Rorug02G0244400

PDDEXK-like family of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0018361
Physical Location & Seq
Reverse (-)
25398340 .. 25400568
2229 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0244400.1

Sequence Viewer

Length: 1725 bp
ATGGAGGTTGAAGACTGCGACTTCAACATGGGCAGCTGGATCCTGATGCGCTTCACCAATCCGACGCGCAAGGAGCACCTAGAGATTCGCCAAATCACAGTCGCCATGGCCCATGACTTCATAGCGCAGAAGGTTGCTCCCTCCGCCGTTGCCTACTTGGAGGCCACGTGTTTGTCTCTGTCCCAGCTCCCGTCCTCCTCCGAGCCTCACGTCATCGAGGCCCTCTTCACAATTCTCTCCGTCGTCATTCCACAAGTCTCACCCGAAATTCTGAATAGCCGCAGCAAGTTGGTATCCGAGGCCGTGGTCCGTCTTCTCCGAATTCAACCCTCATCTTTGAATAACAATGCAGGCGCGTTGGGACTGAAATGCATATCACAGTTGCTCGCTGCTATTATCCTCAACAACAACTCTAACTCTAACTCTACCTGGTCCGACGTTTCCTACTTGTACGACTACTTACTCGACTTCACCACCAGTTCCATCCTTCGGGTGAGGAAACCATCATCTCATGTGATTGGGGAGCTGCTGCAAAGTTTCCAAGGCACACCGCATCTTGCCCCTGCAAGTGAAGCCCTTACTAGCTTGTTTGAAAGGTGGTGGCTTCCTGTGCTTTCTGGTGGTGGCGCATCAAATACTGCTGCTGCTGCTGCCTTGACTCGGCGAGGAGTCCCAGAGTACTGGTATCTTTTGGATGTTATGAAAATATGTCTCGTCTTCATGCCTACCAAGTTCAAGCTAGCAGTTCTCAATTACTTTAAGGCTATCTTCGAACTCATCTTGGAACTGGAAGCGCATAGACCCCCTGTTACGGTGCGCCTAGGGTGGTGCCTTCATAGAGTCTGCCTCCACCCATCTACAGATGTTCCACCACAGCTGTTGCTCGACCTCTTATGCTTGGTATCTAAGTCTGTCTCTAGAAAAGTTCCACACGCGCATGAGGGGTACACCACGTCCTCATTGCTCAATACTGGAGTGGCAAAAGTTTATTCCTCCAACAGGGGAATCTGTGTGAGTAAACTCCCTCTTGTGTTTCATGCACTCAAAATTTTGATGGGGAAACCTGTACAAGAGGATGACGGCAATATAGAAGAGGACATTGACGCAGCAGCAAACGCATTCAAGTGTGTCATTCATGCTTGCGTTGATCAAGGCTTGATCAAACAGGGAGTTGACCAGATCGGTGCCATTGCAAACAAGTATGAGCCTCAGCCTCAGGAGTCGACCATAATAGAAAAATTGTGTGCTACTATTCACAGCTTGCTTGGTTATCACCAGACTAATGCTCCTGCTCTCAGCATGGACCTTGCATTTGAAGTTGTTTCGACAATGTTCGATAAATTAGGGGCATATGCTTCTTATTTCATGAGAGGTACACTGGAGAGGTTGGCAGACATGCACAAGTTGCCTGATGAAGAATTCCCTTTCAGGAAGCAGGCTACACTTCTTCTAGGATCCCTTGTCGAGGAGAAATGTGGGCTTCATGATGATATCAATATTAGGGCTGTCCTGCCTCAAGAACAACTCATGGCACTGCTTGCAGATTACAGGGGCCTTAAGTCCCAAAAAAAGTCGGAACTTTCTCATCGAAAACGGAAGATGGGGTTGAATATTGGGTCCCCCCCAGGAAGCTTGCCATACGATTGTTCACCAGAGATGATGGCTGAGGCAGCTAAAGCTGCGGTATCTGGTGCTGCGCAGATAGCAAAGAAGATTAAACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PDDEXK_6

Protein Analysis

574

Amino Acids

63.19

Weight (kDa)

6.98

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 10 - 289 4e-50 RRP12-like, N-terminal HEAT repeats
RRP12_HEAT PF08161 367 - 489 3.2e-12 Ribosomal RNA-processing protein 12, HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018361)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25290
