Rorug05G0228300

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0019437
Physical Location & Seq
Forward (+)
23704842 .. 23706946
2105 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0228300.1

Sequence Viewer

Length: 2031 bp
ATGGCTGTCAACAACACATTGCGGTTGTCCCTAAAGCAGTTTCAATTGCTTATTCTTCTCTTATTACTGTTGCCCTTCTCTGCAACTCCATTGACCTTCAATTTCCCCAGCTTCCCCCCTGCTGTTACCAATATATCTGTGGAGGGAGATGCTTTCCCCGCTGGCTTCCTCCGACTTACCAAGAGTACCTTCGACGTTCAATGGGACCAAAGCGTCGGCCGAGCTACCTACTGCCAACCTTTCCTACTCCGCCAAAACTCCACTAGAAAACTCGCTGATTTTACCTCAAGTTTCACATTCGTCATTGACTCCGGCGGCTCCACCATGTACGGTGATGGGCTGGCCTTCTTCCTAGCGCCGGCCGGGTCCTTACTAAACAACAAATTAGGAGTAGGTAGCCGTCTTGGCCTCCCTTTCAACATTACCCTTGCAAGCTATTCCATGACGAGTACTGAATACCCATTTGTGGCGGTCGAGTTTGATATCTTCCCTTCTCAGAAAGAATCGAGGGATGGGCCTATAAACTACACTCATGCGGGCATCGACATCAACTCCCTCACGTCTTATGTTACCGAGCCATGGGATGGTGGTATCAGGGAAGGAAAACAAAATAATGCCACAATTAGTTACAACTCCACCTCGAAAAATCTCAGTGTTGCCTTCACTACGATTCAAAATGGTCATAGTTGGGTTCCTGCTTCAACTGGTGCCTTAATTGCTCAGCATAAGATCGTCTCATGGAATTTTACTTCAACTCCTCTGGTTGATGATAATGCACCATCGACCACAAGGTCCAACAACGATAGAGTCAGACTAGCGGTTGGATTGGGTGTTGGTGGATGTCTTACCTTGGTTGGTGTGCTGGCTTTCGTTTGGTTCATCTTCTCCAGGAGGAGGAGGGAGAAAGATGGGGAAAGTAGTGATGATGATACCAGGGTACTTAATGATTTGATTCCTGAAGAATTCGAAAAGGGGACAGGCCCTAGGAAGTTTTCGTACAATGAATTGGCCCTTGCAACTAATAATTTTGTACAGGAAGAAAAGCTTGGGGAGGGAGGGTTTGGTGGAGTTTACAAAGGGTTCATCAAAGATATGAACTCGTATGTAGCTGTTAAGAAGATATCAAGGGGGTCTAAACAAGGGCTGAAGGAGTATGCAGCAGAAGTGAGTATCATTAGTCGGCTGAGGCATCGGAATCTGGTGCAACTCGTAGGTTGGTGCCACGAAAAGAAACTCCTACTTGTCTACGAATTCATGCCCAACCGTAGCTTGGATTCTCACTTGTTCAAAGAAAAGAGCCTGTTAACTTGGGAGGTAAGATACAAAATTGCACATGGATTGGCCTCGGGATTGCTCTATCTACACCAAGGATGGGAACAATGTGTGCTGCACAGAGATATCAAATCCAGCAATGTTATGTTGGATTCCAATTTTAACACAAAACTTGGAGATTTTGGGTTAGCCAAACTTGTAGACCATGGAAAGCTCTCGCAAACAACAATTGTGGCTGGAACCATGGGCTACATGGCTATGGAATATGTTACAACGGGAAAGGCTAGCAAGGAATCAGATGTCTTTAGTTTTGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAAACCCGTTGATTCGAGGTATGAAGAAAAGCAAATCAATTTGGTGGAGTGGGTTTGGGAGCTCTATGGAGAAGGGAAAATTATCGAAGCAGCAGACCCAAAATTGTGCGGGGATTTTGATAAGAAGCAAATGGAGTGCTTAATGATGGTTGGGCTATGGTGTGCTCATCCAGATCACAACTCTAGGCCATTGATACAACAAGCAATCCAAGTGCTTGACTTCGAAGTTCCATTGCCCAATCTCCCATTGGCGATGCCAATGGCCTTTGCACTTCCATTATCACTCTCGTTGTCGTATAGTGGTGACACTACTGGAGGTCAAAGTAAGTCTTCAGGATATGGTTCTACCATCAACTCCTCACAGCTAACCTCATCTTCTACCCCAAATTCTAATCCATTAGCAACTATTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

