Rorug02G0009000

Ras-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0016725
Physical Location & Seq
Forward (+)
732389 .. 737123
4735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0009000.1

Sequence Viewer

Length: 1734 bp
ATGGAATTCAAATTCCGAGCCGTAGACGTATCCGACCGCCCTTCTCCTCCTTCTTCCTCCACCGTCCGATACTTCTCCTCCGAGCGAACAATCCGAGGTCAATCGGTTCTTCCAACTTGGGCCGTCACGCCGAGTTCGGGTCCAAGAAAGAGTCCTGACCCGACTGGTTTTCCGAATCCGGACTATCTCACGATCCACGACCCGATCCTCCACCCGACCAACGCCCGCGACGCCATGCAGCGCCAGATGGAGAAGGACAGGATCAGAGAGGAGATTCTCGCGGCGGAGATGGTGCGGCGGCGAGTTCTTGAAGCCGAGGTGAGGAGAGAGCTCATGTTGGAGCGAGAGATCGCTATGAAGGAAGCCGTCGGAGATGGGCTCGGGTTCGAGGACCCGTTCGGCCCAATGCAGGCCCACTCTTTCGACCATCGCTTCGGGTTTAGCTCGAGGAGTAGTTCGCCGTTGGCTATCGTGCCGCGGCTCCCGGAACCTGTGCCCGATAATAATTTGGAGGTCAACAAGGAGTTGACCCCGCCGGCTCGTCCTCCGGAGCTCAACAAGGACAAGTTGATCGTACTGGCTAAACCCAACCCAGACCTTTCTGGACTGAAGCGGAAAAAACTACCATCAGAGGGTGCTAATGAGATTTATCAATATCGTTTGAAGAAGAAGAAGAAGATACCGGAGGAGGAATTGAAGAAGAAGAAGATACCGAAGGAGGAATGGAGTTGTGCTCTGTGTCAGGTTACTGTAGCAAATGAGAAAATGTTTGACGGTCACCTTAAGGGCAAGAGGCACAAGGCCAGCGAAAAAAGACTTGGAGCTGAAAAACTGGGAAAGAGCTCCAGTAATGCACCACTTTCGAAGAACACTGCAAAACCTTTTGAGCCTAAAGAGTTAGAGACCACTGGTGCTGCAAGCTCACAATTAGGGGCCAAAGAAGAAAGGGGTTTGCTTGACCATAATGAAGCTGGTGATGGTTCAGACAAGAAAATGCAGGATACAGTCACTTCAGAAGAGAAAAAAGTGGAACTGCCAGTGCAGAAAGACCAATGCGGAGAGGATTTGAAGAACAATGTTGAAGTAAAAAAGGTGCACATGATGCAGAGAAAGGAAGAACCAACAAAAACAAAAAAATTTGAGTTCCTATGTGAAATTTGTAAAGTTGGTAGCAATAATCCAAAGGTGATGGAGAAGCATAGTAGGGCGAAGAAGCATATGGATAGGCTTGAGGAACTAAAAACGAATAAAGTTCGAACCACCAACGAAGCAAATGTGAACACTCCCACCACAAAGTCCGTGGCATCATCAGGGGCTATGCAGGAGGCAGTAAAAAGGCTTCAGCAAGATGCAAAGAATAGTGTTGCACCTGCTAATGTGACCAAAGAAGCAAATGCGAGCATTCCAGTCACGATTGCTGTGGCATCATTGAGGGCTACTGAGAAGGCAGAAACTGCTAGGCTGCAGGAATCTGCTAATGTGACCAAAGAAGATGTGAGCATTCCAACAGCAGCAGCCGTGACATCATGGGGAGCTAGTGAGGAGACAGAAACTGCTACGCTGCTTGAGGAATCTATAAAGAATAATACCACTAATGTGACCACAGAAGCAAATGCCAACATGCAAAGCACAACCTCAGTTGCCGTGGAATCATTCTGGTTTACTGAGACGGCTGAAAATTTGAGGAAATTGGAGGCTTATGAAAAGTTGATCAAAGCAAGGTTAACTGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 ko04144 ko04145 ko04962 ko05146 ko05152 map04014 map04144 map04145 map04962 map05146 map05152
Pfam Domains
