Somatic embryogenesis receptor kinase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g23093 |
| malus_domestica | MD13G1125500.v1.1 MD16G1126300.v1.1 |
| prunus_persica | Prupe.1G219900_v2.0.a1 |
| pyrus_communis | pycom13g10950 pycom16g10740 |
| rosa_chinensis | RchiOBHm_Chr4g0429391 |
| rosa_laevigata | RLG00000007074 |
| rosa_multiflora | Rmu_sc0003708.1_g000021 |
| rosa_roxburghii | Rroxscaffold_5G00371030 |
| rosa_rugosa | Rorug04G0235700 |
| rosa_samantha | Rh4AG291400 Rh4BG297100 Rh4CG312700 Rh4DG294200 |
| rosa_wichuraiana | Rw4G025230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3056 |
| AatII | GACGTC | 1 cut(s) | 545 |
| AccB1I | GGYRCC | 1 cut(s) | 3677 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 192, 295, 3103 |
| AccI | GTMKAC | 2 cut(s) | 2319, 3847 |
| AccII | CGCG | 1 cut(s) | 2631 |
| AciI | CCGC | 4 cut(s) | 754, 1309, 1312, 3661 |
| AclI | AACGTT | 1 cut(s) | 2938 |
| AclWI | GGATC | 5 cut(s) | 62, 1756, 2265, 3201, 3214 |
| AcoI | YGGCCR | 2 cut(s) | 1568, 3193 |
| AcsI | RAATTY | 7 cut(s) | 699, 793, 2485, 2724, 3225, 3246, 3689 |
| AcuI | CTGAAG | 2 cut(s) | 2141, 2730 |
| AcyI | GRCGYC | 2 cut(s) | 542, 3446 |
| AdeI | CACNNNGTG | 1 cut(s) | 2092 |
| AfaI | GTAC | 6 cut(s) | 1128, 2172, 2204, 3266, 3819, 3907 |
| AflII | CTTAAG | 2 cut(s) | 323, 344 |
| AflIII | ACRYGT | 2 cut(s) | 3259, 3756 |
| AgeI | ACCGGT | 1 cut(s) | 3267 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 268, 300, 2485, 2517 |
| Alw21I | GWGCWC | 5 cut(s) | 110, 2611, 3187, 3609, 3706 |
| Alw26I | GTCTC | 6 cut(s) | 322, 354, 861, 1330, 1860, 3826 |
| Alw44I | GTGCAC | 1 cut(s) | 3702 |
| AlwI | GGATC | 5 cut(s) | 62, 1756, 2265, 3201, 3214 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2309 |
| Ama87I | CYCGRG | 2 cut(s) | 858, 2718 |
| ApaI | GGGCCC | 1 cut(s) | 1157 |
| ApaLI | GTGCAC | 1 cut(s) | 3702 |
| ApoI | RAATTY | 7 cut(s) | 699, 793, 2485, 2724, 3225, 3246, 3689 |
| AseI | ATTAAT | 1 cut(s) | 1050 |
| AsiGI | ACCGGT | 1 cut(s) | 3267 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2571, 2620 |
| AspLEI | GCGC | 1 cut(s) | 1509 |
| AsuHPI | GGTGA | 5 cut(s) | 1358, 2243, 3222, 3233, 3433 |
| AsuNHI | GCTAGC | 1 cut(s) | 139 |
| AvaI | CYCGRG | 2 cut(s) | 858, 2718 |
| AvaII | GGWCC | 3 cut(s) | 1141, 1984, 2510 |
| BaeGI | GKGCMC | 3 cut(s) | 186, 1157, 3706 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2186, 2219, 3248, 3281 |
| BalI | TGGCCA | 2 cut(s) | 1570, 3195 |
| BamHI | GGATCC | 1 cut(s) | 3206 |
| BanI | GGYRCC | 1 cut(s) | 3677 |
| BanII | GRGCYC | 2 cut(s) | 110, 1157 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2488, 2520 |
| BbsI | GAAGAC | 5 cut(s) | 419, 2529, 2623, 3052, 3280 |