rosa_chinensis RchiOBHm_Chr2g0123301
rosa_multiflora Rmu_sc0001917.1_g000003
rosa_roxburghii Rroxscaffold_2G00120790
rosa_rugosa Rorug02G0244300 Rorug02G0244400
rosa_samantha Rh2AG303500 Rh2CG290100 Rh2DG327500
rosa_wichuraiana Rw2G024290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1698
AccB1I GGYRCC 2 cut(s) 828, 1184
AccI GTMKAC 1 cut(s) 1223
AccII CGCG 3 cut(s) 67, 356, 935
AciI CCGC 4 cut(s) 144, 280, 551, 1682
AclWI GGATC 4 cut(s) 34, 47, 1449, 1462
AcsI RAATTY 4 cut(s) 267, 321, 1047, 1418
AcvI CACGTG 1 cut(s) 168
AfaI GTAC 5 cut(s) 452, 680, 947, 1068, 1375
AfiI CCNNNNNNNGG 5 cut(s) 489, 660, 811, 999, 1465
AflII CTTAAG 1 cut(s) 1556
AflIII ACRYGT 1 cut(s) 167
AgsI TTSAA 9 cut(s) 11, 25, 326, 340, 593, 736, 1123, 1316, 1609
AjiI CACGTC 2 cut(s) 211, 954
AjnI CCWGG 2 cut(s) 428, 1624
Alw21I GWGCWC 1 cut(s) 78
Alw26I GTCTC 4 cut(s) 180, 262, 716, 919
AlwI GGATC 4 cut(s) 34, 47, 1449, 1462
AoxI GGCC 5 cut(s) 108, 162, 219, 300, 1552
ApoI RAATTY 4 cut(s) 267, 321, 1047, 1418
ArsI GACNNNNNNTTYG 2 cut(s) 1295, 1327
AspA2I CCTAGG 1 cut(s) 820
AspLEI GCGC 9 cut(s) 51, 69, 127, 356, 629, 796, 819, 937, 1699
AspS9I GGNCC 7 cut(s) 109, 220, 307, 432, 1303, 1552, 1617
AsuHPI GGTGA 6 cut(s) 46, 252, 463, 505, 1265, 1641
AsuII TTCGAA 1 cut(s) 771
AsuNHI GCTAGC 1 cut(s) 739
AvaII GGWCC 4 cut(s) 307, 432, 1303, 1617
AvrII CCTAGG 1 cut(s) 820
AxyI CCTNAGG 1 cut(s) 1215
BamHI GGATCC 2 cut(s) 39, 1454
BanI GGYRCC 2 cut(s) 828, 1184
BbrPI CACGTG 1 cut(s) 168
BbsI GAAGAC 3 cut(s) 18, 305, 709
Bbv12I GWGCWC 1 cut(s) 78
BbvCI CCTCAGC 2 cut(s) 1209, 1665
BccI CCATC 6 cut(s) 491, 511, 862, 1048, 1594, 1654
BceAI ACGGC 3 cut(s) 131, 287, 1096
BciT130I CCWGG 2 cut(s) 430, 1626
BciVI GTATCC 1 cut(s) 304
BclI TGATCA 2 cut(s) 1147, 1158
BcoDI GTCTC 4 cut(s) 180, 262, 716, 919
BfaI CTAG 6 cut(s) 80, 582, 740, 821, 918, 1451
BfmI CTRYAG 1 cut(s) 858
BfrI CTTAAG 1 cut(s) 1556
BfuI GTATCC 1 cut(s) 304
BlnI CCTAGG 1 cut(s) 820
BmcAI AGTACT 1 cut(s) 680
Bme1390I CCNGG 2 cut(s) 430, 1626
Bme18I GGWCC 4 cut(s) 307, 432, 1303, 1617
BmgBI CACGTC 2 cut(s) 211, 954
BmgT120I GGNCC 7 cut(s) 109, 220, 307, 432, 1303, 1552, 1617
BmiI GGNNCC 7 cut(s) 41, 830, 1186, 1456, 1553, 1618, 1619
BmrFI CCNGG 2 cut(s) 430, 1626
BmsI GCATC 3 cut(s) 36, 562, 638
BmtI GCTAGC 1 cut(s) 743
BpiI GAAGAC 3 cut(s) 18, 305, 709
BplI GAGNNNNNCTC 2 cut(s) 831, 863
