Rorug01G0004900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0021642
Physical Location & Seq
Forward (+)
1012788 .. 1017048
4261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0004900.1

Sequence Viewer

Length: 1986 bp
ATGGAACAATATCAAGACGGAGACGGAGACGTAAGGATGAAAGGTGGCGGCACTAGTGGTAGTGGTAGTGGAGAAGAGGTTGAGTCGTGGGGGACGTGGGAGGAGCTCTTGCTAGCATGCGCGGTGAAGCGTCACGGCGTCAAGGACTGGGAGTCGGTGGCCATGGAAGTCCAAGGCAAGACCTCTCTCCCGCAACTCCACACCACCGCCTACAACTGCAAGCGAAAGTATCAGGATCTCCAACGCCGATTCCACCAAAGCCATGACGACCAGGATCCTATCCCTTGGCTCCACCACCTCAAAGACCTACGCCTCGCTCAGCTTCGTCAGGACCTCCATCGCTACGACGTCTCTATCCTGTCGTTGCAGTTGAAGGTGAAGAAGTTAGAGGAAGAAGAGAAAGACGACGACCCCAAACCAGATCTGGAGGAACCGGACTCCAAGGGACGCACCCGCACCAGATCAGAAGAAGAAGAAGACGACAAAAAAACACCGGACGAACCGGACCGGTTCAAACACGAGAACCAGTCGGTGAACGGCTCCAATTCCACCTGCTCCAAAACCCACGAGCACGAGCACGGGGAGGACCACAATCATAAAAAGTCTCCGACTGAACCGGACCCGCTCCCGGCCGGTTCGGCTCAACCCTCCAAAGGCCACTCGGACTCCGACGACGACGACTCGGATAAAGGAAGCTGTGAAACCGTCGCCAAGAAGCGCCGGCGGCGAGAGAGAGGCGCGGCGGCGTCGCGTGAGTCGGAGAGTAGTGAGGCGCAGAGTTCGGCGAGCTTGACGCGGAAACGACGTCGTAAATTGGAATTGGAAGACCAGCCTGACGAACGAGTATTGGGGAAATCACAGCCGTTGGCTGCCACTCTGCAGATGATCCGAGCGCATCAGCATGGCTCATTGTTCCAGCGACGGCTTCCAAGCCAGGAAAGTGACAAGTATACGTGTATGGTCCGGCAGCATGTGGACCTAGAGACGATACAAACAAAGCTCCAAAAGGATTCCTATTCCACGCTCACATTCTACCGGGATCTCCTTCTCCTCTTCTCCAACGCCGTCGTTTTCTTCCCCAAATCCTCAACTGAATCCGTCTCTGCCCACCAACTCCGACGCCTTGTCTTGAACGAAATGAAGAAGAGAAATCTAATCACCAGGCCCGACCCTTCATCTGGGCCGTCAGACTCATTGCCCTCCCAAACAACGATTCCAACAGACTCGTTGCTTGCCAAACACAAGTCAACAGCACCCATTATTGTCTGCCGCAAACGAAGCTCAATCTCATCAAAGCCTTCTACCATTGCTCGTAAGGCTAGTACTACCACTGATCACCCAGCAGCAGAAGCGCCAGCGGCTTTTGATATTAAACCACCCAATAACAGTAAGAAGACCTCTAACTTAAACAATGTAGATGAAGATAATGGATCAAAAGAGAAACCTGTAACTGGAACCAGAAGCTCAAGAAGGACGACAACTACTCATCATCACGACAATAATGCTGGCGCTTCCTCCACCAAGAAAAAAATTGCAAGCCCTGCGGAAACTCCCAAAGCAGGTAAGAAGAGGAAAACCCCTGAGCCAGCGACACCATCAGACAAAAAGAGAAGTGGAGCAGCAGCAGCGGCAGCCGATTTCCTGAAAAGAATAAAGCGTAATTCTCCTGCGCAGCAGAAATTGAAATTGAAAGGTGGGACTGGCTCTAGTACAAGTACTAGAGGTGCAGAGCAGAAGAAGAGGGGAGGTAATAAGGCTGACAAGGTTAAAGGAAGGGTGTCAAGGCAAAGTGGTGGTGAAAATAAGAAACAAGTGAAAGAAGAAAGCAGTCCATCCAAGCGAAGCATAGGAAGACCGTCCAAGAGGGCAGCTGAGACAGCAGCGGCTGCCAATGTAGTTTCACCGAAGCGATCAAGGGAAAATGGGGGGAAGCAGCAGCAGCAGCAAGAAGCTTCTAAGCGGCCCAAAAAACGATCCCGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

