Rh7AG265500

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0018443
Physical Location & Seq
Forward (+)
27386731 .. 27393845
7115 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG265500.1

Sequence Viewer

Length: 3225 bp
ATGGCCAGCAGCAGCAGAAGCAGAAGCAGAAGCGGTGCCCCATTTCCTTCATCCTCGGAATTATGGAAGTACGATGTCTTCTTTAGCTTTAGAGGTTCAGACACACGCCGCGGCTTCACAGACCATCTCTACATGGCGTTGGAACAAGCTGGAGTCCGCGTCTTTCGTGATGAGCAACTAGAGAGGGGGTCTGAATTAACTAGTGTGCTCAAAGCAATAGAAGAGTCGAAGATCTCTGTCGTCGTCTTTTCGCAGAATTATGCAAGTTCCGGATGGTGTCTAGAGGAGCTGGTGATGATCATGGGGAGTAAATCATGGTTTGGCCAAGTGGTCGTGCCAGTATTCTATGATGTTGATCCTTCAGAGGTGAGACATCAGAGGGGTAGTTTTGGAGATGCATTTAGCAGACATGAAGAGAGCGGCGGGTACGATTTGGAACAGATACGGAGGTGGAGAAGTGCTCTATCTGAAGCTGCAAGTTTGTCGGGCTGGCATGTTTCAAACGACAGGCTTGAATCGGAAATCGTGAGGGAAATTACAGAGCATATTTTTCAACAGTTGTTGAACCCAGAAGTGGATGTTGAAGAGTTGCCAGATGTGGATGATGGACAGTTGGTGAACCCAGAAGTGAATGTGGCGAGATTTCCTGTTGGAATTAAGTCTCGGGTGGAAGATTTAGTTCGTCATCTAGATGTTGGGTCAGACGAGGTACGAATAGTTGGAATTTTTGGGGTGCTGGGAATTGGCAAAACGACGGTTGCCAAAGCTATGTATGACCAATATCATAATAGCTTTGATGGTGCATGTTTCCTTGTCAATGTGAGGGACACTATAAAAGAATCGAATGGTCTGATTAGTTTGCAGGAACAACTTCATGATATCTTGGAAACAAAGACAAATGTAGGAGTTGTTTCTGCAGGGGTTCATCAGATCAAAATAGAAAGAAGGGTACTAGTCATAATTGACGACATAGATGAAAAAGAGCAACTAGATCAATTGGCTATAAATCGTGACATATTTGGTTCTGGAAGTAGAATTGTCATAATAACAAGAGAGGAAGGTTTGCTAAAGCAACTTAAAGTGGATACAACATATTCGCCACGACCAATGAACAAAGAGGAAGCGATTGAGCTCTTTAGTTGGCATGCCTTTGGGAAGTGTTCTCCTGATGAAAAATATTCTGAACACTCAAGAACTGTGGTTGCTTTTTTGGGGGGTTTGCCACTGCTTCTTACAGCTATAGGTCATGATCTTTATGGAAAAGGCATGAAAAAGTGGCAACTGTTGAAGAGATGTATTGCAAACGAGGAAACTAGGATTTTGAAAGAGTTATTTCTGTATTGTTATTCCCTCTTTCCAAGAGGTTATGAATTCAGAAAAGATGAGTTGGTGCAATTGTGGATAGCTGAAGGCTTTATAGTAGACAATTATGCAGAGAGGATGGAGGATACTGGTATTTCGTATTTCAATTACTTGGAGAACGAAGGTTATTTTTTGCTTTCAAGATGTGATTTTAGAGTGGAATTTGATTCGGTGTCCGCGGTGACTTGCAATTCCAACAACTTGTACAAGATAAATACTGACAAGGTAGATGTTTCAAAAAACAAAACTTCTCAGGATCATTATTCCAGAGGTGCGAATGTGGACTCTCGGGATGATTCTTTCAGAGCAGTGGATCCGGTTTCTATCTCACAACACACAGTTTCTCAGGCTGAGGATGAATTAAAAGCGGTGGATGAGCCTTCTGTTTCAGAAAACATAATTTCTGCGGTTGATAGTTATTTTGGAGCCCTGGATATGGTTTCTGTTTCAGAAAACACACTTTCCAGGGCTAATGATTTGAGAGCCAGGGAAATGGTTTCTGATTTAGGGTACACAGCTTCTGAGCTTGATTATTTTAGAGCCGTGGATGCAAATATGGATGGAGCCTCTGCAACTACACGACACTTGTCTTTGACGTTTAAGGACATTGATGAGATGAGTTTTAGGGTTGTTGAAAAACTGAAGGAACTGCGCACACTGCTTTTGCTCTCGGATAGTGGATCTTCCATTACACATGTTCCTCGTAATTTGTTTTGGAGCTTAAAGTTCTTGAGAACATTGAAGTTGAGTGGAACACTCATTTCTGAATTGCCGAGCTCCATTCGGAATGTCAAAGAATTGCGATATCTTGATGTCTCTTACACACCCATTACACGGTTGCCTGAATCAGTAACATATCTTCAAAATTTACAAACCTTAAAACTTAGAGGTTGTGTAGAATTTGATCAGTTACCAAAGGATCTGGAGAAGCTAACCAAGCTACGCCATATTGAACTTGATATCATGCGGCAATTGGATTCCTTGCCTGCAAACTTGGGAAACTTGACTCACCTTCAGACACTGTCAGCATTTCTTGTTGATAAAGATGATGGGTGCCATATTGGACAGTTGAAGAATTTAAATGATCTCAAAGGAGCACTCTGCATTTCAAGGCTTGAAAACGTGATGAAAGTGGAAGAGGCCGAGGAAGCTTCTTTGGTTCAAAAGAAATGTCTCGACATGTTGGAGCTCCGGTGGAGTCATCTGTTGTCTACGAATAAAGAGGAGCAAGAAGAAATCCTCGAATATCTTGAACCCCATTGTGGCCTAAAAGAGTTGCAAATACAATACTATGGTGGGTCAAAACTTCCAACTTGGATTAGCAATCCATCTTTTGCTGTCCTTGAAGCTGTTACCCTCTATAGATGCAAAAATTGTATACTTCTCCCATCCATGGGGCGATTACCGGCACTTAAAGTGCTTTCCATTATTGAGATGAATGAGGTGACAGAAATCAATCATCAATTTTTCAGAAATGGCCTAGATGATCAAGCATTCATTGCATTTCCAAAACTTGAGAGGCTAGAAATTGACATTATGCTCAATTTGAAAGAGTGGAAGGCGGTTCTGAAAGGCGACTTGCCATCTCTACTTAAGCTCACAGTGGACTCTTGCCCAGAACTTGCAACACTTCCACCACTTTCAAGCCTAAATTCACTCAAGCATTTGGAATTTAGGAGTTGTCCAAAGCTTCTGCCCAGTGATCAACTACCAGATTCCCTTGAATCATTGATGATTGTAGATTGCCCTCGAATCAAAGAATGGTTCCATGAGGGGGATGGTGAAGAATGGAGCAAGAAGCATCGTAGCATATGGCTTGATGAAGAAGAGGCAAGTAAAAATGAAACTCTGGTACATTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 ko04016 ko04075 ko04931 map04014 map04016 map04075 map04931
Pfam Domains
Protein Families
LRR_8 NB-ARC PP2C TIR VQ

