Rorug05G0435400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0017147
Physical Location & Seq
Forward (+)
60413571 .. 60423570
10000 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0435400.1

Sequence Viewer

Length: 2463 bp
ATGGAGAAGTTCCTGGACAAGTTGCCCTCCATGGATCTGATGCGCTCCGAGAAGATGACCTTCGTCCAGCTCATCATCCCCGTCGAGTCTGCTCACCGCACCATTTCCTATCTCGGCGAACTCGGCCTCCTCCAATTCCGTGACTTAAATGCTGATAAAAGCCCTTTCCAGCTAACCTTTGTTAATCAGGTGAAGCGATGTGCAGAGATGTCAAGAAAGCTGCGCTTTTTTAAGGATCAAATCAGTAAAGCTGGTCTGCTTGGGTCTATACGTCCAGTTTCACAACCAGATATTGAGTTGGAGGAATTAGAGTTTCAACTTGGTGAGCACGAACATGAGCTAATTGAAATGAACTCTAATAGTGAAAGACTTCGACAATCATACAATGAGCTCCTGGAGTTCAAGATGGTATTACAAAAGGCAAGTGGCTTTCTTGTTTCAAGTAATAACCATGCTGTCACAGAGGAAACAGAACTAGAAGAGAATGTTTACTCAATGAATGACTATGGTGATTCAGTGTCATTGCTGGAGCAGGATATCAGACGGGGACCATCAGATCAATCTGGTTTGAATTTTGTTAGTGGGATTATTTGTAAATCTAAAGCTCTAAGGTTTGAGAGGATGCTGTTTCGTGCTACAAGGGGAAATATGCTTTTCAACCAAGCACCAGCAGATGAACATATCATGGATCCTTTATCTACTGAAATGGTTGAGCAGACAGTTTTTGTAGTCTTCTTCTCAGGGTTGCAGGCAAAAGCAAAGATTCTGAAAATTTGTGAGGCCTTTGGTGCAAATTGCTACCCTGTTCCTGAAGATATAACTAAGCAGAGGCAAATAACTAGAGAAGTTTCATCACGTCTTGCTGAATTGGAAGCAACTTTAGATGCAGGGATTCGCCACAGAAATAAGGCCCTTACTTCTGTCGGGTTTCACCTGGCAAAATGGATGAACATGGTAAGAAGAGAGAAAGCTGTATATGATACACTGAACATGTTAAACTTTGATGTTACCAAAAAATGCCTTGTTGGAGAAGGCTGGTGTCCTATATTTGCAAAAACAAAGATTCAGGAGGCATTGCAACGTGCAACATTTGATAGCAATTCACAAGTGGGTGTAATATTTCATGTGATGGATGCAATAGAATCACCTCCTACATATTTTAGAACCAACAACTTCACAAGTGCATTTCAGGAAATTGTTGATGCATATGGCGTAGCAAGATATCAAGAAGCAAATCCTGCAGTGTACACTGTCATTACATTTCCATTTCTTTTCGCTGTGATGTTTGGGGACTGGGGTCATGGAATATGCTTGTTGATGGGAGCATTAGTTCTTATAGCCCGTGAAAGAAAGCTCAGTGCTCAGAAACTCGGGAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTACTTCTTTTAATGTCTCTGTTCTCAATTTACTGTGGGTTGATTTACAATGAGTTCTTCTCTGTCCCTTTTCACATATTTGGTGGGTCTGCTTACAAATGCAGAGATGCTTCTTGCAGTGATGCACACACTGTTGGCTTAATCAAGTACAGAGATCCATACCCATTTGGTGTGGATCCTAGTTGGCGTGGAAGTCGTACAGAACTGCCCTTTTTGAATTCTCTCAAAATGAAATTGTCTATTTTGTTGGGTGTGGCGCAAATGAATGTAGGAATTATTCTCAGTTACTTCAATGCACGGTTTTTCAGCAGCTCAATTGATATAAGGTACCAGTTTGTGCCGCAGATGATCTTCCTTAACAGTCTTTTTGGATATCTTTCACTTCTAGTTGTCATCAAGTGGTGCACCGGCTCTAAGGCTGACCTCTATCATGTGATGATTTACATGTTCTTAAGTCCAACTGATGATCTTGGGGAAAATCAGTTGTTTTGGGGCCAAAGACCACTTCAGATCATTTTGTTACTCTTGGCTCTAATTGCAGTCCCTTGGATGCTCTTTCCAAAACCTTTCATTTTGAGGAAGCGTCATACAGAGAGGTTTCAAGGTCGCACATATGGGATGCTTGGTACCTCTGAAATGGATCTTGACGTGGAAACTGATTCTGTGAGGCAACATCATGAGGAGTTTAATTTCAGTGAGGTGTTTGTGCACCAGATGATACACTCCATAGAGTTTGTTCTTGGTGCAGTTTCAAATACGGCGTCCTACCTTCGATTGTGGGCTTTGAGCTTGGCCCACTCAGAGTTGTCAACTGTGTTCTACGAGAAAGTCCTTCTCCTCGCCTGGGGGTATGACAGCTTTATCATCCGGTTAATTGGGTTAGCAGTTTTTGCCTTTGCAACTGCCTTCATATTGCTCATGATGGAGACACTCAGCGCTTTTCTTCATGCCTTGCGTCTTCATTGGGTGGAATTTCAAAATAAGTTCTACCTTGGTGATGGGTACAAGTTCAAACCTTTTTCCTTCGCCTCCATAGCTACTGAGGATGAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

820

Amino Acids

93.81

Weight (kDa)

6.1

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
V_ATPase_I PF01496 37 - 811 3.7e-293 V-type ATPase 116kDa subunit family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017147)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G56120
fragaria_vesca FvH4_3g41800
prunus_persica Prupe.6G033100_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0074881
rosa_laevigata RLG00000036513
rosa_multiflora Rmu_sc0003945.1_g000017
rosa_roxburghii Rroxscaffold_1G00006690
rosa_rugosa Rorug05G0435400
rosa_samantha Rh5AG492500 Rh5BG513900 Rh5CG537600 Rh5DG526100
rosa_wichuraiana Rw5G045640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1734, 2033
AccB1I GGYRCC 2 cut(s) 1734, 2033
AciI CCGC 2 cut(s) 97, 1748
AclWI GGATC 8 cut(s) 42, 243, 683, 696, 1556, 1577, 1590, 2055
AcsI RAATTY 4 cut(s) 571, 771, 1624, 2378
AcuI CTGAAG 2 cut(s) 831, 1898
AcyI GRCGYC 1 cut(s) 2168
AfaI GTAC 7 cut(s) 1247, 1410, 1556, 1606, 1736, 2035, 2411
AfeI AGCGCT 1 cut(s) 2344
AfiI CCNNNNNNNGG 1 cut(s) 2251
AflII CTTAAG 1 cut(s) 1858
AflIII ACRYGT 2 cut(s) 990, 1851
AjiI CACGTC 2 cut(s) 857, 2056
AjnI CCWGG 4 cut(s) 12, 393, 933, 2249
AjuI GAANNNNNNNTTGG 2 cut(s) 1896, 1928
AloI GAACNNNNNNTCC 4 cut(s) 111, 143, 1314, 1346
Alw21I GWGCWC 5 cut(s) 330, 393, 1363, 1814, 2118
Alw26I GTCTC 2 cut(s) 1428, 2327
Alw44I GTGCAC 2 cut(s) 1810, 2114