BpmI CTGGAG 2 cut(s) 993, 1400
Bpu10I CCTNAGC 2 cut(s) 1209, 1665
Bpu14I TTCGAA 1 cut(s) 771
BpuEI CTTGAG 1 cut(s) 1500
BsaAI YACGTR 1 cut(s) 168
BsaJI CCNNGG 6 cut(s) 105, 297, 303, 541, 820, 1624
BsaXI ACNNNNNCTCC 4 cut(s) 152, 182, 1270, 1300
Bsc4I CCNNNNNNNGG 5 cut(s) 489, 660, 811, 999, 1465
Bse1I ACTGG 5 cut(s) 477, 686, 792, 976, 1383
Bse21I CCTNAGG 1 cut(s) 1215
Bse3DI GCAATG 2 cut(s) 959, 1188
BseBI CCWGG 2 cut(s) 430, 1626
BseDI CCNNGG 6 cut(s) 105, 297, 303, 541, 820, 1624
BseGI GGATG 3 cut(s) 483, 700, 1081
BseLI CCNNNNNNNGG 5 cut(s) 489, 660, 811, 999, 1465
BseMI GCAATG 2 cut(s) 959, 1188
BseMII CTCAG 4 cut(s) 1223, 1229, 1309, 1656
BseNI ACTGG 5 cut(s) 477, 686, 792, 976, 1383
BseRI GAGGAG 3 cut(s) 187, 681, 1481
BseYI CCCAGC 1 cut(s) 183
Bsh1236I CGCG 3 cut(s) 67, 356, 935
BshFI GGCC 5 cut(s) 110, 164, 221, 302, 1554
BshNI GGYRCC 2 cut(s) 828, 1184
BsiHKAI GWGCWC 1 cut(s) 78
BslFI GGGAC 5 cut(s) 166, 375, 656, 1546, 1603
BslI CCNNNNNNNGG 5 cut(s) 489, 660, 811, 999, 1465
BsmAI GTCTC 4 cut(s) 180, 262, 716, 919
BsmFI GGGAC 5 cut(s) 166, 375, 656, 1546, 1603
BsmI GAATGC 1 cut(s) 1118
BsnI GGCC 5 cut(s) 110, 164, 221, 302, 1554
Bsp119I TTCGAA 1 cut(s) 771
Bsp1286I GDGCHC 1 cut(s) 78
Bsp1407I TGTACA 1 cut(s) 1066
Bsp143I GATC 5 cut(s) 39, 1147, 1158, 1179, 1454
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 4 cut(s) 144, 280, 551, 1682
BspANI GGCC 5 cut(s) 110, 164, 221, 302, 1554
BspCNI CTCAG 4 cut(s) 1222, 1228, 1308, 1657
BspFNI CGCG 3 cut(s) 67, 356, 935
BspHI TCATGA 2 cut(s) 1365, 1483
BspLI GGNNCC 7 cut(s) 41, 830, 1186, 1456, 1553, 1618, 1619
BspOI GCTAGC 1 cut(s) 743
BspPI GGATC 4 cut(s) 34, 47, 1449, 1462
BspT104I TTCGAA 1 cut(s) 771
BspT107I GGYRCC 2 cut(s) 828, 1184
BspTI CTTAAG 1 cut(s) 1556
BsrDI GCAATG 2 cut(s) 959, 1188
BsrGI TGTACA 1 cut(s) 1066
BsrI ACTGG 5 cut(s) 477, 686, 792, 976, 1383
BssECI CCNNGG 6 cut(s) 105, 297, 303, 541, 820, 1624
BssMI GATC 5 cut(s) 39, 1147, 1158, 1179, 1454
BssT1I CCWWGG 3 cut(s) 105, 541, 820
Bst2UI CCWGG 2 cut(s) 430, 1626
Bst4CI ACNGT 3 cut(s) 100, 381, 814
Bst6I CTCTTC 2 cut(s) 230, 1086
BstAFI CTTAAG 1 cut(s) 1556
BstAPI GCANNNNNTGC 2 cut(s) 1405, 1538
BstAUI TGTACA 1 cut(s) 1066
BstBAI YACGTR 1 cut(s) 168
BstBI TTCGAA 1 cut(s) 771
BstC8I GCNNGC 8 cut(s) 352, 387, 741, 1141, 1262, 1437, 1539, 1634
BstDEI CTNAG 5 cut(s) 906, 1209, 1215, 1295, 1665
