UPF0481 protein At3g47200-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0226281 |
| rosa_rugosa | Rorug05G0228300 |
| rosa_samantha | Rh7AG383000 Rh7AG383100 Rh7CG402500 Rh7CG402600 Rh7DG381300 Rh7DG381400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 4 cut(s) | 210, 254, 293, 422 |
| AflII | CTTAAG | 1 cut(s) | 449 |
| AgsI | TTSAA | 6 cut(s) | 30, 98, 154, 314, 377, 422 |
| AluBI | AGCT | 7 cut(s) | 11, 178, 227, 235, 325, 448, 463 |
| AluI | AGCT | 7 cut(s) | 11, 178, 227, 235, 325, 448, 463 |
| Alw21I | GWGCWC | 1 cut(s) | 180 |
| ApoI | RAATTY | 4 cut(s) | 210, 254, 293, 422 |
| AsuHPI | GGTGA | 1 cut(s) | 117 |
| BanII | GRGCYC | 1 cut(s) | 180 |
| Bbv12I | GWGCWC | 1 cut(s) | 180 |
| BccI | CCATC | 2 cut(s) | 64, 155 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 526, 560 |
| BfaI | CTAG | 3 cut(s) | 246, 332, 437 |
| BfrI | CTTAAG | 1 cut(s) | 449 |
| BglII | AGATCT | 1 cut(s) | 187 |
| BpuEI | CTTGAG | 2 cut(s) | 23, 382 |
| Bse3DI | GCAATG | 1 cut(s) | 366 |
| BseGI | GGATG | 2 cut(s) | 85, 180 |
| BseMI | GCAATG | 1 cut(s) | 366 |
| BseMII | CTCAG | 2 cut(s) | 165, 350 |
| BseRI | GAGGAG | 1 cut(s) | 521 |
| BsiHKAI | GWGCWC | 1 cut(s) | 180 |
| BsmI | GAATGC | 1 cut(s) | 26 |
| Bsp1286I | GDGCHC | 1 cut(s) | 180 |
| Bsp143I | GATC | 3 cut(s) | 82, 187, 337 |
| BspCNI | CTCAG | 2 cut(s) | 166, 351 |
| BspTI | CTTAAG | 1 cut(s) | 449 |
| BsrDI | GCAATG | 1 cut(s) | 366 |
| BssMI | GATC | 3 cut(s) | 82, 187, 337 |
| Bst6I | CTCTTC | 1 cut(s) | 92 |
| BstAFI | CTTAAG | 1 cut(s) | 449 |
| BstDEI | CTNAG | 3 cut(s) | 174, 283, 359 |
| BstEII | GGTNACC | 1 cut(s) | 566 |
| BstF5I | GGATG | 2 cut(s) | 85, 180 |
| BstKTI | GATC | 3 cut(s) | 85, 190, 340 |
| BstMBI | GATC | 3 cut(s) | 82, 187, 337 |
| BstPI | GGTNACC | 1 cut(s) | 566 |
| BstX2I | RGATCY | 1 cut(s) | 187 |
| BstYI | RGATCY | 1 cut(s) | 187 |
| BtsCI | GGATG | 2 cut(s) | 85, 180 |
| BtsIMutI | CAGTG | 1 cut(s) | 171 |
| CseI | GACGC | 1 cut(s) | 464 |
| CviAII | CATG | 2 cut(s) | 220, 349 |
| DdeI | CTNAG | 3 cut(s) | 174, 283, 359 |
| DpnI | GATC | 3 cut(s) | 84, 189, 339 |
| DpnII | GATC | 3 cut(s) | 82, 187, 337 |
| Eam1104I | CTCTTC | 1 cut(s) | 92 |
| EarI | CTCTTC | 1 cut(s) | 92 |
| Ecl136II | GAGCTC | 1 cut(s) | 178 |
| Eco24I | GRGCYC | 1 cut(s) | 180 |
| Eco32I | GATATC | 1 cut(s) | 289 |
| Eco53kI | GAGCTC | 1 cut(s) | 178 |
| Eco91I | GGTNACC | 1 cut(s) | 566 |
| EcoICRI | GAGCTC | 1 cut(s) | 178 |
| EcoO65I | GGTNACC | 1 cut(s) | 566 |
| EcoRI | GAATTC | 1 cut(s) | 422 |
| EcoRV | GATATC | 1 cut(s) | 289 |
| EcoT38I | GRGCYC | 1 cut(s) | 180 |
| FaeI | CATG | 2 cut(s) | 223, 352 |
| FaiI | YATR | 8 cut(s) | 14, 221, 350, 355, 415, 417, 474, 504 |
| FatI | CATG | 2 cut(s) | 219, 348 |
