Rorug05G0555000

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0020671
Physical Location & Seq
Forward (+)
74316470 .. 74318344
1875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0555000.1

Sequence Viewer

Length: 1875 bp
ATGCTTCCAACACTCTGCCTCCATCTTCCTCCGAACCACACAGGATCCCCAACTTCACAAAACGTCACACCCCATCATCATCTTCTGCACAGCTTCACCTCCCCATTTGAGCTCAAACAACTCCATGCCCACCTCATCAAAACCAACACTCCCCTCTCCACCCTCCCTCCCACCCGAATCGCCTTCACTTGCGCTCTCACTCCCAGCTTCTCCTACGCCCAGAAACTCTTCCAACACCTCGACTACCCCGATATCCCTGCCTGGAATTCCTGCCTGAAGGCCTTCGCCGAAGGCGACGAACCCATTGATGCAATGCTGCTCTTCCATCAGCTGCATTGCTTCAATGTGATTCCTGACAGTTTCACTCTGTCTTTTGTTCTAAAGGCCTGTACCCGCTTGTTGGATTTTCACACTGGTAGAGTTCTTCATGGCTATGTGGAGAAGCTTGGGTTTCGGTCCAATCTGTTTTTGATGAATATGATTCTGAGTTTGTATGCGTTGTGTGGGGAAATTAGGGGTGCACGGCTGATGTTTGATAAAATGCCGCAGAGGGATGTTGTCACGTGGAATATAATGATGACTCTGTTGGTGAAGAGAGGTGATATAGAGCAAGCTTATGATTTGTTTTCGGGGATGCCGGATAGAAGCGTGAGGTCATGGACGCTGATGATTTCGGGGTTTGGTCAGTGCGGTAAGCCTAAGGAGGCGGTTCGTGTGTTTTTGGAGATGGAGGAGGCTGGTGTGAGGGCAAATGAGGTGACTGTAGTGGCGGTTCTTGCGGCTTGTGCTGATTTGGGTGACTTGGATTTGGGTAGGAGAGTTCATGAGTACTCGAGCCAAAGTGGGTTTGGAAGAAATGTTTGGATTTCTAACACGCTGATCGAGATGTATGTCAAATGTGGGTGTTTGGAGGATGCTTGTAGAGTTTTTTATGCGATGGAAGAACGAACGGTTGTGTCGTGGTCAGCTATGATTTCAGGGCTGGCCATGCATGGACAAGCTGAGGAAGCTTTGAGACTTTTCTCTAACATGATTCAGATAGGGATGGAGCCAAATTATGTAACTTTTGTTGGACTCCTGCATGCTTGTAGCCACATGGGGTTTGTGGACAAGGGTCGTGAGTTCTTCGCCAGAATGACTGCAGATTATGGTATAGTTCCAAAAATTGAGCATTATGGTTGTATGGTTGATCTTTTAAGCCGCGCAGGGCTCCTTCAAGAGGCTTACGAGTTTATCATGAACATGCCTATCAAACCGAACGGTGTTGTGTGGGGAGCTCTCCTTGGTGGATGCAAAGTTCACAGAAACATTGAACTGGCTGAAGAAGCAACAAAGCACCTTTCTGAACTGGATCCACTGAATGATGGATACTACATTGTTTTGTCAAACATTTATGCAGAAGCACAACGGTGGGAAGACGTGGCGAGAGTGAGAAAACTAATGAGGGATCGAGGGGTGAAGAAGACACCTGGCTGGAGCTCAATCACGGTAGATGGAGTGCTTCATGAGTTTGTTGCTGGGGATGAAGCCCATCCTCAAGCCGAGGAGATCGACCAAATGTGGGAGAAACTACTTGAAAGAATGAAGATGAAGGGTTATGTACCCAACACTTCAGTTGTTCTACTAGACATGGAAGAGGATCAAAAGGAGAAATTTCTCAATCGCCATAGCGAGAAATTAGCGCTGGTTTTTGGGCTGATCAAAACGAAACCTGGAACACCAATTCGAATTATGAAGAATCTTCGTGTTTGTGAGGACTGTCATGCTGCTTTGAAACTTGTATCAGAAATTGCCGACAGAGAGATAGTTGTGCGTGACCGAAATCGGTTCCATTGTTTCAAAAAAGGTTATTGTTCCTGCAGGGATTACTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

624

Amino Acids

70.86

