Rorug02G0205800

Protein of unknown function, DUF617

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0016130
Physical Location & Seq
Forward (+)
19288304 .. 19289731
1428 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0205800.1

Sequence Viewer

Length: 1428 bp
ATGGATTCGAGTCTCGTGGCATTGGGGGCTGCAGGGGCTGCAGCGTTTCAGGATGGGAACTGGTACATGGTGGGCCGTTTGTTGGCGCCGAAAGCAAGGTTGCCCGGCTTCAAGGGTACTATTTCCACGATCTGGAATATCAGATCAGGGCTGACCATTCAGGATGCAGGGGAGCGCTTTGTGTTCCAATTTGAGAATGAAGGTGTGCGTAACCGGATCTTGCGTGGAGGTCCCTGGTTTTATCGGAATACTATGCTGGTGGTGGGAGAATATTATGGCCTCAGTCCGGTGGAGGAGGTGCCTCTAAATCTGTTGGAGGCCTGGGTGGCTGTGAAGGGGCTTCCTTTTGCTCTGAGGAACAAGACAGCGCTGGCCATGGTGGGTGCCTCTTTGGGGATGATGGTTCGAGTGGATCACAACGCTTTGAAGAGGAAAGAAGAAGAACAGCGCATCAAGGTGGTGTTTGATGTTCGGCGTCGGATCCGGGTCTGGAAGGTGTTTGAGTTCTCACCTGCGGTGAAATCGGAGTTAACTTTCATCTTCGAGAAGGTTAAAGATTTTTGCCGGGACTGTGGGCTTTTTGTTCATGATGCCACTGGTTGTGACAAGCTCTTAATCCGAGAGAAGGAGGAAATCCAAGCTGAGCCGACGGCAGTTGCCATGGCCGGGTTATCGTTGACCTCGGGGACAGAGACTGGTTTTTTCTTGAAGGACAAGTCTCTGAGGTTGAGCAACGCCGATCTGGAGGTTGGGTCGGGGTCTGTTGGACAAGGTGCCGTGGTGGTAGCTGGTGGGAAGGGCGACCATGCACCGTCGACAACTGTCGAGTTCATGCCTTCCATGTTGTCTGGAATACCTAGGGTTTTGGAACCGGTGACCCACACCATGGGGAACTTGAAGCTGAGGGTTCCAATGCTGGTTGCTCCGCAGGAGATCACCTCGGAGTCCGCGACTTTGATCCCTACGTTATCTGCGACAGGTAACGAGGGTTCAAGAATGGAGTTTTCATCCATGCAATTGGTCCCGGCGGGGAGAAAGAGAAAGGCTACATTTTATTTGGATCGCCTTGGGAAGAAGTACTTAACTTTCCCAAAGTCGAAGCTGGAGGTTGGGGAGAGTGTCTCTTTGATTGTCCAACACAAGAATGGCAAGCTTCTGGTCTCACCAAAGAAGAAGAAAGGTGGTCGTCCTAAGGGAAGCAAAAATAAGATTAAGAATGCTGATGAACAAGAAGTGAAGAAGATACGTAAGTATAAGCGTAGAGGGAAAATTTTGAATTTTGACTCCTCAAGTGAAGCGTTGGATACTGCCACTGTGGAGGAGCTGGGGACTATGCAGATGGGGGAAGATGAGGTTGTGAAGGAGCTCCCTGTTATGGAGGGAGAGCTGGAAGGTGACACGTCACCTTCTAGGGCTAGTTTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF617

Protein Analysis

475

Amino Acids

52.22

Weight (kDa)

9.43

Isoelectric Point (pI)

40.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 21 - 88 2.5e-08 Domain of unknown function (DUF4283)
zf-CCHC_4 PF14392 155 - 203 4.4e-06 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016130)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21990
fragaria_vesca FvH4_1g22210
malus_domestica MD12G1100400.v1.1
prunus_persica Prupe.6G173500_v2.0.a1
pyrus_communis pycom12g09880
rosa_chinensis RchiOBHm_Chr2g0116351
rosa_laevigata RLG00000018261
rosa_multiflora Rmu_sc0015281.1_g000003
