Rw7G022730

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0018443
Physical Location & Seq
Forward (+)
27052099 .. 27057785
5687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G022730.1

Sequence Viewer

Length: 3222 bp
ATGGCCACCAGCAGCAGAAGCGGCGACCCATTTCCTCCATCCTCGGAATTATGGAAGTACGATGTCTTCTTGAGCTTTAGAGGGCAAGACACACGCCGCAACTTCACAGACCATCTATACACGGCGTTGCTACAAGCTGGAGTCTTCGTCTTTCGTGATGATGAGGAACTACTGAGAGGGGAGTCAATAGCAGGTGATCTGCAGAAAGCAATAGAAGAGTCGAAGATCTCTGTCGTCGTCTTTTCGAAGGGTTATGCAAGGTCCAAATGGTGTCTAGAGGAGCTGGCGAAGATCATGGAGTGTAGATCAATGTATGGCCAAAGCGTCGTTCGAGTATTCTATGATGTTGAACCTTCAGAGGTGAGAAGACAGACGGGTAGTTTTGCAGAAGCATTTGCCAAACATGAAGAGCGCTTCGGGGGCGATTTGGGAAGAGTAGAGAGGTGGAGAAATGCTCTAACTGAAGCTGCAAATTTGTCGGGCTGGAATGTTTCAAACTACGGGTCTGAATCGGAAGTCATCAGGAACATTAGAGAGCATATTACTCAACAGTTGTTGAACCCAGAAGTGGATACTGAGGAGTTGCCAGAAGTGGATGATGGCCAGTTGGTGAACCCAGAAGTGAATGTAGCCAAATTTCCTGTTGGAATTCAGTCTCGGGTTGAAGATTTGGTTCGTCATCTAGATTTTGGGTCAGACGAGGTACGAATAGTTGGAATTTTTGGGGTGCTGGGAATTGGCAAATCAACGGTAGCCAAAGCTATGTATGACCAATATCGTAATAGCTTTGACGGTGCATGTTTCCTTGTCAGTGTGAGGGAGACTATAAAAAAACGGGATGGTCTGATTAGTTTGCAGGAACAAGTTCATGATATCTTGAAAACGAAGATAAACGCCGGAGTTGTTTCTGCAGGTGTTCATCAAATCAAAAGAGAAAGAAGGGTACTAGTCATAATTGATGACATAGATGAAAAAAAACAACTAGATCAATTAGACATAAATCGTGACAGGTTTGGTTCTGGAAGTAGAATTGTCGTAATAACAAGAGAGGAAGGTTTGCTAAAGCAACTTCAAGTGGATACGACATATTCGCCACAACCGATGAACAAAGAGGAAGCGATTGAGCTCTTTAGTTGGCATGCTTTTGGGAAGTGTTCTCCTGATGAAAAATATTCTGAACACTCAAGAACTGTTGTTACTTTTTTGGGGGGTTTGCCACTGCTTCTTACAGTTATAGGTCATGATCTTTATGGAAAAGGCATGAAAAAGTGGCAATTGTTGAAGAGATGTATTGCAACCGAGGAAACTAGAATTCTGAAAGAGTTATTTCTGTATTGTTATTCCCTCTTTCCAACAGGTTATGAATTCAGAAAAGACGAGTTGGTCCAGTTGTGGATAGCTGAAGGCTTTATAGTAGACAAGTATCCAGAGAGGATGGAGGATACTGGTATTTCGTATTTCAATTACTTGGAGAACGAAGGTTATTTTTTGCTCTCAAGATGTGATTTTAGAGTGGATTTTGATTCGGTGTCCTCGGTGACTTCCAATTCCAACAACTTGTACAAGATAAATACTGACAAGGTTGATGTTTCAAAAAATAAAACTTCTCGGGATCATTATTCCAGAGGCGCGAATGCGGTTTCTGTTTCAGAAAACATAGACTCTCAGGATGATTCTTTCAGAGCAGTGGATCCGGTTTCTATCTCACAACACACAGTTTCTCAGGCTGAGGATGAGTTAAAAGCGCTGAATGAGCCTTCTGTTTCAGAAACCATAGTTTCTGCGGTTGATAGTTATTTTGGAGCCCTGGATATGGTTTCTGTTTCAGAAAACACACTTTCCTGGGCTACTGATTTGAGAGCCAGAGAAATGGTTTCTGTTTCAGGGTACACAGCTTCTGAGCTTGATTATTTTAGAGCCGTGGATGAAAATATGGATGGAGCCTCTGCAACTACACGACATTTGTCTTTGACGTTTAATGACATTGATGATATGAGTTTTGGGGTTGTTGAAAAACTGAAGGAACTGCGCACACTGCTTTTACTCTTGGATAGTGGTTCTTCCATTACACATGTTCCTCGTAATTTGTTTTGGAGCTTAAAGTTCTTGAGAACATTGAAGTTGAGTGGAACACTCGTTTCTGAATTGCCAAGCTCCCTTCGGAATGTCAAAGAATTGCGATATCTTGATGTCTCTTACACACCCATTACACGGTTGCCTGAATCAGTCACATATCTTCATAATTTACAAACCTTAAAACTTAGAGGTTGTGTACAATTTGATCAGTTACCAAAGGATCTGGAGAAGCTAACCAAGCTACGCCATATTGAACTTGATATCATGCGACAATTGGATTCCTTGCCTGCAAACTTGGGGAACTTGACTCACCTTCAGACACTGTCAGCATTTCTTGTTGATAAAGATGATGGGTGCCATATTGGACAGTTGAAGAATTTAAATGATCTCAAAGGAGCACTCTGCATTTCAAGGCTTGAAAACGTGATGAAAGTGGAAGAGGCTGAGGAAGCTTCATTGGTTCAAAAGAAATGTCTCGATACGTTGGAGCTCCGGTGGAGTCATCTGTTGTCTACAAATAAAGAGGAGCAAGAAGAAATCCTCGAATGTCTTGAACCCCATTGTGGCTTAAAAGAGTTGCAAATACAATACTATGGTGGGTCAAAACTTCCAACTTGGATTAGCAATCCATCTTTTGCTGTCCTTGAAGCTGTTACCCTCTATAGATGCAAAAATTGTATACTTCTCCCATCCATGGGGCAATTACCAGCGCTTAAAGTGCTTTCCATTATGGAGATGAATGAGGTGACAGAAATCAATCATCAATTTTTCAGAAATGGCCTAGTTGATGATCAAGCATTCATTGCATTTCCAAAACTTGAGAGACTAGAAATTGACATTATGCTCAATTTCAAAGAGTGGAAGGAGGTTCAGAAAGGTGACTTGCCATATCTACTTAAGCTCACAGTGGACTCTTGCCCAGAACTTGTAACACTTCCACCACTTTCAAGCCTAAATTCACTCAAGCATTTGGAATTTAGGAGTTGTCCGAAGCTTCTGCCCAGTGATCAACTACCAGATTCCCTTGAATCGTTGATGATTGTAGATTGCCCTCGAATCAAAGAATGGTTCCATGAGGGGGATGGTGAAGAATGGAGCAAGAAGCATCGTAGCATATGGCTTGATGAAGAAGAGATAAAGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 ko04016 ko04075 ko04931 map04014 map04016 map04075 map04931
Pfam Domains
Protein Families
LRR_8 NB-ARC PP2C TIR VQ

Protein Analysis

1073

Amino Acids

122.16

Weight (kDa)

5.15

Isoelectric Point (pI)

45.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 19 - 186 7e-54 TIR domain
TIR_2 PF13676 22 - 118 2.4e-14 TIR domain
NB-ARC PF00931 219 - 382 1.2e-16 NB-ARC domain
WHD_DRP PF23559 449 - 496 6.3e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 720 - 996 1.9e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 813 - 938 1.1e-38 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 900 - 1017 1e-05 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018443)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g16070 FvH4_5g16070 FvH4_5g16070 FvH4_5g16070 FvH4_5g16070