Weight (kDa)

6.5

Isoelectric Point (pI)

40.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 184 - 217 8.7e-08 PPR repeat family
PPR_2 PF13041 216 - 263 1.3e-08 PPR repeat family
PPR PF01535 219 - 248 3.3e-08 PPR repeat
PPR_2 PF13041 317 - 364 2.1e-10 PPR repeat family
PPR PF01535 319 - 348 5.6e-07 PPR repeat
E_motif PF20431 434 - 495 2.1e-22 E motif
DYW_deaminase PF14432 532 - 624 2.5e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020671)

Species Orthologous Gene IDs
rosa_laevigata RLG00000018818
rosa_multiflora Rmu_sc0002091.1_g000003
rosa_roxburghii Rroxscaffold_2G00123750
rosa_rugosa Rorug05G0555000
rosa_samantha Rh2AG039300 Rh2CG318600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1203
AciI CCGC 7 cut(s) 394, 545, 690, 707, 770, 779, 1201
AclWI GGATC 6 cut(s) 39, 52, 1346, 1359, 1455, 1647
AcoI YGGCCR 1 cut(s) 984
AcsI RAATTY 2 cut(s) 265, 1652
AcuI CTGAAG 3 cut(s) 296, 1341, 1596
AcvI CACGTG 1 cut(s) 564
AfaI GTAC 3 cut(s) 391, 830, 1602
AfeI AGCGCT 1 cut(s) 1683
AfiI CCNNNNNNNGG 3 cut(s) 400, 1219, 1561
AgsI TTSAA 6 cut(s) 343, 1217, 1313, 1577, 1774, 1840
AjiI CACGTC 1 cut(s) 1420
AjnI CCWGG 3 cut(s) 260, 1468, 1711
AjuI GAANNNNNNNTTGG 2 cut(s) 844, 876
AleI CACNNNNGTG 1 cut(s) 1408
AloI GAACNNNNNNTCC 2 cut(s) 1281, 1313
Alw21I GWGCWC 4 cut(s) 114, 523, 1279, 1481
Alw26I GTCTC 1 cut(s) 1009
Alw44I GTGCAC 1 cut(s) 519
AlwI GGATC 6 cut(s) 39, 52, 1346, 1359, 1455, 1647
Ama87I CYCGRG 1 cut(s) 832
Aor51HI AGCGCT 1 cut(s) 1683
AoxI GGCC 3 cut(s) 279, 384, 984
ApaLI GTGCAC 1 cut(s) 519
ApeKI GCWGC 3 cut(s) 316, 331, 1766
ApoI RAATTY 2 cut(s) 265, 1652
Asp700I GAANNNNTTC 2 cut(s) 227, 281
AspLEI GCGC 3 cut(s) 194, 1205, 1684
AspS9I GGNCC 1 cut(s) 456
AsuHPI GGTGA 6 cut(s) 88, 601, 611, 769, 809, 1468
AsuII TTCGAA 1 cut(s) 1726
AvaI CYCGRG 1 cut(s) 832
AvaII GGWCC 1 cut(s) 456
AxyI CCTNAGG 1 cut(s) 699
BaeGI GKGCMC 1 cut(s) 523
BalI TGGCCA 1 cut(s) 986
BamHI GGATCC 2 cut(s) 44, 1351
BanII GRGCYC 4 cut(s) 114, 1212, 1279, 1481
BbrPI CACGTG 1 cut(s) 564
BbsI GAAGAC 2 cut(s) 1422, 1469
Bbv12I GWGCWC 4 cut(s) 114, 523, 1279, 1481
BbvCI CCTCAGC 1 cut(s) 1002
BbvI GCAGC 3 cut(s) 303, 318, 1753
BccI CCATC 9 cut(s) 30, 81, 333, 721, 931, 1039, 1358, 1487, 1539
