heat shock factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000027161 |
| rosa_multiflora | Rmu_sc0004093.1_g000001 Rmu_sc0004250.1_g000026 |
| rosa_rugosa | Rorug01G0347100 Rorug01G0347200 Rorug01G0347300 Rorug01G0347400 Rorug01G0347500 Rorug01G0347600 |
| rosa_samantha | Rh1AG354400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 327, 415 |
| AclWI | GGATC | 1 cut(s) | 512 |
| AcsI | RAATTY | 3 cut(s) | 173, 380, 680 |
| AcuI | CTGAAG | 2 cut(s) | 221, 693 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 226, 484, 561 |
| AflIII | ACRYGT | 1 cut(s) | 368 |
| AgsI | TTSAA | 5 cut(s) | 529, 551, 601, 662, 686 |
| AjnI | CCWGG | 2 cut(s) | 15, 483 |
| AluBI | AGCT | 8 cut(s) | 43, 194, 208, 273, 544, 604, 628, 677 |
| AluI | AGCT | 8 cut(s) | 43, 194, 208, 273, 544, 604, 628, 677 |
| Alw21I | GWGCWC | 1 cut(s) | 630 |
| Alw26I | GTCTC | 2 cut(s) | 146, 234 |
| AlwI | GGATC | 1 cut(s) | 512 |
| ApeKI | GCWGC | 2 cut(s) | 205, 425 |
| ApoI | RAATTY | 3 cut(s) | 173, 380, 680 |
| AspS9I | GGNCC | 1 cut(s) | 27 |
| AsuHPI | GGTGA | 1 cut(s) | 649 |
| AvaII | GGWCC | 1 cut(s) | 27 |
| BanII | GRGCYC | 1 cut(s) | 630 |
| Bbv12I | GWGCWC | 1 cut(s) | 630 |
| BbvI | GCAGC | 2 cut(s) | 217, 412 |
| BccI | CCATC | 1 cut(s) | 555 |
| BciT130I | CCWGG | 2 cut(s) | 17, 485 |
| BcoDI | GTCTC | 2 cut(s) | 146, 234 |
| BglII | AGATCT | 1 cut(s) | 68 |
| BisI | GCNGC | 2 cut(s) | 206, 426 |
| BlsI | GCNGC | 2 cut(s) | 207, 427 |
| Bme1390I | CCNGG | 2 cut(s) | 17, 485 |
| Bme18I | GGWCC | 1 cut(s) | 27 |
| BmgT120I | GGNCC | 1 cut(s) | 27 |
| BmiI | GGNNCC | 1 cut(s) | 51 |
| BmrFI | CCNGG | 2 cut(s) | 17, 485 |
| BpuEI | CTTGAG | 3 cut(s) | 277, 419, 614 |
| BsaJI | CCNNGG | 2 cut(s) | 15, 147 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 226, 484, 561 |
| Bse1I | ACTGG | 2 cut(s) | 30, 423 |
| Bse3DI | GCAATG | 1 cut(s) | 460 |
| BseBI | CCWGG | 2 cut(s) | 17, 485 |
| BseDI | CCNNGG | 2 cut(s) | 15, 147 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 226, 484, 561 |
| BseMI | GCAATG | 1 cut(s) | 460 |
| BseMII | CTCAG | 2 cut(s) | 77, 462 |
| BseNI | ACTGG | 2 cut(s) | 30, 423 |
| BseXI | GCAGC | 2 cut(s) | 217, 412 |
| BsiHKAI | GWGCWC | 1 cut(s) | 630 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 226, 484, 561 |
| BsmAI | GTCTC | 2 cut(s) | 146, 234 |
| Bsp1286I | GDGCHC | 1 cut(s) | 630 |
| Bsp143I | GATC | 2 cut(s) | 68, 504 |
| BspCNI | CTCAG | 2 cut(s) | 76, 463 |
| BspLI | GGNNCC | 1 cut(s) | 51 |
| BspPI | GGATC | 1 cut(s) | 512 |
| BsrDI | GCAATG | 1 cut(s) | 460 |