BstDSI CCRYGG 2 cut(s) 105, 303
BstENI CCTNNNNNAGG 2 cut(s) 997, 1463
BstF5I GGATG 3 cut(s) 483, 700, 1081
BstFNI CGCG 3 cut(s) 67, 356, 935
BstHHI GCGC 9 cut(s) 51, 69, 127, 356, 629, 796, 819, 937, 1699
BstKTI GATC 5 cut(s) 42, 1150, 1161, 1182, 1457
BstMAI GTCTC 4 cut(s) 180, 262, 716, 919
BstMBI GATC 5 cut(s) 39, 1147, 1158, 1179, 1454
BstNI CCWGG 2 cut(s) 430, 1626
BstNSI RCATGY 1 cut(s) 1399
BstSCI CCNGG 2 cut(s) 428, 1624
BstSFI CTRYAG 1 cut(s) 858
BstUI CGCG 3 cut(s) 67, 356, 935
BstV2I GAAGAC 3 cut(s) 18, 305, 709
BstX2I RGATCY 2 cut(s) 39, 1454
BstXI CCANNNNNNTGG 1 cut(s) 681
BstYI RGATCY 2 cut(s) 39, 1454
Bsu36I CCTNAGG 1 cut(s) 1215
BsuI GTATCC 1 cut(s) 304
BsuRI GGCC 5 cut(s) 110, 164, 221, 302, 1554
BtgI CCRYGG 2 cut(s) 105, 303
BtrI CACGTC 2 cut(s) 211, 954
BtsCI GGATG 3 cut(s) 483, 700, 1081
BtsI GCAGTG 1 cut(s) 1532
BtsIMutI CAGTG 2 cut(s) 1376, 1532
Cac8I GCNNGC 8 cut(s) 352, 387, 741, 1141, 1262, 1437, 1539, 1634
CciI TCATGA 2 cut(s) 1365, 1483
CfoI GCGC 9 cut(s) 51, 69, 127, 356, 629, 796, 819, 937, 1699
Cfr13I GGNCC 7 cut(s) 109, 220, 307, 432, 1303, 1552, 1617
CseI GACGC 2 cut(s) 73, 1112
CsiI ACCWGGT 1 cut(s) 428
Csp6I GTAC 5 cut(s) 451, 679, 946, 1067, 1374
CspCI CAANNNNNGTGG 2 cut(s) 861, 896
CviQI GTAC 5 cut(s) 451, 679, 946, 1067, 1374
DdeI CTNAG 5 cut(s) 906, 1209, 1215, 1295, 1665
DpnI GATC 5 cut(s) 41, 1149, 1160, 1181, 1456
DpnII GATC 5 cut(s) 39, 1147, 1158, 1179, 1454
Eam1104I CTCTTC 2 cut(s) 230, 1086
EarI CTCTTC 2 cut(s) 230, 1086
EciI GGCGGA 1 cut(s) 133
Eco130I CCWWGG 3 cut(s) 105, 541, 820
Eco32I GATATC 1 cut(s) 1492
Eco47I GGWCC 4 cut(s) 307, 432, 1303, 1617
Eco72I CACGTG 1 cut(s) 168
Eco81I CCTNAGG 1 cut(s) 1215
EcoNI CCTNNNNNAGG 2 cut(s) 997, 1463
EcoO109I RGGNCCY 3 cut(s) 220, 1552, 1617
EcoRI GAATTC 2 cut(s) 321, 1418
EcoRII CCWGG 2 cut(s) 428, 1624
EcoRV GATATC 1 cut(s) 1492
EcoT14I CCWWGG 3 cut(s) 105, 541, 820
EcoT22I ATGCAT 1 cut(s) 374
ErhI CCWWGG 3 cut(s) 105, 541, 820
FalI AAGNNNNNCTT 2 cut(s) 752, 784
FaqI GGGAC 5 cut(s) 166, 375, 656, 1546, 1603
FauNDI CATATG 1 cut(s) 1351
FbaI TGATCA 2 cut(s) 1147, 1158
FblI GTMKAC 1 cut(s) 1223
FokI GGATG 3 cut(s) 470, 707, 1088
FspBI CTAG 6 cut(s) 80, 582, 740, 821, 918, 1451
FspI TGCGCA 1 cut(s) 1698
GlaI GCGC 9 cut(s) 50, 68, 126, 355, 628, 795, 818, 936, 1698
GsaI CCCAGC 1 cut(s) 187
GsuI CTGGAG 2 cut(s) 993, 1400
