Rorug03G0109200

Protein of unknown function (DUF4050)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0012852
Physical Location & Seq
Forward (+)
8773652 .. 8784800
11149 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0109200.1

Sequence Viewer

Length: 3162 bp
ATGAAAACTTGGCTACATTTCTTCCTTCTCTTAGTCACACTCTGGGTTAGTATCATCATCATCATCATCCCTCTAGTTCATAGCAAGTGTATTCCAGACCAGCAACAATCATTGCTCGATTTCAAGAGCAGCCTTTTATTCAATTCCTCTCTTTCCTCCAAGCTTATTACCTGGAACTCAACTACCGATTGCTGCTATTGGGTCGGAGTTACCTGCAGCACCAATGGCCATGTTCTGGGTATCGACCTCAATAATGAATCTATCTCAGGTAGCATTGACAATTCCAGCAGTCTCTTCCATCTTCAAAATCTTCAAAGCCTCAATTTGGCGTACAACGAACTTGGCAACGGCTCTCAATCAATTCCATCTGCAGTCGGGCAGCTCATGAATTTGAGGTATCTAAATTTATCTGAAAATGCTTATTCAGGGAAAATTCCAATTGAGATTTCACGCTTGACGAGATTGGTAGTTCTTGATATTTCTGCAAATTTATTCTGGCCTGAGGAATTTCAAGGGCCTGAGTTCAAACTTGAGATCTCGAATTTACACAAGCTGGTAGAGAACCTCACAGAGCTTAGAGAGTTGTATCTTGATGATGTCCAAATATCAGCAGAGGGGAGTGAGTGGTGCCAAGCCATATCATCTTCCCTTCCCAACCTCAGGGTGTTGAGCTTGTCCTCTTGTAATCTTTCAGGCCCTTTTCACGAGTCTCTTGCTGACCTCCGATCTCTCTCCGTGATTCAATTGGGATGGAACAATATCTCTGCTCCAGTTCCAGCATTCTTTGCCAACTTTTCAAACTTGACATCCTTGATTCTCTATGATTGTAATTTGCAAGGAACATTTCCGAAAGAGATCTTTCAGTTACCTTCTCTTCGTAAGATTAGCCTTTTTGAAAATGAAAAACTTGATGGTTGCTTGCCAGAATTTCCAAAGAATGGATCTCTTCAATACCTGGATCTAAGCGGGACTAATTTTTCAGGGGCATTACCAAACTCTATTGGCAACCTCAAAATGTTGTCCATATTTGGTATTGGAGACTGTAATTTCACGGGATCAATCCCCAAGTCAATGACAAACCTTACGCAATTGGTTTATTTGTCGATGTCTGGAAACAACTTTGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATCTAGAAAGCATATACCTCTCTTCAAATGGTCTGACAGGTAATATTAATTGCATCCACTGGAAAAACCTTACTAATCTATCCTATCTCTCCTTAGCTGGCAACATGCTCGATGGGAATATTCCATCAGCTCTGTTTTCTCTTCCCTTGCTGGATTTGATAGATCTTTCCGACAACCAATTCTTTGGTCATTTTCCTGAAATTTCTAATCTCTCATCCTACTCTGTCGAAGGGCCAATACCCATGTCTATCTCTAATTTACGGGGTCTTACTGATCTTGATCTTTCTTCAAATAATTTCAGTGGCTCATTTCCTCTAGATGGTCTTCAACATCTGAGAAATCTTTATTATCTTGATCTTTCACACAATAGCTTGCTTCTTAGCCATGATGCTACCAATTTCTCATATTCCCACTTTCCTCAGTTTGAATATTTGTTGTTGGCTTCATTAAACTTGAGAACATTCCCTGATTTCTTGAGAAATCAATCTGAATTACGTTCTTTAGATCTTTCAGATAACCAGATACAGGGCAAGATACCCAACTGGATTTGGAGGTCCAATAATCTCTTTTACCTAAATCTTTCGTGTAACTCTCTAGAAACTCTAGAAGGTCATACAATCAATCTCACTTCTATAGGACTCCTTGACCTTCATTCCAACAAGCTTCATGGGGAAATCCCAATTTCATCGTCACCTAACATGTATTATCTGGATTACTCAAGGAACAACTTCAGCTCTACCATACCAACTACCATTGAAGATATGATTCTTCACACCATATTCTTCTCTGTTGCTAGCAATAACCTTCAGGGGATCATCCCAGGATCAATATGCAATTCAGGTAGCCTTGAGGTTCTTGATATGTCCAACAATTCCTTGAGTGGCACCGTACCTCACTGCTTGACAGCACTGAGCACTCTTTCGGTACTTAATTTAAGGAGAAACAATCTTACAAATGTAGACATGTTTTCTCACAATTGTAGTTTGCAGACTCTAGACATAAGTGAAAATAAGATACAAGGTCAGTTTCCAAAATCACTCGTTAAGTGCCCTCAGTTAAAGGTTTTGAATGTTGGAAAGAATCAAATAACAGGTCGATTTCCCTGCTTTTTGAAGAACACATCCACCTTGCGTGTCCTTGTCTTGCGATCCAATAAATTTTATGGCGGCATTGAATGTCCCAACACTACTGGCACCTGGCCGATGCTTCAAATCATAGACCTAGCTCATAACAATTTTAGTGGAAATGTACCAGGGAGAATGTTGACAACTTGGCAGGCAATGACAGATAATGAAGATGATGCCCCATCAAAGCTCAATCACCTTCAATTCCAGGACAGCTTCAGTTCGATTTATTATCAGGATACAGTTACGATTACCAACAAAGGTATCGAGATAGAGCTGATAAAGATTATAACAATCTTCACCTCGATCGATTTCTCTTGCAACAAGTTCAACGGATCAATACCTTATGAAATTGGAGAACTCAACTCACTGCATATCCTCAACTTGTCCAATAATGCTTTCACAGGTGCAATTCCACCATCATTAAGCAACTTGAGTCAGCTAGAGTCTTTAGACCTCTCACAGAACACCTTGAGTGGTCAAATTCCACCACAGCTTACAAAACTCACTTTCCTTTCGTTCTTGAATCTGTCACATAATCAATTGGTCGGCAGGATTCCGAGCATTAACCAGTTTCCAACATTTTCAAAATCTTCCTTTGAAGGAAACAAAGATTTATTCGGGCCTCCTTTGACCGAAGAAAACAGAACAAGCCATCCAAGTTGTGGAGATGAGATTGATTGGAATATCATCATTGTTGAGATTGGATTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTTTATTTTGCAAGAGATGGAGAAAATGGTATTATAGAGCTATGTATAGCATTCTTGTGAAGATATTTCCTCAACTGGAACACAGGTTTGGTCATCACAGAAGACATGTGTATATAGGCGCAAGGTACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4050

Protein Analysis

1053

Amino Acids

117.64

Weight (kDa)

5.74

Isoelectric Point (pI)

40.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 73 1.8e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 277 2.3e-09 Leucine-rich repeat region
LRR_14 PF23598 315 - 389 1.8e-07 Leucine-rich repeat region
LRR_14 PF23598 378 - 588 3.5e-07 Leucine-rich repeat region
LRR_8 PF13855 549 - 607 3.9e-06 Leucine rich repeat
LRR_8 PF13855 649 - 702 7.5e-07 Leucine rich repeat
LRR_8 PF13855 691 - 748 9.5e-09 Leucine rich repeat
LRR_8 PF13855 883 - 942 1.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012852)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03440 AT5G03440 AT5G03440
fragaria_vesca FvH4_6g16540
malus_domestica MD04G1091600.v1.1 MD12G1109500.v1.1
prunus_persica Prupe.7G128200_v2.0.a1
pyrus_communis pycom04g08630
rosa_chinensis RchiOBHm_Chr3g0470451
rosa_laevigata RLG00000024266
rosa_multiflora Rmu_sc0003381.1_g000005
rosa_roxburghii Rroxscaffold_6G00410790
