Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0017094

Physical Location & Seq

Genomic Coordinates Forward (+)

59734492 .. 59736744

Gene Structure 2253 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0474600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGCTACTACAAATCAACAATGCAGTGTCAAATGCTGAGGAATACCAGACATATATCATCCACATGGACCATTCCCAAAAACCTGCATCTTTCTTAACACATGAGGCATGGCATCGGTCCACCATAACATCATTAATGCGATCATCTCCTGAAGAACATGATGAGAGCGAAATGTTCTTGTACTCATACAACCATGTCATGCACGGCTTCAGTGCAAGGCTCACAGCAACTCAGCTGTTGGAATTGGAGAAATCTCCAGCTCATGTTGCCACACACCCGCAGTTATTTCTTGAGCCGCTCACAACACACAGCCCCAAGTTTCTTGGACTGAAACAGAACTCTGGCATATGGCCAGCTGCGTCCTTTGGCAAAGACGTGATTATAGGTATTATCGATACTGGAATTTGGCCAGAGAGTGAGAGCTTCAATGATAAAGGAATGGCAGAAGTTCCACAGAGATGGAAAGGCACATGTGAAAATGGAACGTCATTTAGCCCATCTCTCTGCAACAGGAAGCTCATAGGGGCACGTTCTTTTAGCAAAGGGCTCCAAGCTGAAGGCCTAAAAATCCCACCATTTGACTATAATTCACCAAGAGACCACAGTGGTCATGGAACCCACACATCATCAACTGCTGCAGGTAACCATGTAGTCGGTGCAAGTCAATTTGGCTATGCAAAAGGCACGGCAAGAGGTGTGGCGCCGCGTGCACATGTTGCCATGTACAAGGTGCTCTGGGGAGTAGAAACAGAAAAGAGTACAGCTACTGATGTGCTAGCTGCCATGGACCAGGCAATTTCCGACGGAGTTGATATCATATCAATATCTCTTCGCATAAGCCTGCGGGAAGATCCTCCTTATTTCAATAACGTCATTTCCATTGCTTCTCTTTCAGCAGCTGAGAAAGGAATTGTTGTTGTCTGTGCCGCTGGGAATCAGGGTGCTCCGAACTCAATATACAATGGAGCACCCTGGATCACAACAGTAGGAGCTGGCACACTCGATCGTAGTTTCACTGCAACAATGACTCTAGAAAATGGGTTAACAGTTGAAGGAACATCATACTTCCCAGAGAGCGTTTACATTACTGATGCACCATTATACTCTGGGAAAGAGAATGTGAGCAAAGCAATGTGCTACTATGGGGGATTGGATCATAAAGAAGTTGCTGGAAAGGTAGTCTTATGTGATAATCCCGCCGAGAGCCAGATAGACATTGAAGGACAAAAGGAAGAGGTAGAGAGGGCAGGTGCTTATGCTGGAATCTTCATCACGGATCTCTCATTTTTACATCCATCCGACTACACCGTTCCTGCTATGATTCTGCCATTTTCTACAGGTGCCTTGGTTAGAGGTCACGCCACACAGGTCGATACAACCAAAGTTAAGAGCATCACATTTGTTCACACCAACTTGGGAACAAAACCAGCACCACAAGTGGCAAGTTTCTCTTCAAGAGGACCATACTCAATCACTCCAGGTATTCTAAAACCAGACATTCTTGCCCCAGGGGTTGATGTGCTGGCTGCAGTGAAACCAGACAAGCCATTCATGGAACTAAAGAATTACAATTTAGTGACAGATTATGCACTAAAATCAGGGACATCAATGGCAGCACCCCATGTCGCTGGCGTAGCAGCATTGTTAAAATCTGTCCACCCAGAATGGAGCCCAGCAGCCATCCGATCAGCAATCATGACCACAGCATACGCAGTCGACAACAATCACACCACCATAAAAGACGAATCAGATGGTCTTCCAGCCACACCATTGGACTTTGGGGCAGGCCACATAAACCCAAATAAGGCCATGAACCCCGGACTAGTCTATGACATGAATGTGCAAGACTACATTGAGTTTCTATGTACCCTGGGGTACAATGACAAGCAGATGAAAGCCGTTATTAGACGAAGCCAATGGACTTGCAGACAGCCCCCTACTGAATTAAACTACCCTTCTTACATGGTCATCATTAACGGCACAGACTCTCCGAGAACCAAAAGCTTTAGCAGGGTTGTGACAAACGTGGGAGATGACACGTCAATTTACCGAGCAATTCTACAAGTTCCTAGTGGGATGAGGATAACAGTAGAGCCTAGTACTCTGACATTCACTAAAAAGTATCAGCAGCAAGGTTTTGTTTTGAACGTAGAGATCGACAGTGATGCTCCGAAGGTGATCTATGGTTATCTCAAATGGGTTGATCAACATGATCACATTGTATCAAGTCCCGTAGTGGCCCTTAATAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002178 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006950 GO:0006986 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010556 GO:0012505 GO:0016020 GO:0016021 GO:0017059 GO:0019216 GO:0019222 GO:0019725 GO:0030176 GO:0031211 GO:0031224 GO:0031227 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031984 GO:0032991 GO:0033554 GO:0034248 GO:0034249 GO:0034620 GO:0035339 GO:0035966 GO:0035967 GO:0042175 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045833 GO:0046890 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051055 GO:0051171 GO:0051172 GO:0051716 GO:0055082 GO:0055088 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0080090 GO:0090153 GO:0090155 GO:0090156 GO:0098796 GO:0098827 GO:1900060 GO:1902494 GO:1905038 GO:1905961 GO:1990234 GO:2000303

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ORMDL

Protein Analysis

750

Amino Acids

81.53

Weight (kDa)

5.97

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	17 - 87	2.4e-14	Peptidase inhibitor I9
Peptidase_S8	PF00082	123 - 577	1.3e-46	Subtilase family
fn3_6	PF17766	648 - 746	2.2e-23	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017094)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42000
fragaria_vesca	FvH4_5g11390
malus_domestica	MD06G1114100.v1.1 MD14G1135400.v1.1
prunus_persica	Prupe.5G126900_v2.0.a1
pyrus_communis	pycom06g10670
rosa_chinensis	RchiOBHm_Chr7g0186481
rosa_laevigata	RLG00000004842
rosa_multiflora	Rmu_sc0000645.1_g000032
rosa_rugosa	Rorug06G0474600
rosa_samantha	Rh7BG082500
rosa_wichuraiana	Rw7G006810 Rw7G007050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1238
Acc36I	ACCTGC	3 cut(s)	91, 629, 1238
AccB1I	GGYRCC	2 cut(s)	700, 1340
AccBSI	CCGCTC	1 cut(s)	298
