Rorug07G0132500

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0018443
Physical Location & Seq
Forward (+)
10441807 .. 10444351
2545 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0132500.1

Sequence Viewer

Length: 2331 bp
ATGGCTATCTCTCAAGAACTCTACCCCTCCCAAGACGACCTCCTCTACGAAGAAGAGCTTCTCCGAAACCCTTACAGCCTCAAGCTCTGGTGGCGCTACCTTATCGCCCGATCCGACGCGCCCTTCAGGAAGCGCCGCACCATCTACGAGCGCGCCCTCAAGGCCCTTCCCGGAAGCTACAAGCTTTGGTACGCCTACCTTAGCGAGCGTCTAGAGCTCGTCCGCAACTTTCCGATCAACCATTCCGAGTACGAAACCCTAAACAACACCTTCGAGAGGGCGTTGGTGACAATGCATAAGATGCCGCGGATTTGGATTCTGTATTTACAGAGCCTGACGGAGCAGAGATTGGGCATGAGGACTCGCCGGAGTTTCAATCGGGCGCTGTGTGCTCTGCCGGTGCAACAGCACGACCGGATTTGGGAGCTGTATTTGGTGTTCGTGAGCCAGAAGGGGATCCCTATCCAGACCTCGCTTCGGGTCTACCGGAGGTACTTGCTTTATGACCCGACTCATGTTGAGGATTTTATTGCGTTTTTGATAGAGTCTGAGCTGTGGCAAGAGGTGGCGGAGCGGCTGGCCTCAATGCTTAATGATGATCAGTTTAGGTTGATTAAGGGAAAGAGTAAGCATAGGTTGTGGTTGGAGTTGTGTGATTTGCTTACTAAGAATGCCACGGCGGTTTCAGGGTTGAATGTGGATGCTATCATTAGAGGTGGGATTAAGAAGTTTACGGATGAGGTGGGAGGGTTGTGGACGTCGTTGCCGGATTATTATATTAAGAGGGGTTTGTTTGAGAAGGCTAGGGATGTGTTTGAGGAGGGGATGCAGACTGTGGTGACTGTGAGGGATTTTAGTGTGATTTTCGATGCGTATGCGCAGTTTGAACAGAGTATACTTGCAATTAAGATGGAGGCTTTGGGGAGTTTTGAGGAGGAGGAGGAGGAAGGAGAGAATGGGAGAATGGAAGATGAGGGCAGTGAAGAGGAGGAGGAAGATGTCCGAACCAATGTAGACTTGTCTGTGGCTGAGGTTGAGAGGAAAATACTCCATGGGTTTTGGCTATATGATGAGAATGATGTTGATTTGAGGTTGGCTCGATTGGACCATCTTATGGATAGAAGACCTGAACTAGCTAATAGTGTTCTTTTGAGACAAAATCCGCATAATGTAGAGCAATGGCACCGGAGAGTGAAGCTGTTTGAGGGGAATCCTACAAAGCTGTTTGAAGATGCATTTAAAGTCTATGAAAAGGGTACTCAAATATTCAAGTACCCGCATGTCAAAGACTTATGGATTATATATCTCTCTAAATTTGTAAAAAGATATGGGAAGAATAAGCTGGAACGTGCAAGACTGCTATTTGAGGATGCTGTTAAAGCGGCTCCTGCTGATGCGAAGAAATCATTGTATCTTCAATTTGCAAAGCTGGAGGAGGATTATGGTCTAGCAAAGCGGGCTATGAAGGTCTATGATGAAGCAACTAAGGCGGTTCCAAACCATGAAAAGTTGAGCATGTATGAAATCTATATTGCACGTGCAGCTAAGATATTTAGGATCCCCAAAACAAGGGAGATATATGAGCAAGCAATAGAATCTGGACTCCCTGACAAAGATGTGAAGACAATGTGTCTAAAGTATGCCGAGCTCGAGAAGAGCTTGGGCGAAATTGATCGTGCTCGGGGAGTTTACGTATTTGCATCTCAGTTTTCAGATCCACGATCGGATGCAGAATTCTGGAACAAATGGCACGAGTTTGAGGTGCAACACGGGAATGAAGATATGTTTAGAGAAATGCTTCGAATCAAACAGAGTGTTTCTGCAAGCTATAGCCAGACGTACTTTATTTTACCCGAGTATATGATGCAAAAGGATCAGAGGTTGAGCATTGACGAGGCAAAAGACAAATTGAAACAAGCTGGAGTCCCCGAAGATGAAATGGCTGCTCTTGAGAGGCATTTGGCTCCTGCGATCAGCGATACACCCTCTAAAGACAGCAACAGAAAAGTGGGCAGAAAAGTGGGCTTTGTGAGTGTTGGAATAGAATCACAGATTAATGGAGGGATAAAAGTTGCTGCAAATCACGAAGACATTGAACTACCAGAAGAAAGTGATTCTGAAGATGAGGCAAATGTTGAAATAGCACAAAAGGAGGTCCCAGCTACTGTTTTTGGAGATTTGGCTAACAAGAGAAAGGATTGTGAAGATAATGAGGGTGGAGACAAGGATAGTGAGAGCCGCCTTGGAGCTCTTGAGAGAATAAAAAGGCTGAAAAAAAGTGTGATTAATGAAGGTTTTGATGCATTGGATATTGAGCGCATTTTGTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 ko04016 ko04075 ko04931 map04014 map04016 map04075 map04931
Pfam Domains
Protein Families
LRR_8 NB-ARC PP2C TIR VQ

Protein Analysis

776

Amino Acids

90.5

Weight (kDa)

5.49

Isoelectric Point (pI)

49.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAT_Syf1_CNRKL1_N PF23233 12 - 170 6.8e-56 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_Syf1_M PF23220 173 - 319 9.6e-55 Pre-mRNA-splicing factor SYF1 middle HAT repeat
HAT_Syf1_M PF23220 356 - 408 1.1e-18 Pre-mRNA-splicing factor SYF1 middle HAT repeat
HAT_Syf1_CNRKL1_C PF23231 406 - 653 1.7e-111 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018443)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g16070 FvH4_5g16070 FvH4_5g16070 FvH4_5g16070 FvH4_5g16070
rosa_rugosa Rorug07G0132500 Rorug07G0132600
rosa_samantha Rh7AG265500 Rh7CG282200
rosa_wichuraiana Rw7G022730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 761
Acc16I TGCGCA 1 cut(s) 879
AccB1I GGYRCC 1 cut(s) 1182
AccB7I CCANNNNNTGG 1 cut(s) 1114
AccBSI CCGCTC 1 cut(s) 574
AccI GTMKAC 3 cut(s) 483, 895, 1014
AccII CGCG 3 cut(s) 119, 153, 307
AclWI GGATC 7 cut(s) 105, 451, 464, 1552, 1565, 1709, 1881
AcsI RAATTY 2 cut(s) 1313, 1733
AcuI CTGAAG 2 cut(s) 109, 2139
AcvI CACGTG 1 cut(s) 1538
AcyI GRCGYC 1 cut(s) 758
AfaI GTAC 6 cut(s) 191, 251, 494, 1258, 1274, 1841
AfiI CCNNNNNNNGG 5 cut(s) 276, 421, 477, 1114, 1569
AgsI TTSAA 9 cut(s) 376, 694, 887, 1229, 1270, 1418, 1912, 2096, 2138
AhdI GACNNNNNGTC 1 cut(s) 1629
Alw21I GWGCWC 5 cut(s) 219, 394, 1650, 1681, 2251
Alw26I GTCTC 2 cut(s) 1147, 2214