rosa_rugosa Rorug03G0109200
rosa_samantha Rh3AG159600 Rh3BG184100 Rh3CG174600 Rh3DG190800
rosa_wichuraiana Rw3G015100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2570
Acc36I ACCTGC 1 cut(s) 221
AccB1I GGYRCC 3 cut(s) 627, 2039, 2348
AccB7I CCANNNNNTGG 3 cut(s) 235, 938, 2945
AccI GTMKAC 1 cut(s) 2115
AciI CCGC 2 cut(s) 966, 2322
AclWI GGATC 7 cut(s) 949, 966, 1063, 1976, 1987, 2298, 2623
AcoI YGGCCR 2 cut(s) 226, 2354
AcuI CTGAAG 3 cut(s) 1870, 1946, 2482
AfaI GTAC 5 cut(s) 332, 2046, 2082, 2406, 3149
AfiI CCNNNNNNNGG 7 cut(s) 235, 325, 660, 938, 1475, 1681, 2945
AflIII ACRYGT 4 cut(s) 1854, 2118, 2993, 3127
AjnI CCWGG 6 cut(s) 170, 954, 1975, 2351, 2407, 2487
AjuI GAANNNNNNNTTGG 6 cut(s) 430, 462, 2663, 2695, 3093, 3125
AloI GAACNNNNNNTCC 2 cut(s) 2920, 2952
Alw21I GWGCWC 1 cut(s) 2072
Alw26I GTCTC 4 cut(s) 296, 714, 1032, 3148
AlwI GGATC 7 cut(s) 949, 966, 1063, 1976, 1987, 2298, 2623
AoxI GGCC 8 cut(s) 226, 497, 515, 694, 1149, 1388, 2354, 2903
ApeKI GCWGC 4 cut(s) 129, 192, 216, 379
ArsI GACNNNNNNTTYG 2 cut(s) 2233, 2265
AseI ATTAAT 1 cut(s) 1203
Asp700I GAANNNNTTC 1 cut(s) 1883
AspLEI GCGC 1 cut(s) 3143
AspS9I GGNCC 6 cut(s) 515, 695, 1149, 1388, 1710, 2903
AsuHPI GGTGA 3 cut(s) 1839, 2468, 2572
AsuNHI GCTAGC 1 cut(s) 1949
AvaII GGWCC 1 cut(s) 1710
AxyI CCTNAGG 2 cut(s) 501, 659
BaeGI GKGCMC 1 cut(s) 2207
BaeI ACNNNNGTAYC 2 cut(s) 2527, 2560
BalI TGGCCA 1 cut(s) 228
BanI GGYRCC 3 cut(s) 627, 2039, 2348
BarI GAAGNNNNNNTAC 2 cut(s) 1377, 1409
BauI CACGAG 1 cut(s) 704
BbsI GAAGAC 2 cut(s) 1472, 3130
Bbv12I GWGCWC 1 cut(s) 2072
BbvI GCAGC 4 cut(s) 141, 179, 228, 391
BceAI ACGGC 2 cut(s) 364, 2996
BcgI CGANNNNNNTGC 6 cut(s) 695, 729, 1246, 1280, 2241, 2275
BciT130I CCWGG 6 cut(s) 172, 956, 1977, 2353, 2409, 2489
BciVI GTATCC 1 cut(s) 2512
BcoDI GTCTC 4 cut(s) 296, 714, 1032, 3148
BfaI CTAG 9 cut(s) 74, 1160, 1472, 1751, 1760, 1950, 2150, 2378, 2723
BfmI CTRYAG 3 cut(s) 214, 369, 1788
BfuAI ACCTGC 1 cut(s) 221
BfuI GTATCC 1 cut(s) 2512
BglII AGATCT 4 cut(s) 534, 855, 1318, 1660
BisI GCNGC 5 cut(s) 130, 193, 217, 380, 2323
BlsI GCNGC 5 cut(s) 131, 194, 218, 381, 2324
Bme1390I CCNGG 6 cut(s) 172, 956, 1977, 2353, 2409, 2489
Bme18I GGWCC 1 cut(s) 1710
BmgT120I GGNCC 6 cut(s) 515, 695, 1149, 1388, 1710, 2903
