Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0006126

Physical Location & Seq

Genomic Coordinates Forward (+)

39334596 .. 39351908

Gene Structure 17313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG311400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGGTAACCAATCAGTCGTCCAGACAAAAAGCACTAGCAGACTTGCAGCAGATGACTGTGCATATAAGCTACCGTACTCTATTAAGATCCTTCTTGAGTCTGCAATCTGTAACTGCGATGAGTTTCAGGTTAAGATTGAATTTCGGGTTTCTGATATGGGCACTCTCAGAAAATTAGGGTTCTTGTGGTCTCCGACGACCAAGTTGAGGTTTCTCTGCTGGTTCTGCGCCGCTTTGCTGCTTTCTCCGCCGGTGGCGGGTCTCAGACCCTTAAGGGAAAGGGCTCGCTCCTGGGGCGATGAGTGGCTATTTGTAAGAAAAGATGAAAGTGAGTTGGGACCCTTCTCTTCGTGGAACATAACAGGAACTTATAGAGGGACTTGGAAGTTTCCTGATTCTGCAAATAGCTCTTCCAGATTTCCAGAATTTAGGAAATCCAGTGGCAATTCCATCATCGAATTAGTTAGCACACAAACAAAAATAATGGGCGTACATTATGTGCAGGGTGTAATTATCTTCCATGATGTGTTTGACAATGAACACAATGTTGGGGGTGTCCAAATTAGAGTGGAAGGTGTATTTATATGGCCGTTTAAACAGCTTCGAATGGTAGCTAACAGTGGAAAAGAGGGAGACTCAAGCCAAGAGGAAGATTATATTTTGTCTAACCCGTATCATATGCTTGGAGCTTTCTCTTCCCAGGTTTTCCAAGAATCTCCACGAGATAAGCTATGGAGGAAAAAGCATTCGCCAATTTATGAAATGGAGAAACATTGTAATATAGAAATTGCAGGCCAAATTTCACGTGTATCATCCGCCCATAATGATGGAGATCGCGATCGTTACCAAATAGAAGGGTTGATGGAGAGTCCTGCAGTGGATGATGATGGAGATTGCTTCTCACCCTTGATATTAAATGCTACTTCTGTCAATGTGGAGGTGTACTATAACAAAGCAGTGAACTATACCTTGATGGTCACCTTTATCTCCTTCCTACAAGTTCTTCTCTTAATTCGGCAAATGGAACATAGCAATACTCAGTCGGGGGCTGCCAAAGTTTCGATTCTAATGATTGGCCAACAGGCTATCATGGATGCTTATCTTTGCCTTCTACACTTGACAGCAGGAATACTTGTTGAATCCTTATTTAATGCGTTTGCAACCGCTGCTTTTTTCAAGTTTGTTGTGTTCTCAATATTCGAGATGAGATACCTTCTTGCTATATGGAAAGCAAGTAGGCCTACAAATAGTGGAGAAGGTTGGGAGACGATGAGGCGTGAGCTTTCAGTTTTATATAGCCGTTTCTATGGAATTCTTTTAGGAGGCATCCTGGTCATGTACGAGTTCCACAACTTCTTGAGACCTATTCTTCTCCTTATGTACTCCTTTTGGATACCTCAAATAATCACCAATGTTATCCGTGATTCGAGAAAACCCTTGCACCCTCATTACATCTTAGGCATGACTGTTACTCGGCTAGCAATCCCGTTATACATATTTGGTTGCCCTAACAACTTCATGCGCATTGAGCCTGACAAGAGTTGGTGTATTTGTTTGAGTTTATTTATTGGACTGCAAGCCTCAATTCTTCTTCTCCAGCATTATCTTGGCTCTCGTTGGTTCATTCCTCGTCAGATTCTACCTGAGAAATATAGCTACCACAGAAGGTCTGATCAGGATACAAATCATGCCACAGACTGTGTCATTTGCATGACTGCAATTGATCTCACACAGCGTTCAGATGATTGCATGGTGACACCATGCGATCATTTCTTTCATTCCGGTTGTTTACAAAGGTGGATGGATATAAAGATGGAGTGTCCAACTTGTCGGCGTCCACTGCCCCCTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005975 GO:0005976 