rosa_rugosa Rorug07G0132500 Rorug07G0132600
rosa_samantha Rh7AG265500 Rh7CG282200
rosa_wichuraiana Rw7G022730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 182, 902
AasI GACNNNNNNGTC 1 cut(s) 1382
Acc16I TGCGCA 1 cut(s) 2030
Acc36I ACCTGC 2 cut(s) 182, 902
AccB1I GGYRCC 1 cut(s) 2430
AccI GTMKAC 3 cut(s) 1416, 2588, 2755
AccII CGCG 1 cut(s) 1631
AciI CCGC 4 cut(s) 21, 97, 1637, 1784
AclWI GGATC 4 cut(s) 1620, 1685, 1698, 2304
AcoI YGGCCR 3 cut(s) 3, 316, 601
AcsI RAATTY 9 cut(s) 472, 635, 648, 717, 1311, 1364, 2452, 3031, 3050
AcuI CTGAAG 5 cut(s) 339, 483, 1422, 2039, 2375
AfaI GTAC 6 cut(s) 59, 705, 945, 1562, 1889, 2274
AfeI AGCGCT 3 cut(s) 413, 1746, 2787
AfiI CCNNNNNNNGG 7 cut(s) 568, 1813, 2211, 2639, 2770, 2771, 3154
AflII CTTAAG 1 cut(s) 2972
AflIII ACRYGT 1 cut(s) 2071
AhlI ACTAGT 1 cut(s) 946
AjnI CCWGG 2 cut(s) 1806, 1841
AjuI GAANNNNNNNTTGG 2 cut(s) 312, 344
Alw21I GWGCWC 3 cut(s) 1128, 2476, 2568
Alw26I GTCTC 5 cut(s) 660, 815, 2197, 2555, 2893
AlwI GGATC 4 cut(s) 1620, 1685, 1698, 2304
AlwNI CAGNNNCTG 2 cut(s) 1898, 2398
Ama87I CYCGRG 2 cut(s) 657, 1608
Aor51HI AGCGCT 3 cut(s) 413, 1746, 2787
AoxI GGCC 4 cut(s) 3, 316, 601, 2854
ApeKI GCWGC 2 cut(s) 12, 467
ApoI RAATTY 9 cut(s) 472, 635, 648, 717, 1311, 1364, 2452, 3031, 3050
ArsI GACNNNNNNTTYG 4 cut(s) 488, 520, 2533, 2565
Asp700I GAANNNNTTC 1 cut(s) 864
AspLEI GCGC 5 cut(s) 414, 1631, 1747, 2031, 2788
AspS9I GGNCC 2 cut(s) 261, 1384
AsuHPI GGTGA 8 cut(s) 206, 373, 622, 1549, 2378, 2833, 2966, 3173
AsuII TTCGAA 1 cut(s) 245
AvaI CYCGRG 2 cut(s) 657, 1608
AvaII GGWCC 2 cut(s) 261, 1384
BalI TGGCCA 3 cut(s) 5, 318, 603
BamHI GGATCC 1 cut(s) 1690
BanI GGYRCC 1 cut(s) 2430
BanII GRGCYC 3 cut(s) 1128, 1807, 2568
BarI GAAGNNNNNNTAC 2 cut(s) 50, 82
BbsI GAAGAC 3 cut(s) 58, 136, 373
Bbv12I GWGCWC 3 cut(s) 1128, 2476, 2568
BbvCI CCTCAGC 2 cut(s) 1728, 2520
BbvI GCAGC 2 cut(s) 24, 454
BceAI ACGGC 2 cut(s) 138, 1904
BcgI CGANNNNNNTGC 4 cut(s) 459, 493, 3055, 3089
BciT130I CCWGG 2 cut(s) 1808, 1843
BciVI GTATCC 4 cut(s) 565, 1072, 1434, 1435
BclI TGATCA 3 cut(s) 2281, 2866, 3082
BcoDI GTCTC 5 cut(s) 660, 815, 2197, 2555, 2893
BcuI ACTAGT 1 cut(s) 946