Protein Families
Ras

Protein Analysis

577

Amino Acids

64.23

Weight (kDa)

8.97

Isoelectric Point (pI)

41.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-met PF12874 242 - 266 2.5e-07 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016725)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04940 FvH4_1g04940 FvH4_1g04940 FvH4_1g04940
malus_domestica MD02G1048000.v1.1
prunus_persica Prupe.7G230200_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0090541 RchiOBHm_Chr2g0111381
rosa_laevigata RLG00000016121
rosa_multiflora Rmu_sc0004514.1_g000028
rosa_roxburghii Rroxscaffold_2G00151040
rosa_rugosa Rorug02G0008900 Rorug02G0009000
rosa_wichuraiana Rw2G004760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1378
Acc36I ACCTGC 1 cut(s) 1378
AccI GTMKAC 1 cut(s) 24
AccII CGCG 3 cut(s) 228, 281, 478
AccIII TCCGGA 2 cut(s) 178, 547
AclWI GGATC 3 cut(s) 187, 199, 269
AcsI RAATTY 5 cut(s) 5, 11, 1136, 1155, 1678
AcuI CTGAAG 3 cut(s) 629, 996, 1325
AcyI GRCGYC 1 cut(s) 231
AfaI GTAC 1 cut(s) 576
AfiI CCNNNNNNNGG 4 cut(s) 137, 321, 409, 632
AflII CTTAAG 1 cut(s) 782
AgsI TTSAA 6 cut(s) 10, 311, 664, 697, 1069, 1082
AjuI GAANNNNNNNTTGG 2 cut(s) 801, 833
AleI CACNNNNGTG 1 cut(s) 1595
AluBI AGCT 8 cut(s) 331, 444, 553, 824, 843, 921, 971, 1535
AluI AGCT 8 cut(s) 331, 444, 553, 824, 843, 921, 971, 1535
Alw21I GWGCWC 5 cut(s) 333, 555, 736, 845, 1098
Alw26I GTCTC 3 cut(s) 896, 1538, 1661
Alw44I GTGCAC 1 cut(s) 1094
AlwI GGATC 3 cut(s) 187, 199, 269
AlwNI CAGNNNCTG 2 cut(s) 1454, 1553
Ama87I CYCGRG 2 cut(s) 380, 445
Aor13HI TCCGGA 2 cut(s) 178, 547
AoxI GGCC 5 cut(s) 120, 400, 411, 801, 933
ApaLI GTGCAC 1 cut(s) 1094
ApeKI GCWGC 6 cut(s) 238, 914, 1462, 1511, 1514, 1561
ApoI RAATTY 5 cut(s) 5, 11, 1136, 1155, 1678
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
AspLEI GCGC 1 cut(s) 243
AspS9I GGNCC 6 cut(s) 120, 140, 391, 401, 412, 933
AsuC2I CCSGG 1 cut(s) 485
AsuHPI GGTGA 4 cut(s) 331, 770, 986, 1198
AsuII TTCGAA 2 cut(s) 863, 1255
AvaI CYCGRG 2 cut(s) 380, 445
AvaII GGWCC 2 cut(s) 140, 391
BaeGI GKGCMC 2 cut(s) 498, 1098
BanII GRGCYC 4 cut(s) 333, 381, 555, 845
