Rorug05G0315000

Ring finger domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0019211
Physical Location & Seq
Forward (+)
37391248 .. 37397137
5890 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0315000.1

Sequence Viewer

Length: 2244 bp
ATGGGGAAACTGGGGAAGAAGGCCAGGAAGTTTTCCAAGAAGAATCTTCAGTCTGTCGAGAGAAGAAACCGAAAGTTGAAGTCCACCTTCAAAAAGAGAGGTCCCAAGAGAAATGAGCAAGGTAGTGGTGAAGAATTGAAGAAGAAGGACGCGGTAGAGTTGTCTAATGGGAGAAACACTGAAGTTGAATACATAGACGACACTCCTCTTGACGCAATATTCCATGAAGATGATAGTGATGCGTTTGGAGATGAATCGGACAGTGATGGGTATCTTTCAGAGGACTCAAGTGAAATGCATCTTGCTGACAGTGAAATTGAGAATTCTCAAGAAGGCAACCTTGATGATAGTAGTGGTGCTTTATCTATTCAGAACAAGGAAATTCAATTAGAGCTTGTGAAGAAAACAAAAAAACTAGACAAATTGAAGGAAAAGGATCCTGAATTTGCCAACTTTTTGGAAAGCTATCATAAGGAGCGTGAACAGTTCAGAAACAAAGATTATGCTGATGAGGATGAGGATGAGGATGAGATGAGTGATGATAATATGCAGCCAGAGAATGTAGACGGTGTGAATTTTAATTGGGGCAAGCTGCTGACAAGCTCTTCTGTTGATTCCTTGTGTCAACTAGTCACAGAGCAACAAAATGTGTCTGCACTTACTAGTCTATTGAATGGGTACCGGGCTGCATGCCACTATGGAGCAGAATCAACTAGAGTATTTGATGCTTATTCAGGCCGTGGATTTCAGAATAGTGAAACCCTTAGCAAGATATTGATGTTCATCCTTAATGAAGTTGATAACATATTTAGGGGGCTAATGGGCCTACCAAGCTTGGATTCCAAAAGAGAGAAGAGTGTGGATTTGAAGAAGAATACCAAATGGAGTACTTTTAAGCCACTGATAAAGTCATATCTGAGGAGTACCCTTTTTCTCCTGAATCAGGTTGATGACTCTGAGATATTGGCCTTCTCCTTGGCACGGATCAGAGCTTCTATAACCTTTTTTAATGCTTTTCCTTCTTTGCTCCGCAGACTTATCAAGATTGCCGTTCACTTGTGGGCAACAGGGAGAGGAACTGTATCATCTCTATCCTTTCTCATCATACGAGATGTGGCTTCTGTGTTTCGCTCTGATTACTTCGACACCTGCTTTGTTAAGACATATAAATCGTTCCTTGGTCATAGCCAATTTGTGGAGCCTGGTCTGTTCCAACACATACAATTTTTAAGAAGTTCCATTATTGATCTATGCTCTGTCGATGTTCAGAAAGCATCTAGCAAAGCATTGGTTTGTATCCAGCAACTTTCTAAGATAATGCAGCAGGGTCTACGGACAAAGAAAAAGGAAGCAGTCAAGAAGATATGCAGTTGGCAATACACGAGTTGCATTGATCTCTGGGTAATGTTTATATCAGCTAACATACAGGATTATGATCTTCAGCCATCGCTTTTTATGGTCATTCAGATTATAAATGGAGTGGCTGTGTTGTTTTCTGGACCAAGATATTTGCCTCTGAGAATCAAATGCATTCAATGGTTGAATCGTCTCTCCTCTTCCAGTGGCATTTTCATTCCTGTTGCCTCTTTCGTGTTGGATATCTTAGAATATAAAATTAGCAAGGATGGCGCGAAACCTGGAAAAGCTTTCAACCATTTATCTTCCGTAAAGCTTCCAAAGCATTGGTTAAAGTCAAGGAACTTCCAAGAGCAGTGTGTTTTATCTGCTATCGAACTGCTTTCAGCGCACTTCGCTCAGTGGAGCCATCATATATCGTTTCCAGATCTTGCAACTATTCCACTTATTTGCTTGAAGAAGTTTCATGAGATAACTACTATAGAAAGTTCCAAGCGTGTAGTGAAGCGTTTCATTGACCAGGTGGAGCAAAACATTGAATTTATTCGGAAGAAGAGAGATGAGACAGCCTTTTCACCAACAGATCAGCAATCTGCAGATTTATTTCTTCCGCTTGAAAAGCAAAATGCCAGTACTCCATTTACACAATATTACAAAAGCATCATGGACAAGGCTGCTTCTAGAAACTTAACTCTGAATGAAAAGTTCTCTGAAGCAAAGGAAATAAAGAAGAAAACACAAAGGAAAATACAAGTGCCTCAAGATAACTGTTTAACTGAGGGAGTTAAAAGCAAACATCCAGAGAAAAGAAAAGGCATTGTTGATATCAAAGGTGGAAGAGAAAGAAAGTTGAAGAAAAAAGAAACTATTGAAGGCCAAGTCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

