Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003607

Physical Location & Seq

Genomic Coordinates Reverse (-)

5851762 .. 5858097

Gene Structure 6336 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0034400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGGGTTCTTCCGGCACTTGTGGGGTTCCCAAACTTATCTGTGTTGTGTTCGTGATATTGTTTCTTGGCTCCTGTGCTTCTTCATCATCTTCCTTGCACCCTTTGGTTGTCCAGTCACAGATTGAACACCTTAACCACACGGCAATATCAGAGTTTAGGTTGCTGAACAGAAAATTTCTTGGCAACTGTCCGAATCCGAGCCCATATCTGCAAATTAGTGTTAGCTCGAGTCCCGGTGGCCTTGGAGATGATGAGTTTGTGACTGTCAATGTTAGAGGCATCTTGAACCCTTCTAAAAATGATTGGGTGGCCATGATTTCACCTGCTAATTCTGATGTCTCAACCTGTCCTTTGAATACGTTTTACTATATACAGACTGGTGATTTTAGTAAACTTCCTCTTCTCTGCCATTATCCTGTTAAGGCAACATACATGAGCACTGATCCTGACTACCTCAGTTGCAAGAAGAAGGAATGCCAAAAGTATCAGAATGGTACCAGTCACTGTGCTATCTCCACCTGCAGTGGTTCGATAACATTTCATGTTATTAACATCAGAACCGACATCGAATTCGTCTTGTTTTCTGGTGGATTTGAGGTCCCTTGCATTTTGAAGAAAGCAAACCCTCTGAAATTTGCCAATCCAAACAAGCCACTGTATGGACATCTCTCGAGCATAGACTCAACTGGAACATCGATGAAATTAACATGGGTCAGTGGAGATGAGAAACCTCAGCAAGTACAATATGGAGATGGAAAATCACAGACTTCAGTAGTTACCACATTTTCACAAGATGACATGCAGAGTTCACCTGCTATACCAAGTCCAGCCAAAGACTTTGGGTGGCATGATCCAGGCTTCATTCATTCAGCAGTGATGACAGGACTTAAGCCTTCATCTAGCTTCTCTTATAGATATGGAAGTGATTCAGTTGGTTGGAGTGATCGAATCCAATTCCGCACCCCCCCTGTGGGAGGATCTGATGAACTCAAATTTCTTGCATTTGGCGACATGGGAAAGGCTCCTCGTGATTCTTCTGTCGAGCATTATATTCAGCCAGGATCCCTCTCAGTGATTAAAGCCGTGACAGATGAAATAAATTCCGGGAATGTAGACTCTGTCTTCCACATTGGAGATATAAGCTATGCCACTGGGTTTTTAGTTGAATGGGATTTTTTCCTTCACCAAATCAACCCTGTTGCTTCTCGAGTTTCATACATGACAGCTATCGGGAACCATGAGAGGGACTATATAGACTCTGGATCAGTGTACGTTCTTGCAGATTCGGGTGGGGAAGTTGGAGTTCCCTATGAGACTTACTTTCCAATGCCAACCCCAGCAAAGGATAAACCATGGTATTCCATAGAACAAGGAAGTGTCCACATCACGATGATTTCAACAGAGCATGACTGGACCAAAAATTCTGAGCAGTATAAATGGATGAAAAAGGACATGGCTTCCGTTGATCGATCTAAAACTCCTTGGTTGATATTTATGGGGCATAGACCAATGTATACATCTGCCCCTGGATTCCTGAGTGTTGATGAAAAATTCGTTGACGAAGTTGAACCATTACTTCTGGCAAGCAAAGTTGATCTGGCCCTGTTTGGTCATGTCCATAACTACGAGCGAACCTGCTCCATTTATAAGAGCCGGTGCATGAAATTGCCTAGCAAAGATGAGGCTGGGATAGACACATATGATCACAGCAACTACAGTGCCCCAGTGCAAGCTATAATTGGAATGGCTGGCTTTTCCTTGGACAAGTTTCCCAGTGGTATTAACAATAGTTGGAGTTTATCAAGGCATTCCGAATATGGTTATCTCAGAGCGCATGCAACAAGGACAGATATCAAATTAGAGTTTGTGAATGCAAACACAAGAAAAGTTGACGACAGCTTCCACATTACAAAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000419 GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0030880 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0055029 GO:0061695 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko04623 ko05016 ko05169 map00230 map00240 map01100 map03020 map04623 map05016 map05169