AlwI GGATC 7 cut(s) 105, 451, 464, 1552, 1565, 1709, 1881
AlwNI CAGNNNCTG 2 cut(s) 334, 2165
Ama87I CYCGRG 3 cut(s) 1649, 1680, 1853
AoxI GGCC 2 cut(s) 162, 579
ApeKI GCWGC 3 cut(s) 1541, 1943, 2075
ApoI RAATTY 2 cut(s) 1313, 1733
AseI ATTAAT 2 cut(s) 2055, 2286
Asp700I GAANNNNTTC 2 cut(s) 57, 1797
AspLEI GCGC 8 cut(s) 96, 121, 135, 153, 155, 385, 880, 2319
AspS9I GGNCC 3 cut(s) 163, 1105, 2155
AsuC2I CCSGG 1 cut(s) 171
AsuHPI GGTGA 2 cut(s) 298, 850
AsuII TTCGAA 1 cut(s) 1801
AvaI CYCGRG 3 cut(s) 1649, 1680, 1853
AvaII GGWCC 2 cut(s) 1105, 2155
BamHI GGATCC 2 cut(s) 456, 1557
BanI GGYRCC 1 cut(s) 1182
BanII GRGCYC 3 cut(s) 219, 1650, 2251
BauI CACGAG 1 cut(s) 1751
BbrPI CACGTG 1 cut(s) 1538
BbsI GAAGAC 3 cut(s) 1129, 1628, 2094
Bbv12I GWGCWC 5 cut(s) 219, 394, 1650, 1681, 2251
BbvCI CCTCAGC 1 cut(s) 1029
BbvI GCAGC 3 cut(s) 1553, 1930, 2062
BccI CCATC 3 cut(s) 149, 904, 1116
BceAI ACGGC 1 cut(s) 693
BcgI CGANNNNNNTGC 2 cut(s) 857, 891
BclI TGATCA 1 cut(s) 598
BcnI CCSGG 1 cut(s) 171
BcoDI GTCTC 2 cut(s) 1147, 2214
BfaI CTAG 4 cut(s) 212, 804, 1133, 1448
BfmI CTRYAG 1 cut(s) 1828
BfoI RGCGCY 3 cut(s) 97, 136, 386
BglI GCCNNNNNGGC 1 cut(s) 161
BisI GCNGC 8 cut(s) 136, 305, 575, 1383, 1542, 1944, 2076, 2239
BlsI GCNGC 8 cut(s) 137, 306, 576, 1384, 1543, 1945, 2077, 2240
Bme1390I CCNGG 1 cut(s) 171
Bme18I GGWCC 2 cut(s) 1105, 2155
BmeRI GACNNNNNGTC 1 cut(s) 1629
BmeT110I CYCGRG 3 cut(s) 1649, 1680, 1853
BmgT120I GGNCC 3 cut(s) 163, 1105, 2155
BmiI GGNNCC 7 cut(s) 458, 1184, 1386, 1494, 1559, 1965, 2157
BmrFI CCNGG 1 cut(s) 171
BpiI GAAGAC 3 cut(s) 1129, 1628, 2094
BplI GAGNNNNNCTC 2 cut(s) 1081, 1113
BpmI CTGGAG 2 cut(s) 1451, 1941
Bpu10I CCTNAGC 2 cut(s) 200, 1029
Bpu14I TTCGAA 1 cut(s) 1801
BpuEI CTTGAG 4 cut(s) 65, 143, 1970, 2273
BpuMI CCSGG 1 cut(s) 171
BsaAI YACGTR 2 cut(s) 1538, 1693
BsaBI GATNNNNATC 1 cut(s) 461
BsaHI GRCGYC 1 cut(s) 758
BsaJI CCNNGG 4 cut(s) 305, 675, 1051, 2242
BsaWI WCCGGW 3 cut(s) 414, 486, 1185
BsaXI ACNNNNNCTCC 2 cut(s) 1677, 1707
Bsc4I CCNNNNNNNGG 5 cut(s) 276, 421, 477, 1114, 1569
Bse118I RCCGGY 1 cut(s) 397
Bse3DI GCAATG 1 cut(s) 1184