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009664 GO:0009791 GO:0009827 GO:0009845 GO:0009987 GO:0010154 GO:0010191 GO:0010393 GO:0010498 GO:0012505 GO:0016043 GO:0016567 GO:0016740 GO:0017144 GO:0019538 GO:0019787 GO:0019941 GO:0022414 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0036211 GO:0042545 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045229 GO:0045488 GO:0048316 GO:0048363 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0051603 GO:0061458 GO:0061630 GO:0061659 GO:0070647 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0080001 GO:0090351 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

617

Amino Acids

70.78

Weight (kDa)

7.52

Isoelectric Point (pI)

53.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF2921	PF11145	311 - 545	1.4e-99	Transmembrane E3 ligase/DUF2921 transmembrane domain
zf-RING_2	PF13639	566 - 611	8.8e-11	Ring finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20650 AT2G20650 AT4G28370 AT4G28370 AT4G28370 AT4G28370
fragaria_vesca	FvH4_6g26490 FvH4_6g26490 FvH4_6g26490 FvH4_6g26490 FvH4_6g26490 FvH4_6g26490
malus_domestica	MD09G1244500.v1.1 MD17G1236500.v1.1
prunus_persica	Prupe.3G139300_v2.0.a1 Prupe.3G139300_v2.0.a1
pyrus_communis	pycom09g16280 pycom17g23960
rosa_chinensis	RchiOBHm_Chr2g0127681
rosa_laevigata	RLG00000018942
rosa_multiflora	Rmu_sc0005528.1_g000001
rosa_roxburghii	Rroxscaffold_2G00116670
rosa_rugosa	Rorug02G0271600
rosa_samantha	Rh2AG323800 Rh2BG333000 Rh2CG311400
rosa_wichuraiana	Rw2G026290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1523
AccII	CGCG	1 cut(s)	837
AciI	CCGC	5 cut(s)	231, 248, 257, 816, 1164
AclWI	GGATC	1 cut(s)	82
AcoI	YGGCCR	2 cut(s)	587, 1075
AcsI	RAATTY	4 cut(s)	140, 425, 798, 1311
AcvI	CACGTG	1 cut(s)	806
AcyI	GRCGYC	1 cut(s)	1834
AfaI	GTAC	5 cut(s)	77, 492, 944, 1340, 1382
AfiI	CCNNNNNNNGG	2 cut(s)	207, 257
AflII	CTTAAG	1 cut(s)	271
AflIII	ACRYGT	1 cut(s)	805
AgsI	TTSAA	3 cut(s)	140, 1139, 1177
AjnI	CCWGG	3 cut(s)	290, 699, 1329
AjuI	GAANNNNNNNTTGG	2 cut(s)	531, 563
AluBI	AGCT	8 cut(s)	70, 408, 601, 614, 689, 730, 1282, 1656
AluI	AGCT	8 cut(s)	70, 408, 601, 614, 689, 730, 1282, 1656
Alw26I	GTCTC	5 cut(s)	195, 266, 627, 1259, 1354
AlwI	GGATC	1 cut(s)	82
AoxI	GGCC	4 cut(s)	587, 793, 1075, 1238