AccI	GTMKAC	1 cut(s)	1716
AccII	CGCG	1 cut(s)	706
AciI	CCGC	6 cut(s)	278, 296, 704, 844, 927, 1197
AclWI	GGATC	4 cut(s)	845, 983, 1161, 1284
AcoI	YGGCCR	2 cut(s)	350, 407
AcsI	RAATTY	1 cut(s)	402
AcuI	CTGAAG	3 cut(s)	171, 193, 576
AcyI	GRCGYC	1 cut(s)	701
AfaI	GTAC	6 cut(s)	182, 725, 760, 1867, 1877, 2101
AfiI	CCNNNNNNNGG	1 cut(s)	1804
AflIII	ACRYGT	3 cut(s)	470, 712, 2037
AgsI	TTSAA	6 cut(s)	427, 865, 1052, 1220, 1455, 2146
AhlI	ACTAGT	1 cut(s)	1822
AjiI	CACGTC	2 cut(s)	376, 2040
AjnI	CCWGG	5 cut(s)	789, 971, 1477, 1507, 1869
Alw21I	GWGCWC	4 cut(s)	712, 735, 946, 970
Alw26I	GTCTC	1 cut(s)	591
Alw44I	GTGCAC	1 cut(s)	708
AlwI	GGATC	4 cut(s)	845, 983, 1161, 1284
AlwNI	CAGNNNCTG	2 cut(s)	767, 899
AoxI	GGCC	6 cut(s)	350, 407, 559, 1786, 1806, 2238
ApaLI	GTGCAC	1 cut(s)	708
ApeKI	GCWGC	9 cut(s)	356, 635, 779, 896, 1526, 1613, 1637, 1676, 2128
ApoI	RAATTY	1 cut(s)	402
AseI	ATTAAT	1 cut(s)	134
AspLEI	GCGC	1 cut(s)	703
AspS9I	GGNCC	5 cut(s)	67, 117, 787, 1460, 2239
AsuC2I	CCSGG	1 cut(s)	1818
AsuHPI	GGTGA	2 cut(s)	582, 2188
AsuNHI	GCTAGC	1 cut(s)	775
AvaII	GGWCC	4 cut(s)	67, 117, 787, 1460
BaeGI	GKGCMC	2 cut(s)	529, 712
BalI	TGGCCA	2 cut(s)	352, 409
BanI	GGYRCC	2 cut(s)	700, 1340
BanII	GRGCYC	2 cut(s)	549, 1673
BbsI	GAAGAC	1 cut(s)	1748
Bbv12I	GWGCWC	4 cut(s)	712, 735, 946, 970
BbvCI	CCTCAGC	1 cut(s)	36
BbvI	GCAGC	9 cut(s)	343, 622, 766, 908, 1513, 1625, 1649, 1688, 2140
BccI	CCATC	5 cut(s)	453, 505, 1303, 1688, 1745
BceAI	ACGGC	4 cut(s)	220, 702, 1883, 1993
BcgI	CGANNNNNNTGC	2 cut(s)	2147, 2181
BciT130I	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
BclI	TGATCA	2 cut(s)	2203, 2212
BcnI	CCSGG	1 cut(s)	1818
BcoDI	GTCTC	1 cut(s)	591
BcuI	ACTAGT	1 cut(s)	1822
BfaI	CTAG	6 cut(s)	776, 1031, 1823, 2070, 2097, 2251
BfmI	CTRYAG	3 cut(s)	636, 1335, 1527
BfoI	RGCGCY	1 cut(s)	704
BfuAI	ACCTGC	3 cut(s)	91, 629, 1238
BmcAI	AGTACT	1 cut(s)	2101
Bme1390I	CCNGG	6 cut(s)	791, 973, 1479, 1509, 1818, 1871
Bme18I	GGWCC	4 cut(s)	67, 117, 787, 1460
BmgBI	CACGTC	2 cut(s)	376, 2040
BmgT120I	GGNCC	5 cut(s)	67, 117, 787, 1460, 2239
BmiI	GGNNCC	5 cut(s)	548, 616, 702, 1342, 1670
BmrFI	CCNGG	6 cut(s)	791, 973, 1479, 1509, 1818, 1871
