Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0005138

Physical Location & Seq

Genomic Coordinates Forward (+)

1511306 .. 1515555

Gene Structure 4250 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0019200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGAACCATTAAATCAGAAGTCTATAGAGAGAGTGGTTTCACAGAAGGCTTTGCAAATGGGGAGTTCATTTCCATGTCAAATCTGTGTGGTGGGTTTGCTCTGTGGAATCTGTCTTACTTCTTTGTTTATGGCTGCTCTCACTTCATTTGGTACTTTCGAGTTTGGTGGGTTTTCGTTTTCGAACATAGCTGGGGGTGCTTCAGCTGGGCGTTCAAGCTCAGAGTTCATCAACTGCAGTTCTGAACCAATGATAACAGAGAGAGTGGTAGTCGATTCGCTTAGAAGTGAAGAAACCATCAGTAGTGAGAGAACCTCATTATTGTATTCAGCTTGGAGTGCTTTACTAACTGAATCAGATTCTGGAGAAAGTGATTACTTGCGGAGAAATGGACTAAACAGATCCAGTGTGCCAAATGCCCCTCATTTGGAAAACTGCAAGCGGAAAGCACAAGTGTATAAGCGCCTTGATAAACATCCCGAGAATGAGAGCCATCCAACAGCTGCCACAAATGAGCTGTCTAGCTATATTAGGAATCAAGCTATGTCCGAAGCTGCTTATGCTCCTTGGATTACAGGGTCTGACGAAGAAAATTACCCCTCAACACGAAAAGTGCAACGAGACATATGGCTGCATCAGCACCCTTTGAACTGCAGGGATCCTAGTGTAAAGTTTCTTGTAGCTGACTGGGAAAGATTACCTGGATTGGGTATTGGAGCCCAAATTGCTGGAATGTGCGGACTTCTTGCTATTGCAATGAAGGAAAAAAGGGTCCTTGTTACCAACTACTATAATCGAGCTGACCATGATGGTTGCAAAGGTTCATCCAGCTCCAGTTGGTCCTGTTACTTTTTCCCAGAAACATCCCTAGAATGTCGAAATCGTGCATTGGAGCTTATGGAAAGTGAAGATGCCTGGAAAAGTGGCACCATCAAGGCAAAAGATAATTATACTTCAAAGGAAATATGGGCTGGACGAACACCTAGAATATGGGGTGATCCTTGGAGTTATTTGCAACCAACAACAGAAATAAATGGGACTTTGATTGCTTATCATCGCAAAATGGATCGAAGGTGGTGGCGTGCACAGGCGGTACGATACTTGATGCGATTTCAAACCAAGTACACATGTGAATTACTGAATGTTGCTCGCCATGCGGCATTTGGAAAGCAAGCTGCCAGTATGGTAGTCAGAAATTTCGAGGGGGAATGGTCTAAGGATGTTACAGTGAATGAAAGGTCAGATATTGAAGAGTTTGTTTGGTCTAATCACAAGCCATGGATGCCTAGGCCACTACTGAGCATGCATGTAAGGATGGGAGACAAAGCATGTGAAATGAAGGTAATTGAATTTGAAGGATACATGAGTCTTGCTGACCGCATTAGAAAGCGATTTCCACAGCTCAACAGTGTTTGGCTATCCACTGAAATGCAGGAAGTGATTGATAAATCTAAAGGATACCCTCATTGGGACTTCTACTACACAAATGTGACACGTCAAGTGGGAAACATGACAATGGCTACTTATGAAACAAGTCTTGGTAGAGAAACCAGCACCAACTACCCGCTTGTCAATTTCTTGATGGCAACCGAAGCTGACTTTTTCATTGGAGCGTTGGGTTCAACTTGGTGCTTCCTCATAGATGGAATGAGAAACACTGGAGGGAAAGTTATGGCGGGATACTTGAGTGTCAACAAGGACCGTTTCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0097255

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RPAP3_C TPR_1 TPR_8

Protein Analysis

570

Amino Acids

64.83

Weight (kDa)

7.86

Isoelectric Point (pI)