BceAI ACGGC 1 cut(s) 539
BcgI CGANNNNNNTGC 2 cut(s) 239, 273
BciT130I CCWGG 3 cut(s) 262, 1470, 1713
BciVI GTATCC 1 cut(s) 1361
BclI TGATCA 1 cut(s) 1698
BcoDI GTCTC 1 cut(s) 1009
BfaI CTAG 1 cut(s) 1625
BfmI CTRYAG 3 cut(s) 762, 1140, 1858
BfoI RGCGCY 1 cut(s) 1685
BfuI GTATCC 1 cut(s) 1361
BisI GCNGC 6 cut(s) 317, 332, 545, 780, 1201, 1767
BlsI GCNGC 6 cut(s) 318, 333, 546, 781, 1202, 1768
BmcAI AGTACT 1 cut(s) 830
Bme1390I CCNGG 3 cut(s) 262, 1470, 1713
Bme18I GGWCC 1 cut(s) 456
BmeT110I CYCGRG 1 cut(s) 832
BmgBI CACGTC 1 cut(s) 1420
BmgT120I GGNCC 1 cut(s) 456
BmiI GGNNCC 5 cut(s) 46, 1050, 1211, 1353, 1829
BmrFI CCNGG 3 cut(s) 262, 1470, 1713
BmsI GCATC 4 cut(s) 298, 624, 904, 1280
BoxI GACNNNNGTC 1 cut(s) 1113
BpiI GAAGAC 2 cut(s) 1422, 1469
BpmI CTGGAG 1 cut(s) 1495
Bpu10I CCTNAGC 1 cut(s) 1002
Bpu14I TTCGAA 1 cut(s) 1726
BpuEI CTTGAG 1 cut(s) 1521
BsaAI YACGTR 1 cut(s) 564
BsaJI CCNNGG 2 cut(s) 1282, 1542
BsaXI ACNNNNNCTCC 5 cut(s) 33, 133, 151, 163, 181
Bsc4I CCNNNNNNNGG 3 cut(s) 400, 1219, 1561
Bse1I ACTGG 4 cut(s) 418, 1320, 1353, 1874
Bse21I CCTNAGG 1 cut(s) 699
Bse3DI GCAATG 2 cut(s) 318, 334
BseBI CCWGG 3 cut(s) 262, 1470, 1713
BseDI CCNNGG 2 cut(s) 1282, 1542
BseGI GGATG 7 cut(s) 559, 639, 919, 1050, 1295, 1528, 1531
BseLI CCNNNNNNNGG 3 cut(s) 400, 1219, 1561
BseMI GCAATG 2 cut(s) 318, 334
BseMII CTCAG 2 cut(s) 476, 993
BseNI ACTGG 4 cut(s) 418, 1320, 1353, 1874
BseRI GAGGAG 2 cut(s) 746, 1559
BseSI GKGCMC 1 cut(s) 523
BseXI GCAGC 3 cut(s) 303, 318, 1753
BseYI CCCAGC 2 cut(s) 203, 1517
BsgI GTGCAG 1 cut(s) 71
Bsh1236I CGCG 1 cut(s) 1203
BshFI GGCC 3 cut(s) 281, 386, 986
BsiHKAI GWGCWC 4 cut(s) 114, 523, 1279, 1481
BsiHKCI CYCGRG 1 cut(s) 832
BsiSI CCGG 1 cut(s) 638
BslI CCNNNNNNNGG 3 cut(s) 400, 1219, 1561
BsmAI GTCTC 1 cut(s) 1009
BsnI GGCC 3 cut(s) 281, 386, 986
BsoBI CYCGRG 1 cut(s) 832
Bsp119I TTCGAA 1 cut(s) 1726
Bsp1286I GDGCHC 5 cut(s) 114, 523, 1212, 1279, 1481
Bsp143I GATC 8 cut(s) 44, 879, 1189, 1351, 1447, 1548, 1639, 1698
BspACI CCGC 7 cut(s) 394, 545, 690, 707, 770, 779, 1201
BspANI GGCC 3 cut(s) 281, 386, 986
BspCNI CTCAG 2 cut(s) 477, 994
BspFNI CGCG 1 cut(s) 1203
BspHI TCATGA 3 cut(s) 823, 1236, 1504