BarI GAAGNNNNNNTAC 2 cut(s) 1323, 1355
Bbv12I GWGCWC 5 cut(s) 333, 555, 736, 845, 1098
BbvI GCAGC 6 cut(s) 250, 901, 1449, 1523, 1526, 1548
BccI CCATC 7 cut(s) 241, 283, 368, 435, 634, 971, 1183
BceAI ACGGC 7 cut(s) 5, 107, 350, 445, 1502, 1628, 1686
BcgI CGANNNNNNTGC 2 cut(s) 843, 877
BciVI GTATCC 2 cut(s) 40, 994
BclI TGATCA 1 cut(s) 1710
BcnI CCSGG 1 cut(s) 485
BcoDI GTCTC 3 cut(s) 896, 1538, 1661
BfaI CTAG 2 cut(s) 1458, 1536
BfmI CTRYAG 2 cut(s) 750, 1463
BfoI RGCGCY 1 cut(s) 244
BfrI CTTAAG 1 cut(s) 782
BfuAI ACCTGC 1 cut(s) 1378
BfuI GTATCC 2 cut(s) 40, 994
Bme1390I CCNGG 1 cut(s) 485
Bme18I GGWCC 2 cut(s) 140, 391
BmeT110I CYCGRG 2 cut(s) 380, 445
BmgT120I GGNCC 6 cut(s) 120, 140, 391, 401, 412, 933
BmiI GGNNCC 5 cut(s) 141, 393, 482, 489, 934
BmrFI CCNGG 1 cut(s) 485
BmrI ACTGGG 1 cut(s) 842
BmsI GCATC 4 cut(s) 1092, 1313, 1339, 1433
BmuI ACTGGG 1 cut(s) 842
BplI GAGNNNNNCTC 4 cut(s) 363, 395, 718, 750
BpmI CTGGAG 1 cut(s) 829
Bpu14I TTCGAA 2 cut(s) 863, 1255
BpuEI CTTGAG 2 cut(s) 1250, 1586
BpuMI CCSGG 1 cut(s) 485
BsaHI GRCGYC 1 cut(s) 231
BsaI GGTCTC 1 cut(s) 896
BsaJI CCNNGG 5 cut(s) 94, 315, 476, 1299, 1644
BsaWI WCCGGW 3 cut(s) 178, 547, 682
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bsc4I CCNNNNNNNGG 4 cut(s) 137, 321, 409, 632
Bse118I RCCGGY 1 cut(s) 535
Bse1I ACTGG 8 cut(s) 169, 582, 837, 846, 913, 1037, 1406, 1732
BseAI TCCGGA 2 cut(s) 178, 547
BseDI CCNNGG 5 cut(s) 94, 315, 476, 1299, 1644
BseLI CCNNNNNNNGG 4 cut(s) 137, 321, 409, 632
BseMII CTCAG 3 cut(s) 1431, 1650, 1656
BseNI ACTGG 8 cut(s) 169, 582, 837, 846, 913, 1037, 1406, 1732
BseRI GAGGAG 7 cut(s) 36, 67, 284, 337, 463, 701, 1556
BseSI GKGCMC 2 cut(s) 498, 1098
BseXI GCAGC 6 cut(s) 250, 901, 1449, 1523, 1526, 1548
BsgI GTGCAG 1 cut(s) 1061
Bsh1236I CGCG 3 cut(s) 228, 281, 478
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 5 cut(s) 122, 402, 413, 803, 935
BsiEI CGRYCG 1 cut(s) 37
BsiHKAI GWGCWC 5 cut(s) 333, 555, 736, 845, 1098
BsiHKCI CYCGRG 2 cut(s) 380, 445
BsiSI CCGG 5 cut(s) 179, 485, 536, 548, 683
BslI CCNNNNNNNGG 4 cut(s) 137, 321, 409, 632
BsmAI GTCTC 3 cut(s) 896, 1538, 1661
