Rorug02G0428900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0017504
Physical Location & Seq
Reverse (-)
54929555 .. 54935722
6168 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0428900.1

Sequence Viewer

Length: 2154 bp
ATGAAGTATAATAAGAGCTCTCACCATCATCACCATGGAGTGTCGAGCTCCAACTGGTCAACAATGGCCAGGAAGAGAAGCACAAGACTCACCTTGTTCTTCTTCCTCCTCCTCTCTCTCATAGCCTTCGGGGTCTTTGTCCCTGTCTTTGCTCTTCTACCTTCTCTTTCCCAATCTCAAAATGACCAACAGCACCATCCAACAACCAAAAGCAGTCCAGATTATGTCAGAAAGTTTGAAATTTCAGAAGACAGGTTCTGGAAAGATGGTCAGCCTTTCCAGATCATTGGGGGTGACTTGCATTATTTTCGGGTTCTTCCTGAGTACTGGGAAGATAGGCTGTTGAGAGCAAAGGCGCTGGGATTAAATACTATTCAAACTTATGTACCCTGGAACCTGCATGAACCAAGAGCTGGTACTTTGAATTTTGAGGGTATTGCAGATTTAGTGTCATTTCTCGAACTCTGCCAGAAGCTTGGGTTTGCTGTTATGCTTAGACCTGGGCCATATATATGTGGAGAGTGGGATTTGGGTGGTTTCCCTGCTTGGTTACTTGCCATCAAGCCAGCTCTCACACTAAGATCATCTGACCCAGCTTTCCTTCAATTGGTTGAAAGATGGTGGGGAAGCCTACTTCCAAAGATAGCTCCTCTTCTTTATGGAAATGGTGGTCCAATTATAATGGTTCAGATTGAAAATGAGTATGGTTCATATGCAAGTGACAAAGCTTATCTTCATCACTTGGTCTCATTGGCTAGAAAGCACCTTGGGGATGAAGTAATTTTGTATACTACAGATGGAGGTTCTAGGGAAACTCTGGAGAAAGGAACAATTCGTGGAGATGCTGTCTTTTCTGCTGTTGACTTCACTACTGGTGATAATCCTTGGCCTATATTTGAGTTACAAAAAGAGTTCAATGCCGCAGGGAAATCACCGCCACTTTCTTCGGAGTTTTACACAGGTTGGCTAACACACTGGGGGGAGAAGAATGCGCAAACTGATGCTGATTTTACAGCAGCTTCCTTAAAAAGAATTTTAGAAAGAAATGGTTCTGCAGTGCTTTATATGGCACATGGAGGAACAAACTTTGGATTTTATAATGGAGCAAACACTGGTTCAGATGAGTCTGATTACAAGCCTGATCTCACTTCCTATGATTATGATGCACCAATTAGGGAGTCTGGGGATGTGAGCAATGCAAAATTCAAAGCACTTAGGAAGGTTATAGAGCAATACAGTTCAGAATCTCTCCCTCCAATTCCATCCGATATTGAAAAGAAAACATACGGATATATTCACGTATCAAAAACCGGGAATTTGTTTGATATGATACATGATTTTGATGTGGTTGAATCTGAAAACCCAATAACAATGGAGTCGGTAGGCCAGATGTCTGGATTTTTGTTATATGTAACTGAATATGCTGCAAAGGACTATGATGGTGGAAACATTGTATCCATACCAAAGGTGCATGACAGAGCTCAAGTTTTTATATCATGTCCTTCTCAAGATGGGCATGGAAAACCAACATACGTTGGCACATTTGAAAGATGGTCGAATCAACCACTGTCCCTTCCTAATACTAAATGTCTCTCCAAAATCAGCTTATATGTGCTGGTTGAAAATATGGGACGTTTAAATTATGGGCCATATATCTTTGACATGAAGGGTATTCTATCTTCTGTTTATCTGGATGGAAGAATTCTCCGTGGATGGAAAATGTACTTGTTGCCTCTACTCAACCTGAACGAGAATCCGAAAGTCAATCCCATAATTCAGGCTACAGATTCTGGATTCATTACAATGTCAACCCGTAAAAAGTTAAAACCGAAGTCAACAACTGCTTCAAATGAACCAGCATTCTATGCTGGAAAGTTTTCTATCAGCAAACAAGACAAAATAAAAGATACGTTCATATCATTGAGTGGTTGGGGTAAAGGAATTGTGACTATTAACAATTTCAATATAGGAAGATTTTGGCCGTTAAAGGGACCACAGTGCAACCTTTATGTTCCTGCTCCTATCCTTAGGCATGGGGAGAACATTGTGGTGATATTTGAGTTACAAGCGCCAAACCCTGAGCTTGTGGTACACTTGGTCGATCAGCCAGACTTTACCTGTGCTCCAAGTAAATCGAATCTGCATCAGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

717

Amino Acids

80.48

Weight (kDa)

6.73

Isoelectric Point (pI)

39.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_35 PF01301 86 - 411 4.7e-119 Glycosyl hydrolases family 35
Glyco_hydro_42 PF02449 105 - 239 1.1e-06 Beta-galactosidase
BetaGal_ABD_1 PF21317 455 - 577 5.9e-23 Beta-galactosidase, first all-beta domain
BetaGal_gal-bd PF21467 619 - 681 6.4e-22 Beta-galactosidase, galactose-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017504)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06475
fragaria_vesca FvH4_6g38520
malus_domestica MD09G1150000.v1.1 MD17G1137200.v1.1
prunus_persica Prupe.3G175200_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0151771
rosa_multiflora Rmu_co8423145.1_g000001 Rmu_sc0002042.1_g000008
rosa_roxburghii Rroxscaffold_2G00096170
rosa_rugosa Rorug02G0428900
rosa_samantha Rh2DG513400
rosa_wichuraiana Rw2G040150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 680, 1098
Acc16I TGCGCA 1 cut(s) 993
Acc36I ACCTGC 1 cut(s) 405
AccB7I CCANNNNNTGG 1 cut(s) 413
AccI GTMKAC 1 cut(s) 788
AciI CCGC 2 cut(s) 921, 935
AcoI YGGCCR 2 cut(s) 66, 1979
AcsI RAATTY 6 cut(s) 240, 424, 1032, 1202, 1315, 1701
AfaI GTAC 5 cut(s) 326, 387, 418, 1724, 2091
AfiI CCNNNNNNNGG 3 cut(s) 413, 607, 1988
AjnI CCWGG 3 cut(s) 68, 389, 499
Alw21I GWGCWC 4 cut(s) 20, 50, 1483, 2125
Alw26I GTCTC 2 cut(s) 751, 1595
AlwNI CAGNNNCTG 2 cut(s) 258, 1790
AoxI GGCC 6 cut(s) 66, 503, 887, 1384, 1646, 1979
ApeKI GCWGC 2 cut(s) 1016, 1424
ApoI RAATTY 6 cut(s) 240, 424, 1032, 1202, 1315, 1701
Asp700I GAANNNNTTC 2 cut(s) 1048, 1876
AspLEI GCGC 3 cut(s) 358, 994, 2071
AspS9I GGNCC 4 cut(s) 503, 671, 1646, 1991
AsuC2I CCSGG 1 cut(s) 1312
AsuHPI GGTGA 7 cut(s) 14, 23, 82, 305, 887, 924, 2062