HaeIII GGCC 5 cut(s) 110, 164, 221, 302, 1554
HgaI GACGC 2 cut(s) 73, 1112
HhaI GCGC 9 cut(s) 51, 69, 127, 356, 629, 796, 819, 937, 1699
Hin6I GCGC 9 cut(s) 49, 67, 125, 354, 627, 794, 817, 935, 1697
HinP1I GCGC 9 cut(s) 49, 67, 125, 354, 627, 794, 817, 935, 1697
HincII GTYRAC 2 cut(s) 1174, 1224
HindII GTYRAC 2 cut(s) 1174, 1224
HindIII AAGCTT 1 cut(s) 1630
HinfI GANTC 6 cut(s) 85, 658, 669, 840, 1005, 1220
HphI GGTGA 6 cut(s) 46, 252, 463, 505, 1265, 1641
Hpy166II GTNNAC 6 cut(s) 948, 1019, 1174, 1224, 1376, 1649
Hpy188I TCNGA 7 cut(s) 63, 202, 273, 298, 320, 436, 1576
Hpy188III TCNNGA 7 cut(s) 43, 918, 1217, 1366, 1429, 1484, 1517
Hpy8I GTNNAC 6 cut(s) 948, 1019, 1174, 1224, 1376, 1649
Hpy99I CGWCG 3 cut(s) 67, 245, 440
HpyAV CCTTC 3 cut(s) 124, 497, 842
HpyCH4III ACNGT 3 cut(s) 100, 381, 814
HpyCH4IV ACGT 4 cut(s) 167, 210, 438, 953
HpyCH4V TGCA 9 cut(s) 350, 372, 532, 566, 1040, 1193, 1310, 1399, 1541
HpyF3I CTNAG 5 cut(s) 906, 1209, 1215, 1295, 1665
HpySE526I ACGT 4 cut(s) 167, 210, 438, 953
HspAI GCGC 9 cut(s) 49, 67, 125, 354, 627, 794, 817, 935, 1697
KflI GGGWCCC 1 cut(s) 1617
Ksp22I TGATCA 2 cut(s) 1147, 1158
Kzo9I GATC 5 cut(s) 39, 1147, 1158, 1179, 1454
LmnI GCTCC 5 cut(s) 73, 142, 192, 523, 1291
LweI GCATC 3 cut(s) 36, 562, 638
MabI ACCWGGT 1 cut(s) 428
MaeI CTAG 6 cut(s) 80, 582, 740, 821, 918, 1451
MaeII ACGT 4 cut(s) 167, 210, 438, 953
MaeIII GTNAC 1 cut(s) 808
MalI GATC 5 cut(s) 41, 1149, 1160, 1181, 1456
MboI GATC 5 cut(s) 39, 1147, 1158, 1179, 1454
MflI RGATCY 2 cut(s) 39, 1454
MhlI GDGCHC 1 cut(s) 78
MluCI AATT 8 cut(s) 231, 267, 321, 751, 1047, 1238, 1340, 1418
MlyI GAGTC 4 cut(s) 652, 678, 849, 1229
MmeI TCCRAC 4 cut(s) 86, 459, 1020, 1554
Mph1103I ATGCAT 1 cut(s) 374
MseI TTAA 3 cut(s) 759, 1557, 1716
MslI CAYNNNNRTG 2 cut(s) 936, 1123
MspA1I CMGCKG 2 cut(s) 36, 877
MspCI CTTAAG 1 cut(s) 1556
MspR9I CCNGG 2 cut(s) 430, 1626
Mva1269I GAATGC 1 cut(s) 1118
MvaI CCWGG 2 cut(s) 430, 1626
MvnI CGCG 3 cut(s) 67, 356, 935
NcoI CCATGG 1 cut(s) 105
NdeI CATATG 1 cut(s) 1351
NdeII GATC 5 cut(s) 39, 1147, 1158, 1179, 1454
NheI GCTAGC 1 cut(s) 739
NlaIV GGNNCC 7 cut(s) 41, 830, 1186, 1456, 1553, 1618, 1619
NmeAIII GCCGAG 1 cut(s) 640
NsbI TGCGCA 1 cut(s) 1698
NsiI ATGCAT 1 cut(s) 374
NspI RCATGY 1 cut(s) 1399
NspV TTCGAA 1 cut(s) 771
PagI TCATGA 2 cut(s) 1365, 1483
PctI GAATGC 1 cut(s) 1118
PfeI GAWTC 2 cut(s) 85, 1005
PleI GAGTC 4 cut(s) 652, 677, 848, 1228