BsmBI CGTCTC 1 cut(s) 1661
BsmI GAATGC 2 cut(s) 1401, 1500
BsnI GGCC 5 cut(s) 122, 402, 413, 803, 935
Bso31I GGTCTC 1 cut(s) 896
BsoBI CYCGRG 2 cut(s) 380, 445
Bsp119I TTCGAA 2 cut(s) 863, 1255
Bsp1286I GDGCHC 7 cut(s) 333, 381, 498, 555, 736, 845, 1098
Bsp13I TCCGGA 2 cut(s) 178, 547
Bsp143I GATC 6 cut(s) 192, 204, 261, 348, 570, 1710
BspANI GGCC 5 cut(s) 122, 402, 413, 803, 935
BspCNI CTCAG 3 cut(s) 1432, 1649, 1657
BspEI TCCGGA 2 cut(s) 178, 547
BspFNI CGCG 3 cut(s) 228, 281, 478
BspLI GGNNCC 5 cut(s) 141, 393, 482, 489, 934
BspMAI CTGCAG 1 cut(s) 1467
BspMI ACCTGC 1 cut(s) 1378
BspPI GGATC 3 cut(s) 187, 199, 269
BspT104I TTCGAA 2 cut(s) 863, 1255
BspTI CTTAAG 1 cut(s) 782
BspTNI GGTCTC 1 cut(s) 896
BsrFI RCCGGY 1 cut(s) 535
BsrI ACTGG 8 cut(s) 169, 582, 837, 846, 913, 1037, 1406, 1732
BssAI RCCGGY 1 cut(s) 535
BssECI CCNNGG 5 cut(s) 94, 315, 476, 1299, 1644
BssMI GATC 6 cut(s) 192, 204, 261, 348, 570, 1710
BssNI GRCGYC 1 cut(s) 231
Bst4CI ACNGT 4 cut(s) 64, 751, 776, 1006
Bst6I CTCTTC 1 cut(s) 1011
BstACI GRCGYC 1 cut(s) 231
BstAFI CTTAAG 1 cut(s) 782
BstAPI GCANNNNNTGC 2 cut(s) 1102, 1454
BstBI TTCGAA 2 cut(s) 863, 1255
BstC8I GCNNGC 6 cut(s) 226, 411, 537, 805, 919, 1399
BstDEI CTNAG 3 cut(s) 1440, 1636, 1665
BstDSI CCRYGG 3 cut(s) 476, 1299, 1644
BstEII GGTNACC 1 cut(s) 776
BstFNI CGCG 3 cut(s) 228, 281, 478
BstH2I RGCGCY 1 cut(s) 244
BstHHI GCGC 1 cut(s) 243
BstKTI GATC 6 cut(s) 195, 207, 264, 351, 573, 1713
BstMAI GTCTC 3 cut(s) 896, 1538, 1661
BstMBI GATC 6 cut(s) 192, 204, 261, 348, 570, 1710
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 3 cut(s) 230, 1102, 1454
BstNSI RCATGY 1 cut(s) 1624
BstPI GGTNACC 1 cut(s) 776
BstSCI CCNGG 1 cut(s) 483
BstSFI CTRYAG 2 cut(s) 750, 1463
BstSLI GKGCMC 2 cut(s) 498, 1098
BstUI CGCG 3 cut(s) 228, 281, 478
BstV1I GCAGC 6 cut(s) 250, 901, 1449, 1523, 1526, 1548
BsuI GTATCC 2 cut(s) 40, 994
BsuRI GGCC 5 cut(s) 122, 402, 413, 803, 935
BtgI CCRYGG 3 cut(s) 476, 1299, 1644
BtgZI GCGATG 1 cut(s) 413
BtsI GCAGTG 1 cut(s) 870
BtsIMutI CAGTG 3 cut(s) 870, 906, 1044
BveI ACCTGC 1 cut(s) 1378
Cac8I GCNNGC 6 cut(s) 226, 411, 537, 805, 919, 1399