BmsI	GCATC	5 cut(s)	95, 121, 1081, 1401, 2155
BmtI	GCTAGC	1 cut(s)	779
BpiI	GAAGAC	1 cut(s)	1748
BpmI	CTGGAG	2 cut(s)	240, 1461
Bpu10I	CCTNAGC	1 cut(s)	36
BpuEI	CTTGAG	1 cut(s)	311
BpuMI	CCSGG	1 cut(s)	1818
Bsa29I	ATCGAT	1 cut(s)	393
BsaHI	GRCGYC	1 cut(s)	701
BsaI	GGTCTC	1 cut(s)	591
BsaJI	CCNNGG	8 cut(s)	783, 971, 1344, 1507, 1508, 1816, 1869, 1870
BsaXI	ACNNNNNCTCC	2 cut(s)	1972, 2002
Bsc4I	CCNNNNNNNGG	1 cut(s)	1804
Bse1I	ACTGG	1 cut(s)	403
Bse3DI	GCAATG	2 cut(s)	879, 1137
BseBI	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
BseCI	ATCGAT	1 cut(s)	393
BseDI	CCNNGG	8 cut(s)	783, 971, 1344, 1507, 1508, 1816, 1869, 1870
BseGI	GGATG	5 cut(s)	57, 1291, 1295, 1680, 2082
BseLI	CCNNNNNNNGG	1 cut(s)	1804
BseMI	GCAATG	2 cut(s)	879, 1137
BseMII	CTCAG	3 cut(s)	27, 245, 891
BseNI	ACTGG	1 cut(s)	403
BseSI	GKGCMC	2 cut(s)	529, 712
BseXI	GCAGC	9 cut(s)	343, 622, 766, 908, 1513, 1625, 1649, 1688, 2140
BseYI	CCCAGC	2 cut(s)	929, 1672
Bsh1236I	CGCG	1 cut(s)	706
Bsh1285I	CGRYCG	1 cut(s)	1006
BshFI	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2240
BshNI	GGYRCC	2 cut(s)	700, 1340
BshVI	ATCGAT	1 cut(s)	393
BsiEI	CGRYCG	1 cut(s)	1006
BsiHKAI	GWGCWC	4 cut(s)	712, 735, 946, 970
BsiSI	CCGG	1 cut(s)	1818
BslFI	GGGAC	2 cut(s)	1615, 2214
BslI	CCNNNNNNNGG	1 cut(s)	1804
BsmAI	GTCTC	1 cut(s)	591
BsmFI	GGGAC	2 cut(s)	1615, 2214
BsnI	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2240
Bso31I	GGTCTC	1 cut(s)	591
Bsp1286I	GDGCHC	7 cut(s)	529, 549, 712, 735, 946, 970, 1673
Bsp1407I	TGTACA	1 cut(s)	723
Bsp19I	CCATGG	1 cut(s)	783
BspACI	CCGC	6 cut(s)	278, 296, 704, 844, 927, 1197
BspANI	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2240
BspCNI	CTCAG	3 cut(s)	28, 244, 892
BspDI	ATCGAT	1 cut(s)	393
BspFNI	CGCG	1 cut(s)	706
BspHI	TCATGA	1 cut(s)	1695
BspLI	GGNNCC	5 cut(s)	548, 616, 702, 1342, 1670
BspMAI	CTGCAG	2 cut(s)	640, 1531
BspMI	ACCTGC	3 cut(s)	91, 629, 1238
BspOI	GCTAGC	1 cut(s)	779
BspPI	GGATC	4 cut(s)	845, 983, 1161, 1284
BspT107I	GGYRCC	2 cut(s)	700, 1340
BspTNI	GGTCTC	1 cut(s)	591
BsrBI	CCGCTC	1 cut(s)	298
BsrDI	GCAATG	2 cut(s)	879, 1137
BsrGI	TGTACA	1 cut(s)	723
BsrI	ACTGG	1 cut(s)	403