43.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005138)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56440 AT1G56440
fragaria_vesca	FvH4_6g07471 FvH4_6g07471 FvH4_6g07471 FvH4_6g07471 FvH4_6g07471 FvH4_6g07471
malus_domestica	MD12G1205500.v1.1
prunus_persica	Prupe.3G076000_v2.0.a1 Prupe.3G076000_v2.0.a1 Prupe.3G076000_v2.0.a1 Prupe.3G076000_v2.0.a1
pyrus_communis	pycom12g19340
rosa_chinensis	RchiOBHm_Chr3g0457141 RchiOBHm_Chr3g0457161 RchiOBHm_Chr3g0457171
rosa_laevigata	RLG00000025245
rosa_roxburghii	Rroxscaffold_6G00422140 Rroxscaffold_6G00422150
rosa_rugosa	Rorug03G0019200 Rorug03G0019200 Rorug03G0019200
rosa_samantha	Rh3AG079000 Rh3BG080700 Rh3CG080800 Rh3DG082600 Rh3DG082700
rosa_wichuraiana	Rw3G006780 Rw3G006790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	926
AciI	CCGC	8 cut(s)	382, 442, 738, 1091, 1157, 1378, 1565, 1676
AclWI	GGATC	5 cut(s)	396, 653, 666, 992, 1074
AcsI	RAATTY	2 cut(s)	1195, 1349
AcuI	CTGAAG	1 cut(s)	186
AfaI	GTAC	3 cut(s)	154, 1095, 1124
AfiI	CCNNNNNNNGG	3 cut(s)	427, 707, 1468
AflIII	ACRYGT	2 cut(s)	1127, 1493
AgsI	TTSAA	8 cut(s)	216, 649, 957, 1115, 1250, 1349, 1355, 1623
AjiI	CACGTC	1 cut(s)	1496
AjnI	CCWGG	2 cut(s)	700, 914
AjuI	GAANNNNNNNTTGG	2 cut(s)	1521, 1553
AleI	CACNNNNGTG	1 cut(s)	1487
Alw21I	GWGCWC	1 cut(s)	1087
Alw26I	GTCTC	2 cut(s)	615, 1314
Alw44I	GTGCAC	1 cut(s)	1083
AlwI	GGATC	5 cut(s)	396, 653, 666, 992, 1074
AlwNI	CAGNNNCTG	2 cut(s)	362, 581
Ama87I	CYCGRG	1 cut(s)	479
AoxI	GGCC	1 cut(s)	1289
ApaLI	GTGCAC	1 cut(s)	1083
ApeKI	GCWGC	5 cut(s)	134, 503, 554, 631, 1175
ApoI	RAATTY	2 cut(s)	1195, 1349
ArsI	GACNNNNNNTTYG	2 cut(s)	503, 535
AspA2I	CCTAGG	1 cut(s)	1286
AspLEI	GCGC	1 cut(s)	465
AspS9I	GGNCC	3 cut(s)	772, 840, 1699
AsuHPI	GGTGA	1 cut(s)	1007
AsuII	TTCGAA	1 cut(s)	182
AvaI	CYCGRG	1 cut(s)	479
AvaII	GGWCC	3 cut(s)	772, 840, 1699
AvrII	CCTAGG	1 cut(s)	1286
BaeGI	GKGCMC	1 cut(s)	1087
BaeI	ACNNNNGTAYC	4 cut(s)	1351, 1384, 1672, 1705
BamHI	GGATCC	1 cut(s)	658
BanI	GGYRCC	1 cut(s)	926
BanII	GRGCYC	1 cut(s)	721
Bbv12I	GWGCWC	1 cut(s)	1087
BbvI	GCAGC	5 cut(s)	121, 490, 541, 618, 1162
BccI	CCATC	7 cut(s)	305, 501, 803, 938, 1309, 1576, 1637
BciT130I	CCWGG	2 cut(s)	702, 916
BciVI	GTATCC	3 cut(s)	1352, 1451, 1673
BcoDI	GTCTC	2 cut(s)	615, 1314