ApeKI	GCWGC	4 cut(s)	47, 238, 1049, 1166
ApoI	RAATTY	4 cut(s)	140, 425, 798, 1311
AspLEI	GCGC	2 cut(s)	230, 1524
AspS9I	GGNCC	1 cut(s)	338
AsuHPI	GGTGA	4 cut(s)	894, 970, 1399, 1765
AsuII	TTCGAA	1 cut(s)	604
AsuNHI	GCTAGC	1 cut(s)	1477
AvaII	GGWCC	1 cut(s)	338
BaeGI	GKGCMC	1 cut(s)	164
BalI	TGGCCA	1 cut(s)	1077
BanII	GRGCYC	1 cut(s)	286
BauI	CACGAG	1 cut(s)	720
BbrPI	CACGTG	1 cut(s)	806
BbvI	GCAGC	4 cut(s)	59, 225, 1036, 1153
BccI	CCATC	7 cut(s)	458, 821, 856, 881, 967, 1795, 1807
BceAI	ACGGC	2 cut(s)	574, 1284
BciT130I	CCWGG	3 cut(s)	292, 701, 1331
BciVI	GTATCC	2 cut(s)	1386, 1672
BclI	TGATCA	1 cut(s)	1672
BcoDI	GTCTC	5 cut(s)	195, 266, 627, 1259, 1354
BfaI	CTAG	2 cut(s)	36, 1478
BfmI	CTRYAG	1 cut(s)	873
BfrI	CTTAAG	1 cut(s)	271
BfuI	GTATCC	2 cut(s)	1386, 1672
BisI	GCNGC	5 cut(s)	48, 231, 239, 1050, 1167
BlsI	GCNGC	5 cut(s)	49, 232, 240, 1051, 1168
Bme1390I	CCNGG	3 cut(s)	292, 701, 1331
Bme18I	GGWCC	1 cut(s)	338
BmgT120I	GGNCC	1 cut(s)	338
BmiI	GGNNCC	2 cut(s)	339, 340
BmrFI	CCNGG	3 cut(s)	292, 701, 1331
BmsI	GCATC	2 cut(s)	1084, 1335
BmtI	GCTAGC	1 cut(s)	1481
BplI	GAGNNNNNCTC	2 cut(s)	620, 652
BpmI	CTGGAG	1 cut(s)	1580
Bpu14I	TTCGAA	1 cut(s)	604
BpuEI	CTTGAG	3 cut(s)	116, 622, 1378
BsaAI	YACGTR	1 cut(s)	806
BsaBI	GATNNNNATC	4 cut(s)	831, 837, 1098, 1683
BsaHI	GRCGYC	1 cut(s)	1834
BsaI	GGTCTC	3 cut(s)	195, 266, 1354
BsaJI	CCNNGG	2 cut(s)	291, 699
BsaWI	WCCGGW	1 cut(s)	1781
Bsc4I	CCNNNNNNNGG	2 cut(s)	207, 257
Bse118I	RCCGGY	1 cut(s)	250
Bse1I	ACTGG	1 cut(s)	438
Bse8I	GATNNNNATC	4 cut(s)	831, 837, 1098, 1683
BseBI	CCWGG	3 cut(s)	292, 701, 1331
BseDI	CCNNGG	2 cut(s)	291, 699
BseGI	GGATG	5 cut(s)	812, 886, 1099, 1326, 1806
BseJI	GATNNNNATC	4 cut(s)	831, 837, 1098, 1683
BseLI	CCNNNNNNNGG	2 cut(s)	207, 257
BseMII	CTCAG	4 cut(s)	181, 277, 1052, 1635
BseNI	ACTGG	1 cut(s)	438
BseSI	GKGCMC	1 cut(s)	164
BseXI	GCAGC	4 cut(s)	59, 225, 1036, 1153
BsgI	GTGCAG	1 cut(s)	521
Bsh1236I	CGCG	1 cut(s)	837
Bsh1285I	CGRYCG	1 cut(s)	841
BshFI	GGCC	4 cut(s)	589, 795, 1077, 1240
BsiEI	CGRYCG	1 cut(s)	841
BsiSI	CCGG	2 cut(s)	251, 1782
BslFI	GGGAC	2 cut(s)	351, 391
BslI	CCNNNNNNNGG	2 cut(s)	207, 257
BsmAI	GTCTC	5 cut(s)	195, 266, 627, 1259, 1354
BsmBI	CGTCTC	1 cut(s)	1259
BsmFI	GGGAC	2 cut(s)	351, 391