rosa_roxburghii Rroxscaffold_2G00127300
rosa_rugosa Rorug02G0205800
rosa_samantha Rh2AG261300 Rh2BG272700 Rh2CG267700 Rh2DG269500
rosa_wichuraiana Rw2G020490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 520
Acc36I ACCTGC 1 cut(s) 520
AccB1I GGYRCC 4 cut(s) 85, 298, 383, 773
AccB7I CCANNNNNTGG 2 cut(s) 132, 886
AccI GTMKAC 1 cut(s) 815
AccII CGCG 1 cut(s) 950
AciI CCGC 4 cut(s) 515, 926, 948, 1028
AclWI GGATC 6 cut(s) 224, 420, 475, 488, 952, 1068
AcoI YGGCCR 2 cut(s) 372, 663
AcsI RAATTY 2 cut(s) 1269, 1276
AcyI GRCGYC 2 cut(s) 86, 475
AfaI GTAC 3 cut(s) 65, 118, 1079
AfeI AGCGCT 2 cut(s) 176, 369
AfiI CCNNNNNNNGG 8 cut(s) 82, 132, 286, 393, 625, 666, 886, 1375
AflIII ACRYGT 1 cut(s) 1398
AgeI ACCGGT 1 cut(s) 871
AgsI TTSAA 6 cut(s) 112, 427, 709, 898, 993, 1276
AjiI CACGTC 1 cut(s) 1401
AjnI CCWGG 2 cut(s) 233, 320
AluBI AGCT 9 cut(s) 610, 641, 788, 901, 1102, 1153, 1324, 1366, 1387
AluI AGCT 9 cut(s) 610, 641, 788, 901, 1102, 1153, 1324, 1366, 1387
Alw21I GWGCWC 1 cut(s) 1368
Alw26I GTCTC 5 cut(s) 17, 686, 723, 1126, 1165
AlwI GGATC 6 cut(s) 224, 420, 475, 488, 952, 1068
AlwNI CAGNNNCTG 2 cut(s) 38, 695
Ama87I CYCGRG 1 cut(s) 682
Aor51HI AGCGCT 2 cut(s) 176, 369
AoxI GGCC 5 cut(s) 73, 277, 318, 372, 663
ApeKI GCWGC 3 cut(s) 29, 38, 41
ApoI RAATTY 2 cut(s) 1269, 1276
AsiGI ACCGGT 1 cut(s) 871
AspA2I CCTAGG 1 cut(s) 857
AspLEI GCGC 4 cut(s) 88, 177, 370, 450
AspS9I GGNCC 3 cut(s) 73, 230, 1021
AsuC2I CCSGG 5 cut(s) 105, 485, 566, 667, 1025
AsuHPI GGTGA 7 cut(s) 501, 529, 886, 928, 1155, 1395, 1406
AvaI CYCGRG 1 cut(s) 682
AvaII GGWCC 2 cut(s) 230, 1021
AvrII CCTAGG 1 cut(s) 857
AxyI CCTNAGG 1 cut(s) 1191
BaeI ACNNNNGTAYC 2 cut(s) 1235, 1268
BalI TGGCCA 1 cut(s) 374
BamHI GGATCC 1 cut(s) 480
BanI GGYRCC 4 cut(s) 85, 298, 383, 773
BanII GRGCYC 1 cut(s) 1368
BauI CACGAG 1 cut(s) 14
Bbv12I GWGCWC 1 cut(s) 1368
BbvCI CCTCAGC 1 cut(s) 902
BbvI GCAGC 3 cut(s) 16, 25, 53
BccI CCATC 3 cut(s) 47, 394, 1333
BceAI ACGGC 3 cut(s) 60, 666, 761
BciT130I CCWGG 2 cut(s) 235, 322
BciVI GTATCC 1 cut(s) 1297
BcnI CCSGG 5 cut(s) 105, 485, 566, 667, 1025
BcoDI GTCTC 5 cut(s) 17, 686, 723, 1126, 1165
BfaI CTAG 3 cut(s) 858, 1410, 1416
BfmI CTRYAG 2 cut(s) 30, 39
BfoI RGCGCY 3 cut(s) 89, 178, 371
BfuAI ACCTGC 1 cut(s) 520
BfuI GTATCC 1 cut(s) 1297
BglI GCCNNNNNGGC 1 cut(s) 326