676

Amino Acids

74.53

Weight (kDa)

6.66

Isoelectric Point (pI)

35.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 226 7.5e-40 Legume lectin domain
Pkinase PF00069 344 - 609 2.7e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 345 - 554 2.9e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019437)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0226281
rosa_rugosa Rorug05G0228300
rosa_samantha Rh7AG383000 Rh7AG383100 Rh7CG402500 Rh7CG402600 Rh7DG381300 Rh7DG381400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 212, 790
AccB1I GGYRCC 2 cut(s) 707, 1218
AccB7I CCANNNNNTGG 1 cut(s) 584
AccI GTMKAC 2 cut(s) 1245, 1473
AciI CCGC 8 cut(s) 22, 159, 250, 315, 470, 536, 818, 1725
AcoI YGGCCR 2 cut(s) 217, 360
AcsI RAATTY 4 cut(s) 742, 962, 1250, 2002
AcuI CTGAAG 3 cut(s) 978, 1166, 1932
AfaI GTAC 6 cut(s) 187, 329, 451, 939, 998, 1032
AfiI CCNNNNNNNGG 7 cut(s) 358, 466, 579, 584, 894, 1270, 1372
AgsI TTSAA 8 cut(s) 44, 100, 200, 418, 674, 702, 753, 1288
AjiI CACGTC 1 cut(s) 561
AjnI CCWGG 2 cut(s) 887, 932
AjuI GAANNNNNNNTTGG 4 cut(s) 173, 205, 1029, 1061
Alw21I GWGCWC 2 cut(s) 1680, 1783
Alw26I GTCTC 1 cut(s) 739
Ama87I CYCGRG 1 cut(s) 1345
ApeKI GCWGC 3 cut(s) 1157, 1387, 1706
ApoI RAATTY 4 cut(s) 742, 962, 1250, 2002
AspA2I CCTAGG 1 cut(s) 983
AspLEI GCGC 1 cut(s) 358
AspS9I GGNCC 6 cut(s) 205, 366, 515, 792, 980, 1009
AsuC2I CCSGG 1 cut(s) 364
AsuHPI GGTGA 2 cut(s) 344, 1931
AsuII TTCGAA 2 cut(s) 966, 1839
AsuNHI GCTAGC 1 cut(s) 1556
AvaI CYCGRG 1 cut(s) 1345
AvaII GGWCC 3 cut(s) 205, 366, 792
AvrII CCTAGG 1 cut(s) 983
BaeI ACNNNNGTAYC 2 cut(s) 921, 954
BanI GGYRCC 2 cut(s) 707, 1218
BanII GRGCYC 1 cut(s) 1680
BarI GAAGNNNNNNTAC 2 cut(s) 980, 1012
BbsI GAAGAC 1 cut(s) 1938
Bbv12I GWGCWC 2 cut(s) 1680, 1783
BbvCI CCTCAGC 1 cut(s) 1184
BbvI GCAGC 3 cut(s) 1169, 1374, 1718
BccI CCATC 8 cut(s) 329, 506, 578, 787, 902, 1365, 1756, 1973
BceAI ACGGC 1 cut(s) 384
BciT130I CCWGG 2 cut(s) 889, 934
BcnI CCSGG 1 cut(s) 364
BcoDI GTCTC 1 cut(s) 739
BfaI CTAG 6 cut(s) 264, 353, 815, 984, 1557, 1800
BfoI RGCGCY 1 cut(s) 359
BglI GCCNNNNNGGC 1 cut(s) 405
BisI GCNGC 4 cut(s) 316, 1158, 1388, 1707
BlnI CCTAGG 1 cut(s) 983
BlpI GCTNAGC 1 cut(s) 720
BlsI GCNGC 4 cut(s) 317, 1159, 1389, 1708
BmcAI AGTACT 1 cut(s) 451
Bme1390I CCNGG 3 cut(s) 364, 889, 934
Bme18I GGWCC 3 cut(s) 205, 366, 792