PmaCI CACGTG 1 cut(s) 168
PmlI CACGTG 1 cut(s) 168
PpsI GAGTC 4 cut(s) 652, 677, 848, 1228
Ppu21I YACGTR 1 cut(s) 168
PpuMI RGGWCCY 1 cut(s) 1617
Psp5II RGGWCCY 1 cut(s) 1617
Psp6I CCWGG 2 cut(s) 428, 1624
PspCI CACGTG 1 cut(s) 168
PspFI CCCAGC 1 cut(s) 183
PspGI CCWGG 2 cut(s) 428, 1624
PspN4I GGNNCC 7 cut(s) 41, 830, 1186, 1456, 1553, 1618, 1619
PspPI GGNCC 7 cut(s) 109, 220, 307, 432, 1303, 1552, 1617
PspPPI RGGWCCY 1 cut(s) 1617
PsuI RGATCY 2 cut(s) 39, 1454
PvuII CAGCTG 2 cut(s) 36, 877
RsaI GTAC 5 cut(s) 452, 680, 947, 1068, 1375
RsaNI GTAC 5 cut(s) 451, 679, 946, 1067, 1374
RseI CAYNNNNRTG 2 cut(s) 936, 1123
SalI GTCGAC 1 cut(s) 1222
SaqAI TTAA 3 cut(s) 759, 1557, 1716
Sau3AI GATC 5 cut(s) 39, 1147, 1158, 1179, 1454
Sau96I GGNCC 7 cut(s) 109, 220, 307, 432, 1303, 1552, 1617
ScaI AGTACT 1 cut(s) 680
SchI GAGTC 4 cut(s) 652, 678, 849, 1229
ScrFI CCNGG 2 cut(s) 430, 1626
SduI GDGCHC 1 cut(s) 78
SexAI ACCWGGT 1 cut(s) 428
SfaNI GCATC 3 cut(s) 36, 562, 638
SfcI CTRYAG 1 cut(s) 858
SfuI TTCGAA 1 cut(s) 771
SinI GGWCC 4 cut(s) 307, 432, 1303, 1617
SmiMI CAYNNNNRTG 2 cut(s) 936, 1123
SmlI CTYRAG 2 cut(s) 1515, 1556
SmoI CTYRAG 2 cut(s) 1515, 1556
Sse9I AATT 8 cut(s) 231, 267, 321, 751, 1047, 1238, 1340, 1418
SsiI CCGC 4 cut(s) 144, 280, 551, 1682
SspI AATATT 2 cut(s) 1498, 1612
SspMI CTAG 6 cut(s) 80, 582, 740, 821, 918, 1451
StyD4I CCNGG 2 cut(s) 428, 1624
StyI CCWWGG 3 cut(s) 105, 541, 820
TaaI ACNGT 3 cut(s) 100, 381, 814
TaiI ACGT 4 cut(s) 170, 213, 441, 956
TaqI TCGA 9 cut(s) 216, 465, 771, 885, 1223, 1325, 1335, 1464, 1588
TasI AATT 8 cut(s) 231, 267, 321, 751, 1047, 1238, 1340, 1418
TatI WGTACW 2 cut(s) 678, 1066
TauI GCSGC 1 cut(s) 282
TfiI GAWTC 2 cut(s) 85, 1005
Tru1I TTAA 3 cut(s) 759, 1557, 1716
Tru9I TTAA 3 cut(s) 759, 1557, 1716
TscAI CASTG 2 cut(s) 1383, 1539
TspDTI ATGAA 9 cut(s) 109, 709, 716, 824, 1025, 1124, 1354, 1428, 1472
TspGWI ACGGA 3 cut(s) 229, 299, 1609
TspRI CASTG 2 cut(s) 1383, 1539
Vha464I CTTAAG 1 cut(s) 1556
VpaK11BI GGWCC 4 cut(s) 307, 432, 1303, 1617
XagI CCTNNNNNAGG 2 cut(s) 997, 1463
XapI RAATTY 4 cut(s) 267, 321, 1047, 1418
XbaI TCTAGA 1 cut(s) 917
XceI RCATGY 1 cut(s) 1399
XmaJI CCTAGG 1 cut(s) 820
XmiI GTMKAC 1 cut(s) 1223
XspI CTAG 6 cut(s) 80, 582, 740, 821, 918, 1451
ZrmI AGTACT 1 cut(s) 680
Zsp2I ATGCAT 1 cut(s) 374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.