Rorug02G0279800

Belongs to the universal ribosomal protein uS9 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0018927
Physical Location & Seq
Forward (+)
30188989 .. 30191214
2226 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0279800.1

Sequence Viewer

Length: 2061 bp
ATGGTGAGTCTGACGGACTTGGATCTCTCTATTAACGAACTCACCGGAGAAATACCAGAAAGTCTCTCAGAGCTCAAGAACCTTATCCTACTCAACCTGTATAAAAACAATCTTTACGGCCCCATACCCAACTTCATCGGCGATCTTTCTCATCTGGAGGTGCTTCAAGTTTGGGAGAATAACTTCACATTTGAACTACCTGAGAGTCTTGGCCGGAATGGAAGGCTCAAAGACCTCGATGTAACCGGTAACCACCTCACCGGGTTGATTCCTCGAGATTTGTGCAAAGGAGGGAGGTTGAGGGCGTTGATTCTGATGGATAATCACTTCTTTGGGCCGATTCCGGAGGCATTGGGTCGGTGCAAGTCACTGGTCAAAATCAGATTGGAGAAAAACACACTCAACGGGACTATTCCTGCCGGAATCTTCAGCTTACCTCATGTGAACATAATTGAGATCAATGATAATTACTTGTCCGGAGAACTCCCGATGCAGCTGTCTGGTACCTCACTCGGAATCCTCACTCTTTCTGGTAATCAAATTTCTGGAAGAATCCCATCTACCATTGGAAATCTCCGGAATTTACAAACTCTTTCACTAGATATGAACAGATTCTCTGGGCCAGTACCAGAGGAAATCTTCAGTTTACAATTGCTAGTGAAACTCAACATCAGCACCAACAATTTTGGTAGTGAAATTCCGGCTTCAATCTCTGGTTATTCCTCTCTAACGTTCCTAGATTTTAGTCAAAACACTTTAGTTGGGGAAATCCCAAGAGGGATAGGCAAAGTGAATGCAATTGAGTTTCTTAATTTCTCAAGGAACAAGCTAACAGGTCCAATACCTGTGGAATTCATATACATGAGGAGCCTCACAAATTTGGATCTCTCCTATAACAATTTCACTGGTAGGCTCCCAACCGGAGGTCAGTTTTTAGTGTTCAACAACGCTTCATTTGCTGGAAATCCCAATCTTTGTTCGCCGGGAAAGGTGTTATGCAGCTCTGATAACCACCCACGACCTCGAGACCATAAAGTCATCACCGTAGGACTGACCGGAGCTCTGCTAACTTTGCTACTCATGCTGCTTCTTATATATGTGGTTATCAGGGTTTATAGGACGAGGAAGATCAGAAAGATAGAGAAATGTGGCTCTTGGAAGCTAACAGTTTTCCAAGTACAGCTCGATCTCAACATAGAGGACATTCTCCAGTGTCTAAACGCAGAGAACATTATCGGCAGGGGTGGTGCTGGAGTTGTCTACCGGGGGACAATGCCAAATGGTGGTGATATTGCAATCAAACAGCTGCAGAGGGATCAGGGATTTTCAGCTGAAATTAAAACATTGGGACAAATCAAGCACCGAAATATAGTGCGGCTGTTGGGGTACATGTCGAACAAGGACACGAATTTGTTGCTGTACGAGTACATGCCTAATGGTAGCTTGGGACAATTTTTGCGTGGGCCTAATGGAGGGCATTTGGAGTGGGAAATCAGGTACAAGATTGCTGTGGAAGCTGCCAAGGGATTGTGTTATCTCCACCATGACTGTTCGCCTCTGATTATACACAGGGATGTAAAGTCCCATAACATCTTGCTGGACTCTAACTTTGAAGCTCATGTTGCTGACTTTGGGCTTGCCAAGTACTTTCAAGGACCAACAGATTGCATGTCTTCGCTTGCTGGTACCTTTGGTTACATTGCCCCAGAGTACGGTTGCACACTACAAGTGGATGAGAAAATCGATGTGTACAGCTTTGGTGTGGTTCTGCTGGAACTAGTAACAGGGAGGAAACCAGTGGTGGAACTAGTCGAAGAAGCTGTGAACCTAGTAACTTGGGTAAGGAAAACCACATCAGAAATCCCTCAGTCATCCAACGCATCATCTGTACTTGCAGTTGTGGACTCTAGGCTCAGTGAGCTCCCATTGGCAGGTGTCGAGCATATGTTCAAGATAGCGATGATGTGCGTCAAGAATCACAGCTCTTCAAGACCTACAATGAGGGAAGTTGTCTACTTGCTCACTAATCCTCCTTCTGTTCCAGGCATGACAAACCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko03010 map03010