BmiI GGNNCC 4 cut(s) 629, 1150, 2041, 2350
BmrFI CCNGG 6 cut(s) 172, 956, 1977, 2353, 2409, 2489
BmsI GCATC 4 cut(s) 1218, 1534, 2349, 2446
BmtI GCTAGC 1 cut(s) 1953
BpiI GAAGAC 2 cut(s) 1472, 3130
BpmI CTGGAG 1 cut(s) 753
Bpu10I CCTNAGC 1 cut(s) 1249
BpuEI CTTGAG 8 cut(s) 551, 1630, 1651, 1858, 2024, 2053, 2734, 2773
Bsa29I ATCGAT 1 cut(s) 2589
BsaBI GATNNNNATC 1 cut(s) 1434
BsaJI CCNNGG 2 cut(s) 1975, 2408
Bsc4I CCNNNNNNNGG 7 cut(s) 235, 325, 660, 938, 1475, 1681, 2945
Bse1I ACTGG 7 cut(s) 770, 1220, 1703, 2350, 2851, 3102, 3155
Bse21I CCTNAGG 2 cut(s) 501, 659
Bse3DI GCAATG 2 cut(s) 110, 2442
Bse8I GATNNNNATC 1 cut(s) 1434
BseBI CCWGG 6 cut(s) 172, 956, 1977, 2353, 2409, 2489
BseCI ATCGAT 1 cut(s) 2589
BseDI CCNNGG 2 cut(s) 1975, 2408
BseGI GGATG 8 cut(s) 66, 755, 806, 1209, 1370, 1971, 2276, 2935
BseJI GATNNNNATC 1 cut(s) 1434
BseLI CCNNNNNNNGG 7 cut(s) 235, 325, 660, 938, 1475, 1681, 2945
BseMI GCAATG 2 cut(s) 110, 2442
BseMII CTCAG 8 cut(s) 279, 492, 510, 673, 1481, 1589, 2057, 2222
BseNI ACTGG 7 cut(s) 770, 1220, 1703, 2350, 2851, 3102, 3155
BseSI GKGCMC 1 cut(s) 2207
BseXI GCAGC 4 cut(s) 141, 179, 228, 391
Bsh1285I CGRYCG 1 cut(s) 2589
BshFI GGCC 8 cut(s) 228, 499, 517, 696, 1151, 1390, 2356, 2905
BshNI GGYRCC 3 cut(s) 627, 2039, 2348
BshVI ATCGAT 1 cut(s) 2589
BsiEI CGRYCG 1 cut(s) 2589
BsiHKAI GWGCWC 1 cut(s) 2072
BslFI GGGAC 2 cut(s) 982, 2319
BslI CCNNNNNNNGG 7 cut(s) 235, 325, 660, 938, 1475, 1681, 2945
BsmAI GTCTC 4 cut(s) 296, 714, 1032, 3148
BsmBI CGTCTC 1 cut(s) 3148
BsmFI GGGAC 2 cut(s) 982, 2319
BsmI GAATGC 2 cut(s) 779, 3072
BsnI GGCC 8 cut(s) 228, 499, 517, 696, 1151, 1390, 2356, 2905
Bsp1286I GDGCHC 2 cut(s) 2072, 2207
BspACI CCGC 2 cut(s) 966, 2322
BspANI GGCC 8 cut(s) 228, 499, 517, 696, 1151, 1390, 2356, 2905
BspCNI CTCAG 8 cut(s) 278, 493, 511, 672, 1482, 1588, 2058, 2221
BspDI ATCGAT 1 cut(s) 2589
BspHI TCATGA 1 cut(s) 384
BspLI GGNNCC 4 cut(s) 629, 1150, 2041, 2350
BspMAI CTGCAG 2 cut(s) 218, 373
BspMI ACCTGC 1 cut(s) 221
BspOI GCTAGC 1 cut(s) 1953
BspPI GGATC 7 cut(s) 949, 966, 1063, 1976, 1987, 2298, 2623
BspT107I GGYRCC 3 cut(s) 627, 2039, 2348
BsrDI GCAATG 2 cut(s) 110, 2442
BsrI ACTGG 7 cut(s) 770, 1220, 1703, 2350, 2851, 3102, 3155
BssECI CCNNGG 2 cut(s) 1975, 2408
BssSI CACGAG 1 cut(s) 704