AlwI GGATC 8 cut(s) 42, 243, 683, 696, 1556, 1577, 1590, 2055
Ama87I CYCGRG 1 cut(s) 1370
Aor51HI AGCGCT 1 cut(s) 2344
AoxI GGCC 5 cut(s) 124, 780, 909, 1900, 2199
ApaLI GTGCAC 2 cut(s) 1810, 2114
ApeKI GCWGC 2 cut(s) 220, 1716
ApoI RAATTY 4 cut(s) 571, 771, 1624, 2378
ArsI GACNNNNNNTTYG 2 cut(s) 2153, 2185
Asp700I GAANNNNTTC 1 cut(s) 369
Asp718I GGTACC 2 cut(s) 1734, 2033
AspLEI GCGC 5 cut(s) 45, 225, 1404, 1666, 2345
AspS9I GGNCC 4 cut(s) 548, 910, 1900, 2200
AsuHPI GGTGA 7 cut(s) 86, 202, 335, 521, 923, 1137, 2414
AvaI CYCGRG 1 cut(s) 1370
AvaII GGWCC 1 cut(s) 548
BaeGI GKGCMC 2 cut(s) 1814, 2118
BamHI GGATCC 2 cut(s) 688, 1582
BanI GGYRCC 2 cut(s) 1734, 2033
BanII GRGCYC 1 cut(s) 393
BbsI GAAGAC 2 cut(s) 724, 2357
Bbv12I GWGCWC 5 cut(s) 330, 393, 1363, 1814, 2118
BbvI GCAGC 2 cut(s) 207, 1728
BccI CCATC 6 cut(s) 400, 559, 1123, 1312, 2323, 2399
BceAI ACGGC 1 cut(s) 2181
BciT130I CCWGG 4 cut(s) 14, 395, 935, 2251
BcoDI GTCTC 2 cut(s) 1428, 2327
BfaI CTAG 4 cut(s) 476, 840, 1587, 1793
BfmI CTRYAG 1 cut(s) 1239
BfoI RGCGCY 2 cut(s) 1405, 2346
BfrI CTTAAG 1 cut(s) 1858
BisI GCNGC 3 cut(s) 221, 1717, 1748
BlsI GCNGC 3 cut(s) 222, 1718, 1749
Bme1390I CCNGG 4 cut(s) 14, 395, 935, 2251
Bme18I GGWCC 1 cut(s) 548
BmeT110I CYCGRG 1 cut(s) 1370
BmgBI CACGTC 2 cut(s) 857, 2056
BmgT120I GGNCC 4 cut(s) 548, 910, 1900, 2200
BmiI GGNNCC 6 cut(s) 549, 690, 1584, 1736, 1901, 2035
BmrFI CCNGG 4 cut(s) 14, 395, 935, 2251
BmrI ACTGGG 1 cut(s) 1303
BmuI ACTGGG 1 cut(s) 1303
BoxI GACNNNNGTC 2 cut(s) 62, 1296
BpiI GAAGAC 2 cut(s) 724, 2357
BplI GAGNNNNNCTC 2 cut(s) 1451, 1483
BpmI CTGGAG 2 cut(s) 416, 548
BsaHI GRCGYC 1 cut(s) 2168
BsaJI CCNNGG 4 cut(s) 30, 1952, 2250, 2398
BsaWI WCCGGW 1 cut(s) 2274
BsaXI ACNNNNNCTCC 4 cut(s) 111, 141, 1314, 1344
Bsc4I CCNNNNNNNGG 1 cut(s) 2251
Bse118I RCCGGY 1 cut(s) 1814
Bse1I ACTGG 3 cut(s) 275, 1298, 1738
Bse3DI GCAATG 2 cut(s) 521, 1073
BseBI CCWGG 4 cut(s) 14, 395, 935, 2251
BseDI CCNNGG 4 cut(s) 30, 1952, 2250, 2398
BseGI GGATG 8 cut(s) 75, 627, 951, 1138, 1962, 2031, 2271, 2458
BseLI CCNNNNNNNGG 1 cut(s) 2251