BspLI GGNNCC 5 cut(s) 46, 1050, 1211, 1353, 1829
BspMAI CTGCAG 2 cut(s) 1144, 1862
BspPI GGATC 6 cut(s) 39, 52, 1346, 1359, 1455, 1647
BspQI GCTCTTC 1 cut(s) 326
BspT104I TTCGAA 1 cut(s) 1726
BsrDI GCAATG 2 cut(s) 318, 334
BsrI ACTGG 4 cut(s) 418, 1320, 1353, 1874
BssECI CCNNGG 2 cut(s) 1282, 1542
BssMI GATC 8 cut(s) 44, 879, 1189, 1351, 1447, 1548, 1639, 1698
BssT1I CCWWGG 1 cut(s) 1282
Bst2UI CCWGG 3 cut(s) 262, 1470, 1713
Bst4CI ACNGT 7 cut(s) 359, 763, 952, 1262, 1410, 1489, 1760
Bst6I CTCTTC 4 cut(s) 233, 326, 587, 1629
BstBAI YACGTR 1 cut(s) 564
BstBI TTCGAA 1 cut(s) 1726
BstC8I GCNNGC 3 cut(s) 612, 984, 1083
BstDEI CTNAG 3 cut(s) 485, 699, 1002
BstENI CCTNNNNNAGG 1 cut(s) 1217
BstF5I GGATG 7 cut(s) 559, 639, 919, 1050, 1295, 1528, 1531
BstFNI CGCG 1 cut(s) 1203
BstH2I RGCGCY 1 cut(s) 1685
BstHHI GCGC 3 cut(s) 194, 1205, 1684
BstKTI GATC 8 cut(s) 47, 882, 1192, 1354, 1450, 1551, 1642, 1701
BstMAI GTCTC 1 cut(s) 1009
BstMBI GATC 8 cut(s) 44, 879, 1189, 1351, 1447, 1548, 1639, 1698
BstMWI GCNNNNNNNGC 5 cut(s) 776, 785, 988, 1007, 1325
BstNI CCWGG 3 cut(s) 262, 1470, 1713
BstNSI RCATGY 2 cut(s) 1085, 1246
BstPAI GACNNNNGTC 1 cut(s) 1113
BstSCI CCNGG 3 cut(s) 260, 1468, 1711
BstSFI CTRYAG 3 cut(s) 762, 1140, 1858
BstSLI GKGCMC 1 cut(s) 523
BstUI CGCG 1 cut(s) 1203
BstV1I GCAGC 3 cut(s) 303, 318, 1753
BstV2I GAAGAC 2 cut(s) 1422, 1469
BstX2I RGATCY 2 cut(s) 44, 1351
BstYI RGATCY 2 cut(s) 44, 1351
Bsu36I CCTNAGG 1 cut(s) 699
BsuI GTATCC 1 cut(s) 1361
BsuRI GGCC 3 cut(s) 281, 386, 986
BtgZI GCGATG 1 cut(s) 950
BtrI CACGTC 1 cut(s) 1420
BtsCI GGATG 7 cut(s) 559, 639, 919, 1050, 1295, 1528, 1531
BtsIMutI CAGTG 3 cut(s) 411, 692, 1355
Cac8I GCNNGC 3 cut(s) 612, 984, 1083
CciI TCATGA 3 cut(s) 823, 1236, 1504
CfoI GCGC 3 cut(s) 194, 1205, 1684
Cfr13I GGNCC 1 cut(s) 456
CseI GACGC 1 cut(s) 670
Csp6I GTAC 3 cut(s) 390, 829, 1601
CviQI GTAC 3 cut(s) 390, 829, 1601
DdeI CTNAG 3 cut(s) 485, 699, 1002
DpnI GATC 8 cut(s) 46, 881, 1191, 1353, 1449, 1550, 1641, 1700
DpnII GATC 8 cut(s) 44, 879, 1189, 1351, 1447, 1548, 1639, 1698
EaeI YGGCCR 1 cut(s) 984
Eam1104I CTCTTC 4 cut(s) 233, 326, 587, 1629
EarI CTCTTC 4 cut(s) 233, 326, 587, 1629
Ecl136II GAGCTC 3 cut(s) 112, 1277, 1479
