTAGGTAGAACAGCTCGGCATCATACATTCTTCGAAATGCTTGGCAACTTCAGTTTCGGAGATTACTTCAAGAAGGAAGCAATCCAATGGGCATGGGAGCTTTCGACTGAAGAGTTTGGAATACCAGCTGACAGGTTGTGGGTTAGTGTCTTCGAAGATGACGACGAAGCTTTCGAAATCTGGCATCATGAGGTTGGTGTTCCTGTGGAGCATATCCAGAGAATGGGTGAAGAAGACAACTTTTGGACAAGTGGAGTTACCGGTCCATGCGGTCCATGCTCCGAGATTTATTATGATTTCCATCCTGAGAGGGGATATTTAGATGCAGACCTCAATGATGATACCAGATTTATTGAGTTTTACAATTTGGTTTTTATGGAGTTCAACAAAAAGGTTGATGGTTCACTTGAGCCCTTGAAACAGAAGAACATAGATACCGGACTTGGCCTGGAGCGTATGGCTCGAATCCTTCAGAAGGTCTCAAACAACTATGAAACTGACTTGATCTATCCAATTATAGAGAAGGTCTCAGAATTGGCAAAGGTATCATATAGCCAAGCAAATGAGCAGTCCACACTGAATTTTAAGATTGTCGGAGATCATCTGCGTGCAATTGTGTATCTCATATCAGATGGCGTTGTTCCATCAAATACCAAAAGAGGGTATGTCCTTCGAATGCTTATCAGAAGGGCGGTTCGTGCAGGCAGGTCGCTTGGTCTAAAGGGAGATTGTCAGGGAAACCTTGGAGAAGCAGTTCTACCGGTCATTGCGGGGAAAGTAATTGAGATGAGCAGCCATATTGATCCGGATGTGAAAGATAAAGCAGGCCAAATTCTTGAGGTGTTGCAAAGGGAAGAACTTGTGTTTCTGAAGACATTGTGCAAAGGAGAGAAGAAGCTTCACCAAATGCTAGATGAGGCATTATCGAGAGCGGAGAAAAGTGGGAGTATGCCTTGCTTGTCAGGCAAAGATGCATTTGTGTTGAAAGATACGTATGGATTTCCTGTTGAACAAACAAGAGAAGTGGCTAAAGAACATGGTCGAGCAATCACCGGGAAGTTGGGAGAAGCACGGGGTTTGCTAAAGCGTGACTTTAGCTTTGCCGAGTTGCGAGAGCGTTACCCTTGCTTCGCCGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000049 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004812 GO:0004813 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006412 GO:0006418 GO:0006419 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016020 GO:0016070 GO:0016597 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0031406 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0036094 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

DHHA1 tRNA-synt_2c tRNA_SAD

Protein Analysis

461

Amino Acids

51.95

Weight (kDa)

5.4

Isoelectric Point (pI)

32.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2c	PF01411	25 - 433	1.5e-148	tRNA synthetases class II (A)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018135)

Species	Orthologous Gene IDs
pyrus_communis	pycom05g12680
rosa_chinensis	RchiOBHm_Chr6g0279761
rosa_laevigata	RLG00000013123
rosa_multiflora	Rmu_sc0001719.1_g000017
rosa_roxburghii	Rroxscaffold_7G00188690