Bse8I GATNNNNATC 1 cut(s) 461
BseDI CCNNGG 4 cut(s) 305, 675, 1051, 2242
BseGI GGATG 6 cut(s) 706, 742, 814, 831, 1375, 1732
BseJI GATNNNNATC 1 cut(s) 461
BseLI CCNNNNNNNGG 5 cut(s) 276, 421, 477, 1114, 1569
BseMI GCAATG 1 cut(s) 1184
BseMII CTCAG 3 cut(s) 540, 1020, 1718
BsePI GCGCGC 1 cut(s) 151
BseRI GAGGAG 9 cut(s) 32, 833, 947, 950, 953, 956, 1001, 1004, 1448
BseXI GCAGC 3 cut(s) 1553, 1930, 2062
BseYI CCCAGC 1 cut(s) 2158
BsgI GTGCAG 1 cut(s) 1560
Bsh1236I CGCG 3 cut(s) 119, 153, 307
Bsh1285I CGRYCG 2 cut(s) 415, 1724
BshFI GGCC 2 cut(s) 164, 581
BshNI GGYRCC 1 cut(s) 1182
BsiEI CGRYCG 2 cut(s) 415, 1724
BsiHKAI GWGCWC 5 cut(s) 219, 394, 1650, 1681, 2251
BsiHKCI CYCGRG 3 cut(s) 1649, 1680, 1853
BsiSI CCGG 7 cut(s) 171, 367, 398, 415, 487, 767, 1186
BslFI GGGAC 2 cut(s) 1910, 2141
BslI CCNNNNNNNGG 5 cut(s) 276, 421, 477, 1114, 1569
BsmAI GTCTC 2 cut(s) 1147, 2214
BsmFI GGGAC 2 cut(s) 1910, 2141
BsmI GAATGC 1 cut(s) 676
BsnI GGCC 2 cut(s) 164, 581
BsoBI CYCGRG 3 cut(s) 1649, 1680, 1853
Bsp119I TTCGAA 1 cut(s) 1801
Bsp1286I GDGCHC 5 cut(s) 219, 394, 1650, 1681, 2251
Bsp19I CCATGG 1 cut(s) 1051
BspANI GGCC 2 cut(s) 164, 581
BspCNI CTCAG 3 cut(s) 541, 1021, 1717
BspFNI CGCG 3 cut(s) 119, 153, 307
BspLI GGNNCC 7 cut(s) 458, 1184, 1386, 1494, 1559, 1965, 2157
BspPI GGATC 7 cut(s) 105, 451, 464, 1552, 1565, 1709, 1881
BspQI GCTCTTC 2 cut(s) 48, 1649
BspT104I TTCGAA 1 cut(s) 1801
BspT107I GGYRCC 1 cut(s) 1182
BsrBI CCGCTC 1 cut(s) 574
BsrDI GCAATG 1 cut(s) 1184
BsrFI RCCGGY 1 cut(s) 397
BssAI RCCGGY 1 cut(s) 397
BssECI CCNNGG 4 cut(s) 305, 675, 1051, 2242
BssHII GCGCGC 1 cut(s) 151
BssNAI GTATAC 1 cut(s) 896
BssNI GRCGYC 1 cut(s) 758
BssSI CACGAG 1 cut(s) 1751
BssT1I CCWWGG 2 cut(s) 1051, 2242
Bst1107I GTATAC 1 cut(s) 896
Bst2BI CACGAG 1 cut(s) 1751
Bst4CI ACNGT 3 cut(s) 835, 844, 2167
Bst6I CTCTTC 3 cut(s) 48, 978, 1649
BstACI GRCGYC 1 cut(s) 758
BstAPI GCANNNNNTGC 1 cut(s) 301
BstBAI YACGTR 2 cut(s) 1538, 1693
BstBI TTCGAA 1 cut(s) 1801
BstC8I GCNNGC 6 cut(s) 153, 206, 579, 1458, 1587, 1825
BstDEI CTNAG 7 cut(s) 200, 549, 666, 1029, 1485, 1545, 1704
BstDSI CCRYGG 3 cut(s) 305, 675, 1051