Pfam Domains
Protein Families
Ribosomal_S9

Protein Analysis

686

Amino Acids

75.78

Weight (kDa)

6.95

Isoelectric Point (pI)

32.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 174 - 295 2.9e-08 Leucine-rich repeat region
Pkinase PF00069 408 - 671 5.4e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 408 - 671 2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018927)

Species Orthologous Gene IDs
pyrus_communis pycom10g08020
rosa_chinensis RchiOBHm_Chr6g0255201
rosa_multiflora Rmu_sc0001879.1_g000005
rosa_roxburghii Rroxscaffold_1G00030090
rosa_rugosa Rorug02G0279800
rosa_samantha Rh3BG175600 Rh3CG166700 Rh4AG078700 Rh4DG213700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1922
AasI GACNNNNNNGTC 1 cut(s) 1034
Acc36I ACCTGC 1 cut(s) 1922
Acc65I GGTACC 2 cut(s) 503, 1685
AccB1I GGYRCC 2 cut(s) 503, 1685
AccB7I CCANNNNNTGG 1 cut(s) 1283
AccI GTMKAC 2 cut(s) 1260, 2013
AccIII TCCGGA 3 cut(s) 343, 476, 576
AciI CCGC 1 cut(s) 1375
AclI AACGTT 1 cut(s) 731
AclWI GGATC 3 cut(s) 30, 891, 1323
AcoI YGGCCR 1 cut(s) 211
AcsI RAATTY 6 cut(s) 540, 580, 696, 851, 877, 1408
AcuI CTGAAG 2 cut(s) 412, 625
AfiI CCNNNNNNNGG 5 cut(s) 923, 1283, 1472, 1712, 1931
AflIII ACRYGT 1 cut(s) 1389
AgeI ACCGGT 1 cut(s) 245
AgsI TTSAA 8 cut(s) 167, 194, 708, 943, 1613, 1652, 1951, 1989
AhlI ACTAGT 2 cut(s) 1777, 1807
AjnI CCWGG 1 cut(s) 2041
Alw21I GWGCWC 3 cut(s) 75, 1063, 1923
Alw26I GTCTC 2 cut(s) 68, 1020
AlwI GGATC 3 cut(s) 30, 891, 1323
Ama87I CYCGRG 2 cut(s) 273, 1023
Aor13HI TCCGGA 3 cut(s) 343, 476, 576
AoxI GGCC 5 cut(s) 118, 211, 335, 620, 1463
ApeKI GCWGC 5 cut(s) 493, 999, 1084, 1306, 1517
ApoI RAATTY 6 cut(s) 540, 580, 696, 851, 877, 1408
ArsI GACNNNNNNTTYG 2 cut(s) 1592, 1624
AsiGI ACCGGT 1 cut(s) 245
Asp700I GAANNNNTTC 2 cut(s) 182, 611
Asp718I GGTACC 2 cut(s) 503, 1685
AspS9I GGNCC 6 cut(s) 119, 335, 620, 836, 1463, 1655
AsuC2I CCSGG 3 cut(s) 262, 984, 1265
AsuHPI GGTGA 5 cut(s) 16, 34, 250, 1033, 1298