AvaII GGWCC 2 cut(s) 671, 1991
AxyI CCTNAGG 1 cut(s) 2027
BaeI ACNNNNGTAYC 2 cut(s) 369, 402
BalI TGGCCA 1 cut(s) 68
BanII GRGCYC 3 cut(s) 20, 50, 1483
BarI GAAGNNNNNNTAC 2 cut(s) 1663, 1695
BbsI GAAGAC 1 cut(s) 255
Bbv12I GWGCWC 4 cut(s) 20, 50, 1483, 2125
BbvI GCAGC 2 cut(s) 1028, 1411
BceAI ACGGC 1 cut(s) 1966
BcgI CGANNNNNNTGC 2 cut(s) 290, 324
BciT130I CCWGG 3 cut(s) 70, 391, 501
BciVI GTATCC 1 cut(s) 1465
BcnI CCSGG 1 cut(s) 1312
BcoDI GTCTC 2 cut(s) 751, 1595
BfaI CTAG 2 cut(s) 756, 807
BfmI CTRYAG 3 cut(s) 792, 1053, 1782
BfoI RGCGCY 2 cut(s) 359, 2072
BfuAI ACCTGC 1 cut(s) 405
BfuI GTATCC 1 cut(s) 1465
BisI GCNGC 3 cut(s) 921, 1017, 1425
BlsI GCNGC 3 cut(s) 922, 1018, 1426
BmcAI AGTACT 1 cut(s) 326
Bme1390I CCNGG 4 cut(s) 70, 391, 501, 1312
Bme18I GGWCC 2 cut(s) 671, 1991
BmgT120I GGNCC 4 cut(s) 503, 671, 1646, 1991
BmiI GGNNCC 2 cut(s) 395, 1992
BmrFI CCNGG 4 cut(s) 70, 391, 501, 1312
BmrI ACTGGG 2 cut(s) 337, 985
BmsI GCATC 3 cut(s) 832, 991, 1153
BmuI ACTGGG 2 cut(s) 337, 985
BpiI GAAGAC 1 cut(s) 255
BpmI CTGGAG 1 cut(s) 839
Bpu10I CCTNAGC 1 cut(s) 2079
BpuEI CTTGAG 2 cut(s) 1467, 1491
BpuMI CCSGG 1 cut(s) 1312
BsaAI YACGTR 1 cut(s) 1300
BsaI GGTCTC 1 cut(s) 751
BsaJI CCNNGG 6 cut(s) 34, 389, 500, 766, 884, 1708
BsaXI ACNNNNNCTCC 4 cut(s) 831, 861, 2107, 2137
Bsc4I CCNNNNNNNGG 3 cut(s) 413, 607, 1988
Bse1I ACTGG 5 cut(s) 59, 332, 877, 980, 1117
Bse21I CCTNAGG 1 cut(s) 2027
Bse3DI GCAATG 1 cut(s) 1201
BseBI CCWGG 3 cut(s) 70, 391, 501
BseDI CCNNGG 6 cut(s) 34, 389, 500, 766, 884, 1708
BseGI GGATG 6 cut(s) 196, 778, 1192, 1262, 1699, 1718
BseLI CCNNNNNNNGG 3 cut(s) 413, 607, 1988
BseMI GCAATG 1 cut(s) 1201
BseMII CTCAG 2 cut(s) 312, 2070
BseNI ACTGG 5 cut(s) 59, 332, 877, 980, 1117
BseRI GAGGAG 3 cut(s) 98, 101, 639
BseXI GCAGC 2 cut(s) 1028, 1411
BseYI CCCAGC 2 cut(s) 358, 592
BshFI GGCC 6 cut(s) 68, 505, 889, 1386, 1648, 1981
BsiHKAI GWGCWC 4 cut(s) 20, 50, 1483, 2125
BsiSI CCGG 1 cut(s) 1311
BslFI GGGAC 4 cut(s) 125, 1555, 1644, 2004
BslI CCNNNNNNNGG 3 cut(s) 413, 607, 1988
BsmAI GTCTC 2 cut(s) 751, 1595