BmeT110I CYCGRG 1 cut(s) 1345
BmgBI CACGTC 1 cut(s) 561
BmgT120I GGNCC 6 cut(s) 205, 366, 515, 792, 980, 1009
BmiI GGNNCC 7 cut(s) 206, 319, 367, 693, 709, 1220, 1513
BmrFI CCNGG 3 cut(s) 364, 889, 934
BmsI GCATC 4 cut(s) 139, 549, 1198, 1860
BmtI GCTAGC 1 cut(s) 1560
BpiI GAAGAC 1 cut(s) 1938
BpmI CTGGAG 2 cut(s) 871, 1950
Bpu10I CCTNAGC 1 cut(s) 1184
Bpu1102I GCTNAGC 1 cut(s) 720
Bpu14I TTCGAA 2 cut(s) 966, 1839
BpuEI CTTGAG 1 cut(s) 271
BpuMI CCSGG 1 cut(s) 364
BsaJI CCNNGG 8 cut(s) 578, 849, 933, 983, 1344, 1366, 1477, 1515
BsaXI ACNNNNNCTCC 6 cut(s) 536, 566, 739, 769, 1043, 1073
Bsc4I CCNNNNNNNGG 7 cut(s) 358, 466, 579, 584, 894, 1270, 1372
Bse118I RCCGGY 1 cut(s) 358
Bse1I ACTGG 2 cut(s) 709, 1933
Bse3DI GCAATG 3 cut(s) 17, 1417, 1847
BseBI CCWGG 2 cut(s) 889, 934
BseDI CCNNGG 8 cut(s) 578, 849, 933, 983, 1344, 1366, 1477, 1515
BseGI GGATG 5 cut(s) 517, 589, 845, 1376, 1783
BseLI CCNNNNNNNGG 7 cut(s) 358, 466, 579, 584, 894, 1270, 1372
BseMI GCAATG 3 cut(s) 17, 1417, 1847
BseMII CTCAG 4 cut(s) 509, 664, 734, 1175
BseNI ACTGG 2 cut(s) 709, 1933
BseRI GAGGAG 4 cut(s) 747, 907, 910, 1963
BseX3I CGGCCG 2 cut(s) 217, 360
BseXI GCAGC 3 cut(s) 1169, 1374, 1718
BseYI CCCAGC 1 cut(s) 107
BsgI GTGCAG 1 cut(s) 1373
Bsh1285I CGRYCG 3 cut(s) 220, 363, 474
BshNI GGYRCC 2 cut(s) 707, 1218
BsiEI CGRYCG 3 cut(s) 220, 363, 474
BsiHKAI GWGCWC 2 cut(s) 1680, 1783
BsiHKCI CYCGRG 1 cut(s) 1345
BsiSI CCGG 3 cut(s) 312, 359, 363
BslFI GGGAC 3 cut(s) 13, 218, 988
BslI CCNNNNNNNGG 7 cut(s) 358, 466, 579, 584, 894, 1270, 1372
BsmAI GTCTC 1 cut(s) 739
BsmBI CGTCTC 1 cut(s) 739
BsmFI GGGAC 3 cut(s) 13, 218, 988
BsoBI CYCGRG 1 cut(s) 1345
Bsp119I TTCGAA 2 cut(s) 966, 1839
Bsp1286I GDGCHC 2 cut(s) 1680, 1783
Bsp1407I TGTACA 1 cut(s) 1030
Bsp143I GATC 2 cut(s) 729, 1789
Bsp1720I GCTNAGC 1 cut(s) 720
Bsp19I CCATGG 3 cut(s) 578, 1477, 1515
BspACI CCGC 8 cut(s) 22, 159, 250, 315, 470, 536, 818, 1725
BspCNI CTCAG 4 cut(s) 508, 663, 733, 1176
BspLI GGNNCC 7 cut(s) 206, 319, 367, 693, 709, 1220, 1513
BspOI GCTAGC 1 cut(s) 1560
BspT104I TTCGAA 2 cut(s) 966, 1839
BspT107I GGYRCC 2 cut(s) 707, 1218
BsrDI GCAATG 3 cut(s) 17, 1417, 1847
BsrFI RCCGGY 1 cut(s) 358
BsrGI TGTACA 1 cut(s) 1030
BsrI ACTGG 2 cut(s) 709, 1933
BssAI RCCGGY 1 cut(s) 358
BssECI CCNNGG 8 cut(s) 578, 849, 933, 983, 1344, 1366, 1477, 1515
BssMI GATC 2 cut(s) 729, 1789