Eco130I CCWWGG 1 cut(s) 1282
Eco147I AGGCCT 2 cut(s) 281, 386
Eco24I GRGCYC 4 cut(s) 114, 1212, 1279, 1481
Eco32I GATATC 1 cut(s) 253
Eco47I GGWCC 1 cut(s) 456
Eco47III AGCGCT 1 cut(s) 1683
Eco53kI GAGCTC 3 cut(s) 112, 1277, 1479
Eco57I CTGAAG 3 cut(s) 296, 1341, 1596
Eco72I CACGTG 1 cut(s) 564
Eco81I CCTNAGG 1 cut(s) 699
Eco88I CYCGRG 1 cut(s) 832
EcoICRI GAGCTC 3 cut(s) 112, 1277, 1479
EcoNI CCTNNNNNAGG 1 cut(s) 1217
EcoRI GAATTC 1 cut(s) 265
EcoRII CCWGG 3 cut(s) 260, 1468, 1711
EcoRV GATATC 1 cut(s) 253
EcoT14I CCWWGG 1 cut(s) 1282
EcoT22I ATGCAT 1 cut(s) 993
EcoT38I GRGCYC 4 cut(s) 114, 1212, 1279, 1481
ErhI CCWWGG 1 cut(s) 1282
FauI CCCGC 1 cut(s) 401
FbaI TGATCA 1 cut(s) 1698
Fnu4HI GCNGC 6 cut(s) 317, 332, 545, 780, 1201, 1767
FokI GGATG 7 cut(s) 566, 646, 926, 1057, 1302, 1518, 1535
FriOI GRGCYC 4 cut(s) 114, 1212, 1279, 1481
Fsp4HI GCNGC 6 cut(s) 317, 332, 545, 780, 1201, 1767
FspBI CTAG 1 cut(s) 1625
GlaI GCGC 3 cut(s) 193, 1204, 1683
GluI GCNGC 6 cut(s) 317, 332, 545, 780, 1201, 1767
GsaI CCCAGC 2 cut(s) 207, 1521
GsuI CTGGAG 1 cut(s) 1495
HaeII RGCGCY 1 cut(s) 1685
HaeIII GGCC 3 cut(s) 281, 386, 986
HapII CCGG 1 cut(s) 638
HgaI GACGC 1 cut(s) 670
HhaI GCGC 3 cut(s) 194, 1205, 1684
Hin6I GCGC 3 cut(s) 192, 1203, 1682
HinP1I GCGC 3 cut(s) 192, 1203, 1682
HindIII AAGCTT 3 cut(s) 443, 612, 1008
HinfI GANTC 7 cut(s) 177, 349, 481, 580, 1033, 1074, 1738
HpaII CCGG 1 cut(s) 638
HphI GGTGA 6 cut(s) 88, 601, 611, 769, 809, 1468
Hpy166II GTNNAC 3 cut(s) 521, 1108, 1300
Hpy188I TCNGA 5 cut(s) 33, 486, 1038, 1345, 1786
Hpy188III TCNNGA 7 cut(s) 353, 824, 883, 1118, 1217, 1237, 1505
Hpy8I GTNNAC 3 cut(s) 521, 1108, 1300
Hpy99I CGWCG 1 cut(s) 299
HpyAV CCTTC 6 cut(s) 193, 271, 284, 292, 1223, 1585
HpyCH4III ACNGT 7 cut(s) 359, 763, 952, 1262, 1410, 1489, 1760
HpyCH4IV ACGT 3 cut(s) 63, 563, 1419
HpyF10VI GCNNNNNNNGC 5 cut(s) 776, 785, 988, 1007, 1325
HpyF3I CTNAG 3 cut(s) 485, 699, 1002
HpySE526I ACGT 3 cut(s) 63, 563, 1419
HspAI GCGC 3 cut(s) 192, 1203, 1682
Ksp22I TGATCA 1 cut(s) 1698
Kzo9I GATC 8 cut(s) 44, 879, 1189, 1351, 1447, 1548, 1639, 1698
LguI GCTCTTC 1 cut(s) 326
LmnI GCTCC 4 cut(s) 1048, 1215, 1274, 1476
Lsp1109I GCAGC 3 cut(s) 303, 318, 1753