661

Amino Acids

73.46

Weight (kDa)

9.72

Isoelectric Point (pI)

67.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 29 - 78 1.3e-06 Myb-like DNA-binding domain
Bromodomain PF00439 295 - 370 6.4e-09 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021642)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0001211.1_g000043
rosa_roxburghii Rroxscaffold_2G00102790 Rroxscaffold_4G00306190
rosa_rugosa Rorug01G0004900
rosa_samantha Rh2AG423900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 560
AatII GACGTC 2 cut(s) 351, 808
Acc16I TGCGCA 1 cut(s) 1671
Acc36I ACCTGC 2 cut(s) 560, 1550
AccBSI CCGCTC 1 cut(s) 625
AccI GTMKAC 1 cut(s) 950
AccII CGCG 4 cut(s) 122, 740, 751, 796
AclWI GGATC 7 cut(s) 243, 269, 282, 880, 1047, 1438, 1968
AcoI YGGCCR 2 cut(s) 159, 630
AcyI GRCGYC 5 cut(s) 138, 348, 746, 805, 1120
AfaI GTAC 3 cut(s) 1324, 1711, 1717
AfiI CCNNNNNNNGG 5 cut(s) 628, 653, 1178, 1451, 1559
AflIII ACRYGT 1 cut(s) 953
AgeI ACCGGT 1 cut(s) 507
AgsI TTSAA 5 cut(s) 373, 514, 1132, 1684, 1690
AhdI GACNNNNNGTC 2 cut(s) 151, 1124
AhlI ACTAGT 1 cut(s) 53
AjiI CACGTC 1 cut(s) 96
AjnI CCWGG 3 cut(s) 270, 933, 1160
AjuI GAANNNNNNNTTGG 2 cut(s) 1197, 1229
AluBI AGCT 9 cut(s) 106, 322, 696, 789, 1000, 1281, 1464, 1871, 1952
AluI AGCT 9 cut(s) 106, 322, 696, 789, 1000, 1281, 1464, 1871, 1952
Alw21I GWGCWC 3 cut(s) 108, 573, 579
Alw26I GTCTC 7 cut(s) 15, 21, 355, 609, 977, 1105, 1868
AlwI GGATC 7 cut(s) 243, 269, 282, 880, 1047, 1438, 1968
AlwNI CAGNNNCTG 1 cut(s) 1886
AoxI GGCC 6 cut(s) 159, 630, 655, 1163, 1181, 1961
AsiGI ACCGGT 1 cut(s) 507
AspLEI GCGC 8 cut(s) 122, 720, 740, 775, 895, 1354, 1511, 1672
AspS9I GGNCC 9 cut(s) 331, 505, 586, 619, 961, 976, 1164, 1181, 1962
AsuC2I CCSGG 2 cut(s) 629, 1037
AsuHPI GGTGA 7 cut(s) 136, 388, 544, 1150, 1328, 1808, 1893
AsuNHI GCTAGC 1 cut(s) 112
AvaII GGWCC 6 cut(s) 331, 505, 586, 619, 961, 976
BalI TGGCCA 1 cut(s) 161
BamHI GGATCC 1 cut(s) 274
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 3 cut(s) 518, 566, 572
BbsI GAAGAC 4 cut(s) 483, 831, 1400, 1858
Bbv12I GWGCWC 3 cut(s) 108, 573, 579
BccI CCATC 3 cut(s) 345, 1603, 1840
BceAI ACGGC 6 cut(s) 151, 553, 847, 938, 1049, 1168