747

Amino Acids

85.28

Weight (kDa)

8.92

Isoelectric Point (pI)

43.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Noc2 PF03715 380 - 672 5.1e-86 Noc2p family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019211)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21620
rosa_laevigata RLG00000035223
rosa_multiflora Rmu_sc0000367.1_g000123
rosa_roxburghii Rroxscaffold_1G00022070
rosa_rugosa Rorug05G0315000
rosa_samantha Rh5CG417200 Rh5DG408200
rosa_wichuraiana Rw5G035940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1472
AarI CACCTGC 1 cut(s) 1157
Acc36I ACCTGC 1 cut(s) 1157
Acc65I GGTACC 1 cut(s) 678
AccB1I GGYRCC 1 cut(s) 678
AccB7I CCANNNNNTGG 1 cut(s) 1195
AccI GTMKAC 2 cut(s) 564, 1330
AccII CGCG 2 cut(s) 152, 1631
AciI CCGC 3 cut(s) 152, 1030, 1967
AclWI GGATC 3 cut(s) 431, 444, 992
AcsI RAATTY 5 cut(s) 322, 381, 443, 574, 1895
AcuI CTGAAG 4 cut(s) 32, 201, 1424, 2088
AfaI GTAC 4 cut(s) 680, 889, 925, 1990
AfiI CCNNNNNNNGG 3 cut(s) 943, 981, 1195
AhlI ACTAGT 2 cut(s) 628, 662
AjnI CCWGG 4 cut(s) 23, 1201, 1636, 1875
AjuI GAANNNNNNNTTGG 2 cut(s) 823, 855
AluBI AGCT 9 cut(s) 394, 465, 592, 603, 834, 992, 1418, 1646, 1672
AluI AGCT 9 cut(s) 394, 465, 592, 603, 834, 992, 1418, 1646, 1672
Alw26I GTCTC 2 cut(s) 1553, 1913
AlwI GGATC 3 cut(s) 431, 444, 992
AoxI GGCC 5 cut(s) 21, 736, 823, 966, 2230
ApeKI GCWGC 5 cut(s) 550, 592, 686, 1321, 2030
ApoI RAATTY 5 cut(s) 322, 381, 443, 574, 1895
ArsI GACNNNNNNTTYG 2 cut(s) 1136, 1168
Asp700I GAANNNNTTC 2 cut(s) 1865, 1899
Asp718I GGTACC 1 cut(s) 678
AspLEI GCGC 2 cut(s) 1631, 1747
AspS9I GGNCC 3 cut(s) 101, 823, 1499
AsuC2I CCSGG 1 cut(s) 683
AsuHPI GGTGA 2 cut(s) 140, 1923
AvaII GGWCC 2 cut(s) 101, 1499
BamHI GGATCC 1 cut(s) 436
BanI GGYRCC 1 cut(s) 678
BauI CACGAG 1 cut(s) 1381
BbvI GCAGC 5 cut(s) 562, 579, 673, 1333, 2017
BccI CCATC 4 cut(s) 260, 1453, 1619, 1773
BceAI ACGGC 2 cut(s) 723, 1034
BciT130I CCWGG 4 cut(s) 25, 1203, 1638, 1877
BciVI GTATCC 1 cut(s) 1307
BcnI CCSGG 1 cut(s) 683
BcoDI GTCTC 2 cut(s) 1553, 1913
BcuI ACTAGT 2 cut(s) 628, 662
BfaI CTAG 6 cut(s) 416, 629, 663, 714, 1278, 2037
BfmI CTRYAG 2 cut(s) 1836, 1950
BfuAI ACCTGC 1 cut(s) 1157