BsmFI GGGAC 4 cut(s) 125, 1555, 1644, 2004
BsmI GAATGC 2 cut(s) 994, 1859
BsnI GGCC 6 cut(s) 68, 505, 889, 1386, 1648, 1981
Bso31I GGTCTC 1 cut(s) 751
Bsp1286I GDGCHC 4 cut(s) 20, 50, 1483, 2125
Bsp143I GATC 4 cut(s) 282, 581, 1141, 2101
Bsp19I CCATGG 1 cut(s) 34
BspACI CCGC 2 cut(s) 921, 935
BspANI GGCC 6 cut(s) 68, 505, 889, 1386, 1648, 1981
BspCNI CTCAG 2 cut(s) 313, 2071
BspLI GGNNCC 2 cut(s) 395, 1992
BspMAI CTGCAG 1 cut(s) 1057
BspMI ACCTGC 1 cut(s) 405
BspQI GCTCTTC 1 cut(s) 159
BspTNI GGTCTC 1 cut(s) 751
BsrDI GCAATG 1 cut(s) 1201
BsrI ACTGG 5 cut(s) 59, 332, 877, 980, 1117
BssECI CCNNGG 6 cut(s) 34, 389, 500, 766, 884, 1708
BssMI GATC 4 cut(s) 282, 581, 1141, 2101
BssNAI GTATAC 1 cut(s) 789
BssT1I CCWWGG 3 cut(s) 34, 766, 884
Bst1107I GTATAC 1 cut(s) 789
Bst2UI CCWGG 3 cut(s) 70, 391, 501
Bst4CI ACNGT 3 cut(s) 1238, 1569, 1998
Bst6I CTCTTC 3 cut(s) 68, 159, 657
BstAPI GCANNNNNTGC 1 cut(s) 1865
BstBAI YACGTR 1 cut(s) 1300
BstC8I GCNNGC 1 cut(s) 567
BstDEI CTNAG 6 cut(s) 321, 494, 578, 1214, 2027, 2079
BstDSI CCRYGG 2 cut(s) 34, 1708
BstF5I GGATG 6 cut(s) 196, 778, 1192, 1262, 1699, 1718
BstH2I RGCGCY 2 cut(s) 359, 2072
BstHHI GCGC 3 cut(s) 358, 994, 2071
BstKTI GATC 4 cut(s) 285, 584, 1144, 2104
BstMAI GTCTC 2 cut(s) 751, 1595
BstMBI GATC 4 cut(s) 282, 581, 1141, 2101
BstMWI GCNNNNNNNGC 1 cut(s) 1865
BstNI CCWGG 3 cut(s) 70, 391, 501
BstSCI CCNGG 4 cut(s) 68, 389, 499, 1310
BstSFI CTRYAG 3 cut(s) 792, 1053, 1782
BstV1I GCAGC 2 cut(s) 1028, 1411
BstV2I GAAGAC 1 cut(s) 255
BstXI CCANNNNNNTGG 3 cut(s) 287, 476, 1394
BstZ17I GTATAC 1 cut(s) 789
Bsu36I CCTNAGG 1 cut(s) 2027
BsuI GTATCC 1 cut(s) 1465
BsuRI GGCC 6 cut(s) 68, 505, 889, 1386, 1648, 1981
BtgI CCRYGG 2 cut(s) 34, 1708
BtsCI GGATG 6 cut(s) 196, 778, 1192, 1262, 1699, 1718
BtsI GCAGTG 1 cut(s) 1062
BtsIMutI CAGTG 5 cut(s) 973, 1062, 1110, 1565, 2003
BveI ACCTGC 1 cut(s) 405
Cac8I GCNNGC 1 cut(s) 567
CaiI CAGNNNCTG 2 cut(s) 258, 1790
CfoI GCGC 3 cut(s) 358, 994, 2071
Cfr13I GGNCC 4 cut(s) 503, 671, 1646, 1991
Csp6I GTAC 5 cut(s) 325, 386, 417, 1723, 2090