AvaI CYCGRG 2 cut(s) 273, 1023
AvaII GGWCC 2 cut(s) 836, 1655
BanI GGYRCC 2 cut(s) 503, 1685
BanII GRGCYC 3 cut(s) 75, 1063, 1923
BbsI GAAGAC 1 cut(s) 1665
Bbv12I GWGCWC 3 cut(s) 75, 1063, 1923
BbvI GCAGC 5 cut(s) 505, 1011, 1071, 1293, 1504
BccI CCATC 2 cut(s) 310, 565
BceAI ACGGC 1 cut(s) 133
BcgI CGANNNNNNTGC 4 cut(s) 264, 298, 1396, 1430
BciT130I CCWGG 1 cut(s) 2043
BcnI CCSGG 3 cut(s) 262, 984, 1265
BcoDI GTCTC 2 cut(s) 68, 1020
BcuI ACTAGT 2 cut(s) 1777, 1807
BfaI CTAG 7 cut(s) 599, 656, 737, 1778, 1808, 1829, 1908
BfmI CTRYAG 1 cut(s) 1307
BfuAI ACCTGC 1 cut(s) 1922
BisI GCNGC 6 cut(s) 494, 1000, 1085, 1307, 1376, 1518
BlsI GCNGC 6 cut(s) 495, 1001, 1086, 1308, 1377, 1519
BmcAI AGTACT 1 cut(s) 1646
Bme1390I CCNGG 4 cut(s) 262, 984, 1265, 2043
Bme18I GGWCC 2 cut(s) 836, 1655
BmeT110I CYCGRG 2 cut(s) 273, 1023
BmgT120I GGNCC 6 cut(s) 119, 335, 620, 836, 1463, 1655
BmiI GGNNCC 5 cut(s) 121, 505, 869, 914, 1687
BmrFI CCNGG 4 cut(s) 262, 984, 1265, 2043
BmsI GCATC 2 cut(s) 480, 1889
BpiI GAAGAC 1 cut(s) 1665
BpmI CTGGAG 3 cut(s) 176, 1193, 1272
BpuEI CTTGAG 2 cut(s) 59, 802
BpuMI CCSGG 3 cut(s) 262, 984, 1265
Bsa29I ATCGAT 1 cut(s) 1743
BsaI GGTCTC 1 cut(s) 1020
BsaJI CCNNGG 2 cut(s) 1264, 1521
BsaWI WCCGGW 7 cut(s) 44, 245, 343, 476, 576, 920, 1055
BsaXI ACNNNNNCTCC 2 cut(s) 2014, 2044
Bsc4I CCNNNNNNNGG 5 cut(s) 923, 1283, 1472, 1712, 1931
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 5 cut(s) 375, 623, 910, 1210, 1796
Bse3DI GCAATG 1 cut(s) 1698
BseAI TCCGGA 3 cut(s) 343, 476, 576
BseBI CCWGG 1 cut(s) 2043
BseCI ATCGAT 1 cut(s) 1743
BseDI CCNNGG 2 cut(s) 1264, 1521
BseGI GGATG 3 cut(s) 1579, 1738, 1871
BseLI CCNNNNNNNGG 5 cut(s) 923, 1283, 1472, 1712, 1931
BseMI GCAATG 1 cut(s) 1698
BseMII CTCAG 4 cut(s) 81, 192, 1880, 1927
BseNI ACTGG 5 cut(s) 375, 623, 910, 1210, 1796
BseRI GAGGAG 1 cut(s) 880
BseXI GCAGC 5 cut(s) 505, 1011, 1071, 1293, 1504
BshFI GGCC 5 cut(s) 120, 213, 337, 622, 1465
BshNI GGYRCC 2 cut(s) 503, 1685
BshTI ACCGGT 1 cut(s) 245
BshVI ATCGAT 1 cut(s) 1743
BsiHKAI GWGCWC 3 cut(s) 75, 1063, 1923
BsiHKCI CYCGRG 2 cut(s) 273, 1023
BslFI GGGAC 5 cut(s) 421, 1282, 1362, 1461, 1567
BslI CCNNNNNNNGG 5 cut(s) 923, 1283, 1472, 1712, 1931