Pfam Domains

Protein Families

RNA_pol_Rpb5_C RNA_pol_Rpb5_N

Protein Analysis

639

Amino Acids

70.6

Weight (kDa)

6.12

Isoelectric Point (pI)

41.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
fn3_PAP	PF17808	83 - 214	1.5e-35	Fn3-like domain from Purple Acid Phosphatase
Pur_ac_phosph_N	PF16656	220 - 321	7.5e-16	Purple acid Phosphatase, N-terminal domain
Metallophos	PF00149	330 - 542	1.2e-16	Calcineurin-like phosphoesterase
Metallophos_C	PF14008	574 - 633	5.7e-10	Iron/zinc purple acid phosphatase-like protein C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003607)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54490
fragaria_vesca	FvH4_7g02710 FvH4_7g02710 FvH4_7g02710
malus_domestica	MD07G1036700.v1.1
prunus_persica	Prupe.2G032100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0321871 RchiOBHm_Chr1g0321951 RchiOBHm_Chr3g0472601
rosa_laevigata	RLG00000030400 RLG00000030402
rosa_multiflora	Rmu_sc0000427.1_g000005 Rmu_sc0002872.1_g000006 Rmu_sc0003510.1_g000023 Rmu_sc0015497.1_g000006
rosa_roxburghii	Rroxscaffold_4G00327410 Rroxscaffold_4G00327450
rosa_rugosa	Rorug01G0034400
rosa_samantha	Rh1AG047300 Rh1BG045400 Rh1CG051100 Rh1CG051500 Rh1DG055400 Rh1DG055800 Rh2CG536300 Rh3AG178800 Rh3BG204700 Rh3CG202100 Rh3CG224200 Rh5AG112100 Rh6AG330000
rosa_wichuraiana	Rw1G004250 Rw1G004290 Rw1G004310 Rw5G021040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1647
AarI	CACCTGC	3 cut(s)	331, 527, 820
Acc36I	ACCTGC	4 cut(s)	331, 527, 820, 1643
Acc65I	GGTACC	1 cut(s)	494
AccB1I	GGYRCC	1 cut(s)	494
AccB7I	CCANNNNNTGG	1 cut(s)	659
AccI	GTMKAC	2 cut(s)	1113, 1514
AciI	CCGC	1 cut(s)	958
AclWI	GGATC	6 cut(s)	437, 845, 985, 1056, 1069, 1270
AcoI	YGGCCR	1 cut(s)	309
AcsI	RAATTY	7 cut(s)	173, 569, 632, 992, 1099, 1420, 1550
AcuI	CTGAAG	1 cut(s)	753
AfaI	GTAC	3 cut(s)	496, 741, 1271
AfiI	CCNNNNNNNGG	6 cut(s)	659, 970, 971, 974, 1243, 1342
AflII	CTTAAG	1 cut(s)	887
AgsI	TTSAA	7 cut(s)	125, 286, 355, 613, 1166, 1398, 1568