LweI GCATC 4 cut(s) 298, 624, 904, 1280
MaeI CTAG 1 cut(s) 1625
MaeII ACGT 3 cut(s) 63, 563, 1419
MaeIII GTNAC 6 cut(s) 64, 559, 757, 797, 1060, 1814
MalI GATC 8 cut(s) 46, 881, 1191, 1353, 1449, 1550, 1641, 1700
MboI GATC 8 cut(s) 44, 879, 1189, 1351, 1447, 1548, 1639, 1698
MflI RGATCY 2 cut(s) 44, 1351
MhlI GDGCHC 5 cut(s) 114, 523, 1212, 1279, 1481
MlsI TGGCCA 1 cut(s) 986
MluCI AATT 9 cut(s) 265, 510, 1054, 1164, 1652, 1676, 1722, 1728, 1788
MluNI TGGCCA 1 cut(s) 986
MlyI GAGTC 2 cut(s) 574, 1068
MmeI TCCRAC 4 cut(s) 32, 256, 381, 1051
Mox20I TGGCCA 1 cut(s) 986
Mph1103I ATGCAT 1 cut(s) 993
MroXI GAANNNNTTC 2 cut(s) 227, 281
MscI TGGCCA 1 cut(s) 986
MseI TTAA 1 cut(s) 1196
MslI CAYNNNNRTG 3 cut(s) 432, 1241, 1408
Msp20I TGGCCA 1 cut(s) 986
MspA1I CMGCKG 1 cut(s) 331
MspI CCGG 1 cut(s) 638
MspR9I CCNGG 3 cut(s) 262, 1470, 1713
MvaI CCWGG 3 cut(s) 262, 1470, 1713
MvnI CGCG 1 cut(s) 1203
MwoI GCNNNNNNNGC 5 cut(s) 776, 785, 988, 1007, 1325
NdeII GATC 8 cut(s) 44, 879, 1189, 1351, 1447, 1548, 1639, 1698
NlaIV GGNNCC 5 cut(s) 46, 1050, 1211, 1353, 1829
NmeAIII GCCGAG 1 cut(s) 1567
NmuCI GTSAC 5 cut(s) 64, 559, 757, 797, 1814
NsiI ATGCAT 1 cut(s) 993
NspI RCATGY 2 cut(s) 1085, 1246
NspV TTCGAA 1 cut(s) 1726
OliI CACNNNNGTG 1 cut(s) 1408
PaeI GCATGC 1 cut(s) 1085
PaeR7I CTCGAG 1 cut(s) 832
PagI TCATGA 3 cut(s) 823, 1236, 1504
PceI AGGCCT 2 cut(s) 281, 386
PciSI GCTCTTC 1 cut(s) 326
PcsI WCGNNNNNNNCGW 3 cut(s) 246, 291, 956
PdmI GAANNNNTTC 2 cut(s) 227, 281
PfeI GAWTC 5 cut(s) 177, 349, 481, 1033, 1738
PkrI GCNGC 6 cut(s) 318, 333, 546, 781, 1202, 1768
PleI GAGTC 2 cut(s) 574, 1068
PmaCI CACGTG 1 cut(s) 564
PmlI CACGTG 1 cut(s) 564
PpsI GAGTC 2 cut(s) 574, 1068
Ppu21I YACGTR 1 cut(s) 564
PshAI GACNNNNGTC 1 cut(s) 1113
Psp124BI GAGCTC 3 cut(s) 114, 1279, 1481
Psp6I CCWGG 3 cut(s) 260, 1468, 1711
PspCI CACGTG 1 cut(s) 564
PspFI CCCAGC 2 cut(s) 203, 1517
PspGI CCWGG 3 cut(s) 260, 1468, 1711
PspN4I GGNNCC 5 cut(s) 46, 1050, 1211, 1353, 1829
PspPI GGNCC 1 cut(s) 456
PspXI VCTCGAGB 1 cut(s) 832
PsrI GAACNNNNNNTAC 2 cut(s) 756, 788
PstI CTGCAG 2 cut(s) 1144, 1862
PsuI RGATCY 2 cut(s) 44, 1351
PvuII CAGCTG 1 cut(s) 331
RsaI GTAC 3 cut(s) 391, 830, 1602