BisI GCNGC 3 cut(s) 30, 39, 42
BlnI CCTAGG 1 cut(s) 857
BlpI GCTNAGC 1 cut(s) 642
BlsI GCNGC 3 cut(s) 31, 40, 43
BmcAI AGTACT 1 cut(s) 1079
Bme1390I CCNGG 7 cut(s) 105, 235, 322, 485, 566, 667, 1025
Bme18I GGWCC 2 cut(s) 230, 1021
BmeT110I CYCGRG 1 cut(s) 682
BmgBI CACGTC 1 cut(s) 1401
BmgT120I GGNCC 3 cut(s) 73, 230, 1021
BmiI GGNNCC 9 cut(s) 87, 232, 300, 385, 482, 775, 870, 909, 1023
BmrFI CCNGG 7 cut(s) 105, 235, 322, 485, 566, 667, 1025
BmsI GCATC 3 cut(s) 154, 459, 580
BoxI GACNNNNGTC 1 cut(s) 821
BplI GAGNNNNNCTC 4 cut(s) 923, 955, 1106, 1138
BpmI CTGGAG 2 cut(s) 764, 1124
Bpu10I CCTNAGC 1 cut(s) 902
Bpu1102I GCTNAGC 1 cut(s) 642
BpuEI CTTGAG 1 cut(s) 1273
BpuMI CCSGG 5 cut(s) 105, 485, 566, 667, 1025
BsaAI YACGTR 1 cut(s) 1247
BsaHI GRCGYC 2 cut(s) 86, 475
BsaI GGTCTC 1 cut(s) 1165
BsaWI WCCGGW 3 cut(s) 213, 286, 871
BsaXI ACNNNNNCTCC 2 cut(s) 737, 767
Bsc4I CCNNNNNNNGG 8 cut(s) 82, 132, 286, 393, 625, 666, 886, 1375
Bse118I RCCGGY 1 cut(s) 871
Bse1I ACTGG 3 cut(s) 65, 601, 700
Bse21I CCTNAGG 1 cut(s) 1191
BseBI CCWGG 2 cut(s) 235, 322
BseGI GGATG 4 cut(s) 58, 169, 402, 1007
BseLI CCNNNNNNNGG 8 cut(s) 82, 132, 286, 393, 625, 666, 886, 1375
BseMII CTCAG 5 cut(s) 295, 344, 633, 713, 893
BseNI ACTGG 3 cut(s) 65, 601, 700
BseRI GAGGAG 3 cut(s) 308, 1276, 1334
BseXI GCAGC 3 cut(s) 16, 25, 53
BseYI CCCAGC 1 cut(s) 1324
Bsh1236I CGCG 1 cut(s) 950
BshFI GGCC 5 cut(s) 75, 279, 320, 374, 665
BshNI GGYRCC 4 cut(s) 85, 298, 383, 773
BshTI ACCGGT 1 cut(s) 871
BsiHKAI GWGCWC 1 cut(s) 1368
BsiHKCI CYCGRG 1 cut(s) 682
BsiSI CCGG 8 cut(s) 105, 214, 287, 484, 565, 666, 872, 1025
BslFI GGGAC 5 cut(s) 216, 581, 700, 1007, 1342
BslI CCNNNNNNNGG 8 cut(s) 82, 132, 286, 393, 625, 666, 886, 1375
BsmAI GTCTC 5 cut(s) 17, 686, 723, 1126, 1165
BsmFI GGGAC 5 cut(s) 216, 581, 700, 1007, 1342
BsmI GAATGC 1 cut(s) 1222
BsnI GGCC 5 cut(s) 75, 279, 320, 374, 665
Bso31I GGTCTC 1 cut(s) 1165
BsoBI CYCGRG 1 cut(s) 682
Bsp1286I GDGCHC 1 cut(s) 1368
Bsp143I GATC 9 cut(s) 129, 143, 216, 412, 480, 739, 933, 957, 1060
Bsp1720I GCTNAGC 1 cut(s) 642
Bsp19I CCATGG 3 cut(s) 375, 660, 885
BspACI CCGC 4 cut(s) 515, 926, 948, 1028
BspANI GGCC 5 cut(s) 75, 279, 320, 374, 665
BspCNI CTCAG 5 cut(s) 294, 345, 634, 714, 894
BspFNI CGCG 1 cut(s) 950
BspHI TCATGA 1 cut(s) 586
BspLI GGNNCC 9 cut(s) 87, 232, 300, 385, 482, 775, 870, 909, 1023