AjnI	CCWGG	3 cut(s)	853, 1057, 1525
AluBI	AGCT	6 cut(s)	225, 903, 1143, 1226, 1733, 1899
AluI	AGCT	6 cut(s)	225, 903, 1143, 1226, 1733, 1899
Alw21I	GWGCWC	1 cut(s)	440
Alw26I	GTCTC	2 cut(s)	343, 1307
AlwI	GGATC	6 cut(s)	437, 845, 985, 1056, 1069, 1270
AlwNI	CAGNNNCTG	1 cut(s)	504
Ama87I	CYCGRG	3 cut(s)	226, 670, 1206
AoxI	GGCC	3 cut(s)	238, 309, 1599
ApoI	RAATTY	7 cut(s)	173, 569, 632, 992, 1099, 1420, 1550
ArsI	GACNNNNNNTTYG	2 cut(s)	554, 586
Asp700I	GAANNNNTTC	1 cut(s)	925
Asp718I	GGTACC	1 cut(s)	494
AspLEI	GCGC	1 cut(s)	1834
AspS9I	GGNCC	3 cut(s)	598, 1413, 1600
AsuC2I	CCSGG	2 cut(s)	234, 1105
AsuHPI	GGTGA	4 cut(s)	312, 392, 801, 1175
AvaI	CYCGRG	3 cut(s)	226, 670, 1206
AvaII	GGWCC	2 cut(s)	598, 1413
BaeGI	GKGCMC	1 cut(s)	1723
BalI	TGGCCA	1 cut(s)	311
BamHI	GGATCC	1 cut(s)	1061
BanI	GGYRCC	1 cut(s)	494
BanII	GRGCYC	1 cut(s)	203
BauI	CACGAG	1 cut(s)	1026
BbsI	GAAGAC	1 cut(s)	1114
Bbv12I	GWGCWC	1 cut(s)	440
BbvCI	CCTCAGC	1 cut(s)	732
BccI	CCATC	1 cut(s)	746
BceAI	ACGGC	2 cut(s)	156, 1067
BciT130I	CCWGG	3 cut(s)	855, 1059, 1527
BclI	TGATCA	1 cut(s)	1702
BcnI	CCSGG	2 cut(s)	234, 1105
BcoDI	GTCTC	2 cut(s)	343, 1307
BfaI	CTAG	2 cut(s)	900, 1671
BfmI	CTRYAG	2 cut(s)	520, 1714
BfrI	CTTAAG	1 cut(s)	887
BfuAI	ACCTGC	4 cut(s)	331, 527, 820, 1643
Bme1390I	CCNGG	5 cut(s)	234, 855, 1059, 1105, 1527
Bme18I	GGWCC	2 cut(s)	598, 1413
BmeT110I	CYCGRG	3 cut(s)	226, 670, 1206
BmgT120I	GGNCC	3 cut(s)	598, 1413, 1600
BmiI	GGNNCC	7 cut(s)	27, 70, 496, 600, 1023, 1063, 1235
BmrFI	CCNGG	5 cut(s)	234, 855, 1059, 1105, 1527
BmrI	ACTGGG	3 cut(s)	1161, 1718, 1767
BmsI	GCATC	1 cut(s)	288
BmuI	ACTGGG	3 cut(s)	1161, 1718, 1767
BpiI	GAAGAC	1 cut(s)	1114
Bpu10I	CCTNAGC	1 cut(s)	732
BpuMI	CCSGG	2 cut(s)	234, 1105
Bsa29I	ATCGAT	2 cut(s)	695, 1468
BsaJI	CCNNGG	5 cut(s)	241, 1352, 1481, 1525, 1758
Bsc4I	CCNNNNNNNGG	6 cut(s)	659, 970, 971, 974, 1243, 1342
Bse118I	RCCGGY	1 cut(s)	1653
Bse1I	ACTGG	8 cut(s)	112, 382, 498, 691, 1156, 1415, 1724, 1773
BseBI	CCWGG	3 cut(s)	855, 1059, 1527