BcgI CGANNNNNNTGC 2 cut(s) 1484, 1518
BciT130I CCWGG 3 cut(s) 272, 935, 1162
BclI TGATCA 1 cut(s) 1333
BcnI CCSGG 2 cut(s) 629, 1037
BcoDI GTCTC 7 cut(s) 15, 21, 355, 609, 977, 1105, 1868
BcuI ACTAGT 1 cut(s) 53
BfaI CTAG 6 cut(s) 54, 113, 980, 1320, 1707, 1719
BfmI CTRYAG 1 cut(s) 878
BfoI RGCGCY 3 cut(s) 721, 1355, 1512
BfuAI ACCTGC 2 cut(s) 560, 1550
BglI GCCNNNNNGGC 1 cut(s) 638
BglII AGATCT 1 cut(s) 421
BlpI GCTNAGC 1 cut(s) 318
BmcAI AGTACT 2 cut(s) 1324, 1717
Bme1390I CCNGG 5 cut(s) 272, 629, 935, 1037, 1162
Bme18I GGWCC 6 cut(s) 331, 505, 586, 619, 961, 976
BmeRI GACNNNNNGTC 2 cut(s) 151, 1124
BmgBI CACGTC 1 cut(s) 96
BmgT120I GGNCC 9 cut(s) 331, 505, 586, 619, 961, 976, 1164, 1181, 1962
BmiI GGNNCC 6 cut(s) 276, 290, 432, 541, 621, 1456
BmrFI CCNGG 5 cut(s) 272, 629, 935, 1037, 1162
BmrI ACTGGG 1 cut(s) 157
BmsI GCATC 1 cut(s) 904
BmtI GCTAGC 1 cut(s) 116
BmuI ACTGGG 1 cut(s) 157
BpiI GAAGAC 4 cut(s) 483, 831, 1400, 1858
BpmI CTGGAG 1 cut(s) 446
Bpu10I CCTNAGC 1 cut(s) 1581
Bpu1102I GCTNAGC 1 cut(s) 318
BpuEI CTTGAG 1 cut(s) 1450
BpuMI CCSGG 2 cut(s) 629, 1037
BsaAI YACGTR 1 cut(s) 954
BsaHI GRCGYC 5 cut(s) 138, 348, 746, 805, 1120
BsaJI CCNNGG 4 cut(s) 162, 172, 284, 441
BsaWI WCCGGW 5 cut(s) 433, 493, 502, 507, 616
BsaXI ACNNNNNCTCC 4 cut(s) 63, 93, 650, 680
Bsc4I CCNNNNNNNGG 5 cut(s) 628, 653, 1178, 1451, 1559
Bse118I RCCGGY 3 cut(s) 507, 632, 720
Bse1I ACTGG 4 cut(s) 152, 526, 1456, 1705
Bse3DI GCAATG 2 cut(s) 1193, 1305
BseBI CCWGG 3 cut(s) 272, 935, 1162
BseDI CCNNGG 4 cut(s) 162, 172, 284, 441
BseGI GGATG 2 cut(s) 42, 1832
BseLI CCNNNNNNNGG 5 cut(s) 628, 653, 1178, 1451, 1559
BseMI GCAATG 2 cut(s) 1193, 1305
BseMII CTCAG 3 cut(s) 332, 1572, 1863
BseNI ACTGG 4 cut(s) 152, 526, 1456, 1705
BseRI GAGGAG 2 cut(s) 116, 1040
BseX3I CGGCCG 1 cut(s) 630
BseYI CCCAGC 1 cut(s) 1339
BsgI GTGCAG 1 cut(s) 1746
Bsh1236I CGCG 4 cut(s) 122, 740, 751, 796
Bsh1285I CGRYCG 1 cut(s) 633
BshFI GGCC 6 cut(s) 161, 632, 657, 1165, 1183, 1963
BshTI ACCGGT 1 cut(s) 507
BsiEI CGRYCG 1 cut(s) 633
BsiHKAI GWGCWC 3 cut(s) 108, 573, 579
BslFI GGGAC 3 cut(s) 106, 459, 1711
BslI CCNNNNNNNGG 5 cut(s) 628, 653, 1178, 1451, 1559
BsmAI GTCTC 7 cut(s) 15, 21, 355, 609, 977, 1105, 1868
BsmBI CGTCTC 5 cut(s) 15, 21, 355, 977, 1105