| FauNDI | CATATG | 1 cut(s) | 415 |
| FokI | GGATG | 2 cut(s) | 92, 167 |
| FriOI | GRGCYC | 1 cut(s) | 180 |
| FspBI | CTAG | 3 cut(s) | 246, 332, 437 |
| HgaI | GACGC | 1 cut(s) | 464 |
| Hin1II | CATG | 2 cut(s) | 223, 352 |
| HindIII | AAGCTT | 3 cut(s) | 233, 446, 461 |
| HinfI | GANTC | 1 cut(s) | 402 |
| HphI | GGTGA | 1 cut(s) | 117 |
| Hpy166II | GTNNAC | 1 cut(s) | 442 |
| Hpy188III | TCNNGA | 3 cut(s) | 399, 427, 487 |
| Hpy8I | GTNNAC | 1 cut(s) | 442 |
| HpyCH4V | TGCA | 3 cut(s) | 108, 371, 515 |
| HpyF3I | CTNAG | 3 cut(s) | 174, 283, 359 |
| Hsp92II | CATG | 2 cut(s) | 223, 352 |
| Kzo9I | GATC | 3 cut(s) | 82, 187, 337 |
| LmnI | GCTCC | 1 cut(s) | 389 |
| LpnPI | CCDG | 2 cut(s) | 198, 548 |
| MaeI | CTAG | 3 cut(s) | 246, 332, 437 |
| MaeIII | GTNAC | 2 cut(s) | 123, 566 |
| MalI | GATC | 3 cut(s) | 84, 189, 339 |
| MboI | GATC | 3 cut(s) | 82, 187, 337 |
| MboII | GAAGA | 4 cut(s) | 17, 79, 128, 142 |
| MflI | RGATCY | 1 cut(s) | 187 |
| MhlI | GDGCHC | 1 cut(s) | 180 |
| MluCI | AATT | 7 cut(s) | 110, 119, 210, 254, 293, 422, 577 |
| MlyI | GAGTC | 1 cut(s) | 396 |
| MnlI | CCTC | 3 cut(s) | 262, 406, 499 |
| MseI | TTAA | 3 cut(s) | 252, 258, 450 |
| MslI | CAYNNNNRTG | 1 cut(s) | 305 |
| MspCI | CTTAAG | 1 cut(s) | 449 |
| Mva1269I | GAATGC | 1 cut(s) | 26 |
| NdeI | CATATG | 1 cut(s) | 415 |
| NdeII | GATC | 3 cut(s) | 82, 187, 337 |
| NlaIII | CATG | 2 cut(s) | 223, 352 |
| NmuCI | GTSAC | 1 cut(s) | 123 |
| PctI | GAATGC | 1 cut(s) | 26 |
| PleI | GAGTC | 1 cut(s) | 396 |
| PpsI | GAGTC | 1 cut(s) | 396 |
| Psp124BI | GAGCTC | 1 cut(s) | 180 |
| PspEI | GGTNACC | 1 cut(s) | 566 |
| PsuI | RGATCY | 1 cut(s) | 187 |
| RseI | CAYNNNNRTG | 1 cut(s) | 305 |
| SacI | GAGCTC | 1 cut(s) | 180 |
| SaqAI | TTAA | 3 cut(s) | 252, 258, 450 |
| Sau3AI | GATC | 3 cut(s) | 82, 187, 337 |
| SchI | GAGTC | 1 cut(s) | 396 |
| SduI | GDGCHC | 1 cut(s) | 180 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 305 |
| SmlI | CTYRAG | 3 cut(s) | 38, 397, 449 |
| SmoI | CTYRAG | 3 cut(s) | 38, 397, 449 |
| Sse9I | AATT | 7 cut(s) | 110, 119, 210, 254, 293, 422, 577 |
| SspMI | CTAG | 3 cut(s) | 246, 332, 437 |
| SstI | GAGCTC | 1 cut(s) | 180 |
| TaqI | TCGA | 1 cut(s) | 486 |
| TasI | AATT | 7 cut(s) | 110, 119, 210, 254, 293, 422, 577 |
| Tru1I | TTAA | 3 cut(s) | 252, 258, 450 |
| Tru9I | TTAA | 3 cut(s) | 252, 258, 450 |
| TscAI | CASTG | 1 cut(s) | 178 |
| TseFI | GTSAC | 1 cut(s) | 123 |
| Tsp45I | GTSAC | 1 cut(s) | 123 |
| TspDTI | ATGAA | 5 cut(s) | 79, 204, 208, 227, 355 |
| TspRI | CASTG | 1 cut(s) | 178 |
| Vha464I | CTTAAG | 1 cut(s) | 449 |
| XapI | RAATTY | 4 cut(s) | 210, 254, 293, 422 |
| XspI | CTAG | 3 cut(s) | 246, 332, 437 |