BfaI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
BfmI	CTRYAG	3 cut(s)	24, 235, 652
BfoI	RGCGCY	1 cut(s)	466
BfuI	GTATCC	3 cut(s)	1352, 1451, 1673
BisI	GCNGC	6 cut(s)	135, 504, 555, 632, 1158, 1176
BlnI	CCTAGG	1 cut(s)	1286
BlsI	GCNGC	6 cut(s)	136, 505, 556, 633, 1159, 1177
Bme1390I	CCNGG	2 cut(s)	702, 916
Bme18I	GGWCC	3 cut(s)	772, 840, 1699
BmeT110I	CYCGRG	1 cut(s)	479
BmgBI	CACGTC	1 cut(s)	1496
BmgT120I	GGNCC	3 cut(s)	772, 840, 1699
BmiI	GGNNCC	5 cut(s)	6, 660, 718, 773, 928
BmrFI	CCNGG	2 cut(s)	702, 916
BmrI	ACTGGG	1 cut(s)	697
BmsI	GCATC	4 cut(s)	643, 901, 1095, 1272
BmuI	ACTGGG	1 cut(s)	697
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	3 cut(s)	384, 817, 1680
Bpu14I	TTCGAA	1 cut(s)	182
BpuEI	CTTGAG	1 cut(s)	1705
BsaBI	GATNNNNATC	1 cut(s)	474
BsaJI	CCNNGG	4 cut(s)	566, 1001, 1277, 1286
BsaXI	ACNNNNNCTCC	2 cut(s)	1653, 1683
Bsc4I	CCNNNNNNNGG	3 cut(s)	427, 707, 1468
Bse1I	ACTGG	5 cut(s)	405, 692, 834, 1179, 1663
Bse3DI	GCAATG	1 cut(s)	762
Bse8I	GATNNNNATC	1 cut(s)	474
BseBI	CCWGG	2 cut(s)	702, 916
BseDI	CCNNGG	4 cut(s)	566, 1001, 1277, 1286
BseGI	GGATG	7 cut(s)	475, 493, 824, 863, 1225, 1287, 1320
BseJI	GATNNNNATC	1 cut(s)	474
BseLI	CCNNNNNNNGG	3 cut(s)	427, 707, 1468
BseMI	GCAATG	1 cut(s)	762
BseMII	CTCAG	2 cut(s)	234, 1289
BseNI	ACTGG	5 cut(s)	405, 692, 834, 1179, 1663
BseSI	GKGCMC	1 cut(s)	1087
BseXI	GCAGC	5 cut(s)	121, 490, 541, 618, 1162
BseYI	CCCAGC	2 cut(s)	191, 206
BshFI	GGCC	1 cut(s)	1291
BshNI	GGYRCC	1 cut(s)	926
BsiHKAI	GWGCWC	1 cut(s)	1087
BsiHKCI	CYCGRG	1 cut(s)	479
BslFI	GGGAC	2 cut(s)	1051, 1484
BslI	CCNNNNNNNGG	3 cut(s)	427, 707, 1468
BsmAI	GTCTC	2 cut(s)	615, 1314
BsmFI	GGGAC	2 cut(s)	1051, 1484
BsnI	GGCC	1 cut(s)	1291
BsoBI	CYCGRG	1 cut(s)	479
Bsp119I	TTCGAA	1 cut(s)	182
Bsp1286I	GDGCHC	2 cut(s)	721, 1087
Bsp143I	GATC	4 cut(s)	401, 658, 997, 1066
Bsp19I	CCATGG	1 cut(s)	1277
BspACI	CCGC	8 cut(s)	382, 442, 738, 1091, 1157, 1378, 1565, 1676
BspANI	GGCC	1 cut(s)	1291
BspCNI	CTCAG	2 cut(s)	233, 1290
BspLI	GGNNCC	5 cut(s)	6, 660, 718, 773, 928
BspMAI	CTGCAG	2 cut(s)	239, 656
BspPI	GGATC	5 cut(s)	396, 653, 666, 992, 1074
BspT104I	TTCGAA	1 cut(s)	182
BspT107I	GGYRCC	1 cut(s)	926
BsrDI	GCAATG	1 cut(s)	762
BsrI	ACTGG	5 cut(s)	405, 692, 834, 1179, 1663
BssECI	CCNNGG	4 cut(s)	566, 1001, 1277, 1286