BsmFI GGGAC 3 cut(s) 106, 459, 1711
BsnI GGCC 6 cut(s) 161, 632, 657, 1165, 1183, 1963
Bsp1286I GDGCHC 3 cut(s) 108, 573, 579
Bsp1720I GCTNAGC 1 cut(s) 318
Bsp19I CCATGG 1 cut(s) 162
BspANI GGCC 6 cut(s) 161, 632, 657, 1165, 1183, 1963
BspCNI CTCAG 3 cut(s) 331, 1573, 1864
BspFNI CGCG 4 cut(s) 122, 740, 751, 796
BspLI GGNNCC 6 cut(s) 276, 290, 432, 541, 621, 1456
BspMAI CTGCAG 1 cut(s) 882
BspMI ACCTGC 2 cut(s) 560, 1550
BspOI GCTAGC 1 cut(s) 116
BspPI GGATC 7 cut(s) 243, 269, 282, 880, 1047, 1438, 1968
BsrBI CCGCTC 1 cut(s) 625
BsrDI GCAATG 2 cut(s) 1193, 1305
BsrFI RCCGGY 3 cut(s) 507, 632, 720
BsrI ACTGG 4 cut(s) 152, 526, 1456, 1705
BssAI RCCGGY 3 cut(s) 507, 632, 720
BssECI CCNNGG 4 cut(s) 162, 172, 284, 441
BssNAI GTATAC 1 cut(s) 951
BssNI GRCGYC 5 cut(s) 138, 348, 746, 805, 1120
BssSI CACGAG 3 cut(s) 518, 566, 572
BssT1I CCWWGG 4 cut(s) 162, 172, 284, 441
Bst1107I GTATAC 1 cut(s) 951
Bst2BI CACGAG 3 cut(s) 518, 566, 572
Bst2UI CCWGG 3 cut(s) 272, 935, 1162
Bst4CI ACNGT 3 cut(s) 706, 1388, 1857
Bst6I CTCTTC 6 cut(s) 69, 390, 1058, 1139, 1562, 1733
BstACI GRCGYC 5 cut(s) 138, 348, 746, 805, 1120
BstAPI GCANNNNNTGC 2 cut(s) 1541, 1886
BstBAI YACGTR 1 cut(s) 954
BstDEI CTNAG 4 cut(s) 318, 1581, 1872, 1956
BstDSI CCRYGG 1 cut(s) 162
BstF5I GGATG 2 cut(s) 42, 1832
BstFNI CGCG 4 cut(s) 122, 740, 751, 796
BstH2I RGCGCY 3 cut(s) 721, 1355, 1512
BstHHI GCGC 8 cut(s) 122, 720, 740, 775, 895, 1354, 1511, 1672
BstMAI GTCTC 7 cut(s) 15, 21, 355, 609, 977, 1105, 1868
BstMCI CGRYCG 1 cut(s) 633
BstNI CCWGG 3 cut(s) 272, 935, 1162
BstNSI RCATGY 2 cut(s) 120, 974
BstSCI CCNGG 5 cut(s) 270, 627, 933, 1035, 1160
BstSFI CTRYAG 1 cut(s) 878
BstUI CGCG 4 cut(s) 122, 740, 751, 796
BstV2I GAAGAC 4 cut(s) 483, 831, 1400, 1858
BstX2I RGATCY 4 cut(s) 235, 274, 421, 1039
BstYI RGATCY 4 cut(s) 235, 274, 421, 1039
BstZ17I GTATAC 1 cut(s) 951
BstZI CGGCCG 1 cut(s) 630
BsuRI GGCC 6 cut(s) 161, 632, 657, 1165, 1183, 1963
BtgI CCRYGG 1 cut(s) 162
BtgZI GCGATG 1 cut(s) 323
BtrI CACGTC 1 cut(s) 96
BtsCI GGATG 2 cut(s) 42, 1832
BtsIMutI CAGTG 1 cut(s) 1329
BveI ACCTGC 2 cut(s) 560, 1550
CaiI CAGNNNCTG 1 cut(s) 1886
CfoI GCGC 8 cut(s) 122, 720, 740, 775, 895, 1354, 1511, 1672
Cfr10I RCCGGY 3 cut(s) 507, 632, 720