BspMAI CTGCAG 2 cut(s) 34, 43
BspMI ACCTGC 1 cut(s) 520
BspPI GGATC 6 cut(s) 224, 420, 475, 488, 952, 1068
BspT107I GGYRCC 4 cut(s) 85, 298, 383, 773
BspTNI GGTCTC 1 cut(s) 1165
BsrFI RCCGGY 1 cut(s) 871
BsrI ACTGG 3 cut(s) 65, 601, 700
BssAI RCCGGY 1 cut(s) 871
BssMI GATC 9 cut(s) 129, 143, 216, 412, 480, 739, 933, 957, 1060
BssNI GRCGYC 2 cut(s) 86, 475
BssSI CACGAG 1 cut(s) 14
BssT1I CCWWGG 5 cut(s) 375, 660, 857, 885, 1066
Bst2BI CACGAG 1 cut(s) 14
Bst2UI CCWGG 2 cut(s) 235, 322
Bst4CI ACNGT 4 cut(s) 572, 813, 823, 1315
Bst6I CTCTTC 1 cut(s) 422
BstACI GRCGYC 2 cut(s) 86, 475
BstAPI GCANNNNNTGC 1 cut(s) 38
BstBAI YACGTR 1 cut(s) 1247
BstC8I GCNNGC 2 cut(s) 372, 1151
BstDEI CTNAG 6 cut(s) 281, 353, 642, 722, 902, 1191
BstDSI CCRYGG 4 cut(s) 375, 660, 777, 885
BstEII GGTNACC 1 cut(s) 874
BstF5I GGATG 4 cut(s) 58, 169, 402, 1007
BstFNI CGCG 1 cut(s) 950
BstH2I RGCGCY 3 cut(s) 89, 178, 371
BstHHI GCGC 4 cut(s) 88, 177, 370, 450
BstKTI GATC 9 cut(s) 132, 146, 219, 415, 483, 742, 936, 960, 1063
BstMAI GTCTC 5 cut(s) 17, 686, 723, 1126, 1165
BstMBI GATC 9 cut(s) 129, 143, 216, 412, 480, 739, 933, 957, 1060
BstMWI GCNNNNNNNGC 5 cut(s) 26, 35, 38, 92, 326
BstNI CCWGG 2 cut(s) 235, 322
BstPAI GACNNNNGTC 1 cut(s) 821
BstPI GGTNACC 1 cut(s) 874
BstSCI CCNGG 7 cut(s) 103, 233, 320, 483, 564, 665, 1023
BstSFI CTRYAG 2 cut(s) 30, 39
BstSNI TACGTA 1 cut(s) 1247
BstUI CGCG 1 cut(s) 950
BstV1I GCAGC 3 cut(s) 16, 25, 53
BstX2I RGATCY 2 cut(s) 216, 480
BstXI CCANNNNNNTGG 1 cut(s) 1018
BstYI RGATCY 2 cut(s) 216, 480
Bsu36I CCTNAGG 1 cut(s) 1191
BsuI GTATCC 1 cut(s) 1297
BsuRI GGCC 5 cut(s) 75, 279, 320, 374, 665
BtgI CCRYGG 4 cut(s) 375, 660, 777, 885
BtrI CACGTC 1 cut(s) 1401
BtsCI GGATG 4 cut(s) 58, 169, 402, 1007
BtsIMutI CAGTG 2 cut(s) 594, 1311
BveI ACCTGC 1 cut(s) 520
Cac8I GCNNGC 2 cut(s) 372, 1151
CaiI CAGNNNCTG 2 cut(s) 38, 695
CciI TCATGA 1 cut(s) 586
CfoI GCGC 4 cut(s) 88, 177, 370, 450
Cfr10I RCCGGY 1 cut(s) 871
Cfr13I GGNCC 3 cut(s) 73, 230, 1021
CseI GACGC 1 cut(s) 464
Csp6I GTAC 3 cut(s) 64, 117, 1078
CspAI ACCGGT 1 cut(s) 871
CviAII CATG 9 cut(s) 67, 376, 587, 661, 806, 832, 841, 886, 1012
CviQI GTAC 3 cut(s) 64, 117, 1078
DdeI CTNAG 6 cut(s) 281, 353, 642, 722, 902, 1191
DinI GGCGCC 1 cut(s) 87
DpnI GATC 9 cut(s) 131, 145, 218, 414, 482, 741, 935, 959, 1062