| Bbv12I | GWGCWC | 5 cut(s) | 110, 2611, 3187, 3609, 3706 |
| BccI | CCATC | 8 cut(s) | 543, 992, 1280, 1493, 2418, 3036, 3320, 3704 |
| BceAI | ACGGC | 1 cut(s) | 3674 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 829, 863 |
| BclI | TGATCA | 2 cut(s) | 378, 3492 |
| BcoDI | GTCTC | 6 cut(s) | 322, 354, 861, 1330, 1860, 3826 |
| BfmI | CTRYAG | 5 cut(s) | 2640, 2847, 3086, 3405, 3876 |
| BfrI | CTTAAG | 2 cut(s) | 323, 344 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1400 |
| BlpI | GCTNAGC | 1 cut(s) | 1708 |
| Bme18I | GGWCC | 3 cut(s) | 1141, 1984, 2510 |
| BmeT110I | CYCGRG | 2 cut(s) | 858, 2718 |
| BmrI | ACTGGG | 2 cut(s) | 1151, 2757 |
| BmtI | GCTAGC | 1 cut(s) | 143 |
| BmuI | ACTGGG | 2 cut(s) | 1151, 2757 |
| BpiI | GAAGAC | 5 cut(s) | 419, 2529, 2623, 3052, 3280 |
| BpmI | CTGGAG | 6 cut(s) | 465, 795, 1312, 1650, 2149, 2847 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1802 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1708 |
| BpuEI | CTTGAG | 5 cut(s) | 94, 124, 1605, 2171, 3148 |
| BsaAI | YACGTR | 2 cut(s) | 3260, 3757 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1002, 1739, 3205 |
| BsaHI | GRCGYC | 2 cut(s) | 542, 3446 |
| BsaJI | CCNNGG | 6 cut(s) | 531, 586, 2964, 2990, 3196, 3673 |
| BsaWI | WCCGGW | 2 cut(s) | 1861, 3267 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 438, 468, 793, 823, 1648, 1678, 2845, 2875 |
| Bse118I | RCCGGY | 1 cut(s) | 3267 |
| Bse3DI | GCAATG | 5 cut(s) | 943, 999, 1530, 3175, 3417 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1002, 1739, 3205 |
| BseDI | CCNNGG | 6 cut(s) | 531, 586, 2964, 2990, 3196, 3673 |
| BseGI | GGATG | 6 cut(s) | 640, 1003, 2140, 2183, 3807, 3820 |
| BseJI | GATNNNNATC | 3 cut(s) | 1002, 1739, 3205 |
| BseMI | GCAATG | 5 cut(s) | 943, 999, 1530, 3175, 3417 |
| BseMII | CTCAG | 7 cut(s) | 144, 365, 2190, 2959, 3431, 3528, 3827 |
| BseRI | GAGGAG | 8 cut(s) | 622, 1244, 1247, 1359, 1362, 1848, 2136, 2616 |
| BseSI | GKGCMC | 3 cut(s) | 186, 1157, 3706 |
| BseYI | CCCAGC | 2 cut(s) | 168, 288 |
| BsgI | GTGCAG | 3 cut(s) | 714, 3772, 3936 |
| Bsh1236I | CGCG | 1 cut(s) | 2631 |
| BshNI | GGYRCC | 1 cut(s) | 3677 |
| BshTI | ACCGGT | 1 cut(s) | 3267 |
| BsiHKAI | GWGCWC | 5 cut(s) | 110, 2611, 3187, 3609, 3706 |
| BsiHKCI | CYCGRG | 2 cut(s) | 858, 2718 |
| BsiSI | CCGG | 3 cut(s) | 1862, 2768, 3268 |
| BslFI | GGGAC | 4 cut(s) | 1154, 1970, 2866, 2956 |
| BsmAI | GTCTC | 6 cut(s) | 322, 354, 861, 1330, 1860, 3826 |
| BsmFI | GGGAC | 4 cut(s) | 1154, 1970, 2866, 2956 |
| BsmI | GAATGC | 3 cut(s) | 2105, 3154, 3322 |
| BsoBI | CYCGRG | 2 cut(s) | 858, 2718 |
| Bsp120I | GGGCCC | 1 cut(s) | 1153 |