Cfr13I GGNCC 9 cut(s) 331, 505, 586, 619, 961, 976, 1164, 1181, 1962
CpoI CGGWCCG 1 cut(s) 505
CseI GACGC 6 cut(s) 119, 127, 456, 735, 802, 1128
Csp6I GTAC 3 cut(s) 1323, 1710, 1716
CspAI ACCGGT 1 cut(s) 507
CspI CGGWCCG 1 cut(s) 505
CviAII CATG 5 cut(s) 117, 163, 263, 902, 971
CviQI GTAC 3 cut(s) 1323, 1710, 1716
DdeI CTNAG 4 cut(s) 318, 1581, 1872, 1956
DriI GACNNNNNGTC 2 cut(s) 151, 1124
EaeI YGGCCR 2 cut(s) 159, 630
EagI CGGCCG 1 cut(s) 630
Eam1104I CTCTTC 6 cut(s) 69, 390, 1058, 1139, 1562, 1733
Eam1105I GACNNNNNGTC 2 cut(s) 151, 1124
EarI CTCTTC 6 cut(s) 69, 390, 1058, 1139, 1562, 1733
Ecl136II GAGCTC 1 cut(s) 106
EclXI CGGCCG 1 cut(s) 630
Eco130I CCWWGG 4 cut(s) 162, 172, 284, 441
Eco24I GRGCYC 1 cut(s) 108
Eco47I GGWCC 6 cut(s) 331, 505, 586, 619, 961, 976
Eco52I CGGCCG 1 cut(s) 630
Eco53kI GAGCTC 1 cut(s) 106
EcoICRI GAGCTC 1 cut(s) 106
EcoO109I RGGNCCY 1 cut(s) 331
EcoRII CCWGG 3 cut(s) 270, 933, 1160
EcoT14I CCWWGG 4 cut(s) 162, 172, 284, 441
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 4 cut(s) 162, 172, 284, 441
Esp3I CGTCTC 5 cut(s) 15, 21, 355, 977, 1105
FaeI CATG 5 cut(s) 120, 166, 266, 905, 974
FaiI YATR 9 cut(s) 118, 164, 264, 597, 903, 951, 959, 972, 1847
FaqI GGGAC 3 cut(s) 106, 459, 1711
FatI CATG 5 cut(s) 116, 162, 262, 901, 970
FauI CCCGC 3 cut(s) 198, 461, 630
FbaI TGATCA 1 cut(s) 1333
FblI GTMKAC 1 cut(s) 950
FokI GGATG 2 cut(s) 49, 1819
FriOI GRGCYC 1 cut(s) 108
FspBI CTAG 6 cut(s) 54, 113, 980, 1320, 1707, 1719
FspI TGCGCA 1 cut(s) 1671
GlaI GCGC 8 cut(s) 121, 719, 739, 774, 894, 1353, 1510, 1671
GsaI CCCAGC 1 cut(s) 1343
GsuI CTGGAG 1 cut(s) 446
HaeII RGCGCY 3 cut(s) 721, 1355, 1512
HaeIII GGCC 6 cut(s) 161, 632, 657, 1165, 1183, 1963
HgaI GACGC 6 cut(s) 119, 127, 456, 735, 802, 1128
HhaI GCGC 8 cut(s) 122, 720, 740, 775, 895, 1354, 1511, 1672
Hin1I GRCGYC 5 cut(s) 138, 348, 746, 805, 1120
Hin1II CATG 5 cut(s) 120, 166, 266, 905, 974
Hin6I GCGC 8 cut(s) 120, 718, 738, 773, 893, 1352, 1509, 1670
HinP1I GCGC 8 cut(s) 120, 718, 738, 773, 893, 1352, 1509, 1670
HincII GTYRAC 1 cut(s) 1248
HindII GTYRAC 1 cut(s) 1248
HindIII AAGCTT 1 cut(s) 1950
HphI GGTGA 7 cut(s) 136, 388, 544, 1150, 1328, 1808, 1893
Hpy166II GTNNAC 4 cut(s) 535, 951, 976, 1248