DpnII GATC 9 cut(s) 129, 143, 216, 412, 480, 739, 933, 957, 1060
EaeI YGGCCR 2 cut(s) 372, 663
Eam1104I CTCTTC 1 cut(s) 422
EarI CTCTTC 1 cut(s) 422
Ecl136II GAGCTC 1 cut(s) 1366
Eco105I TACGTA 1 cut(s) 1247
Eco130I CCWWGG 5 cut(s) 375, 660, 857, 885, 1066
Eco147I AGGCCT 1 cut(s) 320
Eco24I GRGCYC 1 cut(s) 1368
Eco31I GGTCTC 1 cut(s) 1165
Eco47I GGWCC 2 cut(s) 230, 1021
Eco47III AGCGCT 2 cut(s) 176, 369
Eco53kI GAGCTC 1 cut(s) 1366
Eco81I CCTNAGG 1 cut(s) 1191
Eco88I CYCGRG 1 cut(s) 682
Eco91I GGTNACC 1 cut(s) 874
EcoICRI GAGCTC 1 cut(s) 1366
EcoO109I RGGNCCY 1 cut(s) 230
EcoO65I GGTNACC 1 cut(s) 874
EcoRII CCWGG 2 cut(s) 233, 320
EcoT14I CCWWGG 5 cut(s) 375, 660, 857, 885, 1066
EcoT38I GRGCYC 1 cut(s) 1368
EgeI GGCGCC 1 cut(s) 87
EheI GGCGCC 1 cut(s) 87
ErhI CCWWGG 5 cut(s) 375, 660, 857, 885, 1066
FaeI CATG 9 cut(s) 70, 379, 590, 664, 809, 835, 844, 889, 1015
FalI AAGNNNNNCTT 2 cut(s) 1064, 1096
FaqI GGGAC 5 cut(s) 216, 581, 700, 1007, 1342
FatI CATG 9 cut(s) 66, 375, 586, 660, 805, 831, 840, 885, 1011
FauI CCCGC 1 cut(s) 1021
FblI GTMKAC 1 cut(s) 815
Fnu4HI GCNGC 3 cut(s) 30, 39, 42
FokI GGATG 4 cut(s) 65, 176, 409, 994
FriOI GRGCYC 1 cut(s) 1368
Fsp4HI GCNGC 3 cut(s) 30, 39, 42
FspBI CTAG 3 cut(s) 858, 1410, 1416
GlaI GCGC 4 cut(s) 87, 176, 369, 449
GluI GCNGC 3 cut(s) 30, 39, 42
GsaI CCCAGC 1 cut(s) 1328
GsuI CTGGAG 2 cut(s) 764, 1124
HaeII RGCGCY 3 cut(s) 89, 178, 371
HaeIII GGCC 5 cut(s) 75, 279, 320, 374, 665
HapII CCGG 8 cut(s) 105, 214, 287, 484, 565, 666, 872, 1025
HgaI GACGC 1 cut(s) 464
HhaI GCGC 4 cut(s) 88, 177, 370, 450
Hin1I GRCGYC 2 cut(s) 86, 475
Hin1II CATG 9 cut(s) 70, 379, 590, 664, 809, 835, 844, 889, 1015
Hin6I GCGC 4 cut(s) 86, 175, 368, 448
HinP1I GCGC 4 cut(s) 86, 175, 368, 448
HincII GTYRAC 3 cut(s) 531, 678, 816
HindII GTYRAC 3 cut(s) 531, 678, 816
HindIII AAGCTT 1 cut(s) 1151
HinfI GANTC 4 cut(s) 5, 10, 944, 1283
HpaI GTTAAC 1 cut(s) 531
HpaII CCGG 8 cut(s) 105, 214, 287, 484, 565, 666, 872, 1025
HphI GGTGA 7 cut(s) 501, 529, 886, 928, 1155, 1395, 1406
Hpy166II GTNNAC 3 cut(s) 531, 678, 816
Hpy188I TCNGA 8 cut(s) 143, 246, 354, 480, 526, 620, 723, 943
Hpy8I GTNNAC 3 cut(s) 531, 678, 816
Hpy99I CGWCG 3 cut(s) 480, 652, 817
HpyCH4III ACNGT 4 cut(s) 572, 813, 823, 1315
HpyCH4IV ACGT 3 cut(s) 965, 1246, 1400
HpyCH4V TGCA 6 cut(s) 32, 41, 167, 809, 1015, 1336