Bst2BI CACGAG 1 cut(s) 704
Bst2UI CCWGG 6 cut(s) 172, 956, 1977, 2353, 2409, 2489
Bst4CI ACNGT 3 cut(s) 1043, 2044, 2524
Bst6I CTCTTC 5 cut(s) 299, 879, 951, 1183, 1302
BstAPI GCANNNNNTGC 1 cut(s) 785
BstC8I GCNNGC 5 cut(s) 920, 1255, 1529, 1951, 2433
BstF5I GGATG 8 cut(s) 66, 755, 806, 1209, 1370, 1971, 2276, 2935
BstHHI GCGC 1 cut(s) 3143
BstMAI GTCTC 4 cut(s) 296, 714, 1032, 3148
BstMCI CGRYCG 1 cut(s) 2589
BstMWI GCNNNNNNNGC 2 cut(s) 225, 785
BstNI CCWGG 6 cut(s) 172, 956, 1977, 2353, 2409, 2489
BstNSI RCATGY 5 cut(s) 1264, 1858, 2122, 2997, 3131
BstSCI CCNGG 6 cut(s) 170, 954, 1975, 2351, 2407, 2487
BstSFI CTRYAG 3 cut(s) 214, 369, 1788
BstSLI GKGCMC 1 cut(s) 2207
BstV1I GCAGC 4 cut(s) 141, 179, 228, 391
BstV2I GAAGAC 2 cut(s) 1472, 3130
BstX2I RGATCY 6 cut(s) 534, 855, 941, 958, 1318, 1660
BstXI CCANNNNNNTGG 1 cut(s) 1340
BstYI RGATCY 6 cut(s) 534, 855, 941, 958, 1318, 1660
Bsu15I ATCGAT 1 cut(s) 2589
Bsu36I CCTNAGG 2 cut(s) 501, 659
BsuI GTATCC 1 cut(s) 2512
BsuRI GGCC 8 cut(s) 228, 499, 517, 696, 1151, 1390, 2356, 2905
BsuTUI ATCGAT 1 cut(s) 2589
BtsCI GGATG 8 cut(s) 66, 755, 806, 1209, 1370, 1971, 2276, 2935
BtsI GCAGTG 2 cut(s) 2050, 2648
BtsIMutI CAGTG 6 cut(s) 1150, 1213, 1462, 2050, 2063, 2648
BveI ACCTGC 1 cut(s) 221
Cac8I GCNNGC 5 cut(s) 920, 1255, 1529, 1951, 2433
CciI TCATGA 1 cut(s) 384
CfoI GCGC 1 cut(s) 3143
Cfr13I GGNCC 6 cut(s) 515, 695, 1149, 1388, 1710, 2903
ClaI ATCGAT 1 cut(s) 2589
Csp6I GTAC 5 cut(s) 331, 2045, 2081, 2405, 3148
CspCI CAANNNNNGTGG 2 cut(s) 2377, 2412
CviQI GTAC 5 cut(s) 331, 2045, 2081, 2405, 3148
EaeI YGGCCR 2 cut(s) 226, 2354
Eam1104I CTCTTC 5 cut(s) 299, 879, 951, 1183, 1302
EarI CTCTTC 5 cut(s) 299, 879, 951, 1183, 1302
Eco47I GGWCC 1 cut(s) 1710
Eco57I CTGAAG 3 cut(s) 1870, 1946, 2482
Eco81I CCTNAGG 2 cut(s) 501, 659
EcoO109I RGGNCCY 2 cut(s) 515, 695
EcoRII CCWGG 6 cut(s) 170, 954, 1975, 2351, 2407, 2487
Esp3I CGTCTC 1 cut(s) 3148
FaqI GGGAC 2 cut(s) 982, 2319
FauI CCCGC 1 cut(s) 959
FblI GTMKAC 1 cut(s) 2115
Fnu4HI GCNGC 5 cut(s) 130, 193, 217, 380, 2323
FokI GGATG 8 cut(s) 53, 762, 793, 1196, 1357, 1958, 2263, 2922
Fsp4HI GCNGC 5 cut(s) 130, 193, 217, 380, 2323
FspBI CTAG 9 cut(s) 74, 1160, 1472, 1751, 1760, 1950, 2150, 2378, 2723
GlaI GCGC 1 cut(s) 3142