BssT1I CCWWGG 6 cut(s) 578, 849, 983, 1366, 1477, 1515
Bst2UI CCWGG 2 cut(s) 889, 934
Bst4CI ACNGT 3 cut(s) 69, 332, 1265
BstAUI TGTACA 1 cut(s) 1030
BstBI TTCGAA 2 cut(s) 966, 1839
BstC8I GCNNGC 7 cut(s) 163, 342, 360, 433, 538, 864, 1558
BstDEI CTNAG 4 cut(s) 495, 650, 720, 1184
BstDSI CCRYGG 3 cut(s) 578, 1477, 1515
BstF5I GGATG 5 cut(s) 517, 589, 845, 1376, 1783
BstH2I RGCGCY 1 cut(s) 359
BstHHI GCGC 1 cut(s) 358
BstKTI GATC 2 cut(s) 732, 1792
BstMAI GTCTC 1 cut(s) 739
BstMBI GATC 2 cut(s) 729, 1789
BstMCI CGRYCG 3 cut(s) 220, 363, 474
BstMWI GCNNNNNNNGC 3 cut(s) 158, 405, 716
BstNI CCWGG 2 cut(s) 889, 934
BstSCI CCNGG 3 cut(s) 362, 887, 932
BstV1I GCAGC 3 cut(s) 1169, 1374, 1718
BstV2I GAAGAC 1 cut(s) 1938
BstZI CGGCCG 2 cut(s) 217, 360
BtgI CCRYGG 3 cut(s) 578, 1477, 1515
BtgZI GCGATG 1 cut(s) 1883
BtrI CACGTC 1 cut(s) 561
BtsCI GGATG 5 cut(s) 517, 589, 845, 1376, 1783
BtsIMutI CAGTG 1 cut(s) 658
Cac8I GCNNGC 7 cut(s) 163, 342, 360, 433, 538, 864, 1558
CfoI GCGC 1 cut(s) 358
Cfr10I RCCGGY 1 cut(s) 358
Cfr13I GGNCC 6 cut(s) 205, 366, 515, 792, 980, 1009
CseI GACGC 1 cut(s) 202
Csp6I GTAC 6 cut(s) 186, 328, 450, 938, 997, 1031
CspCI CAANNNNNGTGG 2 cut(s) 1485, 1520
CviQI GTAC 6 cut(s) 186, 328, 450, 938, 997, 1031
DdeI CTNAG 4 cut(s) 495, 650, 720, 1184
DpnI GATC 2 cut(s) 731, 1791
DpnII GATC 2 cut(s) 729, 1789
DrdI GACNNNNNNGTC 2 cut(s) 212, 790
DseDI GACNNNNNNGTC 2 cut(s) 212, 790
EaeI YGGCCR 2 cut(s) 217, 360
EagI CGGCCG 2 cut(s) 217, 360
EciI GGCGGA 1 cut(s) 239
Ecl136II GAGCTC 1 cut(s) 1678
EclXI CGGCCG 2 cut(s) 217, 360
Eco130I CCWWGG 6 cut(s) 578, 849, 983, 1366, 1477, 1515
Eco24I GRGCYC 1 cut(s) 1680
Eco32I GATATC 3 cut(s) 484, 1122, 1399
Eco47I GGWCC 3 cut(s) 205, 366, 792
Eco52I CGGCCG 2 cut(s) 217, 360
Eco53kI GAGCTC 1 cut(s) 1678
Eco57I CTGAAG 3 cut(s) 978, 1166, 1932
Eco88I CYCGRG 1 cut(s) 1345
EcoICRI GAGCTC 1 cut(s) 1678
EcoO109I RGGNCCY 2 cut(s) 366, 980
EcoRI GAATTC 2 cut(s) 962, 1250
EcoRII CCWGG 2 cut(s) 887, 932
EcoRV GATATC 3 cut(s) 484, 1122, 1399
EcoT14I CCWWGG 6 cut(s) 578, 849, 983, 1366, 1477, 1515
EcoT38I GRGCYC 1 cut(s) 1680
ErhI CCWWGG 6 cut(s) 578, 849, 983, 1366, 1477, 1515
Esp3I CGTCTC 1 cut(s) 739
FalI AAGNNNNNCTT 6 cut(s) 173, 205, 1029, 1061, 1930, 1962
FaqI GGGAC 3 cut(s) 13, 218, 988
FauI CCCGC 3 cut(s) 166, 529, 1718
FblI GTMKAC 2 cut(s) 1245, 1473