BssMI	GATC	4 cut(s)	401, 658, 997, 1066
BssT1I	CCWWGG	4 cut(s)	566, 1001, 1277, 1286
Bst2UI	CCWGG	2 cut(s)	702, 916
Bst4CI	ACNGT	3 cut(s)	1228, 1409, 1703
Bst6I	CTCTTC	1 cut(s)	1245
BstBI	TTCGAA	1 cut(s)	182
BstC8I	GCNNGC	5 cut(s)	440, 1083, 1150, 1173, 1304
BstDEI	CTNAG	4 cut(s)	220, 281, 1215, 1298
BstDSI	CCRYGG	1 cut(s)	1277
BstF5I	GGATG	7 cut(s)	475, 493, 824, 863, 1225, 1287, 1320
BstH2I	RGCGCY	1 cut(s)	466
BstHHI	GCGC	1 cut(s)	465
BstKTI	GATC	4 cut(s)	404, 661, 1000, 1069
BstMAI	GTCTC	2 cut(s)	615, 1314
BstMBI	GATC	4 cut(s)	401, 658, 997, 1066
BstMWI	GCNNNNNNNGC	8 cut(s)	197, 338, 560, 637, 725, 1154, 1282, 1592
BstNI	CCWGG	2 cut(s)	702, 916
BstNSI	RCATGY	4 cut(s)	1131, 1306, 1310, 1332
BstSCI	CCNGG	2 cut(s)	700, 914
BstSFI	CTRYAG	3 cut(s)	24, 235, 652
BstSLI	GKGCMC	1 cut(s)	1087
BstV1I	GCAGC	5 cut(s)	121, 490, 541, 618, 1162
BstX2I	RGATCY	2 cut(s)	401, 658
BstXI	CCANNNNNNTGG	1 cut(s)	728
BstYI	RGATCY	2 cut(s)	401, 658
BsuI	GTATCC	3 cut(s)	1352, 1451, 1673
BsuRI	GGCC	1 cut(s)	1291
BtgI	CCRYGG	1 cut(s)	1277
BtgZI	GCGATG	1 cut(s)	1040
BtrI	CACGTC	1 cut(s)	1496
BtsCI	GGATG	7 cut(s)	475, 493, 824, 863, 1225, 1287, 1320
BtsIMutI	CAGTG	5 cut(s)	412, 1233, 1414, 1422, 1656
Cac8I	GCNNGC	5 cut(s)	440, 1083, 1150, 1173, 1304
CaiI	CAGNNNCTG	2 cut(s)	362, 581
CfoI	GCGC	1 cut(s)	465
Cfr13I	GGNCC	3 cut(s)	772, 840, 1699
Csp6I	GTAC	3 cut(s)	153, 1094, 1123
CviQI	GTAC	3 cut(s)	153, 1094, 1123
DdeI	CTNAG	4 cut(s)	220, 281, 1215, 1298
DpnI	GATC	4 cut(s)	403, 660, 999, 1068
DpnII	GATC	4 cut(s)	401, 658, 997, 1066
Eam1104I	CTCTTC	1 cut(s)	1245
EarI	CTCTTC	1 cut(s)	1245
Eco130I	CCWWGG	4 cut(s)	566, 1001, 1277, 1286
Eco24I	GRGCYC	1 cut(s)	721
Eco47I	GGWCC	3 cut(s)	772, 840, 1699
Eco57I	CTGAAG	1 cut(s)	186
Eco88I	CYCGRG	1 cut(s)	479
EcoO109I	RGGNCCY	1 cut(s)	772
EcoRII	CCWGG	2 cut(s)	700, 914
EcoT14I	CCWWGG	4 cut(s)	566, 1001, 1277, 1286
EcoT22I	ATGCAT	1 cut(s)	1308
EcoT38I	GRGCYC	1 cut(s)	721
ErhI	CCWWGG	4 cut(s)	566, 1001, 1277, 1286
FaqI	GGGAC	2 cut(s)	1051, 1484
FauI	CCCGC	2 cut(s)	1572, 1669
FauNDI	CATATG	1 cut(s)	626
Fnu4HI	GCNGC	6 cut(s)	135, 504, 555, 632, 1158, 1176
FokI	GGATG	7 cut(s)	462, 480, 811, 850, 1232, 1294, 1327
FriOI	GRGCYC	1 cut(s)	721
Fsp4HI	GCNGC	6 cut(s)	135, 504, 555, 632, 1158, 1176
FspBI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