BseMI GCAATG 2 cut(s) 521, 1073
BseMII CTCAG 7 cut(s) 753, 1369, 1376, 1702, 2220, 2353, 2439
BseNI ACTGG 3 cut(s) 275, 1298, 1738
BseRI GAGGAG 3 cut(s) 119, 2102, 2234
BseSI GKGCMC 2 cut(s) 1814, 2118
BseXI GCAGC 2 cut(s) 207, 1728
BsgI GTGCAG 2 cut(s) 222, 2172
BshFI GGCC 5 cut(s) 126, 782, 911, 1902, 2201
BshNI GGYRCC 2 cut(s) 1734, 2033
BsiHKAI GWGCWC 5 cut(s) 330, 393, 1363, 1814, 2118
BsiHKCI CYCGRG 1 cut(s) 1370
BsiSI CCGG 2 cut(s) 1815, 2275
BslFI GGGAC 4 cut(s) 561, 1304, 1457, 1934
BslI CCNNNNNNNGG 1 cut(s) 2251
BsmAI GTCTC 2 cut(s) 1428, 2327
BsmFI GGGAC 4 cut(s) 561, 1304, 1457, 1934
BsnI GGCC 5 cut(s) 126, 782, 911, 1902, 2201
BsoBI CYCGRG 1 cut(s) 1370
Bsp1286I GDGCHC 5 cut(s) 330, 393, 1363, 1814, 2118
Bsp1407I TGTACA 1 cut(s) 1245
Bsp19I CCATGG 1 cut(s) 30
BspACI CCGC 2 cut(s) 97, 1748
BspANI GGCC 5 cut(s) 126, 782, 911, 1902, 2201
BspCNI CTCAG 7 cut(s) 752, 1368, 1375, 1701, 2219, 2352, 2440
BspHI TCATGA 2 cut(s) 2083, 2325
BspLI GGNNCC 6 cut(s) 549, 690, 1584, 1736, 1901, 2035
BspMAI CTGCAG 1 cut(s) 1243
BspPI GGATC 8 cut(s) 42, 243, 683, 696, 1556, 1577, 1590, 2055
BspT107I GGYRCC 2 cut(s) 1734, 2033
BspTI CTTAAG 1 cut(s) 1858
BsrDI GCAATG 2 cut(s) 521, 1073
BsrFI RCCGGY 1 cut(s) 1814
BsrGI TGTACA 1 cut(s) 1245
BsrI ACTGG 3 cut(s) 275, 1298, 1738
BssAI RCCGGY 1 cut(s) 1814
BssECI CCNNGG 4 cut(s) 30, 1952, 2250, 2398
BssNI GRCGYC 1 cut(s) 2168
BssT1I CCWWGG 3 cut(s) 30, 1952, 2398
Bst2UI CCWGG 4 cut(s) 14, 395, 935, 2251
Bst4CI ACNGT 7 cut(s) 721, 1252, 1442, 1540, 1707, 1769, 2221
Bst6I CTCTTC 2 cut(s) 474, 955
BstACI GRCGYC 1 cut(s) 2168
BstAFI CTTAAG 1 cut(s) 1858
BstAPI GCANNNNNTGC 2 cut(s) 1238, 2297
BstAUI TGTACA 1 cut(s) 1245
BstC8I GCNNGC 1 cut(s) 750
BstDSI CCRYGG 1 cut(s) 30
BstF5I GGATG 8 cut(s) 75, 627, 951, 1138, 1962, 2031, 2271, 2458
BstH2I RGCGCY 2 cut(s) 1405, 2346
BstHHI GCGC 5 cut(s) 45, 225, 1404, 1666, 2345
BstMAI GTCTC 2 cut(s) 1428, 2327
BstMWI GCNNNNNNNGC 6 cut(s) 123, 788, 1238, 1943, 2297, 2441
BstNI CCWGG 4 cut(s) 14, 395, 935, 2251
BstNSI RCATGY 2 cut(s) 994, 1855
BstPAI GACNNNNGTC 2 cut(s) 62, 1296