BstENI CCTNNNNNAGG 1 cut(s) 274
BstF5I GGATG 6 cut(s) 706, 742, 814, 831, 1375, 1732
BstFNI CGCG 3 cut(s) 119, 153, 307
BstH2I RGCGCY 3 cut(s) 97, 136, 386
BstHHI GCGC 8 cut(s) 96, 121, 135, 153, 155, 385, 880, 2319
BstMAI GTCTC 2 cut(s) 1147, 2214
BstMCI CGRYCG 2 cut(s) 415, 1724
BstNSI RCATGY 2 cut(s) 1283, 1519
BstSCI CCNGG 1 cut(s) 169
BstSFI CTRYAG 1 cut(s) 1828
BstSNI TACGTA 1 cut(s) 1693
BstUI CGCG 3 cut(s) 119, 153, 307
BstV1I GCAGC 3 cut(s) 1553, 1930, 2062
BstV2I GAAGAC 3 cut(s) 1129, 1628, 2094
BstX2I RGATCY 3 cut(s) 456, 1557, 1714
BstYI RGATCY 3 cut(s) 456, 1557, 1714
BstZ17I GTATAC 1 cut(s) 896
BsuRI GGCC 2 cut(s) 164, 581
BtgI CCRYGG 3 cut(s) 305, 675, 1051
BtsCI GGATG 6 cut(s) 706, 742, 814, 831, 1375, 1732
BtsI GCAGTG 1 cut(s) 985
BtsIMutI CAGTG 1 cut(s) 985
Cac8I GCNNGC 6 cut(s) 153, 206, 579, 1458, 1587, 1825
CaiI CAGNNNCTG 2 cut(s) 334, 2165
CfoI GCGC 8 cut(s) 96, 121, 135, 153, 155, 385, 880, 2319
Cfr10I RCCGGY 1 cut(s) 397
Cfr13I GGNCC 3 cut(s) 163, 1105, 2155
Cfr42I CCGCGG 1 cut(s) 308
CseI GACGC 2 cut(s) 125, 197
Csp6I GTAC 6 cut(s) 190, 250, 493, 1257, 1273, 1840
CviAII CATG 6 cut(s) 355, 515, 1052, 1280, 1502, 1516
CviQI GTAC 6 cut(s) 190, 250, 493, 1257, 1273, 1840
DdeI CTNAG 7 cut(s) 200, 549, 666, 1029, 1485, 1545, 1704
DraI TTTAAA 1 cut(s) 1240
DriI GACNNNNNGTC 1 cut(s) 1629
Eam1104I CTCTTC 3 cut(s) 48, 978, 1649
Eam1105I GACNNNNNGTC 1 cut(s) 1629
EarI CTCTTC 3 cut(s) 48, 978, 1649
EciI GGCGGA 1 cut(s) 584
Ecl136II GAGCTC 3 cut(s) 217, 1648, 2249
Eco105I TACGTA 1 cut(s) 1693
Eco130I CCWWGG 2 cut(s) 1051, 2242
Eco24I GRGCYC 3 cut(s) 219, 1650, 2251
Eco47I GGWCC 2 cut(s) 1105, 2155
Eco53kI GAGCTC 3 cut(s) 217, 1648, 2249
Eco57I CTGAAG 2 cut(s) 109, 2139
Eco72I CACGTG 1 cut(s) 1538
Eco88I CYCGRG 3 cut(s) 1649, 1680, 1853
EcoICRI GAGCTC 3 cut(s) 217, 1648, 2249
EcoNI CCTNNNNNAGG 1 cut(s) 274
EcoO109I RGGNCCY 2 cut(s) 163, 2155
EcoRI GAATTC 1 cut(s) 1733
EcoT14I CCWWGG 2 cut(s) 1051, 2242
EcoT22I ATGCAT 3 cut(s) 297, 1237, 2305
EcoT38I GRGCYC 3 cut(s) 219, 1650, 2251
ErhI CCWWGG 2 cut(s) 1051, 2242