BfaI CTAG 7 cut(s) 275, 683, 947, 983, 1308, 2858, 2903
BfmI CTRYAG 3 cut(s) 200, 909, 2737
BfoI RGCGCY 3 cut(s) 415, 1748, 2789
BfrI CTTAAG 1 cut(s) 2972
BfuAI ACCTGC 2 cut(s) 182, 902
BfuI GTATCC 4 cut(s) 565, 1072, 1434, 1435
BglII AGATCT 1 cut(s) 225
BisI GCNGC 4 cut(s) 13, 22, 97, 468
BlsI GCNGC 4 cut(s) 14, 23, 98, 469
Bme1390I CCNGG 2 cut(s) 1808, 1843
Bme18I GGWCC 2 cut(s) 261, 1384
BmeT110I CYCGRG 2 cut(s) 657, 1608
BmgT120I GGNCC 2 cut(s) 261, 1384
BmiI GGNNCC 5 cut(s) 1692, 1804, 1942, 2432, 3146
BmrFI CCNGG 2 cut(s) 1808, 1843
BmrI ACTGGG 1 cut(s) 3072
BmsI GCATC 2 cut(s) 2732, 3190
BmuI ACTGGG 1 cut(s) 3072
BoxI GACNNNNGTC 1 cut(s) 1963
BpiI GAAGAC 3 cut(s) 58, 136, 373
BplI GAGNNNNNCTC 2 cut(s) 439, 471
BpmI CTGGAG 2 cut(s) 159, 2321
Bpu10I CCTNAGC 2 cut(s) 1728, 2520
Bpu14I TTCGAA 1 cut(s) 245
BpuEI CTTGAG 6 cut(s) 91, 1168, 1480, 2128, 2915, 3023
BsaJI CCNNGG 7 cut(s) 42, 1299, 1533, 1806, 1842, 1920, 2769
BsaWI WCCGGW 2 cut(s) 1693, 2568
BsaXI ACNNNNNCTCC 4 cut(s) 132, 162, 2555, 2585
Bsc4I CCNNNNNNNGG 7 cut(s) 568, 1813, 2211, 2639, 2770, 2771, 3154
Bse1I ACTGG 4 cut(s) 604, 1387, 1450, 3078
Bse3DI GCAATG 1 cut(s) 2877
BseBI CCWGG 2 cut(s) 1808, 1843
BseDI CCNNGG 7 cut(s) 42, 1299, 1533, 1806, 1842, 1920, 2769
BseLI CCNNNNNNNGG 7 cut(s) 568, 1813, 2211, 2639, 2770, 2771, 3154
BseMI GCAATG 1 cut(s) 2877
BseMII CTCAG 7 cut(s) 164, 567, 1679, 1719, 1736, 1890, 2511
BseNI ACTGG 4 cut(s) 604, 1387, 1450, 3078
BseRI GAGGAG 3 cut(s) 293, 593, 2615
BseXI GCAGC 2 cut(s) 24, 454
BseYI CCCAGC 1 cut(s) 730
Bsh1236I CGCG 1 cut(s) 1631
BshFI GGCC 4 cut(s) 5, 318, 603, 2856
BshNI GGYRCC 1 cut(s) 2430
BsiHKAI GWGCWC 3 cut(s) 1128, 2476, 2568
BsiHKCI CYCGRG 2 cut(s) 657, 1608
BsiSI CCGG 3 cut(s) 897, 1694, 2569
BslI CCNNNNNNNGG 7 cut(s) 568, 1813, 2211, 2639, 2770, 2771, 3154
BsmAI GTCTC 5 cut(s) 660, 815, 2197, 2555, 2893
BsmI GAATGC 2 cut(s) 1639, 2873
BsnI GGCC 4 cut(s) 5, 318, 603, 2856
BsoBI CYCGRG 2 cut(s) 657, 1608
Bsp119I TTCGAA 1 cut(s) 245
Bsp1286I GDGCHC 4 cut(s) 1128, 1807, 2476, 2568
Bsp1407I TGTACA 2 cut(s) 1560, 2272
Bsp19I CCATGG 1 cut(s) 2769
BspACI CCGC 4 cut(s) 21, 97, 1637, 1784
BspANI GGCC 4 cut(s) 5, 318, 603, 2856