BstSCI CCNGG 4 cut(s) 12, 393, 933, 2249
BstSFI CTRYAG 1 cut(s) 1239
BstSLI GKGCMC 2 cut(s) 1814, 2118
BstV1I GCAGC 2 cut(s) 207, 1728
BstV2I GAAGAC 2 cut(s) 724, 2357
BstX2I RGATCY 5 cut(s) 34, 688, 1561, 1582, 2047
BstYI RGATCY 5 cut(s) 34, 688, 1561, 1582, 2047
BsuRI GGCC 5 cut(s) 126, 782, 911, 1902, 2201
BtgI CCRYGG 1 cut(s) 30
BtgZI GCGATG 1 cut(s) 211
BtrI CACGTC 2 cut(s) 857, 2056
BtsCI GGATG 8 cut(s) 75, 627, 951, 1138, 1962, 2031, 2271, 2458
BtsI GCAGTG 2 cut(s) 1248, 1531
BtsIMutI CAGTG 8 cut(s) 522, 983, 1248, 1248, 1363, 1531, 1536, 2107
Cac8I GCNNGC 1 cut(s) 750
CciI TCATGA 2 cut(s) 2083, 2325
CfoI GCGC 5 cut(s) 45, 225, 1404, 1666, 2345
Cfr10I RCCGGY 1 cut(s) 1814
Cfr13I GGNCC 4 cut(s) 548, 910, 1900, 2200
CseI GACGC 3 cut(s) 1979, 2157, 2351
Csp6I GTAC 7 cut(s) 1246, 1409, 1555, 1605, 1735, 2034, 2410
CviQI GTAC 7 cut(s) 1246, 1409, 1555, 1605, 1735, 2034, 2410
Eam1104I CTCTTC 2 cut(s) 474, 955
EarI CTCTTC 2 cut(s) 474, 955
Ecl136II GAGCTC 1 cut(s) 391
Eco130I CCWWGG 3 cut(s) 30, 1952, 2398
Eco147I AGGCCT 1 cut(s) 782
Eco24I GRGCYC 1 cut(s) 393
Eco32I GATATC 3 cut(s) 538, 1223, 1781
Eco47I GGWCC 1 cut(s) 548
Eco47III AGCGCT 1 cut(s) 2344
Eco53kI GAGCTC 1 cut(s) 391
Eco57I CTGAAG 2 cut(s) 831, 1898
Eco88I CYCGRG 1 cut(s) 1370
EcoICRI GAGCTC 1 cut(s) 391
EcoO109I RGGNCCY 1 cut(s) 910
EcoRI GAATTC 1 cut(s) 1624
EcoRII CCWGG 4 cut(s) 12, 393, 933, 2249
EcoRV GATATC 3 cut(s) 538, 1223, 1781
EcoT14I CCWWGG 3 cut(s) 30, 1952, 2398
EcoT22I ATGCAT 1 cut(s) 1207
EcoT38I GRGCYC 1 cut(s) 393
ErhI CCWWGG 3 cut(s) 30, 1952, 2398
FalI AAGNNNNNCTT 4 cut(s) 44, 76, 209, 241
FaqI GGGAC 4 cut(s) 561, 1304, 1457, 1934
FauNDI CATATG 2 cut(s) 1207, 2020
Fnu4HI GCNGC 3 cut(s) 221, 1717, 1748
FokI GGATG 7 cut(s) 62, 634, 958, 1145, 1969, 2038, 2258
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 3 cut(s) 221, 1717, 1748
FspBI CTAG 4 cut(s) 476, 840, 1587, 1793
GlaI GCGC 5 cut(s) 44, 224, 1403, 1665, 2344
GluI GCNGC 3 cut(s) 221, 1717, 1748
GsuI CTGGAG 2 cut(s) 416, 548
HaeII RGCGCY 2 cut(s) 1405, 2346
HaeIII GGCC 5 cut(s) 126, 782, 911, 1902, 2201