BseCI	ATCGAT	2 cut(s)	695, 1468
BseDI	CCNNGG	5 cut(s)	241, 1352, 1481, 1525, 1758
BseGI	GGATG	1 cut(s)	1446
BseLI	CCNNNNNNNGG	6 cut(s)	659, 970, 971, 974, 1243, 1342
BseMII	CTCAG	6 cut(s)	469, 746, 1083, 1416, 1526, 1840
BseNI	ACTGG	8 cut(s)	112, 382, 498, 691, 1156, 1415, 1724, 1773
BseRI	GAGGAG	1 cut(s)	1014
BseSI	GKGCMC	1 cut(s)	1723
BseYI	CCCAGC	2 cut(s)	1336, 1685
BshFI	GGCC	3 cut(s)	240, 311, 1601
BshNI	GGYRCC	1 cut(s)	494
BshVI	ATCGAT	2 cut(s)	695, 1468
BsiHKAI	GWGCWC	1 cut(s)	440
BsiHKCI	CYCGRG	3 cut(s)	226, 670, 1206
BsiSI	CCGG	4 cut(s)	12, 234, 1104, 1654
BslFI	GGGAC	3 cut(s)	216, 584, 1259
BslI	CCNNNNNNNGG	6 cut(s)	659, 970, 971, 974, 1243, 1342
BsmAI	GTCTC	2 cut(s)	343, 1307
BsmFI	GGGAC	3 cut(s)	216, 584, 1259
BsmI	GAATGC	3 cut(s)	479, 1807, 1876
BsnI	GGCC	3 cut(s)	240, 311, 1601
BsoBI	CYCGRG	3 cut(s)	226, 670, 1206
Bsp1286I	GDGCHC	3 cut(s)	203, 440, 1723
Bsp19I	CCATGG	1 cut(s)	1352
BspACI	CCGC	1 cut(s)	958
BspANI	GGCC	3 cut(s)	240, 311, 1601
BspCNI	CTCAG	6 cut(s)	468, 745, 1082, 1417, 1527, 1839
BspDI	ATCGAT	2 cut(s)	695, 1468
BspLI	GGNNCC	7 cut(s)	27, 70, 496, 600, 1023, 1063, 1235
BspMAI	CTGCAG	1 cut(s)	524
BspMI	ACCTGC	4 cut(s)	331, 527, 820, 1643
BspPI	GGATC	6 cut(s)	437, 845, 985, 1056, 1069, 1270
BspT107I	GGYRCC	1 cut(s)	494
BspTI	CTTAAG	1 cut(s)	887
BsrFI	RCCGGY	1 cut(s)	1653
BsrI	ACTGG	8 cut(s)	112, 382, 498, 691, 1156, 1415, 1724, 1773
BssAI	RCCGGY	1 cut(s)	1653
BssECI	CCNNGG	5 cut(s)	241, 1352, 1481, 1525, 1758
BssNAI	GTATAC	1 cut(s)	1515
BssSI	CACGAG	1 cut(s)	1026
BssT1I	CCWWGG	4 cut(s)	241, 1352, 1481, 1758
Bst1107I	GTATAC	1 cut(s)	1515
Bst2BI	CACGAG	1 cut(s)	1026
Bst2UI	CCWGG	3 cut(s)	855, 1059, 1527
Bst4CI	ACNGT	5 cut(s)	188, 265, 506, 657, 1718
Bst6I	CTCTTC	1 cut(s)	405
BstAFI	CTTAAG	1 cut(s)	887
BstC8I	GCNNGC	4 cut(s)	1585, 1731, 1750, 1836
BstDEI	CTNAG	6 cut(s)	455, 732, 1069, 1425, 1535, 1826
BstDSI	CCRYGG	1 cut(s)	1352
BstENI	CCTNNNNNAGG	1 cut(s)	972
BstF5I	GGATG	1 cut(s)	1446
BstHHI	GCGC	1 cut(s)	1834