GlaI	GCGC	1 cut(s)	464
GluI	GCNGC	6 cut(s)	135, 504, 555, 632, 1158, 1176
GsaI	CCCAGC	2 cut(s)	195, 210
GsuI	CTGGAG	3 cut(s)	384, 817, 1680
HaeII	RGCGCY	1 cut(s)	466
HaeIII	GGCC	1 cut(s)	1291
HhaI	GCGC	1 cut(s)	465
Hin6I	GCGC	1 cut(s)	463
HinP1I	GCGC	1 cut(s)	463
HincII	GTYRAC	1 cut(s)	1693
HindII	GTYRAC	1 cut(s)	1693
HinfI	GANTC	6 cut(s)	108, 275, 353, 359, 535, 1366
HphI	GGTGA	1 cut(s)	1007
Hpy166II	GTNNAC	3 cut(s)	1085, 1125, 1693
Hpy188I	TCNGA	8 cut(s)	18, 223, 244, 358, 550, 583, 1193, 1243
Hpy188III	TCNNGA	3 cut(s)	363, 479, 1579
Hpy8I	GTNNAC	3 cut(s)	1085, 1125, 1693
HpyAV	CCTTC	5 cut(s)	40, 754, 1065, 1333, 1349
HpyCH4III	ACNGT	3 cut(s)	1228, 1409, 1703
HpyCH4IV	ACGT	1 cut(s)	1495
HpyF10VI	GCNNNNNNNGC	8 cut(s)	197, 338, 560, 637, 725, 1154, 1282, 1592
HpyF3I	CTNAG	4 cut(s)	220, 281, 1215, 1298
HpySE526I	ACGT	1 cut(s)	1495
HspAI	GCGC	1 cut(s)	463
Kzo9I	GATC	4 cut(s)	401, 658, 997, 1066
LmnI	GCTCC	5 cut(s)	568, 716, 836, 892, 1610
Lsp1109I	GCAGC	5 cut(s)	121, 490, 541, 618, 1162
LweI	GCATC	4 cut(s)	643, 901, 1095, 1272
MaeI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
MaeII	ACGT	1 cut(s)	1495
MaeIII	GTNAC	4 cut(s)	778, 845, 1222, 1489
MalI	GATC	4 cut(s)	403, 660, 999, 1068
MboI	GATC	4 cut(s)	401, 658, 997, 1066
MboII	GAAGA	4 cut(s)	302, 599, 920, 1262
MflI	RGATCY	2 cut(s)	401, 658
MhlI	GDGCHC	2 cut(s)	721, 1087
MluCI	AATT	8 cut(s)	592, 723, 946, 1133, 1195, 1344, 1349, 1573
MlyI	GAGTC	1 cut(s)	1375
MmeI	TCCRAC	1 cut(s)	521
MnlI	CCTC	7 cut(s)	325, 432, 610, 1195, 1473, 1646, 1655
Mph1103I	ATGCAT	1 cut(s)	1308
MseI	TTAA	1 cut(s)	11
MslI	CAYNNNNRTG	4 cut(s)	73, 1427, 1487, 1514
MspA1I	CMGCKG	2 cut(s)	206, 503
MspR9I	CCNGG	2 cut(s)	702, 916
MvaI	CCWGG	2 cut(s)	702, 916
MwoI	GCNNNNNNNGC	8 cut(s)	197, 338, 560, 637, 725, 1154, 1282, 1592
NcoI	CCATGG	1 cut(s)	1277
NdeI	CATATG	1 cut(s)	626
NdeII	GATC	4 cut(s)	401, 658, 997, 1066
NlaIV	GGNNCC	5 cut(s)	6, 660, 718, 773, 928
NmuCI	GTSAC	1 cut(s)	1489
NsiI	ATGCAT	1 cut(s)	1308
NspI	RCATGY	4 cut(s)	1131, 1306, 1310, 1332
NspV	TTCGAA	1 cut(s)	182
OliI	CACNNNNGTG	1 cut(s)	1487
PaeI	GCATGC	1 cut(s)	1306
PciI	ACATGT	1 cut(s)	1127
PfeI	GAWTC	5 cut(s)	108, 275, 353, 359, 535
PkrI	GCNGC	6 cut(s)	136, 505, 556, 633, 1159, 1177
PleI	GAGTC	1 cut(s)	1374