HapII CCGG 2 cut(s) 1815, 2275
HgaI GACGC 3 cut(s) 1979, 2157, 2351
HhaI GCGC 5 cut(s) 45, 225, 1404, 1666, 2345
Hin1I GRCGYC 1 cut(s) 2168
Hin6I GCGC 5 cut(s) 43, 223, 1402, 1664, 2343
HinP1I GCGC 5 cut(s) 43, 223, 1402, 1664, 2343
HincII GTYRAC 1 cut(s) 2217
HindII GTYRAC 1 cut(s) 2217
HinfI GANTC 7 cut(s) 86, 512, 763, 892, 1063, 1142, 2066
HpaII CCGG 2 cut(s) 1815, 2275
HphI GGTGA 7 cut(s) 86, 202, 335, 521, 923, 1137, 2414
Hpy166II GTNNAC 6 cut(s) 490, 1246, 1248, 1812, 2116, 2217
Hpy188I TCNGA 9 cut(s) 39, 49, 542, 556, 768, 1365, 1917, 2041, 2209
Hpy8I GTNNAC 6 cut(s) 490, 1246, 1248, 1812, 2116, 2217
Hpy99I CGWCG 1 cut(s) 86
HpyAV CCTTC 6 cut(s) 70, 1025, 2186, 2249, 2323, 2440
HpyCH4III ACNGT 7 cut(s) 721, 1252, 1442, 1540, 1707, 1769, 2221
HpyCH4IV ACGT 4 cut(s) 271, 856, 1081, 2055
HpyF10VI GCNNNNNNNGC 6 cut(s) 123, 788, 1238, 1943, 2297, 2441
HpySE526I ACGT 4 cut(s) 271, 856, 1081, 2055
Hsp92I GRCGYC 1 cut(s) 2168
HspAI GCGC 5 cut(s) 43, 223, 1402, 1664, 2343
KpnI GGTACC 2 cut(s) 1738, 2037
LmnI GCTCC 5 cut(s) 50, 396, 529, 1322, 1374
Lsp1109I GCAGC 2 cut(s) 207, 1728
MaeI CTAG 4 cut(s) 476, 840, 1587, 1793
MaeII ACGT 4 cut(s) 271, 856, 1081, 2055
MaeIII GTNAC 5 cut(s) 140, 457, 1006, 1691, 1926
MfeI CAATTG 1 cut(s) 1722
MflI RGATCY 5 cut(s) 34, 688, 1561, 1582, 2047
MhlI GDGCHC 5 cut(s) 330, 393, 1363, 1814, 2118
MlyI GAGTC 1 cut(s) 95
MmeI TCCRAC 3 cut(s) 279, 1006, 1889
Mph1103I ATGCAT 1 cut(s) 1207
MroXI GAANNNNTTC 1 cut(s) 369
MslI CAYNNNNRTG 1 cut(s) 333
MspCI CTTAAG 1 cut(s) 1858
MspI CCGG 2 cut(s) 1815, 2275
MspR9I CCNGG 4 cut(s) 14, 395, 935, 2251
MunI CAATTG 1 cut(s) 1722
MvaI CCWGG 4 cut(s) 14, 395, 935, 2251
MwoI GCNNNNNNNGC 6 cut(s) 123, 788, 1238, 1943, 2297, 2441
NcoI CCATGG 1 cut(s) 30
NdeI CATATG 2 cut(s) 1207, 2020
NlaIV GGNNCC 6 cut(s) 549, 690, 1584, 1736, 1901, 2035
NmeAIII GCCGAG 2 cut(s) 93, 102
NmuCI GTSAC 2 cut(s) 140, 457
NsiI ATGCAT 1 cut(s) 1207
NspI RCATGY 2 cut(s) 994, 1855
PagI TCATGA 2 cut(s) 2083, 2325
PceI AGGCCT 1 cut(s) 782
PciI ACATGT 2 cut(s) 990, 1851
PdmI GAANNNNTTC 1 cut(s) 369