BsmI	GAATGC	1 cut(s)	745
BsnI	GGCC	4 cut(s)	589, 795, 1077, 1240
Bso31I	GGTCTC	3 cut(s)	195, 266, 1354
Bsp119I	TTCGAA	1 cut(s)	604
Bsp1286I	GDGCHC	2 cut(s)	164, 286
Bsp143I	GATC	6 cut(s)	87, 832, 838, 1672, 1723, 1765
Bsp68I	TCGCGA	1 cut(s)	837
BspACI	CCGC	5 cut(s)	231, 248, 257, 816, 1164
BspANI	GGCC	4 cut(s)	589, 795, 1077, 1240
BspCNI	CTCAG	4 cut(s)	180, 276, 1051, 1636
BspFNI	CGCG	1 cut(s)	837
BspLI	GGNNCC	2 cut(s)	339, 340
BspMAI	CTGCAG	1 cut(s)	877
BspOI	GCTAGC	1 cut(s)	1481
BspPI	GGATC	1 cut(s)	82
BspQI	GCTCTTC	1 cut(s)	415
BspT104I	TTCGAA	1 cut(s)	604
BspTI	CTTAAG	1 cut(s)	271
BspTNI	GGTCTC	3 cut(s)	195, 266, 1354
BsrFI	RCCGGY	1 cut(s)	250
BsrI	ACTGG	1 cut(s)	438
BssAI	RCCGGY	1 cut(s)	250
BssECI	CCNNGG	2 cut(s)	291, 699
BssMI	GATC	6 cut(s)	87, 832, 838, 1672, 1723, 1765
BssNI	GRCGYC	1 cut(s)	1834
BssSI	CACGAG	1 cut(s)	720
Bst2BI	CACGAG	1 cut(s)	720
Bst2UI	CCWGG	3 cut(s)	292, 701, 1331
Bst4CI	ACNGT	5 cut(s)	59, 75, 620, 1468, 1700
Bst6I	CTCTTC	3 cut(s)	352, 415, 700
BstACI	GRCGYC	1 cut(s)	1834
BstAFI	CTTAAG	1 cut(s)	271
BstAPI	GCANNNNNTGC	1 cut(s)	1166
BstBAI	YACGTR	1 cut(s)	806
BstBI	TTCGAA	1 cut(s)	604
BstC8I	GCNNGC	4 cut(s)	286, 793, 1479, 1578
BstDEI	CTNAG	5 cut(s)	167, 263, 1038, 1456, 1644
BstEII	GGTNACC	2 cut(s)	5, 976
BstF5I	GGATG	5 cut(s)	812, 886, 1099, 1326, 1806
BstFNI	CGCG	1 cut(s)	837
BstHHI	GCGC	2 cut(s)	230, 1524
BstKTI	GATC	6 cut(s)	90, 835, 841, 1675, 1726, 1768
BstMAI	GTCTC	5 cut(s)	195, 266, 627, 1259, 1354
BstMBI	GATC	6 cut(s)	87, 832, 838, 1672, 1723, 1765
BstMCI	CGRYCG	1 cut(s)	841
BstMWI	GCNNNNNNNGC	6 cut(s)	225, 247, 294, 1166, 1528, 1840
BstNI	CCWGG	3 cut(s)	292, 701, 1331
BstPI	GGTNACC	2 cut(s)	5, 976
BstSCI	CCNGG	3 cut(s)	290, 699, 1329
BstSFI	CTRYAG	1 cut(s)	873
BstSLI	GKGCMC	1 cut(s)	164
BstUI	CGCG	1 cut(s)	837
BstV1I	GCAGC	4 cut(s)	59, 225, 1036, 1153
BstX2I	RGATCY	1 cut(s)	87
BstXI	CCANNNNNNTGG	1 cut(s)	827
BstYI	RGATCY	1 cut(s)	87
BsuI	GTATCC	2 cut(s)	1386, 1672
BsuRI	GGCC	4 cut(s)	589, 795, 1077, 1240
BtgZI	GCGATG	2 cut(s)	132, 312
BtsCI	GGATG	5 cut(s)	812, 886, 1099, 1326, 1806
BtsI	GCAGTG	3 cut(s)	882, 963, 1838
BtsIMutI	CAGTG	5 cut(s)	445, 625, 882, 963, 1838
BtuMI	TCGCGA	1 cut(s)	837
Cac8I	GCNNGC	4 cut(s)	286, 793, 1479, 1578