BsmAI GTCTC 2 cut(s) 68, 1020
BsmFI GGGAC 5 cut(s) 421, 1282, 1362, 1461, 1567
BsmI GAATGC 1 cut(s) 799
BsnI GGCC 5 cut(s) 120, 213, 337, 622, 1465
Bso31I GGTCTC 1 cut(s) 1020
BsoBI CYCGRG 2 cut(s) 273, 1023
Bsp1286I GDGCHC 3 cut(s) 75, 1063, 1923
Bsp13I TCCGGA 3 cut(s) 343, 476, 576
Bsp1407I TGTACA 1 cut(s) 1749
Bsp143I GATC 7 cut(s) 22, 142, 456, 883, 1128, 1186, 1315
BspACI CCGC 1 cut(s) 1375
BspANI GGCC 5 cut(s) 120, 213, 337, 622, 1465
BspCNI CTCAG 4 cut(s) 80, 193, 1879, 1926
BspDI ATCGAT 1 cut(s) 1743
BspEI TCCGGA 3 cut(s) 343, 476, 576
BspLI GGNNCC 5 cut(s) 121, 505, 869, 914, 1687
BspMAI CTGCAG 1 cut(s) 1311
BspMI ACCTGC 1 cut(s) 1922
BspPI GGATC 3 cut(s) 30, 891, 1323
BspQI GCTCTTC 1 cut(s) 1990
BspT107I GGYRCC 2 cut(s) 503, 1685
BspTNI GGTCTC 1 cut(s) 1020
BsrDI GCAATG 1 cut(s) 1698
BsrFI RCCGGY 1 cut(s) 245
BsrGI TGTACA 1 cut(s) 1749
BsrI ACTGG 5 cut(s) 375, 623, 910, 1210, 1796
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 2 cut(s) 1264, 1521
BssMI GATC 7 cut(s) 22, 142, 456, 883, 1128, 1186, 1315
BssT1I CCWWGG 1 cut(s) 1521
Bst2UI CCWGG 1 cut(s) 2043
Bst4CI ACNGT 4 cut(s) 1045, 1168, 1550, 1715
Bst6I CTCTTC 1 cut(s) 1990
BstAUI TGTACA 1 cut(s) 1749
BstC8I GCNNGC 2 cut(s) 1638, 1680
BstDEI CTNAG 5 cut(s) 67, 201, 1866, 1913, 2058
BstEII GGTNACC 1 cut(s) 248
BstENI CCTNNNNNAGG 1 cut(s) 1470
BstF5I GGATG 3 cut(s) 1579, 1738, 1871
BstKTI GATC 7 cut(s) 25, 145, 459, 886, 1131, 1189, 1318
BstMAI GTCTC 2 cut(s) 68, 1020
BstMBI GATC 7 cut(s) 22, 142, 456, 883, 1128, 1186, 1315
BstMWI GCNNNNNNNGC 6 cut(s) 956, 1072, 1081, 1514, 1622, 1918
BstNI CCWGG 1 cut(s) 2043
BstNSI RCATGY 3 cut(s) 1393, 1432, 1672
BstPI GGTNACC 1 cut(s) 248
BstSCI CCNGG 4 cut(s) 260, 982, 1263, 2041
BstSFI CTRYAG 1 cut(s) 1307
BstV1I GCAGC 5 cut(s) 505, 1011, 1071, 1293, 1504
BstV2I GAAGAC 1 cut(s) 1665
BstX2I RGATCY 2 cut(s) 22, 883
BstYI RGATCY 2 cut(s) 22, 883
Bsu15I ATCGAT 1 cut(s) 1743
BsuRI GGCC 5 cut(s) 120, 213, 337, 622, 1465
BsuTUI ATCGAT 1 cut(s) 1743
BtgZI GCGATG 1 cut(s) 1973
BtsCI GGATG 3 cut(s) 1579, 1738, 1871
BtsIMutI CAGTG 5 cut(s) 368, 903, 1217, 1803, 1921
BveI ACCTGC 1 cut(s) 1922
Cac8I GCNNGC 2 cut(s) 1638, 1680