FaeI CATG 6 cut(s) 358, 518, 1055, 1283, 1505, 1519
FalI AAGNNNNNCTT 2 cut(s) 42, 74
FaqI GGGAC 2 cut(s) 1910, 2141
FatI CATG 6 cut(s) 354, 514, 1051, 1279, 1501, 1515
FauI CCCGC 2 cut(s) 1284, 1449
FbaI TGATCA 1 cut(s) 598
FblI GTMKAC 3 cut(s) 483, 895, 1014
Fnu4HI GCNGC 8 cut(s) 136, 305, 575, 1383, 1542, 1944, 2076, 2239
FokI GGATG 6 cut(s) 713, 749, 821, 838, 1382, 1739
FriOI GRGCYC 3 cut(s) 219, 1650, 2251
Fsp4HI GCNGC 8 cut(s) 136, 305, 575, 1383, 1542, 1944, 2076, 2239
FspBI CTAG 4 cut(s) 212, 804, 1133, 1448
FspI TGCGCA 1 cut(s) 879
GlaI GCGC 8 cut(s) 95, 120, 134, 152, 154, 384, 879, 2318
GluI GCNGC 8 cut(s) 136, 305, 575, 1383, 1542, 1944, 2076, 2239
GsaI CCCAGC 1 cut(s) 2162
GsuI CTGGAG 2 cut(s) 1451, 1941
HaeII RGCGCY 3 cut(s) 97, 136, 386
HaeIII GGCC 2 cut(s) 164, 581
HapII CCGG 7 cut(s) 171, 367, 398, 415, 487, 767, 1186
HgaI GACGC 2 cut(s) 125, 197
HhaI GCGC 8 cut(s) 96, 121, 135, 153, 155, 385, 880, 2319
Hin1I GRCGYC 1 cut(s) 758
Hin1II CATG 6 cut(s) 358, 518, 1055, 1283, 1505, 1519
Hin6I GCGC 8 cut(s) 94, 119, 133, 151, 153, 383, 878, 2317
HinP1I GCGC 8 cut(s) 94, 119, 133, 151, 153, 383, 878, 2317
HindIII AAGCTT 1 cut(s) 182
HpaII CCGG 7 cut(s) 171, 367, 398, 415, 487, 767, 1186
HphI GGTGA 2 cut(s) 298, 850
Hpy166II GTNNAC 6 cut(s) 484, 732, 756, 896, 1015, 1690
Hpy8I GTNNAC 6 cut(s) 484, 732, 756, 896, 1015, 1690
Hpy99I CGWCG 2 cut(s) 119, 763
HpyAV CCTTC 8 cut(s) 133, 176, 280, 445, 793, 941, 1459, 2285
HpyCH4III ACNGT 3 cut(s) 835, 844, 2167
HpyCH4IV ACGT 5 cut(s) 758, 1348, 1537, 1692, 1838
HpyF3I CTNAG 7 cut(s) 200, 549, 666, 1029, 1485, 1545, 1704
HpySE526I ACGT 5 cut(s) 758, 1348, 1537, 1692, 1838
Hsp92I GRCGYC 1 cut(s) 758
Hsp92II CATG 6 cut(s) 358, 518, 1055, 1283, 1505, 1519
HspAI GCGC 8 cut(s) 94, 119, 133, 151, 153, 383, 878, 2317
Ksp22I TGATCA 1 cut(s) 598
KspI CCGCGG 1 cut(s) 308
LguI GCTCTTC 2 cut(s) 48, 1649
LmnI GCTCC 6 cut(s) 340, 424, 571, 1390, 1969, 2246
Lsp1109I GCAGC 3 cut(s) 1553, 1930, 2062
MaeI CTAG 4 cut(s) 212, 804, 1133, 1448
MaeII ACGT 5 cut(s) 758, 1348, 1537, 1692, 1838
MaeIII GTNAC 2 cut(s) 286, 838
MbiI CCGCTC 1 cut(s) 574