| Bsp1286I | GDGCHC | 7 cut(s) | 110, 186, 1157, 2611, 3187, 3609, 3706 |
| Bsp1407I | TGTACA | 2 cut(s) | 1126, 3817 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1708 |
| Bsp19I | CCATGG | 3 cut(s) | 586, 2990, 3196 |
| Bsp68I | TCGCGA | 1 cut(s) | 2631 |
| BspACI | CCGC | 4 cut(s) | 754, 1309, 1312, 3661 |
| BspCNI | CTCAG | 7 cut(s) | 143, 364, 2191, 2958, 3430, 3529, 3828 |
| BspFNI | CGCG | 1 cut(s) | 2631 |
| BspHI | TCATGA | 2 cut(s) | 381, 3291 |
| BspMAI | CTGCAG | 2 cut(s) | 2851, 3090 |
| BspOI | GCTAGC | 1 cut(s) | 143 |
| BspPI | GGATC | 5 cut(s) | 62, 1756, 2265, 3201, 3214 |
| BspQI | GCTCTTC | 2 cut(s) | 258, 1122 |
| BspT107I | GGYRCC | 1 cut(s) | 3677 |
| BspTI | CTTAAG | 2 cut(s) | 323, 344 |
| BsrDI | GCAATG | 5 cut(s) | 943, 999, 1530, 3175, 3417 |
| BsrFI | RCCGGY | 1 cut(s) | 3267 |
| BsrGI | TGTACA | 2 cut(s) | 1126, 3817 |
| BssAI | RCCGGY | 1 cut(s) | 3267 |
| BssECI | CCNNGG | 6 cut(s) | 531, 586, 2964, 2990, 3196, 3673 |
| BssNI | GRCGYC | 2 cut(s) | 542, 3446 |
| BssT1I | CCWWGG | 5 cut(s) | 586, 2964, 2990, 3196, 3673 |
| Bst4CI | ACNGT | 4 cut(s) | 90, 762, 2179, 3079 |
| Bst6I | CTCTTC | 5 cut(s) | 258, 599, 1122, 3294, 3824 |
| BstACI | GRCGYC | 2 cut(s) | 542, 3446 |
| BstAFI | CTTAAG | 2 cut(s) | 323, 344 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3599 |
| BstAUI | TGTACA | 2 cut(s) | 1126, 3817 |
| BstBAI | YACGTR | 2 cut(s) | 3260, 3757 |
| BstDSI | CCRYGG | 3 cut(s) | 586, 2990, 3196 |
| BstF5I | GGATG | 6 cut(s) | 640, 1003, 2140, 2183, 3807, 3820 |
| BstFNI | CGCG | 1 cut(s) | 2631 |
| BstHHI | GCGC | 1 cut(s) | 1509 |
| BstMAI | GTCTC | 6 cut(s) | 322, 354, 861, 1330, 1860, 3826 |
| BstNSI | RCATGY | 6 cut(s) | 1189, 1507, 2001, 2367, 2679, 3345 |
| BstSFI | CTRYAG | 5 cut(s) | 2640, 2847, 3086, 3405, 3876 |
| BstSLI | GKGCMC | 3 cut(s) | 186, 1157, 3706 |
| BstUI | CGCG | 1 cut(s) | 2631 |
| BstV2I | GAAGAC | 5 cut(s) | 419, 2529, 2623, 3052, 3280 |
| BstX2I | RGATCY | 1 cut(s) | 3206 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 151, 3218 |
| BstYI | RGATCY | 1 cut(s) | 3206 |
| BtgI | CCRYGG | 3 cut(s) | 586, 2990, 3196 |
| BtgZI | GCGATG | 2 cut(s) | 1430, 3055 |
| BtsCI | GGATG | 6 cut(s) | 640, 1003, 2140, 2183, 3807, 3820 |
| BtsI | GCAGTG | 2 cut(s) | 1796, 3609 |
| BtsIMutI | CAGTG | 8 cut(s) | 138, 300, 438, 1164, 1796, 3108, 3529, 3609 |
| BtuMI | TCGCGA | 1 cut(s) | 2631 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2309 |
| CciI | TCATGA | 2 cut(s) | 381, 3291 |
| CfoI | GCGC | 1 cut(s) | 1509 |
| Cfr10I | RCCGGY | 1 cut(s) | 3267 |
| CseI | GACGC | 1 cut(s) | 3435 |
| CsiI | ACCWGGT | 1 cut(s) | 2229 |
| Csp6I | GTAC | 6 cut(s) | 1127, 2171, 2203, 3265, 3818, 3906 |