BspCNI CTCAG 7 cut(s) 165, 568, 1678, 1720, 1735, 1891, 2512
BspFNI CGCG 1 cut(s) 1631
BspHI TCATGA 2 cut(s) 868, 1240
BspLI GGNNCC 5 cut(s) 1692, 1804, 1942, 2432, 3146
BspMAI CTGCAG 2 cut(s) 204, 913
BspMI ACCTGC 2 cut(s) 182, 902
BspPI GGATC 4 cut(s) 1620, 1685, 1698, 2304
BspQI GCTCTTC 1 cut(s) 402
BspT104I TTCGAA 1 cut(s) 245
BspT107I GGYRCC 1 cut(s) 2430
BspTI CTTAAG 1 cut(s) 2972
BsrDI GCAATG 1 cut(s) 2877
BsrGI TGTACA 2 cut(s) 1560, 2272
BsrI ACTGG 4 cut(s) 604, 1387, 1450, 3078
BssECI CCNNGG 7 cut(s) 42, 1299, 1533, 1806, 1842, 1920, 2769
BssNAI GTATAC 1 cut(s) 2756
BssT1I CCWWGG 1 cut(s) 2769
Bst1107I GTATAC 1 cut(s) 2756
Bst2UI CCWGG 2 cut(s) 1808, 1843
Bst6I CTCTTC 6 cut(s) 210, 402, 427, 1277, 2508, 3201
BstAFI CTTAAG 1 cut(s) 2972
BstAPI GCANNNNNTGC 1 cut(s) 2879
BstAUI TGTACA 2 cut(s) 1560, 2272
BstBI TTCGAA 1 cut(s) 245
BstC8I GCNNGC 3 cut(s) 285, 1140, 2364
BstDEI CTNAG 8 cut(s) 173, 576, 1665, 1722, 1728, 1899, 2261, 2520
BstDSI CCRYGG 2 cut(s) 1920, 2769
BstFNI CGCG 1 cut(s) 1631
BstH2I RGCGCY 3 cut(s) 415, 1748, 2789
BstHHI GCGC 5 cut(s) 414, 1631, 1747, 2031, 2788
BstMAI GTCTC 5 cut(s) 660, 815, 2197, 2555, 2893
BstMWI GCNNNNNNNGC 9 cut(s) 18, 21, 420, 1753, 2035, 2314, 2525, 2794, 2879
BstNI CCWGG 2 cut(s) 1808, 1843
BstNSI RCATGY 3 cut(s) 801, 1142, 2075
BstPAI GACNNNNGTC 1 cut(s) 1963
BstSCI CCNGG 2 cut(s) 1806, 1841
BstSFI CTRYAG 3 cut(s) 200, 909, 2737
BstUI CGCG 1 cut(s) 1631
BstV1I GCAGC 2 cut(s) 24, 454
BstV2I GAAGAC 3 cut(s) 58, 136, 373
BstX2I RGATCY 3 cut(s) 225, 1690, 2296
BstXI CCANNNNNNTGG 1 cut(s) 1870
BstYI RGATCY 3 cut(s) 225, 1690, 2296
BstZ17I GTATAC 1 cut(s) 2756
BsuI GTATCC 4 cut(s) 565, 1072, 1434, 1435
BsuRI GGCC 4 cut(s) 5, 318, 603, 2856
BtgI CCRYGG 2 cut(s) 1920, 2769
BtsI GCAGTG 3 cut(s) 1217, 1692, 2033
BtsIMutI CAGTG 7 cut(s) 817, 1217, 1692, 2033, 2396, 2988, 3085
BveI ACCTGC 2 cut(s) 182, 902
Cac8I GCNNGC 3 cut(s) 285, 1140, 2364
CaiI CAGNNNCTG 2 cut(s) 1898, 2398
CciI TCATGA 2 cut(s) 868, 1240
CfoI GCGC 5 cut(s) 414, 1631, 1747, 2031, 2788
Cfr13I GGNCC 2 cut(s) 261, 1384
CseI GACGC 1 cut(s) 313
Csp6I GTAC 6 cut(s) 58, 704, 944, 1561, 1888, 2273