Hpy188III TCNNGA 9 cut(s) 14, 233, 329, 425, 1129, 1467, 1493, 1642, 1977
Hpy8I GTNNAC 4 cut(s) 535, 951, 976, 1248
HpyAV CCTTC 7 cut(s) 367, 1055, 1182, 1308, 1464, 1767, 1974
HpyCH4III ACNGT 3 cut(s) 706, 1388, 1857
HpyCH4IV ACGT 5 cut(s) 30, 95, 348, 805, 953
HpyCH4V TGCA 5 cut(s) 219, 367, 880, 1535, 1727
HpyF3I CTNAG 4 cut(s) 318, 1581, 1872, 1956
HpySE526I ACGT 5 cut(s) 30, 95, 348, 805, 953
Hsp92I GRCGYC 5 cut(s) 138, 348, 746, 805, 1120
Hsp92II CATG 5 cut(s) 120, 166, 266, 905, 974
HspAI GCGC 8 cut(s) 120, 718, 738, 773, 893, 1352, 1509, 1670
KroI GCCGGC 1 cut(s) 720
KroNI GCCGGC 1 cut(s) 722
Ksp22I TGATCA 1 cut(s) 1333
LmnI GCTCC 7 cut(s) 103, 294, 545, 560, 630, 1005, 1616
LweI GCATC 1 cut(s) 904
MaeI CTAG 6 cut(s) 54, 113, 980, 1320, 1707, 1719
MaeII ACGT 5 cut(s) 30, 95, 348, 805, 953
MaeIII GTNAC 3 cut(s) 131, 941, 1447
MbiI CCGCTC 1 cut(s) 625
MflI RGATCY 4 cut(s) 235, 274, 421, 1039
MhlI GDGCHC 3 cut(s) 108, 573, 579
MlsI TGGCCA 1 cut(s) 161
MluCI AATT 7 cut(s) 544, 812, 818, 1530, 1660, 1679, 1685
MluNI TGGCCA 1 cut(s) 161
MlyI GAGTC 8 cut(s) 92, 161, 431, 659, 674, 764, 1184, 1217
MmeI TCCRAC 7 cut(s) 265, 632, 693, 738, 1083, 1141, 1241
Mox20I TGGCCA 1 cut(s) 161
MreI CGCCGGCG 1 cut(s) 720
MroNI GCCGGC 1 cut(s) 720
MscI TGGCCA 1 cut(s) 161
MseI TTAA 3 cut(s) 1371, 1406, 1767
MslI CAYNNNNRTG 1 cut(s) 900
Msp20I TGGCCA 1 cut(s) 161
MspA1I CMGCKG 4 cut(s) 1358, 1628, 1871, 1883
MspR9I CCNGG 5 cut(s) 272, 629, 935, 1037, 1162
MvaI CCWGG 3 cut(s) 272, 935, 1162
MvnI CGCG 4 cut(s) 122, 740, 751, 796
NaeI GCCGGC 1 cut(s) 722
NciI CCSGG 2 cut(s) 629, 1037
NcoI CCATGG 1 cut(s) 162
NgoMIV GCCGGC 1 cut(s) 720
NheI GCTAGC 1 cut(s) 112
NlaIII CATG 5 cut(s) 120, 166, 266, 905, 974
NlaIV GGNNCC 6 cut(s) 276, 290, 432, 541, 621, 1456
NmuCI GTSAC 2 cut(s) 131, 941
NsbI TGCGCA 1 cut(s) 1671
NspI RCATGY 2 cut(s) 120, 974
PaeI GCATGC 1 cut(s) 120
PaqCI CACCTGC 1 cut(s) 560
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PdiI GCCGGC 1 cut(s) 722
PfeI GAWTC 4 cut(s) 249, 1010, 1094, 1213
PinAI ACCGGT 1 cut(s) 507
PleI GAGTC 8 cut(s) 91, 160, 431, 659, 674, 763, 1184, 1217
PpsI GAGTC 8 cut(s) 91, 160, 431, 659, 674, 763, 1184, 1217
Ppu21I YACGTR 1 cut(s) 954
PpuMI RGGWCCY 1 cut(s) 331