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 35, 38, 92, 326
HpyF3I CTNAG 6 cut(s) 281, 353, 642, 722, 902, 1191
HpySE526I ACGT 3 cut(s) 965, 1246, 1400
Hsp92I GRCGYC 2 cut(s) 86, 475
Hsp92II CATG 9 cut(s) 70, 379, 590, 664, 809, 835, 844, 889, 1015
HspAI GCGC 4 cut(s) 86, 175, 368, 448
KasI GGCGCC 1 cut(s) 85
KspAI GTTAAC 1 cut(s) 531
Kzo9I GATC 9 cut(s) 129, 143, 216, 412, 480, 739, 933, 957, 1060
LmnI GCTCC 5 cut(s) 172, 928, 1321, 1363, 1371
Lsp1109I GCAGC 3 cut(s) 16, 25, 53
LweI GCATC 3 cut(s) 154, 459, 580
MaeI CTAG 3 cut(s) 858, 1410, 1416
MaeII ACGT 3 cut(s) 965, 1246, 1400
MaeIII GTNAC 6 cut(s) 209, 602, 874, 980, 1394, 1401
MalI GATC 9 cut(s) 131, 145, 218, 414, 482, 741, 935, 959, 1062
MboI GATC 9 cut(s) 129, 143, 216, 412, 480, 739, 933, 957, 1060
MfeI CAATTG 1 cut(s) 1016
MflI RGATCY 2 cut(s) 216, 480
MhlI GDGCHC 1 cut(s) 1368
MlsI TGGCCA 1 cut(s) 374
MluCI AATT 5 cut(s) 188, 1016, 1269, 1276, 1422
MluNI TGGCCA 1 cut(s) 374
Mly113I GGCGCC 1 cut(s) 86
MlyI GAGTC 3 cut(s) 19, 953, 1277
MmeI TCCRAC 5 cut(s) 294, 458, 745, 1159, 1281
Mox20I TGGCCA 1 cut(s) 374
MscI TGGCCA 1 cut(s) 374
MseI TTAA 7 cut(s) 530, 552, 614, 1082, 1212, 1421, 1426
MslI CAYNNNNRTG 2 cut(s) 455, 1143
Msp20I TGGCCA 1 cut(s) 374
MspI CCGG 8 cut(s) 105, 214, 287, 484, 565, 666, 872, 1025
MspR9I CCNGG 7 cut(s) 105, 235, 322, 485, 566, 667, 1025
MunI CAATTG 1 cut(s) 1016
Mva1269I GAATGC 1 cut(s) 1222
MvaI CCWGG 2 cut(s) 235, 322
MvnI CGCG 1 cut(s) 950
MwoI GCNNNNNNNGC 5 cut(s) 26, 35, 38, 92, 326
NarI GGCGCC 1 cut(s) 86
NciI CCSGG 5 cut(s) 105, 485, 566, 667, 1025
NcoI CCATGG 3 cut(s) 375, 660, 885
NdeII GATC 9 cut(s) 129, 143, 216, 412, 480, 739, 933, 957, 1060
NlaIII CATG 9 cut(s) 70, 379, 590, 664, 809, 835, 844, 889, 1015
NlaIV GGNNCC 9 cut(s) 87, 232, 300, 385, 482, 775, 870, 909, 1023
NmuCI GTSAC 4 cut(s) 602, 874, 1394, 1401
PagI TCATGA 1 cut(s) 586
PaqCI CACCTGC 1 cut(s) 520
PceI AGGCCT 1 cut(s) 320
PcsI WCGNNNNNNNCGW 2 cut(s) 947, 971
PctI GAATGC 1 cut(s) 1222
PfeI GAWTC 1 cut(s) 5
PflMI CCANNNNNTGG 2 cut(s) 132, 886
PinAI ACCGGT 1 cut(s) 871
PkrI GCNGC 3 cut(s) 31, 40, 43
PleI GAGTC 3 cut(s) 18, 952, 1277
PluTI GGCGCC 1 cut(s) 89
PpsI GAGTC 3 cut(s) 18, 952, 1277
Ppu21I YACGTR 1 cut(s) 1247
PpuMI RGGWCCY 1 cut(s) 230
PshAI GACNNNNGTC 1 cut(s) 821
Psp124BI GAGCTC 1 cut(s) 1368
Psp5II RGGWCCY 1 cut(s) 230