rosa_rugosa	Rorug06G0127600
rosa_samantha	Rh6AG236000 Rh6BG240200 Rh6CG242300 Rh6DG233900
rosa_wichuraiana	Rw6G020570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	942
AccB7I	CCANNNNNTGG	1 cut(s)	469
AccBSI	CCGCTC	1 cut(s)	1178
AccIII	TCCGGA	1 cut(s)	1051
AciI	CCGC	4 cut(s)	516, 938, 1016, 1178
AclWI	GGATC	5 cut(s)	51, 64, 87, 113, 1043
AcoI	YGGCCR	1 cut(s)	175
AcsI	RAATTY	2 cut(s)	826, 1077
AcuI	CTGAAG	5 cut(s)	137, 280, 375, 701, 1136
AfaI	GTAC	1 cut(s)	195
AfiI	CCNNNNNNNGG	5 cut(s)	178, 469, 557, 721, 906
AgeI	ACCGGT	2 cut(s)	506, 1006
AgsI	TTSAA	8 cut(s)	48, 160, 185, 316, 631, 664, 1231, 1256
AhlI	ACTAGT	1 cut(s)	190
AjnI	CCWGG	2 cut(s)	177, 693
AloI	GAACNNNNNNTCC	2 cut(s)	984, 1016
AluBI	AGCT	6 cut(s)	260, 346, 374, 416, 1144, 1344
AluI	AGCT	6 cut(s)	260, 346, 374, 416, 1144, 1344
Alw21I	GWGCWC	1 cut(s)	69
Alw26I	GTCTC	2 cut(s)	730, 778
AlwI	GGATC	5 cut(s)	51, 64, 87, 113, 1043
Aor13HI	TCCGGA	1 cut(s)	1051
AoxI	GGCC	3 cut(s)	175, 691, 1072
ApeKI	GCWGC	1 cut(s)	1038
ApoI	RAATTY	2 cut(s)	826, 1077
ArsI	GACNNNNNNTTYG	6 cut(s)	401, 433, 800, 832, 1328, 1360
AsiGI	ACCGGT	2 cut(s)	506, 1006
Asp700I	GAANNNNTTC	1 cut(s)	999
AspS9I	GGNCC	2 cut(s)	509, 518
AsuC2I	CCSGG	1 cut(s)	1300
AsuHPI	GGTGA	3 cut(s)	485, 1139, 1288
AsuII	TTCGAA	4 cut(s)	279, 399, 420, 919
AvaII	GGWCC	2 cut(s)	509, 518
BalI	TGGCCA	1 cut(s)	177
BamHI	GGATCC	1 cut(s)	56
BanII	GRGCYC	1 cut(s)	660
BarI	GAAGNNNNNNTAC	2 cut(s)	987, 1019
BauI	CACGAG	1 cut(s)	198
BbsI	GAAGAC	4 cut(s)	36, 388, 486, 1124
Bbv12I	GWGCWC	1 cut(s)	69
BbvI	GCAGC	1 cut(s)	1050
BccI	CCATC	4 cut(s)	555, 638, 872, 898
BcgI	CGANNNNNNTGC	2 cut(s)	936, 970
BciT130I	CCWGG	2 cut(s)	179, 695
BcnI	CCSGG	1 cut(s)	1300
BcoDI	GTCTC	2 cut(s)	730, 778
BcuI	ACTAGT	1 cut(s)	190
BfaI	CTAG	3 cut(s)	96, 191, 1157
BfmI	CTRYAG	1 cut(s)	36
BfuAI	ACCTGC	1 cut(s)	942
BisI	GCNGC	1 cut(s)	1039
BlsI	GCNGC	1 cut(s)	1040
Bme1390I	CCNGG	3 cut(s)	179, 695, 1300
Bme18I	GGWCC	2 cut(s)	509, 518
BmgT120I	GGNCC	2 cut(s)	509, 518
BmiI	GGNNCC	1 cut(s)	58
BmrFI	CCNGG	3 cut(s)	179, 695, 1300
BmsI	GCATC	4 cut(s)	274, 439, 559, 1207