CfoI	GCGC	2 cut(s)	230, 1524
Cfr10I	RCCGGY	1 cut(s)	250
Cfr13I	GGNCC	1 cut(s)	338
CseI	GACGC	1 cut(s)	1823
Csp6I	GTAC	5 cut(s)	76, 491, 943, 1339, 1381
CviAII	CATG	9 cut(s)	521, 1090, 1336, 1462, 1519, 1688, 1711, 1750, 1761
CviQI	GTAC	5 cut(s)	76, 491, 943, 1339, 1381
DdeI	CTNAG	5 cut(s)	167, 263, 1038, 1456, 1644
DpnI	GATC	6 cut(s)	89, 834, 840, 1674, 1725, 1767
DpnII	GATC	6 cut(s)	87, 832, 838, 1672, 1723, 1765
DraI	TTTAAA	1 cut(s)	595
EaeI	YGGCCR	2 cut(s)	587, 1075
Eam1104I	CTCTTC	3 cut(s)	352, 415, 700
EarI	CTCTTC	3 cut(s)	352, 415, 700
EciI	GGCGGA	2 cut(s)	237, 805
Eco147I	AGGCCT	1 cut(s)	1240
Eco24I	GRGCYC	1 cut(s)	286
Eco31I	GGTCTC	3 cut(s)	195, 266, 1354
Eco47I	GGWCC	1 cut(s)	338
Eco72I	CACGTG	1 cut(s)	806
Eco91I	GGTNACC	2 cut(s)	5, 976
EcoO109I	RGGNCCY	1 cut(s)	338
EcoO65I	GGTNACC	2 cut(s)	5, 976
EcoRI	GAATTC	1 cut(s)	1311
EcoRII	CCWGG	3 cut(s)	290, 699, 1329
EcoT38I	GRGCYC	1 cut(s)	286
Esp3I	CGTCTC	1 cut(s)	1259
FaeI	CATG	9 cut(s)	524, 1093, 1339, 1465, 1522, 1691, 1714, 1753, 1764
FaqI	GGGAC	2 cut(s)	351, 391
FatI	CATG	9 cut(s)	520, 1089, 1335, 1461, 1518, 1687, 1710, 1749, 1760
FauI	CCCGC	1 cut(s)	250
FauNDI	CATATG	1 cut(s)	678
FbaI	TGATCA	1 cut(s)	1672
Fnu4HI	GCNGC	5 cut(s)	48, 231, 239, 1050, 1167
FokI	GGATG	5 cut(s)	799, 893, 1106, 1313, 1813
FriOI	GRGCYC	1 cut(s)	286
Fsp4HI	GCNGC	5 cut(s)	48, 231, 239, 1050, 1167
FspAI	RTGCGCAY	1 cut(s)	1523
FspBI	CTAG	2 cut(s)	36, 1478
FspI	TGCGCA	1 cut(s)	1523
GlaI	GCGC	2 cut(s)	229, 1523
GluI	GCNGC	5 cut(s)	48, 231, 239, 1050, 1167
GsuI	CTGGAG	1 cut(s)	1580
HaeIII	GGCC	4 cut(s)	589, 795, 1077, 1240
HapII	CCGG	2 cut(s)	251, 1782
HgaI	GACGC	1 cut(s)	1823
HhaI	GCGC	2 cut(s)	230, 1524
Hin1I	GRCGYC	1 cut(s)	1834
Hin1II	CATG	9 cut(s)	524, 1093, 1339, 1465, 1522, 1691, 1714, 1753, 1764
Hin6I	GCGC	2 cut(s)	228, 1522
HinP1I	GCGC	2 cut(s)	228, 1522
HinfI	GANTC	9 cut(s)	98, 395, 635, 713, 868, 1063, 1139, 1424, 1636
HpaII	CCGG	2 cut(s)	251, 1782
HphI	GGTGA	4 cut(s)	894, 970, 1399, 1765
Hpy166II	GTNNAC	4 cut(s)	943, 961, 1790, 1838
Hpy188I	TCNGA	7 cut(s)	154, 170, 195, 266, 1635, 1672, 1741
Hpy8I	GTNNAC	4 cut(s)	943, 961, 1790, 1838
Hpy99I	CGWCG	1 cut(s)	199
HpyAV	CCTTC	9 cut(s)	101, 352, 566, 848, 1000, 1118, 1223, 1250, 1659