CviQI GTAC 6 cut(s) 58, 704, 944, 1561, 1888, 2273
DdeI CTNAG 8 cut(s) 173, 576, 1665, 1722, 1728, 1899, 2261, 2520
DraI TTTAAA 1 cut(s) 2457
DrdI GACNNNNNNGTC 1 cut(s) 1382
DseDI GACNNNNNNGTC 1 cut(s) 1382
EaeI YGGCCR 3 cut(s) 3, 316, 601
Eam1104I CTCTTC 6 cut(s) 210, 402, 427, 1277, 2508, 3201
EarI CTCTTC 6 cut(s) 210, 402, 427, 1277, 2508, 3201
Ecl136II GAGCTC 2 cut(s) 1126, 2566
Eco130I CCWWGG 1 cut(s) 2769
Eco24I GRGCYC 3 cut(s) 1128, 1807, 2568
Eco32I GATATC 3 cut(s) 874, 2183, 2338
Eco47I GGWCC 2 cut(s) 261, 1384
Eco47III AGCGCT 3 cut(s) 413, 1746, 2787
Eco53kI GAGCTC 2 cut(s) 1126, 2566
Eco57I CTGAAG 5 cut(s) 339, 483, 1422, 2039, 2375
Eco88I CYCGRG 2 cut(s) 657, 1608
EcoICRI GAGCTC 2 cut(s) 1126, 2566
EcoRI GAATTC 3 cut(s) 648, 1311, 1364
EcoRII CCWGG 2 cut(s) 1806, 1841
EcoRV GATATC 3 cut(s) 874, 2183, 2338
EcoT14I CCWWGG 1 cut(s) 2769
EcoT38I GRGCYC 3 cut(s) 1128, 1807, 2568
ErhI CCWWGG 1 cut(s) 2769
FauNDI CATATG 1 cut(s) 3191
FbaI TGATCA 3 cut(s) 2281, 2866, 3082
FblI GTMKAC 3 cut(s) 1416, 2588, 2755
Fnu4HI GCNGC 4 cut(s) 13, 22, 97, 468
FriOI GRGCYC 3 cut(s) 1128, 1807, 2568
Fsp4HI GCNGC 4 cut(s) 13, 22, 97, 468
FspBI CTAG 7 cut(s) 275, 683, 947, 983, 1308, 2858, 2903
FspI TGCGCA 1 cut(s) 2030
GlaI GCGC 5 cut(s) 413, 1630, 1746, 2030, 2787
GluI GCNGC 4 cut(s) 13, 22, 97, 468
GsaI CCCAGC 1 cut(s) 734
GsuI CTGGAG 2 cut(s) 159, 2321
HaeII RGCGCY 3 cut(s) 415, 1748, 2789
HaeIII GGCC 4 cut(s) 5, 318, 603, 2856
HapII CCGG 3 cut(s) 897, 1694, 2569
HgaI GACGC 1 cut(s) 313
HhaI GCGC 5 cut(s) 414, 1631, 1747, 2031, 2788
Hin6I GCGC 5 cut(s) 412, 1629, 1745, 2029, 2786
HinP1I GCGC 5 cut(s) 412, 1629, 1745, 2029, 2786
HindIII AAGCTT 2 cut(s) 2526, 3068
HpaII CCGG 3 cut(s) 897, 1694, 2569
HphI GGTGA 8 cut(s) 206, 373, 622, 1549, 2378, 2833, 2966, 3173
Hpy166II GTNNAC 7 cut(s) 613, 1417, 1890, 2273, 2589, 2756, 2986
Hpy8I GTNNAC 7 cut(s) 613, 1417, 1890, 2273, 2589, 2756, 2986
Hpy99I CGWCG 2 cut(s) 239, 329
HpyCH4IV ACGT 3 cut(s) 1973, 2499, 2558
HpyF10VI GCNNNNNNNGC 9 cut(s) 18, 21, 420, 1753, 2035, 2314, 2525, 2794, 2879
HpyF3I CTNAG 8 cut(s) 173, 576, 1665, 1722, 1728, 1899, 2261, 2520
HpySE526I ACGT 3 cut(s) 1973, 2499, 2558