MflI RGATCY 3 cut(s) 456, 1557, 1714
MhlI GDGCHC 5 cut(s) 219, 394, 1650, 1681, 2251
MluCI AATT 6 cut(s) 903, 1313, 1418, 1668, 1733, 1907
MlyI GAGTC 5 cut(s) 355, 505, 554, 1596, 1932
MmeI TCCRAC 3 cut(s) 138, 624, 2017
Mph1103I ATGCAT 3 cut(s) 297, 1237, 2305
MroXI GAANNNNTTC 2 cut(s) 57, 1797
MseI TTAA 9 cut(s) 591, 615, 723, 780, 906, 1239, 1377, 2055, 2286
MslI CAYNNNNRTG 1 cut(s) 1773
MspA1I CMGCKG 1 cut(s) 307
MspI CCGG 7 cut(s) 171, 367, 398, 415, 487, 767, 1186
MspR9I CCNGG 1 cut(s) 171
Mva1269I GAATGC 1 cut(s) 676
MvnI CGCG 3 cut(s) 119, 153, 307
NciI CCSGG 1 cut(s) 171
NcoI CCATGG 1 cut(s) 1051
NlaIII CATG 6 cut(s) 358, 518, 1055, 1283, 1505, 1519
NlaIV GGNNCC 7 cut(s) 458, 1184, 1386, 1494, 1559, 1965, 2157
NmeAIII GCCGAG 1 cut(s) 1669
NmuCI GTSAC 2 cut(s) 286, 838
NsbI TGCGCA 1 cut(s) 879
NsiI ATGCAT 3 cut(s) 297, 1237, 2305
NspI RCATGY 2 cut(s) 1283, 1519
NspV TTCGAA 1 cut(s) 1801
PaeR7I CTCGAG 1 cut(s) 1649
PauI GCGCGC 1 cut(s) 151
PciSI GCTCTTC 2 cut(s) 48, 1649
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PctI GAATGC 1 cut(s) 676
PdmI GAANNNNTTC 2 cut(s) 57, 1797
PfeI GAWTC 6 cut(s) 316, 1210, 1595, 1803, 2045, 2114
PflMI CCANNNNNTGG 1 cut(s) 1114
PfoI TCCNGGA 1 cut(s) 169
PkrI GCNGC 8 cut(s) 137, 306, 576, 1384, 1543, 1945, 2077, 2240
Ple19I CGATCG 1 cut(s) 1724
PleI GAGTC 5 cut(s) 355, 505, 553, 1596, 1931
PmaCI CACGTG 1 cut(s) 1538
PmlI CACGTG 1 cut(s) 1538
PpsI GAGTC 5 cut(s) 355, 505, 553, 1596, 1931
Ppu21I YACGTR 2 cut(s) 1538, 1693
PpuMI RGGWCCY 1 cut(s) 2155
PshBI ATTAAT 2 cut(s) 2055, 2286
Psp124BI GAGCTC 3 cut(s) 219, 1650, 2251
Psp5II RGGWCCY 1 cut(s) 2155
PspCI CACGTG 1 cut(s) 1538
PspFI CCCAGC 1 cut(s) 2158
PspN4I GGNNCC 7 cut(s) 458, 1184, 1386, 1494, 1559, 1965, 2157
PspPI GGNCC 3 cut(s) 163, 1105, 2155
PspPPI RGGWCCY 1 cut(s) 2155
PsrI GAACNNNNNNTAC 4 cut(s) 422, 454, 879, 911
PstNI CAGNNNCTG 2 cut(s) 334, 2165
PsuI RGATCY 3 cut(s) 456, 1557, 1714
PteI GCGCGC 1 cut(s) 151
PvuI CGATCG 1 cut(s) 1724
RsaI GTAC 6 cut(s) 191, 251, 494, 1258, 1274, 1841
RsaNI GTAC 6 cut(s) 190, 250, 493, 1257, 1273, 1840
RseI CAYNNNNRTG 1 cut(s) 1773
