GMC oxidoreductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom10g15180 pycom10g15190 |
| rosa_chinensis | RchiOBHm_Chr3g0474671 |
| rosa_multiflora | Rmu_sc0001353.1_g000047 Rmu_sc0002324.1_g000028 |
| rosa_roxburghii | Rroxscaffold_6G00407000 |
| rosa_rugosa | Rorug03G0142000 |
| rosa_samantha | Rh3AG192800 Rh3BG222700 Rh3CG217400 Rh3DG218300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 151 |
| AccI | GTMKAC | 1 cut(s) | 124 |
| AcoI | YGGCCR | 1 cut(s) | 55 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 151 |
| AluBI | AGCT | 2 cut(s) | 218, 230 |
| AluI | AGCT | 2 cut(s) | 218, 230 |
| AoxI | GGCC | 2 cut(s) | 55, 141 |
| ApeKI | GCWGC | 2 cut(s) | 218, 227 |
| AspS9I | GGNCC | 1 cut(s) | 142 |
| BbvI | GCAGC | 2 cut(s) | 205, 239 |
| BisI | GCNGC | 2 cut(s) | 219, 228 |
| BlsI | GCNGC | 2 cut(s) | 220, 229 |
| BmgT120I | GGNCC | 1 cut(s) | 142 |
| BmiI | GGNNCC | 1 cut(s) | 201 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 151 |
| Bse118I | RCCGGY | 1 cut(s) | 57 |
| BseGI | GGATG | 2 cut(s) | 10, 44 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 151 |
| BseMII | CTCAG | 2 cut(s) | 18, 174 |
| BseXI | GCAGC | 2 cut(s) | 205, 239 |
| BsgI | GTGCAG | 1 cut(s) | 204 |
| BshFI | GGCC | 2 cut(s) | 57, 143 |
| BsiSI | CCGG | 1 cut(s) | 58 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 151 |
| BsnI | GGCC | 2 cut(s) | 57, 143 |
| BspANI | GGCC | 2 cut(s) | 57, 143 |
| BspCNI | CTCAG | 2 cut(s) | 19, 175 |
| BspLI | GGNNCC | 1 cut(s) | 201 |
| BsrFI | RCCGGY | 1 cut(s) | 57 |
| BssAI | RCCGGY | 1 cut(s) | 57 |
| BstC8I | GCNNGC | 3 cut(s) | 59, 166, 180 |
| BstDEI | CTNAG | 2 cut(s) | 27, 183 |
| BstF5I | GGATG | 2 cut(s) | 10, 44 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 58, 86, 161, 224, 227 |
| BstV1I | GCAGC | 2 cut(s) | 205, 239 |
| BsuRI | GGCC | 2 cut(s) | 57, 143 |
| BtsCI | GGATG | 2 cut(s) | 10, 44 |
| Cac8I | GCNNGC | 3 cut(s) | 59, 166, 180 |
| Cfr10I | RCCGGY | 1 cut(s) | 57 |
| Cfr13I | GGNCC | 1 cut(s) | 142 |
| CviAII | CATG | 2 cut(s) | 107, 116 |
| CviJI | RGCY | 8 cut(s) | 57, 61, 80, 143, 155, 182, 218, 230 |
| CviKI_1 | RGCY | 8 cut(s) | 57, 61, 80, 143, 155, 182, 218, 230 |
| DdeI | CTNAG | 2 cut(s) | 27, 183 |
| EaeI | YGGCCR | 1 cut(s) | 55 |
| FaeI | CATG | 2 cut(s) | 110, 119 |
| FaiI | YATR | 6 cut(s) | 64, 66, 83, 108, 117, 162 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 207, 239 |
| FatI | CATG | 2 cut(s) | 106, 115 |
| FblI | GTMKAC | 1 cut(s) | 124 |
| Fnu4HI | GCNGC | 2 cut(s) | 219, 228 |
| FokI | GGATG | 2 cut(s) | 17, 31 |
| Fsp4HI | GCNGC | 2 cut(s) | 219, 228 |
| GluI | GCNGC | 2 cut(s) | 219, 228 |
| HaeIII | GGCC | 2 cut(s) | 57, 143 |
| HapII | CCGG | 1 cut(s) | 58 |
| Hin1II | CATG | 2 cut(s) | 110, 119 |
| HinfI | GANTC | 1 cut(s) | 112 |
| HpaII | CCGG | 1 cut(s) | 58 |
| Hpy166II | GTNNAC | 1 cut(s) | 125 |
| Hpy188I | TCNGA | 1 cut(s) | 28 |
| Hpy188III | TCNNGA | 1 cut(s) | 95 |
| Hpy8I | GTNNAC | 1 cut(s) | 125 |
| HpyCH4V | TGCA | 2 cut(s) | 221, 227 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 58, 86, 161, 224, 227 |
| HpyF3I | CTNAG | 2 cut(s) | 27, 183 |
| Hsp92II | CATG | 2 cut(s) | 110, 119 |
| KroI | GCCGGC | 1 cut(s) | 57 |
| KroNI | GCCGGC | 1 cut(s) | 59 |
| LmnI | GCTCC | 1 cut(s) | 86 |
| LpnPI | CCDG | 4 cut(s) | 71, 80, 164, 216 |
| Lsp1109I | GCAGC | 2 cut(s) | 205, 239 |
| MboII | GAAGA | 1 cut(s) | 95 |
| MlyI | GAGTC | 1 cut(s) | 121 |
| MmeI | TCCRAC | 1 cut(s) | 34 |
| MroNI | GCCGGC | 1 cut(s) | 57 |
| MspA1I | CMGCKG | 1 cut(s) | 230 |
| MspI | CCGG | 1 cut(s) | 58 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 58, 86, 161, 224, 227 |
| NaeI | GCCGGC | 1 cut(s) | 59 |
| NgoMIV | GCCGGC | 1 cut(s) | 57 |
| NlaIII | CATG | 2 cut(s) | 110, 119 |
| NlaIV | GGNNCC | 1 cut(s) | 201 |
| PdiI | GCCGGC | 1 cut(s) | 59 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 151 |
| PkrI | GCNGC | 2 cut(s) | 220, 229 |
| PleI | GAGTC | 1 cut(s) | 120 |
| PpsI | GAGTC | 1 cut(s) | 120 |
| PspN4I | GGNNCC | 1 cut(s) | 201 |
| PspPI | GGNCC | 1 cut(s) | 142 |
| PvuII | CAGCTG | 1 cut(s) | 230 |
| SatI | GCNGC | 2 cut(s) | 219, 228 |
| Sau96I | GGNCC | 1 cut(s) | 142 |
| SchI | GAGTC | 1 cut(s) | 121 |
| SetI | ASST | 3 cut(s) | 161, 220, 232 |
| TseI | GCWGC | 2 cut(s) | 218, 227 |
| TspDTI | ATGAA | 1 cut(s) | 95 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 151 |
| XmiI | GTMKAC | 1 cut(s) | 124 |