CaiI CAGNNNCTG 2 cut(s) 1454, 1553
CfoI GCGC 1 cut(s) 243
Cfr10I RCCGGY 1 cut(s) 535
Cfr13I GGNCC 6 cut(s) 120, 140, 391, 401, 412, 933
Cfr42I CCGCGG 1 cut(s) 479
CseI GACGC 1 cut(s) 239
Csp6I GTAC 1 cut(s) 575
CspCI CAANNNNNGTGG 2 cut(s) 1281, 1316
CviAII CATG 5 cut(s) 235, 334, 1099, 1527, 1621
CviQI GTAC 1 cut(s) 575
DdeI CTNAG 3 cut(s) 1440, 1636, 1665
DpnI GATC 6 cut(s) 194, 206, 263, 350, 572, 1712
DpnII GATC 6 cut(s) 192, 204, 261, 348, 570, 1710
Eam1104I CTCTTC 1 cut(s) 1011
EarI CTCTTC 1 cut(s) 1011
EciI GGCGGA 1 cut(s) 299
Ecl136II GAGCTC 3 cut(s) 331, 553, 843
Eco24I GRGCYC 4 cut(s) 333, 381, 555, 845
Eco31I GGTCTC 1 cut(s) 896
Eco47I GGWCC 2 cut(s) 140, 391
Eco53kI GAGCTC 3 cut(s) 331, 553, 843
Eco57I CTGAAG 3 cut(s) 629, 996, 1325
Eco88I CYCGRG 2 cut(s) 380, 445
Eco91I GGTNACC 1 cut(s) 776
EcoICRI GAGCTC 3 cut(s) 331, 553, 843
EcoO109I RGGNCCY 1 cut(s) 391
EcoO65I GGTNACC 1 cut(s) 776
EcoRI GAATTC 1 cut(s) 5
EcoT38I GRGCYC 4 cut(s) 333, 381, 555, 845
Esp3I CGTCTC 1 cut(s) 1661
FaeI CATG 5 cut(s) 238, 337, 1102, 1530, 1624
FatI CATG 5 cut(s) 234, 333, 1098, 1526, 1620
FauI CCCGC 2 cut(s) 233, 540
FauNDI CATATG 1 cut(s) 1218
FbaI TGATCA 1 cut(s) 1710
FblI GTMKAC 1 cut(s) 24
FriOI GRGCYC 4 cut(s) 333, 381, 555, 845
FspBI CTAG 2 cut(s) 1458, 1536
GlaI GCGC 1 cut(s) 242
GsuI CTGGAG 1 cut(s) 829
HaeII RGCGCY 1 cut(s) 244
HaeIII GGCC 5 cut(s) 122, 402, 413, 803, 935
HapII CCGG 5 cut(s) 179, 485, 536, 548, 683
HgaI GACGC 1 cut(s) 239
HhaI GCGC 1 cut(s) 243
Hin1I GRCGYC 1 cut(s) 231
Hin1II CATG 5 cut(s) 238, 337, 1102, 1530, 1624
Hin6I GCGC 1 cut(s) 241
HinP1I GCGC 1 cut(s) 241
HincII GTYRAC 3 cut(s) 517, 528, 1725
HindII GTYRAC 3 cut(s) 517, 528, 1725
HinfI GANTC 6 cut(s) 151, 175, 274, 1469, 1571, 1649
HpaI GTTAAC 1 cut(s) 1725
HpaII CCGG 5 cut(s) 179, 485, 536, 548, 683
HphI GGTGA 4 cut(s) 331, 770, 986, 1198
Hpy166II GTNNAC 7 cut(s) 25, 517, 528, 1096, 1279, 1662, 1725
Hpy188III TCNNGA 7 cut(s) 155, 179, 190, 308, 548, 603, 1411
Hpy8I GTNNAC 7 cut(s) 25, 517, 528, 1096, 1279, 1662, 1725
Hpy99I CGWCG 2 cut(s) 233, 371
HpyAV CCTTC 6 cut(s) 51, 60, 247, 352, 709, 1438
HpyCH4III ACNGT 4 cut(s) 64, 751, 776, 1006