BssECI	CCNNGG	8 cut(s)	783, 971, 1344, 1507, 1508, 1816, 1869, 1870
BssNI	GRCGYC	1 cut(s)	701
BssT1I	CCWWGG	2 cut(s)	783, 1344
Bst2UI	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
Bst4CI	ACNGT	6 cut(s)	605, 985, 1048, 1309, 2089, 2162
Bst6I	CTCTTC	3 cut(s)	834, 1227, 1456
BstACI	GRCGYC	1 cut(s)	701
BstAPI	GCANNNNNTGC	1 cut(s)	716
BstAUI	TGTACA	1 cut(s)	723
BstC8I	GCNNGC	8 cut(s)	354, 708, 777, 842, 994, 1524, 1630, 1786
BstDEI	CTNAG	3 cut(s)	36, 231, 900
BstDSI	CCRYGG	1 cut(s)	783
BstEII	GGTNACC	1 cut(s)	641
BstF5I	GGATG	5 cut(s)	57, 1291, 1295, 1680, 2082
BstFNI	CGCG	1 cut(s)	706
BstH2I	RGCGCY	1 cut(s)	704
BstHHI	GCGC	1 cut(s)	703
BstMAI	GTCTC	1 cut(s)	591
BstMCI	CGRYCG	1 cut(s)	1006
BstMWI	GCNNNNNNNGC	4 cut(s)	266, 707, 716, 1634
BstNI	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
BstNSI	RCATGY	2 cut(s)	474, 716
BstPI	GGTNACC	1 cut(s)	641
BstSCI	CCNGG	6 cut(s)	789, 971, 1477, 1507, 1816, 1869
BstSFI	CTRYAG	3 cut(s)	636, 1335, 1527
BstSLI	GKGCMC	2 cut(s)	529, 712
BstUI	CGCG	1 cut(s)	706
BstV1I	GCAGC	9 cut(s)	343, 622, 766, 908, 1513, 1625, 1649, 1688, 2140
BstV2I	GAAGAC	1 cut(s)	1748
BstX2I	RGATCY	2 cut(s)	850, 1276
BstXI	CCANNNNNNTGG	3 cut(s)	459, 1628, 1771
BstYI	RGATCY	2 cut(s)	850, 1276
Bsu15I	ATCGAT	1 cut(s)	393
BsuRI	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2240
BsuTUI	ATCGAT	1 cut(s)	393
BtgI	CCRYGG	1 cut(s)	783
BtrI	CACGTC	2 cut(s)	376, 2040
BtsCI	GGATG	5 cut(s)	57, 1291, 1295, 1680, 2082
BtsI	GCAGTG	3 cut(s)	30, 1014, 1536
BtsIMutI	CAGTG	6 cut(s)	30, 217, 610, 1014, 1536, 2167
BveI	ACCTGC	3 cut(s)	91, 629, 1238
Cac8I	GCNNGC	8 cut(s)	354, 708, 777, 842, 994, 1524, 1630, 1786
CaiI	CAGNNNCTG	2 cut(s)	767, 899
CciI	TCATGA	1 cut(s)	1695
CfoI	GCGC	1 cut(s)	703
Cfr13I	GGNCC	5 cut(s)	67, 117, 787, 1460, 2239
ClaI	ATCGAT	1 cut(s)	393
CseI	GACGC	1 cut(s)	348
Csp6I	GTAC	6 cut(s)	181, 724, 759, 1866, 1876, 2100
CspCI	CAANNNNNGTGG	2 cut(s)	678, 713
CviQI	GTAC	6 cut(s)	181, 724, 759, 1866, 1876, 2100
DdeI	CTNAG	3 cut(s)	36, 231, 900
DinI	GGCGCC	1 cut(s)	702
EaeI	YGGCCR	2 cut(s)	350, 407
Eam1104I	CTCTTC	3 cut(s)	834, 1227, 1456
EarI	CTCTTC	3 cut(s)	834, 1227, 1456
Eco130I	CCWWGG	2 cut(s)	783, 1344
Eco147I	AGGCCT	1 cut(s)	561