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 6 cut(s) 119, 335, 620, 836, 1463, 1655
ClaI ATCGAT 1 cut(s) 1743
CseI GACGC 1 cut(s) 1957
CspAI ACCGGT 1 cut(s) 245
CspCI CAANNNNNGTGG 2 cut(s) 828, 863
CviAII CATG 9 cut(s) 440, 862, 1081, 1390, 1429, 1544, 1619, 1669, 2047
DdeI CTNAG 5 cut(s) 67, 201, 1866, 1913, 2058
DpnI GATC 7 cut(s) 24, 144, 458, 885, 1130, 1188, 1317
DpnII GATC 7 cut(s) 22, 142, 456, 883, 1128, 1186, 1315
DrdI GACNNNNNNGTC 1 cut(s) 1034
DseDI GACNNNNNNGTC 1 cut(s) 1034
EaeI YGGCCR 1 cut(s) 211
Eam1104I CTCTTC 1 cut(s) 1990
EarI CTCTTC 1 cut(s) 1990
Ecl136II GAGCTC 3 cut(s) 73, 1061, 1921
Eco130I CCWWGG 1 cut(s) 1521
Eco24I GRGCYC 3 cut(s) 75, 1063, 1923
Eco31I GGTCTC 1 cut(s) 1020
Eco47I GGWCC 2 cut(s) 836, 1655
Eco53kI GAGCTC 3 cut(s) 73, 1061, 1921
Eco57I CTGAAG 2 cut(s) 412, 625
Eco88I CYCGRG 2 cut(s) 273, 1023
Eco91I GGTNACC 1 cut(s) 248
EcoICRI GAGCTC 3 cut(s) 73, 1061, 1921
EcoNI CCTNNNNNAGG 1 cut(s) 1470
EcoO65I GGTNACC 1 cut(s) 248
EcoRI GAATTC 1 cut(s) 851
EcoRII CCWGG 1 cut(s) 2041
EcoT14I CCWWGG 1 cut(s) 1521
EcoT38I GRGCYC 3 cut(s) 75, 1063, 1923
ErhI CCWWGG 1 cut(s) 1521
FaeI CATG 9 cut(s) 443, 865, 1084, 1393, 1432, 1547, 1622, 1672, 2050
FaqI GGGAC 5 cut(s) 421, 1282, 1362, 1461, 1567
FatI CATG 9 cut(s) 439, 861, 1080, 1389, 1428, 1543, 1618, 1668, 2046
FauNDI CATATG 1 cut(s) 1944
FblI GTMKAC 2 cut(s) 1260, 2013
Fnu4HI GCNGC 6 cut(s) 494, 1000, 1085, 1307, 1376, 1518
FokI GGATG 3 cut(s) 1586, 1745, 1858
FriOI GRGCYC 3 cut(s) 75, 1063, 1923
Fsp4HI GCNGC 6 cut(s) 494, 1000, 1085, 1307, 1376, 1518
FspBI CTAG 7 cut(s) 599, 656, 737, 1778, 1808, 1829, 1908
GluI GCNGC 6 cut(s) 494, 1000, 1085, 1307, 1376, 1518
GsuI CTGGAG 3 cut(s) 176, 1193, 1272
HaeIII GGCC 5 cut(s) 120, 213, 337, 622, 1465
HgaI GACGC 1 cut(s) 1957
Hin1II CATG 9 cut(s) 443, 865, 1084, 1393, 1432, 1547, 1622, 1672, 2050
HphI GGTGA 5 cut(s) 16, 34, 250, 1033, 1298
Hpy166II GTNNAC 7 cut(s) 445, 647, 1261, 1750, 1825, 1903, 2014
Hpy188I TCNGA 9 cut(s) 12, 70, 315, 383, 515, 1006, 1133, 1560, 1858
Hpy8I GTNNAC 7 cut(s) 445, 647, 1261, 1750, 1825, 1903, 2014
HpyAV CCTTC 2 cut(s) 216, 2043
HpyCH4III ACNGT 4 cut(s) 1045, 1168, 1550, 1715
HpyCH4IV ACGT 1 cut(s) 731