GluI GCNGC 5 cut(s) 130, 193, 217, 380, 2323
GsuI CTGGAG 1 cut(s) 753
HaeIII GGCC 8 cut(s) 228, 499, 517, 696, 1151, 1390, 2356, 2905
HhaI GCGC 1 cut(s) 3143
Hin6I GCGC 1 cut(s) 3141
HinP1I GCGC 1 cut(s) 3141
HincII GTYRAC 1 cut(s) 2421
HindII GTYRAC 1 cut(s) 2421
HindIII AAGCTT 2 cut(s) 161, 1817
HphI GGTGA 3 cut(s) 1839, 2468, 2572
Hpy166II GTNNAC 2 cut(s) 2116, 2421
Hpy8I GTNNAC 2 cut(s) 2116, 2421
Hpy99I CGWCG 1 cut(s) 3017
HpyCH4III ACNGT 3 cut(s) 1043, 2044, 2524
HpyCH4IV ACGT 2 cut(s) 1651, 3157
HpyF10VI GCNNNNNNNGC 2 cut(s) 225, 785
HpySE526I ACGT 2 cut(s) 1651, 3157
HspAI GCGC 1 cut(s) 3141
LmnI GCTCC 1 cut(s) 772
Lsp1109I GCAGC 4 cut(s) 141, 179, 228, 391
LweI GCATC 4 cut(s) 1218, 1534, 2349, 2446
MaeI CTAG 9 cut(s) 74, 1160, 1472, 1751, 1760, 1950, 2150, 2378, 2723
MaeII ACGT 2 cut(s) 1651, 3157
MaeIII GTNAC 8 cut(s) 34, 208, 864, 1742, 1845, 2524, 2811, 3018
MfeI CAATTG 5 cut(s) 438, 743, 1088, 2131, 2822
MflI RGATCY 6 cut(s) 534, 855, 941, 958, 1318, 1660
MhlI GDGCHC 2 cut(s) 2072, 2207
MlsI TGGCCA 1 cut(s) 228
MluNI TGGCCA 1 cut(s) 228
MlyI GAGTC 5 cut(s) 716, 1788, 2140, 2725, 2735
MmeI TCCRAC 6 cut(s) 184, 1350, 1836, 2046, 2209, 2882
Mox20I TGGCCA 1 cut(s) 228
MroXI GAANNNNTTC 1 cut(s) 1883
MscI TGGCCA 1 cut(s) 228
MseI TTAA 8 cut(s) 1203, 1604, 2085, 2090, 2199, 2213, 2705, 2847
MslI CAYNNNNRTG 1 cut(s) 3077
Msp20I TGGCCA 1 cut(s) 228
MspR9I CCNGG 6 cut(s) 172, 956, 1977, 2353, 2409, 2489
MunI CAATTG 5 cut(s) 438, 743, 1088, 2131, 2822
Mva1269I GAATGC 2 cut(s) 779, 3072
MvaI CCWGG 6 cut(s) 172, 956, 1977, 2353, 2409, 2489
MwoI GCNNNNNNNGC 2 cut(s) 225, 785
NheI GCTAGC 1 cut(s) 1949
NlaIV GGNNCC 4 cut(s) 629, 1150, 2041, 2350
NmuCI GTSAC 4 cut(s) 34, 1845, 2811, 3018
NspI RCATGY 5 cut(s) 1264, 1858, 2122, 2997, 3131
PagI TCATGA 1 cut(s) 384
PciI ACATGT 4 cut(s) 1854, 2118, 2993, 3127
PctI GAATGC 2 cut(s) 779, 3072
PdmI GAANNNNTTC 1 cut(s) 1883
PfeI GAWTC 8 cut(s) 257, 739, 814, 1156, 1921, 2236, 2806, 2836
PflMI CCANNNNNTGG 3 cut(s) 235, 938, 2945
PfoI TCCNGGA 1 cut(s) 2487
PkrI GCNGC 5 cut(s) 131, 194, 218, 381, 2324
Ple19I CGATCG 1 cut(s) 2589
PleI GAGTC 5 cut(s) 715, 1788, 2140, 2724, 2734
PpsI GAGTC 5 cut(s) 715, 1788, 2140, 2724, 2734
PscI ACATGT 4 cut(s) 1854, 2118, 2993, 3127