BstMAI	GTCTC	2 cut(s)	343, 1307
BstNI	CCWGG	3 cut(s)	855, 1059, 1527
BstNSI	RCATGY	2 cut(s)	802, 1838
BstSCI	CCNGG	5 cut(s)	232, 853, 1057, 1103, 1525
BstSFI	CTRYAG	2 cut(s)	520, 1714
BstSLI	GKGCMC	1 cut(s)	1723
BstV2I	GAAGAC	1 cut(s)	1114
BstX2I	RGATCY	2 cut(s)	977, 1061
BstYI	RGATCY	2 cut(s)	977, 1061
BstZ17I	GTATAC	1 cut(s)	1515
Bsu15I	ATCGAT	2 cut(s)	695, 1468
BsuRI	GGCC	3 cut(s)	240, 311, 1601
BsuTUI	ATCGAT	2 cut(s)	695, 1468
BtgI	CCRYGG	1 cut(s)	1352
BtsCI	GGATG	1 cut(s)	1446
BtsI	GCAGTG	2 cut(s)	529, 879
BveI	ACCTGC	4 cut(s)	331, 527, 820, 1643
Cac8I	GCNNGC	4 cut(s)	1585, 1731, 1750, 1836
CaiI	CAGNNNCTG	1 cut(s)	504
CfoI	GCGC	1 cut(s)	1834
Cfr10I	RCCGGY	1 cut(s)	1653
Cfr13I	GGNCC	3 cut(s)	598, 1413, 1600
ClaI	ATCGAT	2 cut(s)	695, 1468
Csp6I	GTAC	3 cut(s)	495, 740, 1270
CviQI	GTAC	3 cut(s)	495, 740, 1270
DdeI	CTNAG	6 cut(s)	455, 732, 1069, 1425, 1535, 1826
EaeI	YGGCCR	1 cut(s)	309
Eam1104I	CTCTTC	1 cut(s)	405
EarI	CTCTTC	1 cut(s)	405
Eco130I	CCWWGG	4 cut(s)	241, 1352, 1481, 1758
Eco24I	GRGCYC	1 cut(s)	203
Eco32I	GATATC	1 cut(s)	1852
Eco47I	GGWCC	2 cut(s)	598, 1413
Eco57I	CTGAAG	1 cut(s)	753
Eco88I	CYCGRG	3 cut(s)	226, 670, 1206
EcoNI	CCTNNNNNAGG	1 cut(s)	972
EcoO109I	RGGNCCY	1 cut(s)	598
EcoRI	GAATTC	1 cut(s)	569
EcoRII	CCWGG	3 cut(s)	853, 1057, 1525
EcoRV	GATATC	1 cut(s)	1852
EcoT14I	CCWWGG	4 cut(s)	241, 1352, 1481, 1758
EcoT38I	GRGCYC	1 cut(s)	203
ErhI	CCWWGG	4 cut(s)	241, 1352, 1481, 1758
FaqI	GGGAC	3 cut(s)	216, 584, 1259
FauNDI	CATATG	1 cut(s)	1699
FbaI	TGATCA	1 cut(s)	1702
FblI	GTMKAC	2 cut(s)	1113, 1514
FokI	GGATG	1 cut(s)	1453
FriOI	GRGCYC	1 cut(s)	203
FspBI	CTAG	2 cut(s)	900, 1671
GlaI	GCGC	1 cut(s)	1833
GsaI	CCCAGC	2 cut(s)	1340, 1689
HaeIII	GGCC	3 cut(s)	240, 311, 1601
HapII	CCGG	4 cut(s)	12, 234, 1104, 1654
HhaI	GCGC	1 cut(s)	1834
Hin6I	GCGC	1 cut(s)	1832
HinP1I	GCGC	1 cut(s)	1832
HincII	GTYRAC	2 cut(s)	1558, 1891
HindII	GTYRAC	2 cut(s)	1558, 1891
HpaII	CCGG	4 cut(s)	12, 234, 1104, 1654