PfeI GAWTC 6 cut(s) 512, 763, 892, 1063, 1142, 2066
PfoI TCCNGGA 2 cut(s) 12, 393
PkrI GCNGC 3 cut(s) 222, 1718, 1749
PleI GAGTC 1 cut(s) 94
PpsI GAGTC 1 cut(s) 94
PscI ACATGT 2 cut(s) 990, 1851
PshAI GACNNNNGTC 2 cut(s) 62, 1296
Psp124BI GAGCTC 1 cut(s) 393
Psp6I CCWGG 4 cut(s) 12, 393, 933, 2249
PspGI CCWGG 4 cut(s) 12, 393, 933, 2249
PspN4I GGNNCC 6 cut(s) 549, 690, 1584, 1736, 1901, 2035
PspPI GGNCC 4 cut(s) 548, 910, 1900, 2200
PstI CTGCAG 1 cut(s) 1243
PsuI RGATCY 5 cut(s) 34, 688, 1561, 1582, 2047
RsaI GTAC 7 cut(s) 1247, 1410, 1556, 1606, 1736, 2035, 2411
RsaNI GTAC 7 cut(s) 1246, 1409, 1555, 1605, 1735, 2034, 2410
RseI CAYNNNNRTG 1 cut(s) 333
SacI GAGCTC 1 cut(s) 393
SatI GCNGC 3 cut(s) 221, 1717, 1748
Sau96I GGNCC 4 cut(s) 548, 910, 1900, 2200
SchI GAGTC 1 cut(s) 95
ScrFI CCNGG 4 cut(s) 14, 395, 935, 2251
SduI GDGCHC 5 cut(s) 330, 393, 1363, 1814, 2118
SfcI CTRYAG 1 cut(s) 1239
SinI GGWCC 1 cut(s) 548
SmiMI CAYNNNNRTG 1 cut(s) 333
SmlI CTYRAG 1 cut(s) 1858
SmoI CTYRAG 1 cut(s) 1858
SseBI AGGCCT 1 cut(s) 782
SsiI CCGC 2 cut(s) 97, 1748
SspI AATATT 1 cut(s) 1119
SspMI CTAG 4 cut(s) 476, 840, 1587, 1793
SstI GAGCTC 1 cut(s) 393
StuI AGGCCT 1 cut(s) 782
StyD4I CCNGG 4 cut(s) 12, 393, 933, 2249
StyI CCWWGG 3 cut(s) 30, 1952, 2398
TaaI ACNGT 7 cut(s) 721, 1252, 1442, 1540, 1707, 1769, 2221
TaiI ACGT 4 cut(s) 274, 859, 1084, 2058
TaqI TCGA 3 cut(s) 84, 373, 2179
TatI WGTACW 3 cut(s) 1245, 1408, 1554
TauI GCSGC 1 cut(s) 1750
TfiI GAWTC 6 cut(s) 512, 763, 892, 1063, 1142, 2066
TscAI CASTG 8 cut(s) 522, 990, 1248, 1255, 1363, 1531, 1543, 2107
TseFI GTSAC 2 cut(s) 140, 457
TseI GCWGC 2 cut(s) 220, 1716
Tsp45I GTSAC 2 cut(s) 140, 457
TspGWI ACGGA 1 cut(s) 128
TspRI CASTG 8 cut(s) 522, 990, 1248, 1255, 1363, 1531, 1543, 2107
Vha464I CTTAAG 1 cut(s) 1858
VneI GTGCAC 2 cut(s) 1810, 2114
VpaK11BI GGWCC 1 cut(s) 548
XapI RAATTY 4 cut(s) 571, 771, 1624, 2378
XceI RCATGY 2 cut(s) 994, 1855
XmnI GAANNNNTTC 1 cut(s) 369
XspI CTAG 4 cut(s) 476, 840, 1587, 1793
Zsp2I ATGCAT 1 cut(s) 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.