BpiI	GAAGAC	4 cut(s)	36, 388, 486, 1124
BplI	GAGNNNNNCTC	2 cut(s)	758, 790
BpmI	CTGGAG	1 cut(s)	716
Bpu14I	TTCGAA	4 cut(s)	279, 399, 420, 919
BpuEI	CTTGAG	2 cut(s)	674, 1103
BpuMI	CCSGG	1 cut(s)	1300
BsaAI	YACGTR	1 cut(s)	1239
BsaBI	GATNNNNATC	2 cut(s)	21, 546
BsaI	GGTCTC	2 cut(s)	730, 778
BsaJI	CCNNGG	4 cut(s)	60, 75, 172, 988
BsaWI	WCCGGW	4 cut(s)	506, 683, 1006, 1051
BsaXI	ACNNNNNCTCC	4 cut(s)	56, 86, 984, 1014
Bsc4I	CCNNNNNNNGG	5 cut(s)	178, 469, 557, 721, 906
Bse118I	RCCGGY	3 cut(s)	506, 1006, 1379
Bse3DI	GCAATG	1 cut(s)	1011
Bse8I	GATNNNNATC	2 cut(s)	21, 546
BseAI	TCCGGA	1 cut(s)	1051
BseBI	CCWGG	2 cut(s)	179, 695
BseDI	CCNNGG	4 cut(s)	60, 75, 172, 988
BseGI	GGATG	2 cut(s)	547, 1060
BseJI	GATNNNNATC	2 cut(s)	21, 546
BseLI	CCNNNNNNNGG	5 cut(s)	178, 469, 557, 721, 906
BseMI	GCAATG	1 cut(s)	1011
BseMII	CTCAG	3 cut(s)	99, 543, 789
BseRI	GAGGAG	1 cut(s)	77
BseXI	GCAGC	1 cut(s)	1050
BsgI	GTGCAG	1 cut(s)	966
BshFI	GGCC	3 cut(s)	177, 693, 1074
BshTI	ACCGGT	2 cut(s)	506, 1006
BsiHKAI	GWGCWC	1 cut(s)	69
BsiSI	CCGG	6 cut(s)	507, 684, 1007, 1052, 1299, 1380
BslI	CCNNNNNNNGG	5 cut(s)	178, 469, 557, 721, 906
BsmAI	GTCTC	2 cut(s)	730, 778
BsmI	GAATGC	3 cut(s)	153, 222, 927
BsnI	GGCC	3 cut(s)	177, 693, 1074
Bso31I	GGTCTC	2 cut(s)	730, 778
Bsp119I	TTCGAA	4 cut(s)	279, 399, 420, 919
Bsp1286I	GDGCHC	2 cut(s)	69, 660
Bsp13I	TCCGGA	1 cut(s)	1051
Bsp143I	GATC	6 cut(s)	56, 79, 118, 750, 844, 1048
BspACI	CCGC	4 cut(s)	516, 938, 1016, 1178
BspANI	GGCC	3 cut(s)	177, 693, 1074
BspCNI	CTCAG	3 cut(s)	98, 544, 788
BspEI	TCCGGA	1 cut(s)	1051
BspHI	TCATGA	1 cut(s)	433
BspLI	GGNNCC	1 cut(s)	58
BspMI	ACCTGC	1 cut(s)	942
BspPI	GGATC	5 cut(s)	51, 64, 87, 113, 1043
BspT104I	TTCGAA	4 cut(s)	279, 399, 420, 919
BspTNI	GGTCTC	2 cut(s)	730, 778
BsrBI	CCGCTC	1 cut(s)	1178
BsrDI	GCAATG	1 cut(s)	1011
BsrFI	RCCGGY	3 cut(s)	506, 1006, 1379
BssAI	RCCGGY	3 cut(s)	506, 1006, 1379
BssECI	CCNNGG	4 cut(s)	60, 75, 172, 988
BssMI	GATC	6 cut(s)	56, 79, 118, 750, 844, 1048
BssSI	CACGAG	1 cut(s)	198
BssT1I	CCWWGG	3 cut(s)	75, 172, 988
Bst2BI	CACGAG	1 cut(s)	198
Bst2UI	CCWGG	2 cut(s)	179, 695