PpsI	GAGTC	1 cut(s)	1374
PpuMI	RGGWCCY	1 cut(s)	772
PscI	ACATGT	1 cut(s)	1127
Psp5II	RGGWCCY	1 cut(s)	772
Psp6I	CCWGG	2 cut(s)	700, 914
PspFI	CCCAGC	2 cut(s)	191, 206
PspGI	CCWGG	2 cut(s)	700, 914
PspN4I	GGNNCC	5 cut(s)	6, 660, 718, 773, 928
PspPI	GGNCC	3 cut(s)	772, 840, 1699
PspPPI	RGGWCCY	1 cut(s)	772
PstI	CTGCAG	2 cut(s)	239, 656
PstNI	CAGNNNCTG	2 cut(s)	362, 581
PsuI	RGATCY	2 cut(s)	401, 658
PvuII	CAGCTG	2 cut(s)	206, 503
RsaI	GTAC	3 cut(s)	154, 1095, 1124
RsaNI	GTAC	3 cut(s)	153, 1094, 1123
RseI	CAYNNNNRTG	4 cut(s)	73, 1427, 1487, 1514
SaqAI	TTAA	1 cut(s)	11
SatI	GCNGC	6 cut(s)	135, 504, 555, 632, 1158, 1176
Sau3AI	GATC	4 cut(s)	401, 658, 997, 1066
Sau96I	GGNCC	3 cut(s)	772, 840, 1699
SchI	GAGTC	1 cut(s)	1375
ScrFI	CCNGG	2 cut(s)	702, 916
SduI	GDGCHC	2 cut(s)	721, 1087
SfaNI	GCATC	4 cut(s)	643, 901, 1095, 1272
SfcI	CTRYAG	3 cut(s)	24, 235, 652
SfuI	TTCGAA	1 cut(s)	182
SinI	GGWCC	3 cut(s)	772, 840, 1699
SmiMI	CAYNNNNRTG	4 cut(s)	73, 1427, 1487, 1514
SmlI	CTYRAG	1 cut(s)	1684
SmoI	CTYRAG	1 cut(s)	1684
SphI	GCATGC	1 cut(s)	1306
Sse9I	AATT	8 cut(s)	592, 723, 946, 1133, 1195, 1344, 1349, 1573
SsiI	CCGC	8 cut(s)	382, 442, 738, 1091, 1157, 1378, 1565, 1676
SspMI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
StyD4I	CCNGG	2 cut(s)	700, 914
StyI	CCWWGG	4 cut(s)	566, 1001, 1277, 1286
TaaI	ACNGT	3 cut(s)	1228, 1409, 1703
TaiI	ACGT	1 cut(s)	1498
TaqI	TCGA	7 cut(s)	159, 182, 273, 796, 877, 1069, 1200
TasI	AATT	8 cut(s)	592, 723, 946, 1133, 1195, 1344, 1349, 1573
TatI	WGTACW	1 cut(s)	1122
TauI	GCSGC	1 cut(s)	1160
TfiI	GAWTC	5 cut(s)	108, 275, 353, 359, 535
Tru1I	TTAA	1 cut(s)	11
Tru9I	TTAA	1 cut(s)	11
TscAI	CASTG	5 cut(s)	412, 1233, 1414, 1429, 1663
TseFI	GTSAC	1 cut(s)	1489
TseI	GCWGC	5 cut(s)	134, 503, 554, 631, 1175
Tsp45I	GTSAC	1 cut(s)	1489
TspDTI	ATGAA	9 cut(s)	57, 135, 217, 773, 813, 1248, 1352, 1542, 1594
TspRI	CASTG	5 cut(s)	412, 1233, 1414, 1429, 1663
VneI	GTGCAC	1 cut(s)	1083
VpaK11BI	GGWCC	3 cut(s)	772, 840, 1699
XapI	RAATTY	2 cut(s)	1195, 1349
XceI	RCATGY	4 cut(s)	1131, 1306, 1310, 1332
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1160
XmaJI	CCTAGG	1 cut(s)	1286
XspI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
Zsp2I	ATGCAT	1 cut(s)	1308

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.