HspAI GCGC 5 cut(s) 412, 1629, 1745, 2029, 2786
Ksp22I TGATCA 3 cut(s) 2281, 2866, 3082
LguI GCTCTTC 1 cut(s) 402
Lsp1109I GCAGC 2 cut(s) 24, 454
LweI GCATC 2 cut(s) 2732, 3190
MaeI CTAG 7 cut(s) 275, 683, 947, 983, 1308, 2858, 2903
MaeII ACGT 3 cut(s) 1973, 2499, 2558
MaeIII GTNAC 9 cut(s) 1004, 1195, 1537, 2227, 2286, 2728, 2821, 2954, 3004
MfeI CAATTG 2 cut(s) 1274, 2348
MflI RGATCY 3 cut(s) 225, 1690, 2296
MhlI GDGCHC 4 cut(s) 1128, 1807, 2476, 2568
MlsI TGGCCA 3 cut(s) 5, 318, 603
MluNI TGGCCA 3 cut(s) 5, 318, 603
MlyI GAGTC 7 cut(s) 150, 191, 227, 1655, 2377, 2584, 2981
MmeI TCCRAC 6 cut(s) 625, 694, 1376, 1575, 2541, 2711
Mox20I TGGCCA 3 cut(s) 5, 318, 603
MroXI GAANNNNTTC 1 cut(s) 864
MscI TGGCCA 3 cut(s) 5, 318, 603
MseI TTAA 8 cut(s) 1739, 1977, 2099, 2255, 2456, 2645, 2790, 2973
Msp20I TGGCCA 3 cut(s) 5, 318, 603
MspCI CTTAAG 1 cut(s) 2972
MspI CCGG 3 cut(s) 897, 1694, 2569
MspR9I CCNGG 2 cut(s) 1808, 1843
MunI CAATTG 2 cut(s) 1274, 2348
Mva1269I GAATGC 2 cut(s) 1639, 2873
MvaI CCWGG 2 cut(s) 1808, 1843
MvnI CGCG 1 cut(s) 1631
MwoI GCNNNNNNNGC 9 cut(s) 18, 21, 420, 1753, 2035, 2314, 2525, 2794, 2879
NcoI CCATGG 1 cut(s) 2769
NdeI CATATG 1 cut(s) 3191
NlaIV GGNNCC 5 cut(s) 1692, 1804, 1942, 2432, 3146
NmuCI GTSAC 5 cut(s) 1004, 1537, 2227, 2821, 2954
NsbI TGCGCA 1 cut(s) 2030
NspI RCATGY 3 cut(s) 801, 1142, 2075
NspV TTCGAA 1 cut(s) 245
PaeI GCATGC 1 cut(s) 1142
PagI TCATGA 2 cut(s) 868, 1240
PaqCI CACCTGC 2 cut(s) 182, 902
PciI ACATGT 1 cut(s) 2071
PciSI GCTCTTC 1 cut(s) 402
PcsI WCGNNNNNNNCGW 1 cut(s) 1097
PctI GAATGC 2 cut(s) 1639, 2873
PdmI GAANNNNTTC 1 cut(s) 864
PfeI GAWTC 8 cut(s) 509, 1523, 1673, 2222, 2354, 3095, 3104, 3132
PflFI GACNNNGTC 1 cut(s) 2398
PkrI GCNGC 4 cut(s) 14, 23, 98, 469
PleI GAGTC 7 cut(s) 149, 190, 226, 1655, 2377, 2583, 2981
PpsI GAGTC 7 cut(s) 149, 190, 226, 1655, 2377, 2583, 2981
PscI ACATGT 1 cut(s) 2071
PshAI GACNNNNGTC 1 cut(s) 1963
Psp124BI GAGCTC 2 cut(s) 1128, 2568
Psp6I CCWGG 2 cut(s) 1806, 1841
PspFI CCCAGC 1 cut(s) 730
PspGI CCWGG 2 cut(s) 1806, 1841
PspN4I GGNNCC 5 cut(s) 1692, 1804, 1942, 2432, 3146
PspPI GGNCC 2 cut(s) 261, 1384
PsrI GAACNNNNNNTAC 2 cut(s) 1180, 1212