Bst4CI	ACNGT	1 cut(s)	127
Bst6I	CTCTTC	1 cut(s)	351
BstBAI	YACGTR	1 cut(s)	1239
BstBI	TTCGAA	4 cut(s)	279, 399, 420, 919
BstC8I	GCNNGC	3 cut(s)	855, 949, 1072
BstDEI	CTNAG	3 cut(s)	85, 552, 775
BstENI	CCTNNNNNAGG	2 cut(s)	176, 719
BstF5I	GGATG	2 cut(s)	547, 1060
BstKTI	GATC	6 cut(s)	59, 82, 121, 753, 847, 1051
BstMAI	GTCTC	2 cut(s)	730, 778
BstMBI	GATC	6 cut(s)	56, 79, 118, 750, 844, 1048
BstMWI	GCNNNNNNNGC	3 cut(s)	522, 944, 1209
BstNI	CCWGG	2 cut(s)	179, 695
BstSCI	CCNGG	3 cut(s)	177, 693, 1298
BstSFI	CTRYAG	1 cut(s)	36
BstSNI	TACGTA	1 cut(s)	1239
BstV1I	GCAGC	1 cut(s)	1050
BstV2I	GAAGAC	4 cut(s)	36, 388, 486, 1124
BstX2I	RGATCY	2 cut(s)	56, 79
BstYI	RGATCY	2 cut(s)	56, 79
BsuRI	GGCC	3 cut(s)	177, 693, 1074
BtsCI	GGATG	2 cut(s)	547, 1060
BtsIMutI	CAGTG	1 cut(s)	821
BveI	ACCTGC	1 cut(s)	942
Cac8I	GCNNGC	3 cut(s)	855, 949, 1072
CciI	TCATGA	1 cut(s)	433
Cfr10I	RCCGGY	3 cut(s)	506, 1006, 1379
Cfr13I	GGNCC	2 cut(s)	509, 518
Csp6I	GTAC	1 cut(s)	194
CspAI	ACCGGT	2 cut(s)	506, 1006
CspCI	CAANNNNNGTGG	2 cut(s)	1251, 1286
CviAII	CATG	5 cut(s)	339, 434, 513, 522, 1283
CviQI	GTAC	1 cut(s)	194
DdeI	CTNAG	3 cut(s)	85, 552, 775
DpnI	GATC	6 cut(s)	58, 81, 120, 752, 846, 1050
DpnII	GATC	6 cut(s)	56, 79, 118, 750, 844, 1048
EaeI	YGGCCR	1 cut(s)	175
Eam1104I	CTCTTC	1 cut(s)	351
EarI	CTCTTC	1 cut(s)	351
Eco105I	TACGTA	1 cut(s)	1239
Eco130I	CCWWGG	3 cut(s)	75, 172, 988
Eco24I	GRGCYC	1 cut(s)	660
Eco31I	GGTCTC	2 cut(s)	730, 778
Eco47I	GGWCC	2 cut(s)	509, 518
Eco57I	CTGAAG	5 cut(s)	137, 280, 375, 701, 1136
EcoNI	CCTNNNNNAGG	2 cut(s)	176, 719
EcoRII	CCWGG	2 cut(s)	177, 693
EcoT14I	CCWWGG	3 cut(s)	75, 172, 988
EcoT22I	ATGCAT	1 cut(s)	1222
EcoT38I	GRGCYC	1 cut(s)	660
ErhI	CCWWGG	3 cut(s)	75, 172, 988
FaeI	CATG	5 cut(s)	342, 437, 516, 525, 1286
FalI	AAGNNNNNCTT	2 cut(s)	1322, 1354
FatI	CATG	5 cut(s)	338, 433, 512, 521, 1282
FauI	CCCGC	1 cut(s)	1009
Fnu4HI	GCNGC	1 cut(s)	1039
FokI	GGATG	2 cut(s)	534, 1067
FriOI	GRGCYC	1 cut(s)	660
Fsp4HI	GCNGC	1 cut(s)	1039
FspBI	CTAG	3 cut(s)	96, 191, 1157
GluI	GCNGC	1 cut(s)	1039
GsuI	CTGGAG	1 cut(s)	716
HaeIII	GGCC	3 cut(s)	177, 693, 1074