| CspAI | ACCGGT | 1 cut(s) | 3267 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1191, 1226 |
| CviQI | GTAC | 6 cut(s) | 1127, 2171, 2203, 3265, 3818, 3906 |
| DraIII | CACNNNGTG | 1 cut(s) | 2092 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3056 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3056 |
| EaeI | YGGCCR | 2 cut(s) | 1568, 3193 |
| Eam1104I | CTCTTC | 5 cut(s) | 258, 599, 1122, 3294, 3824 |
| EarI | CTCTTC | 5 cut(s) | 258, 599, 1122, 3294, 3824 |
| Ecl136II | GAGCTC | 1 cut(s) | 108 |
| Eco130I | CCWWGG | 5 cut(s) | 586, 2964, 2990, 3196, 3673 |
| Eco147I | AGGCCT | 1 cut(s) | 1526 |
| Eco24I | GRGCYC | 2 cut(s) | 110, 1157 |
| Eco32I | GATATC | 4 cut(s) | 1767, 2560, 2833, 3720 |
| Eco47I | GGWCC | 3 cut(s) | 1141, 1984, 2510 |
| Eco53kI | GAGCTC | 1 cut(s) | 108 |
| Eco57I | CTGAAG | 2 cut(s) | 2141, 2730 |
| Eco88I | CYCGRG | 2 cut(s) | 858, 2718 |
| EcoICRI | GAGCTC | 1 cut(s) | 108 |
| EcoO109I | RGGNCCY | 4 cut(s) | 211, 1141, 1153, 1791 |
| EcoRI | GAATTC | 3 cut(s) | 699, 2485, 3246 |
| EcoRV | GATATC | 4 cut(s) | 1767, 2560, 2833, 3720 |
| EcoT14I | CCWWGG | 5 cut(s) | 586, 2964, 2990, 3196, 3673 |
| EcoT22I | ATGCAT | 4 cut(s) | 499, 1187, 2107, 3324 |
| EcoT38I | GRGCYC | 2 cut(s) | 110, 1157 |
| ErhI | CCWWGG | 5 cut(s) | 586, 2964, 2990, 3196, 3673 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2209, 2241 |
| FaqI | GGGAC | 4 cut(s) | 1154, 1970, 2866, 2956 |
| FbaI | TGATCA | 2 cut(s) | 378, 3492 |
| FblI | GTMKAC | 2 cut(s) | 2319, 3847 |
| FokI | GGATG | 6 cut(s) | 647, 1010, 2127, 2170, 3814, 3827 |
| FriOI | GRGCYC | 2 cut(s) | 110, 1157 |
| GlaI | GCGC | 1 cut(s) | 1508 |
| GsaI | CCCAGC | 2 cut(s) | 172, 292 |
| GsuI | CTGGAG | 6 cut(s) | 465, 795, 1312, 1650, 2149, 2847 |
| HapII | CCGG | 3 cut(s) | 1862, 2768, 3268 |
| HgaI | GACGC | 1 cut(s) | 3435 |
| HhaI | GCGC | 1 cut(s) | 1509 |
| Hin1I | GRCGYC | 2 cut(s) | 542, 3446 |
| Hin6I | GCGC | 1 cut(s) | 1507 |
| HinP1I | GCGC | 1 cut(s) | 1507 |
| HincII | GTYRAC | 5 cut(s) | 39, 831, 1638, 1951, 3462 |
| HindII | GTYRAC | 5 cut(s) | 39, 831, 1638, 1951, 3462 |
| HindIII | AAGCTT | 1 cut(s) | 1705 |
| HpaI | GTTAAC | 2 cut(s) | 39, 3462 |
| HpaII | CCGG | 3 cut(s) | 1862, 2768, 3268 |
| HphI | GGTGA | 5 cut(s) | 1358, 2243, 3222, 3233, 3433 |
| HpyAV | CCTTC | 7 cut(s) | 506, 686, 1067, 1468, 2126, 3519, 3551 |
| HpyCH4III | ACNGT | 4 cut(s) | 90, 762, 2179, 3079 |
| HpyCH4IV | ACGT | 7 cut(s) | 542, 1588, 1923, 2938, 3259, 3743, 3756 |
| HpySE526I | ACGT | 7 cut(s) | 542, 1588, 1923, 2938, 3259, 3743, 3756 |
| Hsp92I | GRCGYC | 2 cut(s) | 542, 3446 |
| HspAI | GCGC | 1 cut(s) | 1507 |