HphI	GGTGA	4 cut(s)	312, 392, 801, 1175
Hpy166II	GTNNAC	8 cut(s)	392, 809, 1114, 1270, 1381, 1515, 1558, 1891
Hpy8I	GTNNAC	8 cut(s)	392, 809, 1114, 1270, 1381, 1515, 1558, 1891
HpyAV	CCTTC	4 cut(s)	300, 463, 903, 1190
HpyCH4III	ACNGT	5 cut(s)	188, 265, 506, 657, 1718
HpyCH4IV	ACGT	2 cut(s)	359, 1272
HpyF3I	CTNAG	6 cut(s)	455, 732, 1069, 1425, 1535, 1826
HpySE526I	ACGT	2 cut(s)	359, 1272
HspAI	GCGC	1 cut(s)	1832
KpnI	GGTACC	1 cut(s)	498
Ksp22I	TGATCA	1 cut(s)	1702
LmnI	GCTCC	3 cut(s)	74, 1027, 1643
LweI	GCATC	1 cut(s)	288
MaeI	CTAG	2 cut(s)	900, 1671
MaeII	ACGT	2 cut(s)	359, 1272
MaeIII	GTNAC	5 cut(s)	114, 259, 500, 775, 1084
MboII	GAAGA	7 cut(s)	72, 81, 392, 478, 625, 1026, 1114
MflI	RGATCY	2 cut(s)	977, 1061
MhlI	GDGCHC	3 cut(s)	203, 440, 1723
MlsI	TGGCCA	1 cut(s)	311
MluNI	TGGCCA	1 cut(s)	311
MlyI	GAGTC	4 cut(s)	238, 674, 1109, 1250
MmeI	TCCRAC	3 cut(s)	917, 1279, 1772
Mox20I	TGGCCA	1 cut(s)	311
MroXI	GAANNNNTTC	1 cut(s)	925
MscI	TGGCCA	1 cut(s)	311
MseI	TTAA	7 cut(s)	132, 420, 549, 704, 888, 1077, 1782
MslI	CAYNNNNRTG	1 cut(s)	1388
Msp20I	TGGCCA	1 cut(s)	311
MspCI	CTTAAG	1 cut(s)	887
MspI	CCGG	4 cut(s)	12, 234, 1104, 1654
MspR9I	CCNGG	5 cut(s)	234, 855, 1059, 1105, 1527
Mva1269I	GAATGC	3 cut(s)	479, 1807, 1876
MvaI	CCWGG	3 cut(s)	855, 1059, 1527
NciI	CCSGG	2 cut(s)	234, 1105
NcoI	CCATGG	1 cut(s)	1352
NdeI	CATATG	1 cut(s)	1699
NlaIV	GGNNCC	7 cut(s)	27, 70, 496, 600, 1023, 1063, 1235
NmuCI	GTSAC	4 cut(s)	114, 259, 500, 1084
NspI	RCATGY	2 cut(s)	802, 1838
PaeI	GCATGC	1 cut(s)	1838
PaeR7I	CTCGAG	3 cut(s)	226, 670, 1206
PaqCI	CACCTGC	3 cut(s)	331, 527, 820
PctI	GAATGC	3 cut(s)	479, 1807, 1876
PdmI	GAANNNNTTC	1 cut(s)	925
PfeI	GAWTC	6 cut(s)	193, 926, 948, 1031, 1283, 1530
PflFI	GACNNNGTC	1 cut(s)	1118
PflMI	CCANNNNNTGG	1 cut(s)	659
PfoI	TCCNGGA	1 cut(s)	1103
PleI	GAGTC	4 cut(s)	237, 674, 1109, 1250
PpsI	GAGTC	4 cut(s)	237, 674, 1109, 1250
PpuMI	RGGWCCY	1 cut(s)	598
PsiI	TTATAA	1 cut(s)	1647
Psp5II	RGGWCCY	1 cut(s)	598
Psp6I	CCWGG	3 cut(s)	853, 1057, 1525