HapII	CCGG	6 cut(s)	507, 684, 1007, 1052, 1299, 1380
Hin1II	CATG	5 cut(s)	342, 437, 516, 525, 1286
HindIII	AAGCTT	2 cut(s)	414, 1142
HinfI	GANTC	2 cut(s)	41, 711
HpaII	CCGG	6 cut(s)	507, 684, 1007, 1052, 1299, 1380
HphI	GGTGA	3 cut(s)	485, 1139, 1288
Hpy166II	GTNNAC	2 cut(s)	650, 819
Hpy188I	TCNGA	9 cut(s)	61, 305, 529, 720, 778, 842, 877, 932, 1116
Hpy188III	TCNNGA	7 cut(s)	316, 434, 463, 551, 1052, 1082, 1173
Hpy8I	GTNNAC	2 cut(s)	650, 819
Hpy99I	CGWCG	1 cut(s)	413
HpyAV	CCTTC	7 cut(s)	42, 313, 715, 725, 763, 926, 927
HpyCH4III	ACNGT	1 cut(s)	127
HpyCH4IV	ACGT	1 cut(s)	1238
HpyCH4V	TGCA	8 cut(s)	203, 222, 572, 857, 947, 1093, 1128, 1220
HpyF10VI	GCNNNNNNNGC	3 cut(s)	522, 944, 1209
HpyF3I	CTNAG	3 cut(s)	85, 552, 775
HpySE526I	ACGT	1 cut(s)	1238
Hsp92II	CATG	5 cut(s)	342, 437, 516, 525, 1286
Kpn2I	TCCGGA	1 cut(s)	1051
Kzo9I	GATC	6 cut(s)	56, 79, 118, 750, 844, 1048
LmnI	GCTCC	6 cut(s)	64, 114, 343, 454, 530, 697
Lsp1109I	GCAGC	1 cut(s)	1050
LweI	GCATC	4 cut(s)	274, 439, 559, 1207
MaeI	CTAG	3 cut(s)	96, 191, 1157
MaeII	ACGT	1 cut(s)	1238
MaeIII	GTNAC	3 cut(s)	502, 1334, 1364
MalI	GATC	6 cut(s)	58, 81, 120, 752, 846, 1050
MbiI	CCGCTC	1 cut(s)	1178
MboI	GATC	6 cut(s)	56, 79, 118, 750, 844, 1048
MfeI	CAATTG	2 cut(s)	138, 858
MflI	RGATCY	2 cut(s)	56, 79
MhlI	GDGCHC	2 cut(s)	69, 660
MlsI	TGGCCA	1 cut(s)	177
MluCI	AATT	8 cut(s)	138, 610, 759, 779, 826, 858, 1026, 1077
MluNI	TGGCCA	1 cut(s)	177
MlyI	GAGTC	1 cut(s)	50
MmeI	TCCRAC	1 cut(s)	820
MnlI	CCTC	8 cut(s)	55, 207, 430, 549, 587, 899, 1078, 1156
Mox20I	TGGCCA	1 cut(s)	177
Mph1103I	ATGCAT	1 cut(s)	1222
MroI	TCCGGA	1 cut(s)	1051
MroXI	GAANNNNTTC	1 cut(s)	999
MscI	TGGCCA	1 cut(s)	177
MseI	TTAA	1 cut(s)	831
MslI	CAYNNNNRTG	1 cut(s)	852
Msp20I	TGGCCA	1 cut(s)	177
MspA1I	CMGCKG	1 cut(s)	374
MspI	CCGG	6 cut(s)	507, 684, 1007, 1052, 1299, 1380
MspR9I	CCNGG	3 cut(s)	179, 695, 1300
MunI	CAATTG	2 cut(s)	138, 858
Mva1269I	GAATGC	3 cut(s)	153, 222, 927
MvaI	CCWGG	2 cut(s)	179, 695
MwoI	GCNNNNNNNGC	3 cut(s)	522, 944, 1209
NciI	CCSGG	1 cut(s)	1300
NdeII	GATC	6 cut(s)	56, 79, 118, 750, 844, 1048
NlaIII	CATG	5 cut(s)	342, 437, 516, 525, 1286