HpyCH4IV ACGT 1 cut(s) 27
HpyF10VI GCNNNNNNNGC 3 cut(s) 230, 1102, 1454
HpyF3I CTNAG 3 cut(s) 1440, 1636, 1665
HpySE526I ACGT 1 cut(s) 27
Hsp92I GRCGYC 1 cut(s) 231
Hsp92II CATG 5 cut(s) 238, 337, 1102, 1530, 1624
HspAI GCGC 1 cut(s) 241
Kpn2I TCCGGA 2 cut(s) 178, 547
KroI GCCGGC 1 cut(s) 535
KroNI GCCGGC 1 cut(s) 537
Ksp22I TGATCA 1 cut(s) 1710
KspAI GTTAAC 1 cut(s) 1725
KspI CCGCGG 1 cut(s) 479
Kzo9I GATC 6 cut(s) 192, 204, 261, 348, 570, 1710
LmnI GCTCC 6 cut(s) 340, 486, 550, 821, 848, 1532
Lsp1109I GCAGC 6 cut(s) 250, 901, 1449, 1523, 1526, 1548
LweI GCATC 4 cut(s) 1092, 1313, 1339, 1433
MaeI CTAG 2 cut(s) 1458, 1536
MaeII ACGT 1 cut(s) 27
MaeIII GTNAC 9 cut(s) 124, 745, 776, 1006, 1378, 1408, 1480, 1519, 1597
MalI GATC 6 cut(s) 194, 206, 263, 350, 572, 1712
MboI GATC 6 cut(s) 192, 204, 261, 348, 570, 1710
MhlI GDGCHC 7 cut(s) 333, 381, 498, 555, 736, 845, 1098
MluCI AATT 9 cut(s) 5, 11, 505, 692, 926, 1136, 1155, 1678, 1688
MlyI GAGTC 1 cut(s) 160
MmeI TCCRAC 5 cut(s) 57, 137, 318, 349, 1529
MroI TCCGGA 2 cut(s) 178, 547
MroNI GCCGGC 1 cut(s) 535
MseI TTAA 2 cut(s) 783, 1724
MslI CAYNNNNRTG 1 cut(s) 1595
MspA1I CMGCKG 1 cut(s) 478
MspCI CTTAAG 1 cut(s) 782
MspI CCGG 5 cut(s) 179, 485, 536, 548, 683
MspR9I CCNGG 1 cut(s) 485
Mva1269I GAATGC 2 cut(s) 1401, 1500
MvnI CGCG 3 cut(s) 228, 281, 478
MwoI GCNNNNNNNGC 3 cut(s) 230, 1102, 1454
NaeI GCCGGC 1 cut(s) 537
NciI CCSGG 1 cut(s) 485
NdeI CATATG 1 cut(s) 1218
NdeII GATC 6 cut(s) 192, 204, 261, 348, 570, 1710
NgoMIV GCCGGC 1 cut(s) 535
NlaIII CATG 5 cut(s) 238, 337, 1102, 1530, 1624
NlaIV GGNNCC 5 cut(s) 141, 393, 482, 489, 934
NmeAIII GCCGAG 2 cut(s) 156, 340
NmuCI GTSAC 8 cut(s) 124, 776, 1006, 1378, 1408, 1480, 1519, 1597
NspI RCATGY 1 cut(s) 1624
NspV TTCGAA 2 cut(s) 863, 1255
OliI CACNNNNGTG 1 cut(s) 1595
PaeR7I CTCGAG 1 cut(s) 445
PaqCI CACCTGC 1 cut(s) 1378
PctI GAATGC 2 cut(s) 1401, 1500
PdiI GCCGGC 1 cut(s) 537
PfeI GAWTC 5 cut(s) 175, 274, 1469, 1571, 1649
PfoI TCCNGGA 1 cut(s) 483
PleI GAGTC 1 cut(s) 159
PpsI GAGTC 1 cut(s) 159
PpuMI RGGWCCY 1 cut(s) 391
Psp124BI GAGCTC 3 cut(s) 333, 555, 845