BfuI GTATCC 1 cut(s) 1307
BglII AGATCT 1 cut(s) 1783
BisI GCNGC 5 cut(s) 551, 593, 687, 1322, 2031
BlsI GCNGC 5 cut(s) 552, 594, 688, 1323, 2032
BmcAI AGTACT 2 cut(s) 889, 1990
Bme1390I CCNGG 5 cut(s) 25, 683, 1203, 1638, 1877
Bme18I GGWCC 2 cut(s) 101, 1499
BmgT120I GGNCC 3 cut(s) 101, 823, 1499
BmiI GGNNCC 5 cut(s) 103, 438, 680, 1200, 1763
BmrFI CCNGG 5 cut(s) 25, 683, 1203, 1638, 1877
BmrI ACTGGG 1 cut(s) 20
BmsI GCATC 5 cut(s) 229, 307, 715, 1283, 2025
BmuI ACTGGG 1 cut(s) 20
Bpu10I CCTNAGC 1 cut(s) 764
BpuEI CTTGAG 3 cut(s) 271, 312, 2100
BpuMI CCSGG 1 cut(s) 683
BsaBI GATNNNNATC 3 cut(s) 270, 782, 1434
BsaJI CCNNGG 3 cut(s) 739, 975, 1177
BsaXI ACNNNNNCTCC 2 cut(s) 1470, 1500
Bsc4I CCNNNNNNNGG 3 cut(s) 943, 981, 1195
Bse1I ACTGG 3 cut(s) 15, 1560, 1986
Bse8I GATNNNNATC 3 cut(s) 270, 782, 1434
BseBI CCWGG 4 cut(s) 25, 1203, 1638, 1877
BseDI CCNNGG 3 cut(s) 739, 975, 1177
BseGI GGATG 6 cut(s) 520, 526, 532, 783, 1630, 2152
BseJI GATNNNNATC 3 cut(s) 270, 782, 1434
BseLI CCNNNNNNNGG 3 cut(s) 943, 981, 1195
BseMII CTCAG 5 cut(s) 908, 948, 1508, 1769, 2124
BseNI ACTGG 3 cut(s) 15, 1560, 1986
BseRI GAGGAG 3 cut(s) 195, 934, 1543
BseXI GCAGC 5 cut(s) 562, 579, 673, 1333, 2017
BsgI GTGCAG 1 cut(s) 639
Bsh1236I CGCG 2 cut(s) 152, 1631
BshFI GGCC 5 cut(s) 23, 738, 825, 968, 2232
BshNI GGYRCC 1 cut(s) 678
BsiSI CCGG 1 cut(s) 682
BslFI GGGAC 1 cut(s) 87
BslI CCNNNNNNNGG 3 cut(s) 943, 981, 1195
BsmAI GTCTC 2 cut(s) 1553, 1913
BsmBI CGTCTC 1 cut(s) 1553
BsmFI GGGAC 1 cut(s) 87
BsmI GAATGC 1 cut(s) 1530
BsnI GGCC 5 cut(s) 23, 738, 825, 968, 2232
Bsp143I GATC 7 cut(s) 436, 984, 1246, 1393, 1435, 1783, 1939
BspACI CCGC 3 cut(s) 152, 1030, 1967
BspANI GGCC 5 cut(s) 23, 738, 825, 968, 2232
BspCNI CTCAG 5 cut(s) 909, 949, 1509, 1768, 2125
BspFNI CGCG 2 cut(s) 152, 1631
BspHI TCATGA 1 cut(s) 1822
BspLI GGNNCC 5 cut(s) 103, 438, 680, 1200, 1763
BspMAI CTGCAG 1 cut(s) 1954
BspMI ACCTGC 1 cut(s) 1157
BspPI GGATC 3 cut(s) 431, 444, 992
BspQI GCTCTTC 1 cut(s) 610
BspT107I GGYRCC 1 cut(s) 678
BsrI ACTGG 3 cut(s) 15, 1560, 1986
BssECI CCNNGG 3 cut(s) 739, 975, 1177
BssMI GATC 7 cut(s) 436, 984, 1246, 1393, 1435, 1783, 1939
BssSI CACGAG 1 cut(s) 1381
BssT1I CCWWGG 2 cut(s) 975, 1177
Bst2BI CACGAG 1 cut(s) 1381
Bst2UI CCWGG 4 cut(s) 25, 1203, 1638, 1877
Bst4CI ACNGT 6 cut(s) 263, 311, 486, 569, 1081, 2126
Bst6I CTCTTC 5 cut(s) 610, 848, 1561, 1904, 2188