Fnu4HI GCNGC 4 cut(s) 316, 1158, 1388, 1707
FokI GGATG 5 cut(s) 524, 596, 852, 1383, 1770
FriOI GRGCYC 1 cut(s) 1680
Fsp4HI GCNGC 4 cut(s) 316, 1158, 1388, 1707
FspBI CTAG 6 cut(s) 264, 353, 815, 984, 1557, 1800
GlaI GCGC 1 cut(s) 357
GluI GCNGC 4 cut(s) 316, 1158, 1388, 1707
GsaI CCCAGC 1 cut(s) 111
GsuI CTGGAG 2 cut(s) 871, 1950
HaeII RGCGCY 1 cut(s) 359
HapII CCGG 3 cut(s) 312, 359, 363
HgaI GACGC 1 cut(s) 202
HhaI GCGC 1 cut(s) 358
Hin6I GCGC 1 cut(s) 356
HinP1I GCGC 1 cut(s) 356
HincII GTYRAC 2 cut(s) 10, 1305
HindII GTYRAC 2 cut(s) 10, 1305
HindIII AAGCTT 1 cut(s) 1043
HpaI GTTAAC 1 cut(s) 1305
HpaII CCGG 3 cut(s) 312, 359, 363
HphI GGTGA 2 cut(s) 344, 1931
Hpy166II GTNNAC 5 cut(s) 10, 1072, 1246, 1305, 1474
Hpy188I TCNGA 5 cut(s) 173, 498, 812, 1194, 1570
Hpy188III TCNNGA 4 cut(s) 956, 1347, 1787, 1950
Hpy8I GTNNAC 5 cut(s) 10, 1072, 1246, 1305, 1474
Hpy99I CGWCG 2 cut(s) 197, 218
HpyAV CCTTC 9 cut(s) 85, 106, 199, 355, 501, 593, 670, 1141, 1682
HpyCH4III ACNGT 3 cut(s) 69, 332, 1265
HpyCH4IV ACGT 2 cut(s) 195, 560
HpyCH4V TGCA 9 cut(s) 83, 431, 776, 1016, 1157, 1204, 1331, 1390, 1886
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 405, 716
HpyF3I CTNAG 4 cut(s) 495, 650, 720, 1184
HpySE526I ACGT 2 cut(s) 195, 560
HspAI GCGC 1 cut(s) 356
KroI GCCGGC 1 cut(s) 358
KroNI GCCGGC 1 cut(s) 360
KspAI GTTAAC 1 cut(s) 1305
Kzo9I GATC 2 cut(s) 729, 1789
LmnI GCTCC 2 cut(s) 323, 1675
Lsp1109I GCAGC 3 cut(s) 1169, 1374, 1718
LweI GCATC 4 cut(s) 139, 549, 1198, 1860
MaeI CTAG 6 cut(s) 264, 353, 815, 984, 1557, 1800
MaeII ACGT 2 cut(s) 195, 560
MaeIII GTNAC 5 cut(s) 124, 568, 626, 1540, 1919
MalI GATC 2 cut(s) 731, 1791
MboI GATC 2 cut(s) 729, 1789
MfeI CAATTG 2 cut(s) 44, 1500
MhlI GDGCHC 2 cut(s) 1680, 1783
MlyI GAGTC 2 cut(s) 302, 816
MmeI TCCRAC 4 cut(s) 196, 802, 819, 1401
MroNI GCCGGC 1 cut(s) 358
MseI TTAA 6 cut(s) 713, 942, 1113, 1304, 1434, 1757
MslI CAYNNNNRTG 1 cut(s) 1529
MspA1I CMGCKG 1 cut(s) 161
MspI CCGG 3 cut(s) 312, 359, 363
MspR9I CCNGG 3 cut(s) 364, 889, 934
MunI CAATTG 2 cut(s) 44, 1500
MvaI CCWGG 2 cut(s) 889, 934
MwoI GCNNNNNNNGC 3 cut(s) 158, 405, 716
NaeI GCCGGC 1 cut(s) 360
NciI CCSGG 1 cut(s) 364
NcoI CCATGG 3 cut(s) 578, 1477, 1515
NdeII GATC 2 cut(s) 729, 1789
NgoMIV GCCGGC 1 cut(s) 358
NheI GCTAGC 1 cut(s) 1556
NlaIV GGNNCC 7 cut(s) 206, 319, 367, 693, 709, 1220, 1513