| KflI | GGGWCCC | 1 cut(s) | 1141 |
| Ksp22I | TGATCA | 2 cut(s) | 378, 3492 |
| KspAI | GTTAAC | 2 cut(s) | 39, 3462 |
| LguI | GCTCTTC | 2 cut(s) | 258, 1122 |
| LmnI | GCTCC | 5 cut(s) | 136, 1822, 1915, 3182, 3614 |
| MabI | ACCWGGT | 1 cut(s) | 2229 |
| MaeII | ACGT | 7 cut(s) | 542, 1588, 1923, 2938, 3259, 3743, 3756 |
| MfeI | CAATTG | 3 cut(s) | 474, 485, 3006 |
| MflI | RGATCY | 1 cut(s) | 3206 |
| MhlI | GDGCHC | 7 cut(s) | 110, 186, 1157, 2611, 3187, 3609, 3706 |
| MlsI | TGGCCA | 2 cut(s) | 1570, 3195 |
| MluNI | TGGCCA | 2 cut(s) | 1570, 3195 |
| MlyI | GAGTC | 6 cut(s) | 1360, 2050, 2315, 2978, 3019, 3409 |
| MmeI | TCCRAC | 5 cut(s) | 123, 1790, 1915, 3182, 3867 |
| Mox20I | TGGCCA | 2 cut(s) | 1570, 3195 |
| Mph1103I | ATGCAT | 4 cut(s) | 499, 1187, 2107, 3324 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2571, 2620 |
| MscI | TGGCCA | 2 cut(s) | 1570, 3195 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1469, 3019, 3216, 3317, 3683 |
| Msp20I | TGGCCA | 2 cut(s) | 1570, 3195 |
| MspA1I | CMGCKG | 4 cut(s) | 754, 1281, 2981, 3920 |
| MspCI | CTTAAG | 2 cut(s) | 323, 344 |
| MspI | CCGG | 3 cut(s) | 1862, 2768, 3268 |
| MunI | CAATTG | 3 cut(s) | 474, 485, 3006 |
| Mva1269I | GAATGC | 3 cut(s) | 2105, 3154, 3322 |
| MvnI | CGCG | 1 cut(s) | 2631 |
| NcoI | CCATGG | 3 cut(s) | 586, 2990, 3196 |
| NheI | GCTAGC | 1 cut(s) | 139 |
| NmuCI | GTSAC | 2 cut(s) | 842, 3047 |
| NruI | TCGCGA | 1 cut(s) | 2631 |
| NsiI | ATGCAT | 4 cut(s) | 499, 1187, 2107, 3324 |
| NspI | RCATGY | 6 cut(s) | 1189, 1507, 2001, 2367, 2679, 3345 |
| PaeI | GCATGC | 1 cut(s) | 1189 |
| PaeR7I | CTCGAG | 2 cut(s) | 858, 2718 |
| PagI | TCATGA | 2 cut(s) | 381, 3291 |
| PceI | AGGCCT | 1 cut(s) | 1526 |
| PciSI | GCTCTTC | 2 cut(s) | 258, 1122 |
| PctI | GAATGC | 3 cut(s) | 2105, 3154, 3322 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2571, 2620 |
| PfeI | GAWTC | 7 cut(s) | 395, 1423, 1740, 2776, 3201, 3635, 3734 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 192, 295, 3103 |
| PfoI | TCCNGGA | 2 cut(s) | 1300, 2051 |
| PinAI | ACCGGT | 1 cut(s) | 3267 |
| PleI | GAGTC | 6 cut(s) | 1360, 2050, 2315, 2977, 3019, 3409 |
| PpsI | GAGTC | 6 cut(s) | 1360, 2050, 2315, 2977, 3019, 3409 |
| Ppu21I | YACGTR | 2 cut(s) | 3260, 3757 |
| PpuMI | RGGWCCY | 1 cut(s) | 1141 |
| PshBI | ATTAAT | 1 cut(s) | 1050 |
| Psp124BI | GAGCTC | 1 cut(s) | 110 |
| Psp1406I | AACGTT | 1 cut(s) | 2938 |
| Psp5II | RGGWCCY | 1 cut(s) | 1141 |
| PspFI | CCCAGC | 2 cut(s) | 168, 288 |
| PspOMI | GGGCCC | 1 cut(s) | 1153 |
| PspPPI | RGGWCCY | 1 cut(s) | 1141 |
| PspXI | VCTCGAGB | 1 cut(s) | 2718 |
| PstI | CTGCAG | 2 cut(s) | 2851, 3090 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2309 |