Psp6I CCWGG 2 cut(s) 233, 320
PspEI GGTNACC 1 cut(s) 874
PspFI CCCAGC 1 cut(s) 1324
PspGI CCWGG 2 cut(s) 233, 320
PspN4I GGNNCC 9 cut(s) 87, 232, 300, 385, 482, 775, 870, 909, 1023
PspPI GGNCC 3 cut(s) 73, 230, 1021
PspPPI RGGWCCY 1 cut(s) 230
PsrI GAACNNNNNNTAC 2 cut(s) 973, 1005
PstI CTGCAG 2 cut(s) 34, 43
PstNI CAGNNNCTG 2 cut(s) 38, 695
PsuI RGATCY 2 cut(s) 216, 480
RsaI GTAC 3 cut(s) 65, 118, 1079
RsaNI GTAC 3 cut(s) 64, 117, 1078
RseI CAYNNNNRTG 2 cut(s) 455, 1143
SacI GAGCTC 1 cut(s) 1368
SalI GTCGAC 1 cut(s) 814
SaqAI TTAA 7 cut(s) 530, 552, 614, 1082, 1212, 1421, 1426
SatI GCNGC 3 cut(s) 30, 39, 42
Sau3AI GATC 9 cut(s) 129, 143, 216, 412, 480, 739, 933, 957, 1060
Sau96I GGNCC 3 cut(s) 73, 230, 1021
ScaI AGTACT 1 cut(s) 1079
SchI GAGTC 3 cut(s) 19, 953, 1277
ScrFI CCNGG 7 cut(s) 105, 235, 322, 485, 566, 667, 1025
SduI GDGCHC 1 cut(s) 1368
SfaNI GCATC 3 cut(s) 154, 459, 580
SfcI CTRYAG 2 cut(s) 30, 39
SfoI GGCGCC 1 cut(s) 87
SinI GGWCC 2 cut(s) 230, 1021
SmiMI CAYNNNNRTG 2 cut(s) 455, 1143
SmlI CTYRAG 1 cut(s) 1288
SmoI CTYRAG 1 cut(s) 1288
SnaBI TACGTA 1 cut(s) 1247
Sse9I AATT 5 cut(s) 188, 1016, 1269, 1276, 1422
SseBI AGGCCT 1 cut(s) 320
SsiI CCGC 4 cut(s) 515, 926, 948, 1028
SspDI GGCGCC 1 cut(s) 85
SspI AATATT 1 cut(s) 272
SspMI CTAG 3 cut(s) 858, 1410, 1416
SstI GAGCTC 1 cut(s) 1368
StuI AGGCCT 1 cut(s) 320
StyD4I CCNGG 7 cut(s) 103, 233, 320, 483, 564, 665, 1023
StyI CCWWGG 5 cut(s) 375, 660, 857, 885, 1066
TaaI ACNGT 4 cut(s) 572, 813, 823, 1315
TaiI ACGT 3 cut(s) 968, 1249, 1403
TaqI TCGA 6 cut(s) 8, 406, 543, 815, 825, 1097
TasI AATT 5 cut(s) 188, 1016, 1269, 1276, 1422
TatI WGTACW 1 cut(s) 1077
TfiI GAWTC 1 cut(s) 5
Tru1I TTAA 7 cut(s) 530, 552, 614, 1082, 1212, 1421, 1426
Tru9I TTAA 7 cut(s) 530, 552, 614, 1082, 1212, 1421, 1426
TscAI CASTG 2 cut(s) 601, 1318
TseFI GTSAC 4 cut(s) 602, 874, 1394, 1401
TseI GCWGC 3 cut(s) 29, 38, 41
Tsp45I GTSAC 4 cut(s) 602, 874, 1394, 1401
TspDTI ATGAA 6 cut(s) 213, 526, 575, 820, 996, 1239
TspRI CASTG 2 cut(s) 601, 1318
Van91I CCANNNNNTGG 2 cut(s) 132, 886
VpaK11BI GGWCC 2 cut(s) 230, 1021
XapI RAATTY 2 cut(s) 1269, 1276
XcmI CCANNNNNNNNNTGG 1 cut(s) 1142
XmaJI CCTAGG 1 cut(s) 857
XmiI GTMKAC 1 cut(s) 815
XspI CTAG 3 cut(s) 858, 1410, 1416
ZrmI AGTACT 1 cut(s) 1079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.