PstI CTGCAG 2 cut(s) 204, 913
PstNI CAGNNNCTG 2 cut(s) 1898, 2398
PsuI RGATCY 3 cut(s) 225, 1690, 2296
PsyI GACNNNGTC 1 cut(s) 2398
RsaI GTAC 6 cut(s) 59, 705, 945, 1562, 1889, 2274
RsaNI GTAC 6 cut(s) 58, 704, 944, 1561, 1888, 2273
SacI GAGCTC 2 cut(s) 1128, 2568
SapI GCTCTTC 1 cut(s) 402
SaqAI TTAA 8 cut(s) 1739, 1977, 2099, 2255, 2456, 2645, 2790, 2973
SatI GCNGC 4 cut(s) 13, 22, 97, 468
Sau96I GGNCC 2 cut(s) 261, 1384
SchI GAGTC 7 cut(s) 150, 191, 227, 1655, 2377, 2584, 2981
ScrFI CCNGG 2 cut(s) 1808, 1843
SduI GDGCHC 4 cut(s) 1128, 1807, 2476, 2568
SfaNI GCATC 2 cut(s) 2732, 3190
SfcI CTRYAG 3 cut(s) 200, 909, 2737
SfuI TTCGAA 1 cut(s) 245
SinI GGWCC 2 cut(s) 261, 1384
SmiI ATTTAAAT 1 cut(s) 2457
SmlI CTYRAG 7 cut(s) 70, 1183, 1495, 2107, 2894, 2972, 3038
SmoI CTYRAG 7 cut(s) 70, 1183, 1495, 2107, 2894, 2972, 3038
SpeI ACTAGT 1 cut(s) 946
SphI GCATGC 1 cut(s) 1142
SsiI CCGC 4 cut(s) 21, 97, 1637, 1784
SspI AATATT 1 cut(s) 1172
SspMI CTAG 7 cut(s) 275, 683, 947, 983, 1308, 2858, 2903
SstI GAGCTC 2 cut(s) 1128, 2568
StyD4I CCNGG 2 cut(s) 1806, 1841
StyI CCWWGG 1 cut(s) 2769
SwaI ATTTAAAT 1 cut(s) 2457
TaiI ACGT 3 cut(s) 1976, 2502, 2561
TaqI TCGA 6 cut(s) 221, 245, 331, 2553, 2619, 3130
TatI WGTACW 2 cut(s) 1560, 2272
TauI GCSGC 2 cut(s) 24, 99
TfiI GAWTC 8 cut(s) 509, 1523, 1673, 2222, 2354, 3095, 3104, 3132
Tru1I TTAA 8 cut(s) 1739, 1977, 2099, 2255, 2456, 2645, 2790, 2973
Tru9I TTAA 8 cut(s) 1739, 1977, 2099, 2255, 2456, 2645, 2790, 2973
TscAI CASTG 7 cut(s) 817, 1224, 1692, 2040, 2403, 2988, 3085
TseFI GTSAC 5 cut(s) 1004, 1537, 2227, 2821, 2954
TseI GCWGC 2 cut(s) 12, 467
Tsp45I GTSAC 5 cut(s) 1004, 1537, 2227, 2821, 2954
TspRI CASTG 7 cut(s) 817, 1224, 1692, 2040, 2403, 2988, 3085
Tth111I GACNNNGTC 1 cut(s) 2398
Vha464I CTTAAG 1 cut(s) 2972
VpaK11BI GGWCC 2 cut(s) 261, 1384
XapI RAATTY 9 cut(s) 472, 635, 648, 717, 1311, 1364, 2452, 3031, 3050
XbaI TCTAGA 2 cut(s) 274, 682
XceI RCATGY 3 cut(s) 801, 1142, 2075
XcmI CCANNNNNNNNNTGG 1 cut(s) 3155
XmiI GTMKAC 3 cut(s) 1416, 2588, 2755
XmnI GAANNNNTTC 1 cut(s) 864
XspI CTAG 7 cut(s) 275, 683, 947, 983, 1308, 2858, 2903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.