NmeAIII GCCGAG 1 cut(s) 245
NmuCI GTSAC 1 cut(s) 1919
NspV TTCGAA 2 cut(s) 966, 1839
PdiI GCCGGC 1 cut(s) 360
PfeI GAWTC 8 cut(s) 503, 670, 952, 1195, 1274, 1424, 1565, 1628
PflMI CCANNNNNTGG 1 cut(s) 584
PfoI TCCNGGA 1 cut(s) 887
PkrI GCNGC 4 cut(s) 317, 1159, 1389, 1708
PleI GAGTC 2 cut(s) 302, 815
PpsI GAGTC 2 cut(s) 302, 815
PpuMI RGGWCCY 1 cut(s) 366
Psp124BI GAGCTC 1 cut(s) 1680
Psp5II RGGWCCY 1 cut(s) 366
Psp6I CCWGG 2 cut(s) 887, 932
PspFI CCCAGC 1 cut(s) 107
PspGI CCWGG 2 cut(s) 887, 932
PspN4I GGNNCC 7 cut(s) 206, 319, 367, 693, 709, 1220, 1513
PspPI GGNCC 6 cut(s) 205, 366, 515, 792, 980, 1009
PspPPI RGGWCCY 1 cut(s) 366
RsaI GTAC 6 cut(s) 187, 329, 451, 939, 998, 1032
RsaNI GTAC 6 cut(s) 186, 328, 450, 938, 997, 1031
RseI CAYNNNNRTG 1 cut(s) 1529
SacI GAGCTC 1 cut(s) 1680
SaqAI TTAA 6 cut(s) 713, 942, 1113, 1304, 1434, 1757
SatI GCNGC 4 cut(s) 316, 1158, 1388, 1707
Sau3AI GATC 2 cut(s) 729, 1789
Sau96I GGNCC 6 cut(s) 205, 366, 515, 792, 980, 1009
ScaI AGTACT 1 cut(s) 451
SchI GAGTC 2 cut(s) 302, 816
ScrFI CCNGG 3 cut(s) 364, 889, 934
SduI GDGCHC 2 cut(s) 1680, 1783
SfaNI GCATC 4 cut(s) 139, 549, 1198, 1860
SfuI TTCGAA 2 cut(s) 966, 1839
SinI GGWCC 3 cut(s) 205, 366, 792
SmiMI CAYNNNNRTG 1 cut(s) 1529
SmlI CTYRAG 1 cut(s) 286
SmoI CTYRAG 1 cut(s) 286
SsiI CCGC 8 cut(s) 22, 159, 250, 315, 470, 536, 818, 1725
SspMI CTAG 6 cut(s) 264, 353, 815, 984, 1557, 1800
SstI GAGCTC 1 cut(s) 1680
StyD4I CCNGG 3 cut(s) 362, 887, 932
StyI CCWWGG 6 cut(s) 578, 849, 983, 1366, 1477, 1515
TaaI ACNGT 3 cut(s) 69, 332, 1265
TaiI ACGT 2 cut(s) 198, 563
TatI WGTACW 2 cut(s) 449, 1030
TauI GCSGC 1 cut(s) 318
TfiI GAWTC 8 cut(s) 503, 670, 952, 1195, 1274, 1424, 1565, 1628
Tru1I TTAA 6 cut(s) 713, 942, 1113, 1304, 1434, 1757
Tru9I TTAA 6 cut(s) 713, 942, 1113, 1304, 1434, 1757
TscAI CASTG 1 cut(s) 658
TseFI GTSAC 1 cut(s) 1919
TseI GCWGC 3 cut(s) 1157, 1387, 1706
Tsp45I GTSAC 1 cut(s) 1919
TspDTI ATGAA 6 cut(s) 868, 1017, 1072, 1109, 1243, 1653
TspRI CASTG 1 cut(s) 658
Van91I CCANNNNNTGG 1 cut(s) 584
VpaK11BI GGWCC 3 cut(s) 205, 366, 792
XapI RAATTY 4 cut(s) 742, 962, 1250, 2002
XcmI CCANNNNNNNNNTGG 4 cut(s) 136, 1267, 1522, 1861
XmaJI CCTAGG 1 cut(s) 983
XmiI GTMKAC 2 cut(s) 1245, 1473
XspI CTAG 6 cut(s) 264, 353, 815, 984, 1557, 1800
ZrmI AGTACT 1 cut(s) 451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.