Eco24I	GRGCYC	2 cut(s)	549, 1673
Eco31I	GGTCTC	1 cut(s)	591
Eco32I	GATATC	1 cut(s)	814
Eco47I	GGWCC	4 cut(s)	67, 117, 787, 1460
Eco57I	CTGAAG	3 cut(s)	171, 193, 576
Eco91I	GGTNACC	1 cut(s)	641
EcoO65I	GGTNACC	1 cut(s)	641
EcoRII	CCWGG	5 cut(s)	789, 971, 1477, 1507, 1869
EcoRV	GATATC	1 cut(s)	814
EcoT14I	CCWWGG	2 cut(s)	783, 1344
EcoT38I	GRGCYC	2 cut(s)	549, 1673
EgeI	GGCGCC	1 cut(s)	702
EheI	GGCGCC	1 cut(s)	702
ErhI	CCWWGG	2 cut(s)	783, 1344
FalI	AAGNNNNNCTT	4 cut(s)	1166, 1198, 1435, 1467
FaqI	GGGAC	2 cut(s)	1615, 2214
FauI	CCCGC	3 cut(s)	285, 837, 1204
FauNDI	CATATG	1 cut(s)	347
FbaI	TGATCA	2 cut(s)	2203, 2212
FblI	GTMKAC	1 cut(s)	1716
FokI	GGATG	5 cut(s)	44, 1278, 1282, 1667, 2089
FriOI	GRGCYC	2 cut(s)	549, 1673
FspBI	CTAG	6 cut(s)	776, 1031, 1823, 2070, 2097, 2251
GlaI	GCGC	1 cut(s)	702
GsaI	CCCAGC	2 cut(s)	933, 1676
GsuI	CTGGAG	2 cut(s)	240, 1461
HaeII	RGCGCY	1 cut(s)	704
HaeIII	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2240
HapII	CCGG	1 cut(s)	1818
HgaI	GACGC	1 cut(s)	348
HhaI	GCGC	1 cut(s)	703
Hin1I	GRCGYC	1 cut(s)	701
Hin6I	GCGC	1 cut(s)	701
HinP1I	GCGC	1 cut(s)	701
HincII	GTYRAC	2 cut(s)	1044, 1717
HindII	GTYRAC	2 cut(s)	1044, 1717
HindIII	AAGCTT	1 cut(s)	2002
HinfI	GANTC	6 cut(s)	934, 1027, 1263, 1321, 1745, 1985
HpaI	GTTAAC	1 cut(s)	1044
HpaII	CCGG	1 cut(s)	1818
HphI	GGTGA	2 cut(s)	582, 2188
Hpy166II	GTNNAC	7 cut(s)	120, 710, 1044, 1081, 1405, 1657, 1717
Hpy188I	TCNGA	8 cut(s)	802, 948, 1300, 1685, 1750, 1992, 2106, 2172
Hpy188III	TCNNGA	5 cut(s)	149, 290, 1031, 1455, 1696
Hpy8I	GTNNAC	7 cut(s)	120, 710, 1044, 1081, 1405, 1657, 1717
Hpy99I	CGWCG	1 cut(s)	806
HpyAV	CCTTC	5 cut(s)	551, 1046, 1214, 1965, 2167
HpyCH4III	ACNGT	6 cut(s)	605, 985, 1048, 1309, 2089, 2162
HpyCH4IV	ACGT	7 cut(s)	375, 485, 529, 870, 2025, 2039, 2148
HpyF10VI	GCNNNNNNNGC	4 cut(s)	266, 707, 716, 1634
HpyF3I	CTNAG	3 cut(s)	36, 231, 900
HpySE526I	ACGT	7 cut(s)	375, 485, 529, 870, 2025, 2039, 2148
Hsp92I	GRCGYC	1 cut(s)	701
HspAI	GCGC	1 cut(s)	701
KasI	GGCGCC	1 cut(s)	700
Ksp22I	TGATCA	2 cut(s)	2203, 2212
KspAI	GTTAAC	1 cut(s)	1044
LmnI	GCTCC	6 cut(s)	552, 949, 965, 989, 1668, 2173