HpyCH4III	ACNGT	5 cut(s)	59, 75, 620, 1468, 1700
HpyCH4IV	ACGT	1 cut(s)	805
HpyF10VI	GCNNNNNNNGC	6 cut(s)	225, 247, 294, 1166, 1528, 1840
HpyF3I	CTNAG	5 cut(s)	167, 263, 1038, 1456, 1644
HpySE526I	ACGT	1 cut(s)	805
Hsp92I	GRCGYC	1 cut(s)	1834
Hsp92II	CATG	9 cut(s)	524, 1093, 1339, 1465, 1522, 1691, 1714, 1753, 1764
HspAI	GCGC	2 cut(s)	228, 1522
KflI	GGGWCCC	1 cut(s)	338
Ksp22I	TGATCA	1 cut(s)	1672
Kzo9I	GATC	6 cut(s)	87, 832, 838, 1672, 1723, 1765
LguI	GCTCTTC	1 cut(s)	415
LmnI	GCTCC	2 cut(s)	293, 686
Lsp1109I	GCAGC	4 cut(s)	59, 225, 1036, 1153
LweI	GCATC	2 cut(s)	1084, 1335
MaeI	CTAG	2 cut(s)	36, 1478
MaeII	ACGT	1 cut(s)	805
MaeIII	GTNAC	6 cut(s)	5, 110, 842, 976, 1468, 1753
MalI	GATC	6 cut(s)	89, 834, 840, 1674, 1725, 1767
MboI	GATC	6 cut(s)	87, 832, 838, 1672, 1723, 1765
MboII	GAAGA	9 cut(s)	339, 402, 508, 662, 687, 995, 1361, 1580, 1583
MfeI	CAATTG	1 cut(s)	1719
MflI	RGATCY	1 cut(s)	87
MhlI	GDGCHC	2 cut(s)	164, 286
MlsI	TGGCCA	1 cut(s)	1077
MluNI	TGGCCA	1 cut(s)	1077
MlyI	GAGTC	3 cut(s)	107, 629, 877
MmeI	TCCRAC	2 cut(s)	218, 1847
Mox20I	TGGCCA	1 cut(s)	1077
MscI	TGGCCA	1 cut(s)	1077
MseI	TTAA	7 cut(s)	84, 132, 272, 594, 914, 1010, 1149
MslI	CAYNNNNRTG	2 cut(s)	825, 1709
Msp20I	TGGCCA	1 cut(s)	1077
MspA1I	CMGCKG	1 cut(s)	1166
MspCI	CTTAAG	1 cut(s)	271
MspI	CCGG	2 cut(s)	251, 1782
MspR9I	CCNGG	3 cut(s)	292, 701, 1331
MssI	GTTTAAAC	1 cut(s)	595
MunI	CAATTG	1 cut(s)	1719
Mva1269I	GAATGC	1 cut(s)	745
MvaI	CCWGG	3 cut(s)	292, 701, 1331
MvnI	CGCG	1 cut(s)	837
MwoI	GCNNNNNNNGC	6 cut(s)	225, 247, 294, 1166, 1528, 1840
NdeI	CATATG	1 cut(s)	678
NdeII	GATC	6 cut(s)	87, 832, 838, 1672, 1723, 1765
NheI	GCTAGC	1 cut(s)	1477
NlaIII	CATG	9 cut(s)	524, 1093, 1339, 1465, 1522, 1691, 1714, 1753, 1764
NlaIV	GGNNCC	2 cut(s)	339, 340
NmeAIII	GCCGAG	1 cut(s)	1453
NmuCI	GTSAC	2 cut(s)	976, 1753
NruI	TCGCGA	1 cut(s)	837
NsbI	TGCGCA	1 cut(s)	1523
NspV	TTCGAA	1 cut(s)	604
PceI	AGGCCT	1 cut(s)	1240
PciSI	GCTCTTC	1 cut(s)	415
PctI	GAATGC	1 cut(s)	745
PfeI	GAWTC	6 cut(s)	395, 713, 1063, 1139, 1424, 1636
PflFI	GACNNNGTC	1 cut(s)	1700
PkrI	GCNGC	5 cut(s)	49, 232, 240, 1051, 1168
Ple19I	CGATCG	1 cut(s)	841
PleI	GAGTC	3 cut(s)	106, 629, 876
PmaCI	CACGTG	1 cut(s)	806
PmeI	GTTTAAAC	1 cut(s)	595
