Transmembrane E3 ubiquitin-protein ligase 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20650 AT2G20650 AT4G28370 AT4G28370 AT4G28370 AT4G28370 |
| fragaria_vesca | FvH4_6g26490 FvH4_6g26490 FvH4_6g26490 FvH4_6g26490 FvH4_6g26490 FvH4_6g26490 |
| malus_domestica | MD09G1244500.v1.1 MD17G1236500.v1.1 |
| prunus_persica | Prupe.3G139300_v2.0.a1 Prupe.3G139300_v2.0.a1 |
| pyrus_communis | pycom09g16280 pycom17g23960 |
| rosa_chinensis | RchiOBHm_Chr2g0127681 |
| rosa_laevigata | RLG00000018942 |
| rosa_multiflora | Rmu_sc0005528.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00116670 |
| rosa_rugosa | Rorug02G0271600 |
| rosa_samantha | Rh2AG323800 Rh2BG333000 Rh2CG311400 |
| rosa_wichuraiana | Rw2G026290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 45 |
| AcuI | CTGAAG | 1 cut(s) | 133 |
| AfaI | GTAC | 1 cut(s) | 103 |
| AgsI | TTSAA | 2 cut(s) | 94, 199 |
| AleI | CACNNNNGTG | 1 cut(s) | 150 |
| AluBI | AGCT | 1 cut(s) | 233 |
| AluI | AGCT | 1 cut(s) | 233 |
| AoxI | GGCC | 1 cut(s) | 45 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 146 |
| BalI | TGGCCA | 1 cut(s) | 47 |
| BccI | CCATC | 2 cut(s) | 110, 114 |
| BmcAI | AGTACT | 1 cut(s) | 103 |
| BmiI | GGNNCC | 1 cut(s) | 110 |
| BpuEI | CTTGAG | 1 cut(s) | 122 |
| BseGI | GGATG | 3 cut(s) | 125, 130, 232 |
| BseMII | CTCAG | 1 cut(s) | 190 |
| BshFI | GGCC | 1 cut(s) | 47 |
| BsmI | GAATGC | 1 cut(s) | 180 |
| BsnI | GGCC | 1 cut(s) | 47 |
| BspANI | GGCC | 1 cut(s) | 47 |
| BspCNI | CTCAG | 1 cut(s) | 189 |
| BspLI | GGNNCC | 1 cut(s) | 110 |
| BstDEI | CTNAG | 1 cut(s) | 176 |
| BstF5I | GGATG | 3 cut(s) | 125, 130, 232 |
| BsuRI | GGCC | 1 cut(s) | 47 |
| BtsCI | GGATG | 3 cut(s) | 125, 130, 232 |
| BtsIMutI | CAGTG | 1 cut(s) | 157 |
| Csp6I | GTAC | 1 cut(s) | 102 |
| CviAII | CATG | 2 cut(s) | 59, 79 |
| CviJI | RGCY | 3 cut(s) | 36, 47, 233 |
| CviKI_1 | RGCY | 3 cut(s) | 36, 47, 233 |
| CviQI | GTAC | 1 cut(s) | 102 |
| DdeI | CTNAG | 1 cut(s) | 176 |
| EaeI | YGGCCR | 1 cut(s) | 45 |
| Eco57I | CTGAAG | 1 cut(s) | 133 |
| FaeI | CATG | 2 cut(s) | 62, 82 |
| FaiI | YATR | 3 cut(s) | 60, 80, 215 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 131, 163 |
| FatI | CATG | 2 cut(s) | 58, 78 |
| FokI | GGATG | 2 cut(s) | 132, 137 |
| HaeIII | GGCC | 1 cut(s) | 47 |
| Hin1II | CATG | 2 cut(s) | 62, 82 |
| HindIII | AAGCTT | 1 cut(s) | 231 |
| HinfI | GANTC | 3 cut(s) | 11, 142, 172 |
| Hpy188I | TCNGA | 1 cut(s) | 22 |
| Hpy188III | TCNNGA | 2 cut(s) | 139, 209 |
| HpyAV | CCTTC | 1 cut(s) | 27 |
| HpyCH4V | TGCA | 1 cut(s) | 88 |
| HpyF3I | CTNAG | 1 cut(s) | 176 |
| Hsp92II | CATG | 2 cut(s) | 62, 82 |
| LpnPI | CCDG | 3 cut(s) | 182, 198, 208 |
| MlsI | TGGCCA | 1 cut(s) | 47 |
| MluCI | AATT | 1 cut(s) | 89 |
| MluNI | TGGCCA | 1 cut(s) | 47 |
| MnlI | CCTC | 1 cut(s) | 76 |
| Mox20I | TGGCCA | 1 cut(s) | 47 |
| MroXI | GAANNNNTTC | 1 cut(s) | 146 |
| MscI | TGGCCA | 1 cut(s) | 47 |
| MseI | TTAA | 2 cut(s) | 165, 235 |
| MslI | CAYNNNNRTG | 1 cut(s) | 150 |
| Msp20I | TGGCCA | 1 cut(s) | 47 |
| Mva1269I | GAATGC | 1 cut(s) | 180 |
| NlaIII | CATG | 2 cut(s) | 62, 82 |
| NlaIV | GGNNCC | 1 cut(s) | 110 |
| OliI | CACNNNNGTG | 1 cut(s) | 150 |
| PctI | GAATGC | 1 cut(s) | 180 |
| PdmI | GAANNNNTTC | 1 cut(s) | 146 |
| PfeI | GAWTC | 3 cut(s) | 11, 142, 172 |
| PspN4I | GGNNCC | 1 cut(s) | 110 |
| RsaI | GTAC | 1 cut(s) | 103 |
| RsaNI | GTAC | 1 cut(s) | 102 |
| RseI | CAYNNNNRTG | 1 cut(s) | 150 |
| SaqAI | TTAA | 2 cut(s) | 165, 235 |
| ScaI | AGTACT | 1 cut(s) | 103 |
| SetI | ASST | 3 cut(s) | 53, 99, 235 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 150 |
| SmlI | CTYRAG | 1 cut(s) | 137 |
| SmoI | CTYRAG | 1 cut(s) | 137 |
| Sse9I | AATT | 1 cut(s) | 89 |
| TasI | AATT | 1 cut(s) | 89 |
| TatI | WGTACW | 1 cut(s) | 101 |
| TfiI | GAWTC | 3 cut(s) | 11, 142, 172 |
| Tru1I | TTAA | 2 cut(s) | 165, 235 |
| Tru9I | TTAA | 2 cut(s) | 165, 235 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TspDTI | ATGAA | 2 cut(s) | 47, 230 |
| TspRI | CASTG | 1 cut(s) | 157 |
| XmnI | GAANNNNTTC | 1 cut(s) | 146 |
| ZrmI | AGTACT | 1 cut(s) | 103 |