Lsp1109I	GCAGC	9 cut(s)	343, 622, 766, 908, 1513, 1625, 1649, 1688, 2140
LweI	GCATC	5 cut(s)	95, 121, 1081, 1401, 2155
MaeI	CTAG	6 cut(s)	776, 1031, 1823, 2070, 2097, 2251
MaeII	ACGT	7 cut(s)	375, 485, 529, 870, 2025, 2039, 2148
MaeIII	GTNAC	4 cut(s)	641, 1355, 1576, 2017
MbiI	CCGCTC	1 cut(s)	298
MboII	GAAGA	7 cut(s)	164, 821, 860, 1244, 1258, 1443, 1748
MflI	RGATCY	2 cut(s)	850, 1276
MhlI	GDGCHC	7 cut(s)	529, 549, 712, 735, 946, 970, 1673
MlsI	TGGCCA	2 cut(s)	352, 409
MluNI	TGGCCA	2 cut(s)	352, 409
Mly113I	GGCGCC	1 cut(s)	701
MlyI	GAGTC	2 cut(s)	1021, 1979
MmeI	TCCRAC	3 cut(s)	219, 825, 1323
MnlI	CCTC	9 cut(s)	31, 97, 686, 864, 1228, 1236, 1346, 1451, 2073
Mox20I	TGGCCA	2 cut(s)	352, 409
MscI	TGGCCA	2 cut(s)	352, 409
MseI	TTAA	8 cut(s)	95, 134, 1043, 1386, 1646, 1946, 1974, 2244
MslI	CAYNNNNRTG	3 cut(s)	62, 457, 1838
Msp20I	TGGCCA	2 cut(s)	352, 409
MspA1I	CMGCKG	4 cut(s)	235, 356, 899, 929
MspI	CCGG	1 cut(s)	1818
MspR9I	CCNGG	6 cut(s)	791, 973, 1479, 1509, 1818, 1871
MvaI	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
MvnI	CGCG	1 cut(s)	706
MwoI	GCNNNNNNNGC	4 cut(s)	266, 707, 716, 1634
NarI	GGCGCC	1 cut(s)	701
NciI	CCSGG	1 cut(s)	1818
NcoI	CCATGG	1 cut(s)	783
NdeI	CATATG	1 cut(s)	347
NheI	GCTAGC	1 cut(s)	775
NlaIV	GGNNCC	5 cut(s)	548, 616, 702, 1342, 1670
NmeAIII	GCCGAG	1 cut(s)	1225
NmuCI	GTSAC	3 cut(s)	1355, 1576, 2017
NspI	RCATGY	2 cut(s)	474, 716
PagI	TCATGA	1 cut(s)	1695
PaqCI	CACCTGC	1 cut(s)	1238
PasI	CCCWGGG	2 cut(s)	1508, 1870
PceI	AGGCCT	1 cut(s)	561
PciI	ACATGT	2 cut(s)	470, 712
PcsI	WCGNNNNNNNCGW	1 cut(s)	2154
PfeI	GAWTC	4 cut(s)	934, 1263, 1321, 1745
Ple19I	CGATCG	1 cut(s)	1006
PleI	GAGTC	2 cut(s)	1021, 1979
PluTI	GGCGCC	1 cut(s)	704
PpsI	GAGTC	2 cut(s)	1021, 1979
PscI	ACATGT	2 cut(s)	470, 712
PshBI	ATTAAT	1 cut(s)	134
Psp6I	CCWGG	5 cut(s)	789, 971, 1477, 1507, 1869
PspEI	GGTNACC	1 cut(s)	641
PspFI	CCCAGC	2 cut(s)	929, 1672
PspGI	CCWGG	5 cut(s)	789, 971, 1477, 1507, 1869
PspN4I	GGNNCC	5 cut(s)	548, 616, 702, 1342, 1670
PspPI	GGNCC	5 cut(s)	67, 117, 787, 1460, 2239
PsrI	GAACNNNNNNTAC	2 cut(s)	941, 973
PstI	CTGCAG	2 cut(s)	640, 1531
PstNI	CAGNNNCTG	2 cut(s)	767, 899
PsuI	RGATCY	2 cut(s)	850, 1276
PvuI	CGATCG	1 cut(s)	1006