PmlI	CACGTG	1 cut(s)	806
PpsI	GAGTC	3 cut(s)	106, 629, 876
Ppu21I	YACGTR	1 cut(s)	806
PpuMI	RGGWCCY	1 cut(s)	338
Psp5II	RGGWCCY	1 cut(s)	338
Psp6I	CCWGG	3 cut(s)	290, 699, 1329
PspCI	CACGTG	1 cut(s)	806
PspEI	GGTNACC	2 cut(s)	5, 976
PspGI	CCWGG	3 cut(s)	290, 699, 1329
PspN4I	GGNNCC	2 cut(s)	339, 340
PspPI	GGNCC	1 cut(s)	338
PspPPI	RGGWCCY	1 cut(s)	338
PstI	CTGCAG	1 cut(s)	877
PsuI	RGATCY	1 cut(s)	87
PsyI	GACNNNGTC	1 cut(s)	1700
PvuI	CGATCG	1 cut(s)	841
RruI	TCGCGA	1 cut(s)	837
RsaI	GTAC	5 cut(s)	77, 492, 944, 1340, 1382
RsaNI	GTAC	5 cut(s)	76, 491, 943, 1339, 1381
RseI	CAYNNNNRTG	2 cut(s)	825, 1709
SapI	GCTCTTC	1 cut(s)	415
SaqAI	TTAA	7 cut(s)	84, 132, 272, 594, 914, 1010, 1149
SatI	GCNGC	5 cut(s)	48, 231, 239, 1050, 1167
Sau3AI	GATC	6 cut(s)	87, 832, 838, 1672, 1723, 1765
Sau96I	GGNCC	1 cut(s)	338
SchI	GAGTC	3 cut(s)	107, 629, 877
ScrFI	CCNGG	3 cut(s)	292, 701, 1331
SduI	GDGCHC	2 cut(s)	164, 286
SfaNI	GCATC	2 cut(s)	1084, 1335
SfcI	CTRYAG	1 cut(s)	873
SfuI	TTCGAA	1 cut(s)	604
SgrAI	CRCCGGYG	1 cut(s)	250
SinI	GGWCC	1 cut(s)	338
SmiMI	CAYNNNNRTG	2 cut(s)	825, 1709
SmlI	CTYRAG	4 cut(s)	95, 271, 637, 1357
SmoI	CTYRAG	4 cut(s)	95, 271, 637, 1357
SseBI	AGGCCT	1 cut(s)	1240
SsiI	CCGC	5 cut(s)	231, 248, 257, 816, 1164
SspI	AATATT	1 cut(s)	1197
SspMI	CTAG	2 cut(s)	36, 1478
StuI	AGGCCT	1 cut(s)	1240
StyD4I	CCNGG	3 cut(s)	290, 699, 1329
TaaI	ACNGT	5 cut(s)	59, 75, 620, 1468, 1700
TaiI	ACGT	1 cut(s)	808
TaqI	TCGA	5 cut(s)	456, 604, 1061, 1200, 1427
TatI	WGTACW	2 cut(s)	942, 1380
TauI	GCSGC	1 cut(s)	233
TfiI	GAWTC	6 cut(s)	395, 713, 1063, 1139, 1424, 1636
Tru1I	TTAA	7 cut(s)	84, 132, 272, 594, 914, 1010, 1149
Tru9I	TTAA	7 cut(s)	84, 132, 272, 594, 914, 1010, 1149
TscAI	CASTG	5 cut(s)	445, 625, 882, 963, 1845
TseFI	GTSAC	2 cut(s)	976, 1753
TseI	GCWGC	4 cut(s)	47, 238, 1049, 1166
Tsp45I	GTSAC	2 cut(s)	976, 1753
TspDTI	ATGAA	6 cut(s)	339, 552, 774, 1507, 1612, 1766
TspGWI	ACGGA	1 cut(s)	1409
TspRI	CASTG	5 cut(s)	445, 625, 882, 963, 1845
Tth111I	GACNNNGTC	1 cut(s)	1700
Vha464I	CTTAAG	1 cut(s)	271
VpaK11BI	GGWCC	1 cut(s)	338
XapI	RAATTY	4 cut(s)	140, 425, 798, 1311
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1604
XspI	CTAG	2 cut(s)	36, 1478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.