HpyF10VI GCNNNNNNNGC 6 cut(s) 956, 1072, 1081, 1514, 1622, 1918
HpyF3I CTNAG 5 cut(s) 67, 201, 1866, 1913, 2058
HpySE526I ACGT 1 cut(s) 731
Hsp92II CATG 9 cut(s) 443, 865, 1084, 1393, 1432, 1547, 1622, 1672, 2050
Kpn2I TCCGGA 3 cut(s) 343, 476, 576
KpnI GGTACC 2 cut(s) 507, 1689
Kzo9I GATC 7 cut(s) 22, 142, 456, 883, 1128, 1186, 1315
LguI GCTCTTC 1 cut(s) 1990
LmnI GCTCC 4 cut(s) 867, 918, 1058, 1926
Lsp1109I GCAGC 5 cut(s) 505, 1011, 1071, 1293, 1504
LweI GCATC 2 cut(s) 480, 1889
MaeI CTAG 7 cut(s) 599, 656, 737, 1778, 1808, 1829, 1908
MaeII ACGT 1 cut(s) 731
MaeIII GTNAC 6 cut(s) 241, 248, 366, 1694, 1780, 1831
MalI GATC 7 cut(s) 24, 144, 458, 885, 1130, 1188, 1317
MboI GATC 7 cut(s) 22, 142, 456, 883, 1128, 1186, 1315
MboII GAAGA 7 cut(s) 418, 561, 631, 1138, 1665, 1826, 1977
MfeI CAATTG 2 cut(s) 650, 798
MflI RGATCY 2 cut(s) 22, 883
MhlI GDGCHC 3 cut(s) 75, 1063, 1923
MlyI GAGTC 4 cut(s) 16, 214, 1595, 1898
MmeI TCCRAC 1 cut(s) 1899
MroI TCCGGA 3 cut(s) 343, 476, 576
MroXI GAANNNNTTC 2 cut(s) 182, 611
MseI TTAA 3 cut(s) 33, 810, 1338
MslI CAYNNNNRTG 2 cut(s) 860, 1572
MspA1I CMGCKG 3 cut(s) 496, 1306, 1331
MspR9I CCNGG 4 cut(s) 262, 984, 1265, 2043
MunI CAATTG 2 cut(s) 650, 798
Mva1269I GAATGC 1 cut(s) 799
MvaI CCWGG 1 cut(s) 2043
MwoI GCNNNNNNNGC 6 cut(s) 956, 1072, 1081, 1514, 1622, 1918
NciI CCSGG 3 cut(s) 262, 984, 1265
NdeI CATATG 1 cut(s) 1944
NdeII GATC 7 cut(s) 22, 142, 456, 883, 1128, 1186, 1315
NlaIII CATG 9 cut(s) 443, 865, 1084, 1393, 1432, 1547, 1622, 1672, 2050
NlaIV GGNNCC 5 cut(s) 121, 505, 869, 914, 1687
NmuCI GTSAC 1 cut(s) 366
NspI RCATGY 3 cut(s) 1393, 1432, 1672
PaeR7I CTCGAG 2 cut(s) 273, 1023
PaqCI CACCTGC 1 cut(s) 1922
PciI ACATGT 1 cut(s) 1389
PciSI GCTCTTC 1 cut(s) 1990
PctI GAATGC 1 cut(s) 799
PdmI GAANNNNTTC 2 cut(s) 182, 611
PfeI GAWTC 8 cut(s) 268, 310, 340, 423, 516, 552, 612, 1975
PflMI CCANNNNNTGG 1 cut(s) 1283
PinAI ACCGGT 1 cut(s) 245
PkrI GCNGC 6 cut(s) 495, 1001, 1086, 1308, 1377, 1519
PleI GAGTC 4 cut(s) 15, 213, 1595, 1898
PpsI GAGTC 4 cut(s) 15, 213, 1595, 1898
PscI ACATGT 1 cut(s) 1389
Psp124BI GAGCTC 3 cut(s) 75, 1063, 1923
Psp1406I AACGTT 1 cut(s) 731
Psp6I CCWGG 1 cut(s) 2041