CviAII CATG 9 cut(s) 35, 401, 1073, 1334, 1472, 1497, 1517, 1663, 2033
CviQI GTAC 5 cut(s) 325, 386, 417, 1723, 2090
DdeI CTNAG 6 cut(s) 321, 494, 578, 1214, 2027, 2079
DpnI GATC 4 cut(s) 284, 583, 1143, 2103
DpnII GATC 4 cut(s) 282, 581, 1141, 2101
DraI TTTAAA 1 cut(s) 1638
EaeI YGGCCR 2 cut(s) 66, 1979
Eam1104I CTCTTC 3 cut(s) 68, 159, 657
EarI CTCTTC 3 cut(s) 68, 159, 657
Ecl136II GAGCTC 3 cut(s) 18, 48, 1481
Eco130I CCWWGG 3 cut(s) 34, 766, 884
Eco24I GRGCYC 3 cut(s) 20, 50, 1483
Eco31I GGTCTC 1 cut(s) 751
Eco47I GGWCC 2 cut(s) 671, 1991
Eco53kI GAGCTC 3 cut(s) 18, 48, 1481
Eco81I CCTNAGG 1 cut(s) 2027
EcoICRI GAGCTC 3 cut(s) 18, 48, 1481
EcoRI GAATTC 1 cut(s) 1701
EcoRII CCWGG 3 cut(s) 68, 389, 499
EcoT14I CCWWGG 3 cut(s) 34, 766, 884
EcoT38I GRGCYC 3 cut(s) 20, 50, 1483
ErhI CCWWGG 3 cut(s) 34, 766, 884
FaeI CATG 9 cut(s) 38, 404, 1076, 1337, 1475, 1500, 1520, 1666, 2036
FalI AAGNNNNNCTT 2 cut(s) 717, 749
FaqI GGGAC 4 cut(s) 125, 1555, 1644, 2004
FatI CATG 9 cut(s) 34, 400, 1072, 1333, 1471, 1496, 1516, 1662, 2032
FauNDI CATATG 1 cut(s) 712
FblI GTMKAC 1 cut(s) 788
Fnu4HI GCNGC 3 cut(s) 921, 1017, 1425
FokI GGATG 6 cut(s) 183, 785, 1199, 1249, 1706, 1725
FriOI GRGCYC 3 cut(s) 20, 50, 1483
Fsp4HI GCNGC 3 cut(s) 921, 1017, 1425
FspBI CTAG 2 cut(s) 756, 807
FspI TGCGCA 1 cut(s) 993
GlaI GCGC 3 cut(s) 357, 993, 2070
GluI GCNGC 3 cut(s) 921, 1017, 1425
GsaI CCCAGC 2 cut(s) 362, 596
GsuI CTGGAG 1 cut(s) 839
HaeII RGCGCY 2 cut(s) 359, 2072
HaeIII GGCC 6 cut(s) 68, 505, 889, 1386, 1648, 1981
HapII CCGG 1 cut(s) 1311
HhaI GCGC 3 cut(s) 358, 994, 2071
Hin1II CATG 9 cut(s) 38, 404, 1076, 1337, 1475, 1500, 1520, 1666, 2036
Hin6I GCGC 3 cut(s) 356, 992, 2069
HinP1I GCGC 3 cut(s) 356, 992, 2069
HincII GTYRAC 4 cut(s) 60, 862, 1809, 1836
HindII GTYRAC 4 cut(s) 60, 862, 1809, 1836
HindIII AAGCTT 2 cut(s) 473, 726
HpaII CCGG 1 cut(s) 1311
HphI GGTGA 7 cut(s) 14, 23, 82, 305, 887, 924, 2062
Hpy166II GTNNAC 6 cut(s) 60, 789, 862, 1809, 1836, 2092
Hpy8I GTNNAC 6 cut(s) 60, 789, 862, 1809, 1836, 2092
HpyAV CCTTC 7 cut(s) 136, 171, 611, 1213, 1512, 1583, 1660