BstC8I GCNNGC 2 cut(s) 590, 691
BstDEI CTNAG 8 cut(s) 764, 917, 957, 1311, 1517, 1603, 1755, 2133
BstDSI CCRYGG 1 cut(s) 739
BstENI CCTNNNNNAGG 1 cut(s) 941
BstF5I GGATG 6 cut(s) 520, 526, 532, 783, 1630, 2152
BstFNI CGCG 2 cut(s) 152, 1631
BstHHI GCGC 2 cut(s) 1631, 1747
BstKTI GATC 7 cut(s) 439, 987, 1249, 1396, 1438, 1786, 1942
BstMAI GTCTC 2 cut(s) 1553, 1913
BstMBI GATC 7 cut(s) 436, 984, 1246, 1393, 1435, 1783, 1939
BstMWI GCNNNNNNNGC 6 cut(s) 831, 1626, 1678, 1744, 1751, 1975
BstNI CCWGG 4 cut(s) 25, 1203, 1638, 1877
BstNSI RCATGY 1 cut(s) 693
BstSCI CCNGG 5 cut(s) 23, 681, 1201, 1636, 1875
BstSFI CTRYAG 2 cut(s) 1836, 1950
BstUI CGCG 2 cut(s) 152, 1631
BstV1I GCAGC 5 cut(s) 562, 579, 673, 1333, 2017
BstX2I RGATCY 2 cut(s) 436, 1783
BstXI CCANNNNNNTGG 2 cut(s) 457, 1683
BstYI RGATCY 2 cut(s) 436, 1783
BsuI GTATCC 1 cut(s) 1307
BsuRI GGCC 5 cut(s) 23, 738, 825, 968, 2232
BtgI CCRYGG 1 cut(s) 739
BtgZI GCGATG 1 cut(s) 1431
BtsCI GGATG 6 cut(s) 520, 526, 532, 783, 1630, 2152
BtsI GCAGTG 1 cut(s) 1718
BtsIMutI CAGTG 7 cut(s) 177, 268, 316, 899, 1567, 1718, 1763
BveI ACCTGC 1 cut(s) 1157
Cac8I GCNNGC 2 cut(s) 590, 691
CciI TCATGA 1 cut(s) 1822
CfoI GCGC 2 cut(s) 1631, 1747
Cfr13I GGNCC 3 cut(s) 101, 823, 1499
CseI GACGC 2 cut(s) 158, 221
CsiI ACCWGGT 1 cut(s) 1875
Csp6I GTAC 4 cut(s) 679, 888, 924, 1989
CviAII CATG 4 cut(s) 224, 690, 1823, 2020
CviQI GTAC 4 cut(s) 679, 888, 924, 1989
DdeI CTNAG 8 cut(s) 764, 917, 957, 1311, 1517, 1603, 1755, 2133
DpnI GATC 7 cut(s) 438, 986, 1248, 1395, 1437, 1785, 1941
DpnII GATC 7 cut(s) 436, 984, 1246, 1393, 1435, 1783, 1939
Eam1104I CTCTTC 5 cut(s) 610, 848, 1561, 1904, 2188
EarI CTCTTC 5 cut(s) 610, 848, 1561, 1904, 2188
Eco130I CCWWGG 2 cut(s) 975, 1177
Eco32I GATATC 2 cut(s) 1600, 2182
Eco47I GGWCC 2 cut(s) 101, 1499
Eco57I CTGAAG 4 cut(s) 32, 201, 1424, 2088
EcoNI CCTNNNNNAGG 1 cut(s) 941
EcoO109I RGGNCCY 1 cut(s) 101
EcoRI GAATTC 1 cut(s) 322
EcoRII CCWGG 4 cut(s) 23, 1201, 1636, 1875
EcoRV GATATC 2 cut(s) 1600, 2182
EcoT14I CCWWGG 2 cut(s) 975, 1177
EcoT22I ATGCAT 2 cut(s) 300, 1532
ErhI CCWWGG 2 cut(s) 975, 1177
Esp3I CGTCTC 1 cut(s) 1553
FaeI CATG 4 cut(s) 227, 693, 1826, 2023
FalI AAGNNNNNCTT 4 cut(s) 71, 103, 324, 356
FaqI GGGAC 1 cut(s) 87
FatI CATG 4 cut(s) 223, 689, 1822, 2019
FblI GTMKAC 2 cut(s) 564, 1330
Fnu4HI GCNGC 5 cut(s) 551, 593, 687, 1322, 2031