PspEI GGTNACC 1 cut(s) 248
PspGI CCWGG 1 cut(s) 2041
PspN4I GGNNCC 5 cut(s) 121, 505, 869, 914, 1687
PspPI GGNCC 6 cut(s) 119, 335, 620, 836, 1463, 1655
PstI CTGCAG 1 cut(s) 1311
PsuI RGATCY 2 cut(s) 22, 883
PvuII CAGCTG 3 cut(s) 496, 1306, 1331
RseI CAYNNNNRTG 2 cut(s) 860, 1572
SacI GAGCTC 3 cut(s) 75, 1063, 1923
SapI GCTCTTC 1 cut(s) 1990
SaqAI TTAA 3 cut(s) 33, 810, 1338
SatI GCNGC 6 cut(s) 494, 1000, 1085, 1307, 1376, 1518
Sau3AI GATC 7 cut(s) 22, 142, 456, 883, 1128, 1186, 1315
Sau96I GGNCC 6 cut(s) 119, 335, 620, 836, 1463, 1655
ScaI AGTACT 1 cut(s) 1646
SchI GAGTC 4 cut(s) 16, 214, 1595, 1898
ScrFI CCNGG 4 cut(s) 262, 984, 1265, 2043
SduI GDGCHC 3 cut(s) 75, 1063, 1923
SfaNI GCATC 2 cut(s) 480, 1889
SfcI CTRYAG 1 cut(s) 1307
Sfr274I CTCGAG 2 cut(s) 273, 1023
SinI GGWCC 2 cut(s) 836, 1655
SlaI CTCGAG 2 cut(s) 273, 1023
SmiMI CAYNNNNRTG 2 cut(s) 860, 1572
SmlI CTYRAG 4 cut(s) 74, 273, 817, 1023
SmoI CTYRAG 4 cut(s) 74, 273, 817, 1023
SpeI ACTAGT 2 cut(s) 1777, 1807
SsiI CCGC 1 cut(s) 1375
SspMI CTAG 7 cut(s) 599, 656, 737, 1778, 1808, 1829, 1908
SstI GAGCTC 3 cut(s) 75, 1063, 1923
StyD4I CCNGG 4 cut(s) 260, 982, 1263, 2041
StyI CCWWGG 1 cut(s) 1521
TaaI ACNGT 4 cut(s) 1045, 1168, 1550, 1715
TaiI ACGT 1 cut(s) 734
TaqI TCGA 8 cut(s) 237, 274, 1024, 1185, 1394, 1743, 1812, 1938
TatI WGTACW 5 cut(s) 1177, 1425, 1644, 1749, 1888
TauI GCSGC 1 cut(s) 1378
TfiI GAWTC 8 cut(s) 268, 310, 340, 423, 516, 552, 612, 1975
Tru1I TTAA 3 cut(s) 33, 810, 1338
Tru9I TTAA 3 cut(s) 33, 810, 1338
TscAI CASTG 5 cut(s) 375, 910, 1217, 1803, 1921
TseFI GTSAC 1 cut(s) 366
TseI GCWGC 5 cut(s) 493, 999, 1084, 1306, 1517
Tsp45I GTSAC 1 cut(s) 366
TspDTI ATGAA 4 cut(s) 124, 620, 844, 942
TspGWI ACGGA 1 cut(s) 29
TspRI CASTG 5 cut(s) 375, 910, 1217, 1803, 1921
Van91I CCANNNNNTGG 1 cut(s) 1283
VpaK11BI GGWCC 2 cut(s) 836, 1655
XagI CCTNNNNNAGG 1 cut(s) 1470
XapI RAATTY 6 cut(s) 540, 580, 696, 851, 877, 1408
XceI RCATGY 3 cut(s) 1393, 1432, 1672
XhoI CTCGAG 2 cut(s) 273, 1023
XmiI GTMKAC 2 cut(s) 1260, 2013
XmnI GAANNNNTTC 2 cut(s) 182, 611
XspI CTAG 7 cut(s) 599, 656, 737, 1778, 1808, 1829, 1908
ZrmI AGTACT 1 cut(s) 1646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.