HpyCH4III ACNGT 3 cut(s) 1238, 1569, 1998
HpyCH4IV ACGT 4 cut(s) 1299, 1533, 1633, 1910
HpyF10VI GCNNNNNNNGC 1 cut(s) 1865
HpyF3I CTNAG 6 cut(s) 321, 494, 578, 1214, 2027, 2079
HpySE526I ACGT 4 cut(s) 1299, 1533, 1633, 1910
Hsp92II CATG 9 cut(s) 38, 404, 1076, 1337, 1475, 1500, 1520, 1666, 2036
HspAI GCGC 3 cut(s) 356, 992, 2069
Kzo9I GATC 4 cut(s) 282, 581, 1141, 2101
LguI GCTCTTC 1 cut(s) 159
LmnI GCTCC 5 cut(s) 53, 652, 1103, 2023, 2128
Lsp1109I GCAGC 2 cut(s) 1028, 1411
LweI GCATC 3 cut(s) 832, 991, 1153
MaeI CTAG 2 cut(s) 756, 807
MaeII ACGT 4 cut(s) 1299, 1533, 1633, 1910
MaeIII GTNAC 7 cut(s) 293, 549, 719, 900, 1411, 1945, 2061
MalI GATC 4 cut(s) 284, 583, 1143, 2103
MboI GATC 4 cut(s) 282, 581, 1141, 2101
MfeI CAATTG 1 cut(s) 605
MhlI GDGCHC 4 cut(s) 20, 50, 1483, 2125
MlsI TGGCCA 1 cut(s) 68
MluNI TGGCCA 1 cut(s) 68
MlyI GAGTC 4 cut(s) 81, 1133, 1187, 1385
MmeI TCCRAC 2 cut(s) 75, 224
MnlI CCTC 9 cut(s) 116, 119, 122, 424, 660, 794, 1070, 1263, 1743
Mox20I TGGCCA 1 cut(s) 68
MroXI GAANNNNTTC 2 cut(s) 1048, 1876
MscI TGGCCA 1 cut(s) 68
MseI TTAA 6 cut(s) 365, 1025, 1637, 1823, 1953, 1985
MslI CAYNNNNRTG 4 cut(s) 33, 511, 1802, 2048
Msp20I TGGCCA 1 cut(s) 68
MspI CCGG 1 cut(s) 1311
MspR9I CCNGG 4 cut(s) 70, 391, 501, 1312
MunI CAATTG 1 cut(s) 605
Mva1269I GAATGC 2 cut(s) 994, 1859
MvaI CCWGG 3 cut(s) 70, 391, 501
MwoI GCNNNNNNNGC 1 cut(s) 1865
NciI CCSGG 1 cut(s) 1312
NcoI CCATGG 1 cut(s) 34
NdeI CATATG 1 cut(s) 712
NdeII GATC 4 cut(s) 282, 581, 1141, 2101
NlaIII CATG 9 cut(s) 38, 404, 1076, 1337, 1475, 1500, 1520, 1666, 2036
NlaIV GGNNCC 2 cut(s) 395, 1992
NmuCI GTSAC 3 cut(s) 293, 719, 1945
NsbI TGCGCA 1 cut(s) 993
PciSI GCTCTTC 1 cut(s) 159
PctI GAATGC 2 cut(s) 994, 1859
PdmI GAANNNNTTC 2 cut(s) 1048, 1876
PfeI GAWTC 7 cut(s) 1244, 1352, 1558, 1753, 1787, 1794, 2137
PflMI CCANNNNNTGG 1 cut(s) 413
PkrI GCNGC 3 cut(s) 922, 1018, 1426
PleI GAGTC 4 cut(s) 81, 1132, 1186, 1384
PpsI GAGTC 4 cut(s) 81, 1132, 1186, 1384
Ppu21I YACGTR 1 cut(s) 1300
PsiI TTATAA 2 cut(s) 680, 1098
Psp124BI GAGCTC 3 cut(s) 20, 50, 1483
Psp6I CCWGG 3 cut(s) 68, 389, 499
