Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0001211.1_g000043 |
| rosa_roxburghii | Rroxscaffold_2G00102790 Rroxscaffold_4G00306190 |
| rosa_rugosa | Rorug01G0004900 |
| rosa_samantha | Rh2AG423900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 212 |
| AcuI | CTGAAG | 2 cut(s) | 8, 189 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 56 |
| AgsI | TTSAA | 3 cut(s) | 117, 123, 182 |
| AluBI | AGCT | 1 cut(s) | 19 |
| AluI | AGCT | 1 cut(s) | 19 |
| AlwI | GGATC | 1 cut(s) | 212 |
| AoxI | GGCC | 1 cut(s) | 158 |
| ApeKI | GCWGC | 1 cut(s) | 268 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 186 |
| BbvI | GCAGC | 1 cut(s) | 255 |
| BccI | CCATC | 1 cut(s) | 232 |
| BisI | GCNGC | 1 cut(s) | 269 |
| BlsI | GCNGC | 1 cut(s) | 270 |
| BsaJI | CCNNGG | 1 cut(s) | 10 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 56 |
| Bse1I | ACTGG | 1 cut(s) | 281 |
| BseDI | CCNNGG | 1 cut(s) | 10 |
| BseGI | GGATG | 1 cut(s) | 45 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 56 |
| BseMII | CTCAG | 2 cut(s) | 75, 267 |
| BseNI | ACTGG | 1 cut(s) | 281 |
| BseXI | GCAGC | 1 cut(s) | 255 |
| BshFI | GGCC | 1 cut(s) | 160 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 56 |
| BsnI | GGCC | 1 cut(s) | 160 |
| Bsp143I | GATC | 1 cut(s) | 217 |
| BspANI | GGCC | 1 cut(s) | 160 |
| BspCNI | CTCAG | 2 cut(s) | 76, 268 |
| BspPI | GGATC | 1 cut(s) | 212 |
| BsrI | ACTGG | 1 cut(s) | 281 |
| BssECI | CCNNGG | 1 cut(s) | 10 |
| BssMI | GATC | 1 cut(s) | 217 |
| BstC8I | GCNNGC | 1 cut(s) | 17 |
| BstDEI | CTNAG | 4 cut(s) | 51, 84, 110, 276 |
| BstF5I | GGATG | 1 cut(s) | 45 |
| BstKTI | GATC | 1 cut(s) | 220 |
| BstMBI | GATC | 1 cut(s) | 217 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 12, 277 |
| BstV1I | GCAGC | 1 cut(s) | 255 |
| BstX2I | RGATCY | 1 cut(s) | 217 |
| BstYI | RGATCY | 1 cut(s) | 217 |
| BsuRI | GGCC | 1 cut(s) | 160 |
| BtsCI | GGATG | 1 cut(s) | 45 |
| Cac8I | GCNNGC | 1 cut(s) | 17 |
| CviAII | CATG | 1 cut(s) | 175 |
| CviJI | RGCY | 6 cut(s) | 6, 19, 60, 160, 168, 280 |
| CviKI_1 | RGCY | 6 cut(s) | 6, 19, 60, 160, 168, 280 |
| DdeI | CTNAG | 4 cut(s) | 51, 84, 110, 276 |
| DpnI | GATC | 1 cut(s) | 219 |
| DpnII | GATC | 1 cut(s) | 217 |
| Eco147I | AGGCCT | 1 cut(s) | 160 |
| Eco57I | CTGAAG | 2 cut(s) | 8, 189 |
| FaeI | CATG | 1 cut(s) | 178 |
| FaiI | YATR | 2 cut(s) | 75, 176 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 174, 206 |
| FatI | CATG | 1 cut(s) | 174 |
| Fnu4HI | GCNGC | 1 cut(s) | 269 |
| FokI | GGATG | 1 cut(s) | 32 |
| Fsp4HI | GCNGC | 1 cut(s) | 269 |
| GluI | GCNGC | 1 cut(s) | 269 |
| HaeIII | GGCC | 1 cut(s) | 160 |
| Hin1II | CATG | 1 cut(s) | 178 |
| HindIII | AAGCTT | 1 cut(s) | 17 |
| HinfI | GANTC | 1 cut(s) | 212 |
| Hpy188I | TCNGA | 3 cut(s) | 208, 217, 277 |
| Hpy188III | TCNNGA | 2 cut(s) | 26, 148 |
| HpyAV | CCTTC | 3 cut(s) | 176, 245, 282 |
| HpyCH4V | TGCA | 1 cut(s) | 77 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 12, 277 |
| HpyF3I | CTNAG | 4 cut(s) | 51, 84, 110, 276 |
| Hsp92II | CATG | 1 cut(s) | 178 |
| Kzo9I | GATC | 1 cut(s) | 217 |
| LpnPI | CCDG | 1 cut(s) | 11 |
| Lsp1109I | GCAGC | 1 cut(s) | 255 |
| MalI | GATC | 1 cut(s) | 219 |
| MboI | GATC | 1 cut(s) | 217 |
| MboII | GAAGA | 3 cut(s) | 14, 221, 226 |
| MflI | RGATCY | 1 cut(s) | 217 |
| MluCI | AATT | 1 cut(s) | 29 |
| MnlI | CCTC | 2 cut(s) | 20, 231 |
| MroXI | GAANNNNTTC | 1 cut(s) | 186 |
| MseI | TTAA | 2 cut(s) | 32, 192 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 12, 277 |
| NdeII | GATC | 1 cut(s) | 217 |
| NlaIII | CATG | 1 cut(s) | 178 |
| PceI | AGGCCT | 1 cut(s) | 160 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 99 |
| PdmI | GAANNNNTTC | 1 cut(s) | 186 |
| PfeI | GAWTC | 1 cut(s) | 212 |
| PkrI | GCNGC | 1 cut(s) | 270 |
| PsuI | RGATCY | 1 cut(s) | 217 |
| SaqAI | TTAA | 2 cut(s) | 32, 192 |
| SatI | GCNGC | 1 cut(s) | 269 |
| Sau3AI | GATC | 1 cut(s) | 217 |
| SetI | ASST | 3 cut(s) | 21, 187, 256 |
| Sse9I | AATT | 1 cut(s) | 29 |
| SseBI | AGGCCT | 1 cut(s) | 160 |
| StuI | AGGCCT | 1 cut(s) | 160 |
| TaqI | TCGA | 2 cut(s) | 102, 147 |
| TasI | AATT | 1 cut(s) | 29 |
| TfiI | GAWTC | 1 cut(s) | 212 |
| Tru1I | TTAA | 2 cut(s) | 32, 192 |
| Tru9I | TTAA | 2 cut(s) | 32, 192 |
| TseI | GCWGC | 1 cut(s) | 268 |
| XmnI | GAANNNNTTC | 1 cut(s) | 186 |