PspFI	CCCAGC	2 cut(s)	1336, 1685
PspGI	CCWGG	3 cut(s)	853, 1057, 1525
PspN4I	GGNNCC	7 cut(s)	27, 70, 496, 600, 1023, 1063, 1235
PspPI	GGNCC	3 cut(s)	598, 1413, 1600
PspPPI	RGGWCCY	1 cut(s)	598
PspXI	VCTCGAGB	1 cut(s)	226
PstI	CTGCAG	1 cut(s)	524
PstNI	CAGNNNCTG	1 cut(s)	504
PsuI	RGATCY	2 cut(s)	977, 1061
PsyI	GACNNNGTC	1 cut(s)	1118
RsaI	GTAC	3 cut(s)	496, 741, 1271
RsaNI	GTAC	3 cut(s)	495, 740, 1270
RseI	CAYNNNNRTG	1 cut(s)	1388
SaqAI	TTAA	7 cut(s)	132, 420, 549, 704, 888, 1077, 1782
Sau96I	GGNCC	3 cut(s)	598, 1413, 1600
SchI	GAGTC	4 cut(s)	238, 674, 1109, 1250
ScrFI	CCNGG	5 cut(s)	234, 855, 1059, 1105, 1527
SduI	GDGCHC	3 cut(s)	203, 440, 1723
SfaNI	GCATC	1 cut(s)	288
SfcI	CTRYAG	2 cut(s)	520, 1714
Sfr274I	CTCGAG	3 cut(s)	226, 670, 1206
SinI	GGWCC	2 cut(s)	598, 1413
SlaI	CTCGAG	3 cut(s)	226, 670, 1206
SmiMI	CAYNNNNRTG	1 cut(s)	1388
SmlI	CTYRAG	4 cut(s)	226, 670, 887, 1206
SmoI	CTYRAG	4 cut(s)	226, 670, 887, 1206
SphI	GCATGC	1 cut(s)	1838
SsiI	CCGC	1 cut(s)	958
SspMI	CTAG	2 cut(s)	900, 1671
StyD4I	CCNGG	5 cut(s)	232, 853, 1057, 1103, 1525
StyI	CCWWGG	4 cut(s)	241, 1352, 1481, 1758
TaaI	ACNGT	5 cut(s)	188, 265, 506, 657, 1718
TaiI	ACGT	2 cut(s)	362, 1275
TaqI	TCGA	9 cut(s)	227, 530, 567, 671, 695, 946, 1041, 1207, 1468
TatI	WGTACW	1 cut(s)	739
TfiI	GAWTC	6 cut(s)	193, 926, 948, 1031, 1283, 1530
Tru1I	TTAA	7 cut(s)	132, 420, 549, 704, 888, 1077, 1782
Tru9I	TTAA	7 cut(s)	132, 420, 549, 704, 888, 1077, 1782
TseFI	GTSAC	4 cut(s)	114, 259, 500, 1084
Tsp45I	GTSAC	4 cut(s)	114, 259, 500, 1084
TspGWI	ACGGA	1 cut(s)	1450
Tth111I	GACNNNGTC	1 cut(s)	1118
Van91I	CCANNNNNTGG	1 cut(s)	659
Vha464I	CTTAAG	1 cut(s)	887
VpaK11BI	GGWCC	2 cut(s)	598, 1413
XagI	CCTNNNNNAGG	1 cut(s)	972
XapI	RAATTY	7 cut(s)	173, 569, 632, 992, 1099, 1420, 1550
XceI	RCATGY	2 cut(s)	802, 1838
XhoI	CTCGAG	3 cut(s)	226, 670, 1206
XmiI	GTMKAC	2 cut(s)	1113, 1514
XmnI	GAANNNNTTC	1 cut(s)	925
XspI	CTAG	2 cut(s)	900, 1671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.