| BsrI | ACTGG | 2 cut(s) | 30, 423 |
| BssECI | CCNNGG | 2 cut(s) | 15, 147 |
| BssMI | GATC | 2 cut(s) | 68, 504 |
| BssNAI | GTATAC | 1 cut(s) | 416 |
| BssT1I | CCWWGG | 1 cut(s) | 147 |
| Bst1107I | GTATAC | 1 cut(s) | 416 |
| Bst2UI | CCWGG | 2 cut(s) | 17, 485 |
| Bst4CI | ACNGT | 3 cut(s) | 216, 353, 586 |
| BstC8I | GCNNGC | 2 cut(s) | 430, 461 |
| BstDEI | CTNAG | 3 cut(s) | 9, 63, 471 |
| BstKTI | GATC | 2 cut(s) | 71, 507 |
| BstMAI | GTCTC | 2 cut(s) | 146, 234 |
| BstMBI | GATC | 2 cut(s) | 68, 504 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 49 |
| BstNI | CCWGG | 2 cut(s) | 17, 485 |
| BstNSI | RCATGY | 1 cut(s) | 372 |
| BstSCI | CCNGG | 2 cut(s) | 15, 483 |
| BstV1I | GCAGC | 2 cut(s) | 217, 412 |
| BstX2I | RGATCY | 2 cut(s) | 68, 504 |
| BstYI | RGATCY | 2 cut(s) | 68, 504 |
| BstZ17I | GTATAC | 1 cut(s) | 416 |
| BtsI | GCAGTG | 1 cut(s) | 658 |
| BtsIMutI | CAGTG | 1 cut(s) | 658 |
| Cac8I | GCNNGC | 2 cut(s) | 430, 461 |
| Cfr13I | GGNCC | 1 cut(s) | 27 |
| CseI | GACGC | 1 cut(s) | 431 |
| CsiI | ACCWGGT | 1 cut(s) | 483 |
| CviAII | CATG | 4 cut(s) | 266, 369, 447, 607 |
| DdeI | CTNAG | 3 cut(s) | 9, 63, 471 |
| DpnI | GATC | 2 cut(s) | 70, 506 |
| DpnII | GATC | 2 cut(s) | 68, 504 |
| Ecl136II | GAGCTC | 1 cut(s) | 628 |
| Eco130I | CCWWGG | 1 cut(s) | 147 |
| Eco24I | GRGCYC | 1 cut(s) | 630 |
| Eco47I | GGWCC | 1 cut(s) | 27 |
| Eco53kI | GAGCTC | 1 cut(s) | 628 |
| Eco57I | CTGAAG | 2 cut(s) | 221, 693 |
| EcoICRI | GAGCTC | 1 cut(s) | 628 |
| EcoRII | CCWGG | 2 cut(s) | 15, 483 |
| EcoT14I | CCWWGG | 1 cut(s) | 147 |
| EcoT38I | GRGCYC | 1 cut(s) | 630 |
| ErhI | CCWWGG | 1 cut(s) | 147 |
| FaeI | CATG | 4 cut(s) | 269, 372, 450, 610 |
| FatI | CATG | 4 cut(s) | 265, 368, 446, 606 |
| FblI | GTMKAC | 2 cut(s) | 327, 415 |
| Fnu4HI | GCNGC | 2 cut(s) | 206, 426 |
| FriOI | GRGCYC | 1 cut(s) | 630 |
| Fsp4HI | GCNGC | 2 cut(s) | 206, 426 |
| GluI | GCNGC | 2 cut(s) | 206, 426 |
| HgaI | GACGC | 1 cut(s) | 431 |
| Hin1II | CATG | 4 cut(s) | 269, 372, 450, 610 |
| HindIII | AAGCTT | 3 cut(s) | 41, 192, 271 |
| HinfI | GANTC | 1 cut(s) | 11 |
| HphI | GGTGA | 1 cut(s) | 649 |
| Hpy166II | GTNNAC | 2 cut(s) | 328, 416 |
| Hpy188I | TCNGA | 4 cut(s) | 66, 201, 263, 357 |
| Hpy188III | TCNNGA | 3 cut(s) | 220, 398, 548 |
| Hpy8I | GTNNAC | 2 cut(s) | 328, 416 |
| HpyAV | CCTTC | 1 cut(s) | 18 |
| HpyCH4III | ACNGT | 3 cut(s) | 216, 353, 586 |
| HpyCH4V | TGCA | 1 cut(s) | 74 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 49 |