PvuII	CAGCTG	3 cut(s)	235, 356, 899
RsaI	GTAC	6 cut(s)	182, 725, 760, 1867, 1877, 2101
RsaNI	GTAC	6 cut(s)	181, 724, 759, 1866, 1876, 2100
RseI	CAYNNNNRTG	3 cut(s)	62, 457, 1838
SalI	GTCGAC	1 cut(s)	1715
SaqAI	TTAA	8 cut(s)	95, 134, 1043, 1386, 1646, 1946, 1974, 2244
Sau96I	GGNCC	5 cut(s)	67, 117, 787, 1460, 2239
ScaI	AGTACT	1 cut(s)	2101
SchI	GAGTC	2 cut(s)	1021, 1979
ScrFI	CCNGG	6 cut(s)	791, 973, 1479, 1509, 1818, 1871
SduI	GDGCHC	7 cut(s)	529, 549, 712, 735, 946, 970, 1673
SfaNI	GCATC	5 cut(s)	95, 121, 1081, 1401, 2155
SfcI	CTRYAG	3 cut(s)	636, 1335, 1527
SfoI	GGCGCC	1 cut(s)	702
SinI	GGWCC	4 cut(s)	67, 117, 787, 1460
SmiMI	CAYNNNNRTG	3 cut(s)	62, 457, 1838
SmlI	CTYRAG	1 cut(s)	290
SmoI	CTYRAG	1 cut(s)	290
SpeI	ACTAGT	1 cut(s)	1822
SseBI	AGGCCT	1 cut(s)	561
SsiI	CCGC	6 cut(s)	278, 296, 704, 844, 927, 1197
SspDI	GGCGCC	1 cut(s)	700
SspMI	CTAG	6 cut(s)	776, 1031, 1823, 2070, 2097, 2251
StuI	AGGCCT	1 cut(s)	561
StyD4I	CCNGG	6 cut(s)	789, 971, 1477, 1507, 1816, 1869
StyI	CCWWGG	2 cut(s)	783, 1344
TaaI	ACNGT	6 cut(s)	605, 985, 1048, 1309, 2089, 2162
TaiI	ACGT	7 cut(s)	378, 488, 532, 873, 2028, 2042, 2151
TaqI	TCGA	5 cut(s)	393, 1002, 1371, 1716, 2157
TaqII	GACCGA	1 cut(s)	105
TatI	WGTACW	4 cut(s)	180, 723, 758, 2099
TauI	GCSGC	3 cut(s)	298, 706, 929
TfiI	GAWTC	4 cut(s)	934, 1263, 1321, 1745
Tru1I	TTAA	8 cut(s)	95, 134, 1043, 1386, 1646, 1946, 1974, 2244
Tru9I	TTAA	8 cut(s)	95, 134, 1043, 1386, 1646, 1946, 1974, 2244
TscAI	CASTG	6 cut(s)	30, 217, 610, 1021, 1536, 2167
TseFI	GTSAC	3 cut(s)	1355, 1576, 2017
TseI	GCWGC	9 cut(s)	356, 635, 779, 896, 1526, 1613, 1637, 1676, 2128
Tsp45I	GTSAC	3 cut(s)	1355, 1576, 2017
TspDTI	ATGAA	5 cut(s)	1258, 1540, 1826, 1850, 1907
TspGWI	ACGGA	2 cut(s)	819, 1289
TspRI	CASTG	6 cut(s)	30, 217, 610, 1021, 1536, 2167
VneI	GTGCAC	1 cut(s)	708
VpaK11BI	GGWCC	4 cut(s)	67, 117, 787, 1460
VspI	ATTAAT	1 cut(s)	134
XapI	RAATTY	1 cut(s)	402
XbaI	TCTAGA	1 cut(s)	1030
XceI	RCATGY	2 cut(s)	474, 716
XcmI	CCANNNNNNNNNTGG	1 cut(s)	608
XmiI	GTMKAC	1 cut(s)	1716
XspI	CTAG	6 cut(s)	776, 1031, 1823, 2070, 2097, 2251
ZrmI	AGTACT	1 cut(s)	2101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.