FokI GGATG 6 cut(s) 527, 533, 539, 770, 1637, 2139
Fsp4HI GCNGC 5 cut(s) 551, 593, 687, 1322, 2031
FspBI CTAG 6 cut(s) 416, 629, 663, 714, 1278, 2037
GlaI GCGC 2 cut(s) 1630, 1746
GluI GCNGC 5 cut(s) 551, 593, 687, 1322, 2031
HaeIII GGCC 5 cut(s) 23, 738, 825, 968, 2232
HapII CCGG 1 cut(s) 682
HgaI GACGC 2 cut(s) 158, 221
HhaI GCGC 2 cut(s) 1631, 1747
Hin1II CATG 4 cut(s) 227, 693, 1826, 2023
Hin6I GCGC 2 cut(s) 1629, 1745
HinP1I GCGC 2 cut(s) 1629, 1745
HincII GTYRAC 1 cut(s) 626
HindII GTYRAC 1 cut(s) 626
HindIII AAGCTT 3 cut(s) 832, 1644, 1670
HpaII CCGG 1 cut(s) 682
HphI GGTGA 2 cut(s) 140, 1923
Hpy166II GTNNAC 6 cut(s) 84, 482, 565, 626, 1054, 1331
Hpy8I GTNNAC 6 cut(s) 84, 482, 565, 626, 1054, 1331
HpyAV CCTTC 8 cut(s) 13, 97, 139, 326, 421, 979, 1029, 2222
HpyCH4III ACNGT 6 cut(s) 263, 311, 486, 569, 1081, 2126
HpyF10VI GCNNNNNNNGC 6 cut(s) 831, 1626, 1678, 1744, 1751, 1975
HpyF3I CTNAG 8 cut(s) 764, 917, 957, 1311, 1517, 1603, 1755, 2133
Hsp92II CATG 4 cut(s) 227, 693, 1826, 2023
HspAI GCGC 2 cut(s) 1629, 1745
KpnI GGTACC 1 cut(s) 682
Kzo9I GATC 7 cut(s) 436, 984, 1246, 1393, 1435, 1783, 1939
LguI GCTCTTC 1 cut(s) 610
LmnI GCTCC 6 cut(s) 475, 701, 1032, 1198, 1761, 1882
Lsp1109I GCAGC 5 cut(s) 562, 579, 673, 1333, 2017
LweI GCATC 5 cut(s) 229, 307, 715, 1283, 2025
MabI ACCWGGT 1 cut(s) 1875
MaeI CTAG 6 cut(s) 416, 629, 663, 714, 1278, 2037
MaeIII GTNAC 1 cut(s) 631
MalI GATC 7 cut(s) 438, 986, 1248, 1395, 1437, 1785, 1941
MboI GATC 7 cut(s) 436, 984, 1246, 1393, 1435, 1783, 1939
MflI RGATCY 2 cut(s) 436, 1783
MlyI GAGTC 2 cut(s) 278, 947
MmeI TCCRAC 2 cut(s) 1237, 1575
Mph1103I ATGCAT 2 cut(s) 300, 1532
MroXI GAANNNNTTC 2 cut(s) 1865, 1899
MslI CAYNNNNRTG 1 cut(s) 228
MspI CCGG 1 cut(s) 682
MspR9I CCNGG 5 cut(s) 25, 683, 1203, 1638, 1877
Mva1269I GAATGC 1 cut(s) 1530
MvaI CCWGG 4 cut(s) 25, 1203, 1638, 1877
MvnI CGCG 2 cut(s) 152, 1631
MwoI GCNNNNNNNGC 6 cut(s) 831, 1626, 1678, 1744, 1751, 1975
NciI CCSGG 1 cut(s) 683
NdeII GATC 7 cut(s) 436, 984, 1246, 1393, 1435, 1783, 1939
NlaIII CATG 4 cut(s) 227, 693, 1826, 2023
NlaIV GGNNCC 5 cut(s) 103, 438, 680, 1200, 1763
NmuCI GTSAC 1 cut(s) 631
NsiI ATGCAT 2 cut(s) 300, 1532
NspI RCATGY 1 cut(s) 693
PaeI GCATGC 1 cut(s) 693
PagI TCATGA 1 cut(s) 1822
PaqCI CACCTGC 1 cut(s) 1157
PciSI GCTCTTC 1 cut(s) 610
PctI GAATGC 1 cut(s) 1530