SacI GAGCTC 3 cut(s) 219, 1650, 2251
SacII CCGCGG 1 cut(s) 308
SapI GCTCTTC 2 cut(s) 48, 1649
SaqAI TTAA 9 cut(s) 591, 615, 723, 780, 906, 1239, 1377, 2055, 2286
SatI GCNGC 8 cut(s) 136, 305, 575, 1383, 1542, 1944, 2076, 2239
Sau96I GGNCC 3 cut(s) 163, 1105, 2155
SchI GAGTC 5 cut(s) 355, 505, 554, 1596, 1932
ScrFI CCNGG 1 cut(s) 171
SduI GDGCHC 5 cut(s) 219, 394, 1650, 1681, 2251
SfcI CTRYAG 1 cut(s) 1828
Sfr274I CTCGAG 1 cut(s) 1649
Sfr303I CCGCGG 1 cut(s) 308
SfuI TTCGAA 1 cut(s) 1801
SgrBI CCGCGG 1 cut(s) 308
SinI GGWCC 2 cut(s) 1105, 2155
SlaI CTCGAG 1 cut(s) 1649
SmiMI CAYNNNNRTG 1 cut(s) 1773
SmlI CTYRAG 6 cut(s) 12, 80, 158, 1649, 1949, 2252
SmoI CTYRAG 6 cut(s) 12, 80, 158, 1649, 1949, 2252
SnaBI TACGTA 1 cut(s) 1693
Sse9I AATT 6 cut(s) 903, 1313, 1418, 1668, 1733, 1907
SspI AATATT 1 cut(s) 1266
SspMI CTAG 4 cut(s) 212, 804, 1133, 1448
SstI GAGCTC 3 cut(s) 219, 1650, 2251
StyD4I CCNGG 1 cut(s) 169
StyI CCWWGG 2 cut(s) 1051, 2242
TaaI ACNGT 3 cut(s) 835, 844, 2167
TaiI ACGT 5 cut(s) 761, 1351, 1540, 1695, 1841
TaqI TCGA 5 cut(s) 273, 867, 1099, 1650, 1801
TasI AATT 6 cut(s) 903, 1313, 1418, 1668, 1733, 1907
TauI GCSGC 5 cut(s) 138, 307, 577, 1385, 2241
TfiI GAWTC 6 cut(s) 316, 1210, 1595, 1803, 2045, 2114
Tru1I TTAA 9 cut(s) 591, 615, 723, 780, 906, 1239, 1377, 2055, 2286
Tru9I TTAA 9 cut(s) 591, 615, 723, 780, 906, 1239, 1377, 2055, 2286
TscAI CASTG 1 cut(s) 985
TseFI GTSAC 2 cut(s) 286, 838
TseI GCWGC 3 cut(s) 1541, 1943, 2075
Tsp45I GTSAC 2 cut(s) 286, 838
TspDTI ATGAA 8 cut(s) 1263, 1478, 1491, 1518, 1536, 1791, 1950, 2304
TspGWI ACGGA 2 cut(s) 353, 749
TspRI CASTG 1 cut(s) 985
Van91I CCANNNNNTGG 1 cut(s) 1114
VpaK11BI GGWCC 2 cut(s) 1105, 2155
VspI ATTAAT 2 cut(s) 2055, 2286
XagI CCTNNNNNAGG 1 cut(s) 274
XapI RAATTY 2 cut(s) 1313, 1733
XbaI TCTAGA 1 cut(s) 211
XceI RCATGY 2 cut(s) 1283, 1519
XhoI CTCGAG 1 cut(s) 1649
XmiI GTMKAC 3 cut(s) 483, 895, 1014
XmnI GAANNNNTTC 2 cut(s) 57, 1797
XspI CTAG 4 cut(s) 212, 804, 1133, 1448
ZraI GACGTC 1 cut(s) 759
Zsp2I ATGCAT 3 cut(s) 297, 1237, 2305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.