NlaIV	GGNNCC	1 cut(s)	58
NmeAIII	GCCGAG	2 cut(s)	241, 1375
NmuCI	GTSAC	1 cut(s)	1334
NsiI	ATGCAT	1 cut(s)	1222
NspV	TTCGAA	4 cut(s)	279, 399, 420, 919
PagI	TCATGA	1 cut(s)	433
PcsI	WCGNNNNNNNCGW	2 cut(s)	405, 417
PctI	GAATGC	3 cut(s)	153, 222, 927
PdmI	GAANNNNTTC	1 cut(s)	999
PfeI	GAWTC	1 cut(s)	711
PflMI	CCANNNNNTGG	1 cut(s)	469
PinAI	ACCGGT	2 cut(s)	506, 1006
PkrI	GCNGC	1 cut(s)	1040
PleI	GAGTC	1 cut(s)	49
PpsI	GAGTC	1 cut(s)	49
Ppu21I	YACGTR	1 cut(s)	1239
Psp6I	CCWGG	2 cut(s)	177, 693
PspGI	CCWGG	2 cut(s)	177, 693
PspN4I	GGNNCC	1 cut(s)	58
PspPI	GGNCC	2 cut(s)	509, 518
PsuI	RGATCY	2 cut(s)	56, 79
PvuII	CAGCTG	1 cut(s)	374
RsaI	GTAC	1 cut(s)	195
RsaNI	GTAC	1 cut(s)	194
RseI	CAYNNNNRTG	1 cut(s)	852
SaqAI	TTAA	1 cut(s)	831
SatI	GCNGC	1 cut(s)	1039
Sau3AI	GATC	6 cut(s)	56, 79, 118, 750, 844, 1048
Sau96I	GGNCC	2 cut(s)	509, 518
SchI	GAGTC	1 cut(s)	50
ScrFI	CCNGG	3 cut(s)	179, 695, 1300
SduI	GDGCHC	2 cut(s)	69, 660
SfaNI	GCATC	4 cut(s)	274, 439, 559, 1207
SfcI	CTRYAG	1 cut(s)	36
SfuI	TTCGAA	4 cut(s)	279, 399, 420, 919
SinI	GGWCC	2 cut(s)	509, 518
SmiMI	CAYNNNNRTG	1 cut(s)	852
SmlI	CTYRAG	2 cut(s)	653, 1082
SmoI	CTYRAG	2 cut(s)	653, 1082
SnaBI	TACGTA	1 cut(s)	1239
SpeI	ACTAGT	1 cut(s)	190
Sse9I	AATT	8 cut(s)	138, 610, 759, 779, 826, 858, 1026, 1077
SsiI	CCGC	4 cut(s)	516, 938, 1016, 1178
SspMI	CTAG	3 cut(s)	96, 191, 1157
StyD4I	CCNGG	3 cut(s)	177, 693, 1298
StyI	CCWWGG	3 cut(s)	75, 172, 988
TaaI	ACNGT	1 cut(s)	127
TaiI	ACGT	1 cut(s)	1241
TaqI	TCGA	8 cut(s)	279, 350, 399, 420, 709, 919, 1172, 1288
TasI	AATT	8 cut(s)	138, 610, 759, 779, 826, 858, 1026, 1077
TfiI	GAWTC	1 cut(s)	711
Tru1I	TTAA	1 cut(s)	831
Tru9I	TTAA	1 cut(s)	831
TscAI	CASTG	1 cut(s)	828
TseFI	GTSAC	1 cut(s)	1334
TseI	GCWGC	1 cut(s)	1038
Tsp45I	GTSAC	1 cut(s)	1334
TspDTI	ATGAA	1 cut(s)	753
TspRI	CASTG	1 cut(s)	828
Van91I	CCANNNNNTGG	1 cut(s)	469
VpaK11BI	GGWCC	2 cut(s)	509, 518
XagI	CCTNNNNNAGG	2 cut(s)	176, 719
XapI	RAATTY	2 cut(s)	826, 1077
XmnI	GAANNNNTTC	1 cut(s)	999
XspI	CTAG	3 cut(s)	96, 191, 1157
Zsp2I	ATGCAT	1 cut(s)	1222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.