RsaNI GTAC 3 cut(s) 390, 829, 1601
RseI CAYNNNNRTG 3 cut(s) 432, 1241, 1408
SacI GAGCTC 3 cut(s) 114, 1279, 1481
SapI GCTCTTC 1 cut(s) 326
SaqAI TTAA 1 cut(s) 1196
SatI GCNGC 6 cut(s) 317, 332, 545, 780, 1201, 1767
Sau3AI GATC 8 cut(s) 44, 879, 1189, 1351, 1447, 1548, 1639, 1698
Sau96I GGNCC 1 cut(s) 456
SbfI CCTGCAGG 1 cut(s) 1862
ScaI AGTACT 1 cut(s) 830
SchI GAGTC 2 cut(s) 574, 1068
ScrFI CCNGG 3 cut(s) 262, 1470, 1713
SdaI CCTGCAGG 1 cut(s) 1862
SduI GDGCHC 5 cut(s) 114, 523, 1212, 1279, 1481
SfaNI GCATC 4 cut(s) 298, 624, 904, 1280
SfcI CTRYAG 3 cut(s) 762, 1140, 1858
Sfr274I CTCGAG 1 cut(s) 832
SfuI TTCGAA 1 cut(s) 1726
SinI GGWCC 1 cut(s) 456
SlaI CTCGAG 1 cut(s) 832
SmiMI CAYNNNNRTG 3 cut(s) 432, 1241, 1408
SmlI CTYRAG 2 cut(s) 832, 1536
SmoI CTYRAG 2 cut(s) 832, 1536
SphI GCATGC 1 cut(s) 1085
Sse8387I CCTGCAGG 1 cut(s) 1862
Sse9I AATT 9 cut(s) 265, 510, 1054, 1164, 1652, 1676, 1722, 1728, 1788
SseBI AGGCCT 2 cut(s) 281, 386
SsiI CCGC 7 cut(s) 394, 545, 690, 707, 770, 779, 1201
SspMI CTAG 1 cut(s) 1625
SstI GAGCTC 3 cut(s) 114, 1279, 1481
StuI AGGCCT 2 cut(s) 281, 386
StyD4I CCNGG 3 cut(s) 260, 1468, 1711
StyI CCWWGG 1 cut(s) 1282
TaaI ACNGT 7 cut(s) 359, 763, 952, 1262, 1410, 1489, 1760
TaiI ACGT 3 cut(s) 66, 566, 1422
TaqI TCGA 6 cut(s) 240, 833, 882, 1450, 1551, 1726
TaqII GACCGA 2 cut(s) 444, 1833
TasI AATT 9 cut(s) 265, 510, 1054, 1164, 1652, 1676, 1722, 1728, 1788
TatI WGTACW 1 cut(s) 828
TauI GCSGC 3 cut(s) 547, 782, 1203
TfiI GAWTC 5 cut(s) 177, 349, 481, 1033, 1738
Tru1I TTAA 1 cut(s) 1196
Tru9I TTAA 1 cut(s) 1196
TscAI CASTG 3 cut(s) 418, 692, 1362
TseFI GTSAC 5 cut(s) 64, 559, 757, 797, 1814
TseI GCWGC 3 cut(s) 316, 331, 1766
Tsp45I GTSAC 5 cut(s) 64, 559, 757, 797, 1814
TspDTI ATGAA 9 cut(s) 416, 488, 812, 1253, 1493, 1539, 1598, 1604, 1748
TspRI CASTG 3 cut(s) 418, 692, 1362
VneI GTGCAC 1 cut(s) 519
VpaK11BI GGWCC 1 cut(s) 456
XagI CCTNNNNNAGG 1 cut(s) 1217
XapI RAATTY 2 cut(s) 265, 1652
XceI RCATGY 2 cut(s) 1085, 1246
XcmI CCANNNNNNNNNTGG 1 cut(s) 845
XhoI CTCGAG 1 cut(s) 832
XmnI GAANNNNTTC 2 cut(s) 227, 281
XspI CTAG 1 cut(s) 1625
ZrmI AGTACT 1 cut(s) 830
Zsp2I ATGCAT 1 cut(s) 993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.