PshBI ATTAAT 1 cut(s) 1203
PsiI TTATAA 1 cut(s) 2570
Psp6I CCWGG 6 cut(s) 170, 954, 1975, 2351, 2407, 2487
PspGI CCWGG 6 cut(s) 170, 954, 1975, 2351, 2407, 2487
PspN4I GGNNCC 4 cut(s) 629, 1150, 2041, 2350
PspPI GGNCC 6 cut(s) 515, 695, 1149, 1388, 1710, 2903
PstI CTGCAG 2 cut(s) 218, 373
PsuI RGATCY 6 cut(s) 534, 855, 941, 958, 1318, 1660
PvuI CGATCG 1 cut(s) 2589
RsaI GTAC 5 cut(s) 332, 2046, 2082, 2406, 3149
RsaNI GTAC 5 cut(s) 331, 2045, 2081, 2405, 3148
RseI CAYNNNNRTG 1 cut(s) 3077
SaqAI TTAA 8 cut(s) 1203, 1604, 2085, 2090, 2199, 2213, 2705, 2847
SatI GCNGC 5 cut(s) 130, 193, 217, 380, 2323
Sau96I GGNCC 6 cut(s) 515, 695, 1149, 1388, 1710, 2903
SchI GAGTC 5 cut(s) 716, 1788, 2140, 2725, 2735
ScrFI CCNGG 6 cut(s) 172, 956, 1977, 2353, 2409, 2489
SduI GDGCHC 2 cut(s) 2072, 2207
SfaNI GCATC 4 cut(s) 1218, 1534, 2349, 2446
SfcI CTRYAG 3 cut(s) 214, 369, 1788
SinI GGWCC 1 cut(s) 1710
SmiMI CAYNNNNRTG 1 cut(s) 3077
SmlI CTYRAG 8 cut(s) 530, 1609, 1630, 1873, 2003, 2032, 2713, 2752
SmoI CTYRAG 8 cut(s) 530, 1609, 1630, 1873, 2003, 2032, 2713, 2752
SsiI CCGC 2 cut(s) 966, 2322
SspI AATATT 3 cut(s) 1201, 1276, 1586
SspMI CTAG 9 cut(s) 74, 1160, 1472, 1751, 1760, 1950, 2150, 2378, 2723
StyD4I CCNGG 6 cut(s) 170, 954, 1975, 2351, 2407, 2487
TaaI ACNGT 3 cut(s) 1043, 2044, 2524
TaiI ACGT 2 cut(s) 1654, 3160
TaqII GACCGA 1 cut(s) 2930
TauI GCSGC 1 cut(s) 2325
TfiI GAWTC 8 cut(s) 257, 739, 814, 1156, 1921, 2236, 2806, 2836
Tru1I TTAA 8 cut(s) 1203, 1604, 2085, 2090, 2199, 2213, 2705, 2847
Tru9I TTAA 8 cut(s) 1203, 1604, 2085, 2090, 2199, 2213, 2705, 2847
TscAI CASTG 6 cut(s) 1150, 1220, 1462, 2057, 2070, 2655
TseFI GTSAC 4 cut(s) 34, 1845, 2811, 3018
TseI GCWGC 4 cut(s) 129, 192, 216, 379
Tsp45I GTSAC 4 cut(s) 34, 1845, 2811, 3018
TspGWI ACGGA 3 cut(s) 724, 1125, 2628
TspRI CASTG 6 cut(s) 1150, 1220, 1462, 2057, 2070, 2655
Van91I CCANNNNNTGG 3 cut(s) 235, 938, 2945
VpaK11BI GGWCC 1 cut(s) 1710
VspI ATTAAT 1 cut(s) 1203
XbaI TCTAGA 5 cut(s) 1159, 1471, 1750, 1759, 2149
XceI RCATGY 5 cut(s) 1264, 1858, 2122, 2997, 3131
XcmI CCANNNNNNNNNTGG 1 cut(s) 2942
XmiI GTMKAC 1 cut(s) 2115
XmnI GAANNNNTTC 1 cut(s) 1883
XspI CTAG 9 cut(s) 74, 1160, 1472, 1751, 1760, 1950, 2150, 2378, 2723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.