Psp124BI GAGCTC 1 cut(s) 108
Psp5II RGGWCCY 1 cut(s) 331
Psp6I CCWGG 3 cut(s) 270, 933, 1160
PspFI CCCAGC 1 cut(s) 1339
PspGI CCWGG 3 cut(s) 270, 933, 1160
PspN4I GGNNCC 6 cut(s) 276, 290, 432, 541, 621, 1456
PspPI GGNCC 9 cut(s) 331, 505, 586, 619, 961, 976, 1164, 1181, 1962
PspPPI RGGWCCY 1 cut(s) 331
PstI CTGCAG 1 cut(s) 882
PstNI CAGNNNCTG 1 cut(s) 1886
PsuI RGATCY 4 cut(s) 235, 274, 421, 1039
PvuII CAGCTG 1 cut(s) 1871
RsaI GTAC 3 cut(s) 1324, 1711, 1717
RsaNI GTAC 3 cut(s) 1323, 1710, 1716
RseI CAYNNNNRTG 1 cut(s) 900
Rsr2I CGGWCCG 1 cut(s) 505
RsrII CGGWCCG 1 cut(s) 505
SacI GAGCTC 1 cut(s) 108
SaqAI TTAA 3 cut(s) 1371, 1406, 1767
Sau96I GGNCC 9 cut(s) 331, 505, 586, 619, 961, 976, 1164, 1181, 1962
ScaI AGTACT 2 cut(s) 1324, 1717
SchI GAGTC 8 cut(s) 92, 161, 431, 659, 674, 764, 1184, 1217
ScrFI CCNGG 5 cut(s) 272, 629, 935, 1037, 1162
SduI GDGCHC 3 cut(s) 108, 573, 579
SfaNI GCATC 1 cut(s) 904
SfcI CTRYAG 1 cut(s) 878
SgrAI CRCCGGYG 1 cut(s) 720
SinI GGWCC 6 cut(s) 331, 505, 586, 619, 961, 976
SmiMI CAYNNNNRTG 1 cut(s) 900
SmlI CTYRAG 1 cut(s) 1465
SmoI CTYRAG 1 cut(s) 1465
SpeI ACTAGT 1 cut(s) 53
SphI GCATGC 1 cut(s) 120
Sse9I AATT 7 cut(s) 544, 812, 818, 1530, 1660, 1679, 1685
SspMI CTAG 6 cut(s) 54, 113, 980, 1320, 1707, 1719
SstI GAGCTC 1 cut(s) 108
StyD4I CCNGG 5 cut(s) 270, 627, 933, 1035, 1160
StyI CCWWGG 4 cut(s) 162, 172, 284, 441
TaaI ACNGT 3 cut(s) 706, 1388, 1857
TaiI ACGT 5 cut(s) 33, 98, 351, 808, 956
TasI AATT 7 cut(s) 544, 812, 818, 1530, 1660, 1679, 1685
TatI WGTACW 3 cut(s) 1322, 1709, 1715
TauI GCSGC 9 cut(s) 51, 727, 743, 746, 1272, 1361, 1631, 1886, 1963
TfiI GAWTC 4 cut(s) 249, 1010, 1094, 1213
Tru1I TTAA 3 cut(s) 1371, 1406, 1767
Tru9I TTAA 3 cut(s) 1371, 1406, 1767
TscAI CASTG 1 cut(s) 1336
TseFI GTSAC 2 cut(s) 131, 941
Tsp45I GTSAC 2 cut(s) 131, 941
TspDTI ATGAA 4 cut(s) 53, 1154, 1164, 1434
TspGWI ACGGA 3 cut(s) 33, 39, 1087
TspRI CASTG 1 cut(s) 1336
VpaK11BI GGWCC 6 cut(s) 331, 505, 586, 619, 961, 976
XceI RCATGY 2 cut(s) 120, 974
XcmI CCANNNNNNNNNTGG 1 cut(s) 421
XmiI GTMKAC 1 cut(s) 950
XspI CTAG 6 cut(s) 54, 113, 980, 1320, 1707, 1719
ZraI GACGTC 2 cut(s) 349, 806
ZrmI AGTACT 2 cut(s) 1324, 1717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.