Psp5II RGGWCCY 1 cut(s) 391
PspEI GGTNACC 1 cut(s) 776
PspN4I GGNNCC 5 cut(s) 141, 393, 482, 489, 934
PspPI GGNCC 6 cut(s) 120, 140, 391, 401, 412, 933
PspPPI RGGWCCY 1 cut(s) 391
PspXI VCTCGAGB 1 cut(s) 445
PstI CTGCAG 1 cut(s) 1467
PstNI CAGNNNCTG 2 cut(s) 1454, 1553
RsaI GTAC 1 cut(s) 576
RsaNI GTAC 1 cut(s) 575
RseI CAYNNNNRTG 1 cut(s) 1595
SacI GAGCTC 3 cut(s) 333, 555, 845
SacII CCGCGG 1 cut(s) 479
SaqAI TTAA 2 cut(s) 783, 1724
Sau3AI GATC 6 cut(s) 192, 204, 261, 348, 570, 1710
Sau96I GGNCC 6 cut(s) 120, 140, 391, 401, 412, 933
SchI GAGTC 1 cut(s) 160
ScrFI CCNGG 1 cut(s) 485
SduI GDGCHC 7 cut(s) 333, 381, 498, 555, 736, 845, 1098
SfaNI GCATC 4 cut(s) 1092, 1313, 1339, 1433
SfcI CTRYAG 2 cut(s) 750, 1463
Sfr274I CTCGAG 1 cut(s) 445
Sfr303I CCGCGG 1 cut(s) 479
SfuI TTCGAA 2 cut(s) 863, 1255
SgrBI CCGCGG 1 cut(s) 479
SinI GGWCC 2 cut(s) 140, 391
SlaI CTCGAG 1 cut(s) 445
SmiMI CAYNNNNRTG 1 cut(s) 1595
SmlI CTYRAG 4 cut(s) 445, 782, 1229, 1565
SmoI CTYRAG 4 cut(s) 445, 782, 1229, 1565
Sse9I AATT 9 cut(s) 5, 11, 505, 692, 926, 1136, 1155, 1678, 1688
SspMI CTAG 2 cut(s) 1458, 1536
SstI GAGCTC 3 cut(s) 333, 555, 845
StyD4I CCNGG 1 cut(s) 483
TaaI ACNGT 4 cut(s) 64, 751, 776, 1006
TaiI ACGT 1 cut(s) 30
TaqI TCGA 5 cut(s) 387, 423, 446, 863, 1255
TasI AATT 9 cut(s) 5, 11, 505, 692, 926, 1136, 1155, 1678, 1688
TauI GCSGC 5 cut(s) 284, 298, 301, 478, 481
TfiI GAWTC 5 cut(s) 175, 274, 1469, 1571, 1649
Tru1I TTAA 2 cut(s) 783, 1724
Tru9I TTAA 2 cut(s) 783, 1724
TscAI CASTG 3 cut(s) 877, 913, 1044
TseFI GTSAC 8 cut(s) 124, 776, 1006, 1378, 1408, 1480, 1519, 1597
TseI GCWGC 6 cut(s) 238, 914, 1462, 1511, 1514, 1561
Tsp45I GTSAC 8 cut(s) 124, 776, 1006, 1378, 1408, 1480, 1519, 1597
TspDTI ATGAA 3 cut(s) 371, 981, 1716
TspGWI ACGGA 1 cut(s) 1288
TspRI CASTG 3 cut(s) 877, 913, 1044
Vha464I CTTAAG 1 cut(s) 782
VneI GTGCAC 1 cut(s) 1094
VpaK11BI GGWCC 2 cut(s) 140, 391
XapI RAATTY 5 cut(s) 5, 11, 1136, 1155, 1678
XceI RCATGY 1 cut(s) 1624
XcmI CCANNNNNNNNNTGG 2 cut(s) 968, 1297
XhoI CTCGAG 1 cut(s) 445
XmiI GTMKAC 1 cut(s) 24
XspI CTAG 2 cut(s) 1458, 1536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.