PspFI CCCAGC 2 cut(s) 358, 592
PspGI CCWGG 3 cut(s) 68, 389, 499
PspN4I GGNNCC 2 cut(s) 395, 1992
PspPI GGNCC 4 cut(s) 503, 671, 1646, 1991
PstI CTGCAG 1 cut(s) 1057
PstNI CAGNNNCTG 2 cut(s) 258, 1790
RsaI GTAC 5 cut(s) 326, 387, 418, 1724, 2091
RsaNI GTAC 5 cut(s) 325, 386, 417, 1723, 2090
RseI CAYNNNNRTG 4 cut(s) 33, 511, 1802, 2048
SacI GAGCTC 3 cut(s) 20, 50, 1483
SapI GCTCTTC 1 cut(s) 159
SaqAI TTAA 6 cut(s) 365, 1025, 1637, 1823, 1953, 1985
SatI GCNGC 3 cut(s) 921, 1017, 1425
Sau3AI GATC 4 cut(s) 282, 581, 1141, 2101
Sau96I GGNCC 4 cut(s) 503, 671, 1646, 1991
ScaI AGTACT 1 cut(s) 326
SchI GAGTC 4 cut(s) 81, 1133, 1187, 1385
ScrFI CCNGG 4 cut(s) 70, 391, 501, 1312
SduI GDGCHC 4 cut(s) 20, 50, 1483, 2125
SfaNI GCATC 3 cut(s) 832, 991, 1153
SfcI CTRYAG 3 cut(s) 792, 1053, 1782
SinI GGWCC 2 cut(s) 671, 1991
SmiMI CAYNNNNRTG 4 cut(s) 33, 511, 1802, 2048
SmlI CTYRAG 2 cut(s) 1482, 1506
SmoI CTYRAG 2 cut(s) 1482, 1506
SsiI CCGC 2 cut(s) 921, 935
SspMI CTAG 2 cut(s) 756, 807
SstI GAGCTC 3 cut(s) 20, 50, 1483
StyD4I CCNGG 4 cut(s) 68, 389, 499, 1310
StyI CCWWGG 3 cut(s) 34, 766, 884
TaaI ACNGT 3 cut(s) 1238, 1569, 1998
TaiI ACGT 4 cut(s) 1302, 1536, 1636, 1913
TaqI TCGA 5 cut(s) 44, 459, 1556, 2100, 2135
TatI WGTACW 2 cut(s) 324, 1722
TauI GCSGC 1 cut(s) 923
TfiI GAWTC 7 cut(s) 1244, 1352, 1558, 1753, 1787, 1794, 2137
Tru1I TTAA 6 cut(s) 365, 1025, 1637, 1823, 1953, 1985
Tru9I TTAA 6 cut(s) 365, 1025, 1637, 1823, 1953, 1985
TscAI CASTG 5 cut(s) 980, 1062, 1117, 1572, 2003
TseFI GTSAC 3 cut(s) 293, 719, 1945
TseI GCWGC 2 cut(s) 1016, 1424
Tsp45I GTSAC 3 cut(s) 293, 719, 1945
TspDTI ATGAA 9 cut(s) 17, 417, 699, 725, 789, 1679, 1786, 1866, 1903
TspGWI ACGGA 2 cut(s) 1302, 1697
TspRI CASTG 5 cut(s) 980, 1062, 1117, 1572, 2003
Van91I CCANNNNNTGG 1 cut(s) 413
VpaK11BI GGWCC 2 cut(s) 671, 1991
XapI RAATTY 6 cut(s) 240, 424, 1032, 1202, 1315, 1701
XcmI CCANNNNNNNNNTGG 1 cut(s) 32
XmiI GTMKAC 1 cut(s) 788
XmnI GAANNNNTTC 2 cut(s) 1048, 1876
XspI CTAG 2 cut(s) 756, 807
ZrmI AGTACT 1 cut(s) 326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.