| HpyF3I | CTNAG | 3 cut(s) | 9, 63, 471 |
| Hsp92II | CATG | 4 cut(s) | 269, 372, 450, 610 |
| Kzo9I | GATC | 2 cut(s) | 68, 504 |
| LmnI | GCTCC | 4 cut(s) | 49, 164, 450, 625 |
| Lsp1109I | GCAGC | 2 cut(s) | 217, 412 |
| MabI | ACCWGGT | 1 cut(s) | 483 |
| MalI | GATC | 2 cut(s) | 70, 506 |
| MboI | GATC | 2 cut(s) | 68, 504 |
| MboII | GAAGA | 1 cut(s) | 517 |
| MflI | RGATCY | 2 cut(s) | 68, 504 |
| MhlI | GDGCHC | 1 cut(s) | 630 |
| MluCI | AATT | 7 cut(s) | 75, 90, 173, 373, 380, 657, 680 |
| MlyI | GAGTC | 1 cut(s) | 20 |
| MnlI | CCTC | 4 cut(s) | 247, 301, 399, 628 |
| MseI | TTAA | 1 cut(s) | 408 |
| MspR9I | CCNGG | 2 cut(s) | 17, 485 |
| MvaI | CCWGG | 2 cut(s) | 17, 485 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 49 |
| NdeII | GATC | 2 cut(s) | 68, 504 |
| NlaIII | CATG | 4 cut(s) | 269, 372, 450, 610 |
| NlaIV | GGNNCC | 1 cut(s) | 51 |
| NspI | RCATGY | 1 cut(s) | 372 |
| PciI | ACATGT | 1 cut(s) | 368 |
| PkrI | GCNGC | 2 cut(s) | 207, 427 |
| PleI | GAGTC | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 19 |
| PscI | ACATGT | 1 cut(s) | 368 |
| Psp124BI | GAGCTC | 1 cut(s) | 630 |
| Psp6I | CCWGG | 2 cut(s) | 15, 483 |
| PspGI | CCWGG | 2 cut(s) | 15, 483 |
| PspN4I | GGNNCC | 1 cut(s) | 51 |
| PspPI | GGNCC | 1 cut(s) | 27 |
| PsuI | RGATCY | 2 cut(s) | 68, 504 |
| SacI | GAGCTC | 1 cut(s) | 630 |
| SaqAI | TTAA | 1 cut(s) | 408 |
| SatI | GCNGC | 2 cut(s) | 206, 426 |
| Sau3AI | GATC | 2 cut(s) | 68, 504 |
| Sau96I | GGNCC | 1 cut(s) | 27 |
| SchI | GAGTC | 1 cut(s) | 20 |
| ScrFI | CCNGG | 2 cut(s) | 17, 485 |
| SduI | GDGCHC | 1 cut(s) | 630 |
| SexAI | ACCWGGT | 1 cut(s) | 483 |
| SinI | GGWCC | 1 cut(s) | 27 |
| SmlI | CTYRAG | 3 cut(s) | 292, 398, 629 |
| SmoI | CTYRAG | 3 cut(s) | 292, 398, 629 |
| Sse9I | AATT | 7 cut(s) | 75, 90, 173, 373, 380, 657, 680 |
| SstI | GAGCTC | 1 cut(s) | 630 |
| StyD4I | CCNGG | 2 cut(s) | 15, 483 |
| StyI | CCWWGG | 1 cut(s) | 147 |
| TaaI | ACNGT | 3 cut(s) | 216, 353, 586 |
| TasI | AATT | 7 cut(s) | 75, 90, 173, 373, 380, 657, 680 |
| Tru1I | TTAA | 1 cut(s) | 408 |
| Tru9I | TTAA | 1 cut(s) | 408 |
| TscAI | CASTG | 1 cut(s) | 658 |
| TseI | GCWGC | 2 cut(s) | 205, 425 |
| TspDTI | ATGAA | 4 cut(s) | 282, 327, 435, 584 |
| TspGWI | ACGGA | 1 cut(s) | 431 |
| TspRI | CASTG | 1 cut(s) | 658 |
| VpaK11BI | GGWCC | 1 cut(s) | 27 |
| XapI | RAATTY | 3 cut(s) | 173, 380, 680 |
| XceI | RCATGY | 1 cut(s) | 372 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 145 |
| XmiI | GTMKAC | 2 cut(s) | 327, 415 |