PdmI GAANNNNTTC 2 cut(s) 1865, 1899
PfeI GAWTC 8 cut(s) 43, 254, 614, 707, 839, 940, 1521, 1543
PflMI CCANNNNNTGG 1 cut(s) 1195
PkrI GCNGC 5 cut(s) 552, 594, 688, 1323, 2032
PleI GAGTC 2 cut(s) 278, 947
PpsI GAGTC 2 cut(s) 278, 947
PpuMI RGGWCCY 1 cut(s) 101
PsiI TTATAA 1 cut(s) 1472
Psp5II RGGWCCY 1 cut(s) 101
Psp6I CCWGG 4 cut(s) 23, 1201, 1636, 1875
PspGI CCWGG 4 cut(s) 23, 1201, 1636, 1875
PspN4I GGNNCC 5 cut(s) 103, 438, 680, 1200, 1763
PspPI GGNCC 3 cut(s) 101, 823, 1499
PspPPI RGGWCCY 1 cut(s) 101
PstI CTGCAG 1 cut(s) 1954
PsuI RGATCY 2 cut(s) 436, 1783
RsaI GTAC 4 cut(s) 680, 889, 925, 1990
RsaNI GTAC 4 cut(s) 679, 888, 924, 1989
RseI CAYNNNNRTG 1 cut(s) 228
SapI GCTCTTC 1 cut(s) 610
SatI GCNGC 5 cut(s) 551, 593, 687, 1322, 2031
Sau3AI GATC 7 cut(s) 436, 984, 1246, 1393, 1435, 1783, 1939
Sau96I GGNCC 3 cut(s) 101, 823, 1499
ScaI AGTACT 2 cut(s) 889, 1990
SchI GAGTC 2 cut(s) 278, 947
ScrFI CCNGG 5 cut(s) 25, 683, 1203, 1638, 1877
SexAI ACCWGGT 1 cut(s) 1875
SfaNI GCATC 5 cut(s) 229, 307, 715, 1283, 2025
SfcI CTRYAG 2 cut(s) 1836, 1950
SinI GGWCC 2 cut(s) 101, 1499
SmiMI CAYNNNNRTG 1 cut(s) 228
SmlI CTYRAG 3 cut(s) 286, 327, 2115
SmoI CTYRAG 3 cut(s) 286, 327, 2115
SpeI ACTAGT 2 cut(s) 628, 662
SphI GCATGC 1 cut(s) 693
SsiI CCGC 3 cut(s) 152, 1030, 1967
SspI AATATT 2 cut(s) 219, 2006
SspMI CTAG 6 cut(s) 416, 629, 663, 714, 1278, 2037
StyD4I CCNGG 5 cut(s) 23, 681, 1201, 1636, 1875
StyI CCWWGG 2 cut(s) 975, 1177
TaaI ACNGT 6 cut(s) 263, 311, 486, 569, 1081, 2126
TaqI TCGA 4 cut(s) 57, 1143, 1260, 1731
TatI WGTACW 2 cut(s) 887, 1988
TfiI GAWTC 8 cut(s) 43, 254, 614, 707, 839, 940, 1521, 1543
TscAI CASTG 7 cut(s) 184, 268, 316, 906, 1567, 1718, 1763
TseFI GTSAC 1 cut(s) 631
TseI GCWGC 5 cut(s) 550, 592, 686, 1321, 2030
Tsp45I GTSAC 1 cut(s) 631
TspDTI ATGAA 8 cut(s) 240, 267, 772, 807, 1561, 1811, 1858, 2070
TspGWI ACGGA 3 cut(s) 997, 1348, 1654
TspRI CASTG 7 cut(s) 184, 268, 316, 906, 1567, 1718, 1763
Van91I CCANNNNNTGG 1 cut(s) 1195
VpaK11BI GGWCC 2 cut(s) 101, 1499
XagI CCTNNNNNAGG 1 cut(s) 941
XapI RAATTY 5 cut(s) 322, 381, 443, 574, 1895
XbaI TCTAGA 1 cut(s) 2036
XceI RCATGY 1 cut(s) 693
XmiI GTMKAC 2 cut(s) 564, 1330
XmnI GAANNNNTTC 2 cut(s) 1865, 1899
XspI CTAG 6 cut(s) 416, 629, 663, 714, 1278, 2037
ZrmI AGTACT 2 cut(s) 889, 1990
Zsp2I ATGCAT 2 cut(s) 300, 1532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.