| PsuI | RGATCY | 1 cut(s) | 3206 |
| PvuII | CAGCTG | 3 cut(s) | 1281, 2981, 3920 |
| RruI | TCGCGA | 1 cut(s) | 2631 |
| RsaI | GTAC | 6 cut(s) | 1128, 2172, 2204, 3266, 3819, 3907 |
| RsaNI | GTAC | 6 cut(s) | 1127, 2171, 2203, 3265, 3818, 3906 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1469, 3019, 3216, 3317, 3683 |
| SacI | GAGCTC | 1 cut(s) | 110 |
| SapI | GCTCTTC | 2 cut(s) | 258, 1122 |
| SchI | GAGTC | 6 cut(s) | 1360, 2050, 2315, 2978, 3019, 3409 |
| SduI | GDGCHC | 7 cut(s) | 110, 186, 1157, 2611, 3187, 3609, 3706 |
| SexAI | ACCWGGT | 1 cut(s) | 2229 |
| SfcI | CTRYAG | 5 cut(s) | 2640, 2847, 3086, 3405, 3876 |
| Sfr274I | CTCGAG | 2 cut(s) | 858, 2718 |
| SinI | GGWCC | 3 cut(s) | 1141, 1984, 2510 |
| SlaI | CTCGAG | 2 cut(s) | 858, 2718 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1469, 3019, 3216, 3317, 3683 |
| SmlI | CTYRAG | 9 cut(s) | 103, 109, 323, 344, 858, 1620, 2150, 2718, 3163 |
| SmoI | CTYRAG | 9 cut(s) | 103, 109, 323, 344, 858, 1620, 2150, 2718, 3163 |
| SphI | GCATGC | 1 cut(s) | 1189 |
| SseBI | AGGCCT | 1 cut(s) | 1526 |
| SsiI | CCGC | 4 cut(s) | 754, 1309, 1312, 3661 |
| SspI | AATATT | 4 cut(s) | 226, 420, 643, 1036 |
| SstI | GAGCTC | 1 cut(s) | 110 |
| StuI | AGGCCT | 1 cut(s) | 1526 |
| StyI | CCWWGG | 5 cut(s) | 586, 2964, 2990, 3196, 3673 |
| TaaI | ACNGT | 4 cut(s) | 90, 762, 2179, 3079 |
| TaiI | ACGT | 7 cut(s) | 545, 1591, 1926, 2941, 3262, 3746, 3759 |
| TaqI | TCGA | 8 cut(s) | 280, 459, 859, 1719, 2260, 2719, 2922, 3073 |
| TaqII | GACCGA | 1 cut(s) | 3311 |
| TatI | WGTACW | 2 cut(s) | 1126, 3817 |
| TauI | GCSGC | 2 cut(s) | 1314, 3664 |
| TfiI | GAWTC | 7 cut(s) | 395, 1423, 1740, 2776, 3201, 3635, 3734 |
| TscAI | CASTG | 8 cut(s) | 138, 300, 438, 1164, 1803, 3108, 3536, 3609 |
| TseFI | GTSAC | 2 cut(s) | 842, 3047 |
| Tsp45I | GTSAC | 2 cut(s) | 842, 3047 |
| TspGWI | ACGGA | 1 cut(s) | 3865 |
| TspRI | CASTG | 8 cut(s) | 138, 300, 438, 1164, 1803, 3108, 3536, 3609 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 192, 295, 3103 |
| Vha464I | CTTAAG | 2 cut(s) | 323, 344 |
| VneI | GTGCAC | 1 cut(s) | 3702 |
| VpaK11BI | GGWCC | 3 cut(s) | 1141, 1984, 2510 |
| VspI | ATTAAT | 1 cut(s) | 1050 |
| XapI | RAATTY | 7 cut(s) | 699, 793, 2485, 2724, 3225, 3246, 3689 |
| XceI | RCATGY | 6 cut(s) | 1189, 1507, 2001, 2367, 2679, 3345 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1604 |
| XhoI | CTCGAG | 2 cut(s) | 858, 2718 |
| XmiI | GTMKAC | 2 cut(s) | 2319, 3847 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2571, 2620 |
| ZraI | GACGTC | 1 cut(s) | 543 |
| Zsp2I | ATGCAT | 4 cut(s) | 499, 1187, 2107, 3324 |