Protein Analysis

1074

Amino Acids

122.1

Weight (kDa)

5.12

Isoelectric Point (pI)

45.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 23 - 188 9.4e-49 TIR domain
TIR_2 PF13676 26 - 121 1.9e-13 TIR domain
NB-ARC PF00931 221 - 384 1.4e-16 NB-ARC domain
WHD_DRP PF23559 451 - 498 1.8e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 715 - 990 9.4e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 808 - 933 1.4e-37 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 895 - 1011 2.6e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018443)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g16070 FvH4_5g16070 FvH4_5g16070 FvH4_5g16070 FvH4_5g16070
rosa_rugosa Rorug07G0132500 Rorug07G0132600
rosa_samantha Rh7AG265500 Rh7CG282200
rosa_wichuraiana Rw7G022730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2015
AccB1I GGYRCC 2 cut(s) 35, 2415
AccBSI CCGCTC 1 cut(s) 420
AccI GTMKAC 3 cut(s) 1422, 2573, 2740
AccII CGCG 3 cut(s) 111, 159, 1541
AccIII TCCGGA 1 cut(s) 269
AclWI GGATC 6 cut(s) 350, 1626, 1670, 1683, 2050, 2289
AcoI YGGCCR 2 cut(s) 3, 322
AcsI RAATTY 8 cut(s) 723, 1370, 1523, 2227, 2261, 2437, 3013, 3032
AcuI CTGAAG 5 cut(s) 345, 489, 1428, 2024, 2360
AfaI GTAC 7 cut(s) 71, 428, 711, 951, 1568, 1874, 3216
AfiI CCNNNNNNNGG 7 cut(s) 574, 1798, 2196, 2624, 2755, 2756, 3136
AflII CTTAAG 1 cut(s) 2954
AflIII ACRYGT 2 cut(s) 2056, 2541
AhlI ACTAGT 2 cut(s) 200, 952
AjnI CCWGG 3 cut(s) 1791, 1826, 1847
Alw21I GWGCWC 6 cut(s) 210, 463, 1134, 2141, 2461, 2553
Alw26I GTCTC 4 cut(s) 364, 666, 2182, 2540
AlwI GGATC 6 cut(s) 350, 1626, 1670, 1683, 2050, 2289
AlwNI CAGNNNCTG 2 cut(s) 1883, 2383
Ama87I CYCGRG 2 cut(s) 663, 1650
Aor13HI TCCGGA 1 cut(s) 269
AoxI GGCC 5 cut(s) 3, 322, 2502, 2626, 2839
ApeKI GCWGC 3 cut(s) 9, 12, 473
ApoI RAATTY 8 cut(s) 723, 1370, 1523, 2227, 2261, 2437, 3013, 3032
ArsI GACNNNNNNTTYG 2 cut(s) 2518, 2550
Asp700I GAANNNNTTC 1 cut(s) 870
AspLEI GCGC 1 cut(s) 2016
AsuHPI GGTGA 7 cut(s) 304, 379, 628, 1555, 2363, 2818, 3155
AvaI CYCGRG 2 cut(s) 663, 1650
BaeGI GKGCMC 1 cut(s) 40
BaeI ACNNNNGTAYC 2 cut(s) 434, 467
BalI TGGCCA 2 cut(s) 5, 324
BamHI GGATCC 1 cut(s) 1675
BanI GGYRCC 2 cut(s) 35, 2415
BanII GRGCYC 4 cut(s) 1134, 1792, 2141, 2553
BarI GAAGNNNNNNTAC 4 cut(s) 62, 94, 2205, 2237
BbsI GAAGAC 1 cut(s) 70
Bbv12I GWGCWC 6 cut(s) 210, 463, 1134, 2141, 2461, 2553
BbvCI CCTCAGC 1 cut(s) 1713
BbvI GCAGC 3 cut(s) 21, 24, 460
BceAI ACGGC 1 cut(s) 1889
BcgI CGANNNNNNTGC 2 cut(s) 465, 499
BciT130I CCWGG 3 cut(s) 1793, 1828, 1849
BciVI GTATCC 2 cut(s) 1078, 1441
BclI TGATCA 4 cut(s) 297, 2266, 2848, 3064
BcoDI GTCTC 4 cut(s) 364, 666, 2182, 2540
BcuI ACTAGT 2 cut(s) 200, 952
BfaI CTAG 9 cut(s) 179, 201, 281, 689, 953, 989, 1314, 2843, 2885
BfmI CTRYAG 3 cut(s) 915, 1239, 2722
BfrI CTTAAG 1 cut(s) 2954
BfuI GTATCC 2 cut(s) 1078, 1441
BglII AGATCT 1 cut(s) 231
BisI GCNGC 7 cut(s) 10, 13, 109, 112, 421, 474, 2330
BlsI GCNGC 7 cut(s) 11, 14, 110, 113, 422, 475, 2331
Bme1390I CCNGG 3 cut(s) 1793, 1828, 1849
BmeT110I CYCGRG 2 cut(s) 663, 1650
BmiI GGNNCC 6 cut(s) 37, 1677, 1789, 1927, 2417, 3128
BmrFI CCNGG 3 cut(s) 1793, 1828, 1849
BmrI ACTGGG 1 cut(s) 3054
BmsI GCATC 4 cut(s) 385, 1900, 2717, 3172
BmuI ACTGGG 1 cut(s) 3054
BoxI GACNNNNGTC 1 cut(s) 1948
BpiI GAAGAC 1 cut(s) 70
BplI GAGNNNNNCTC 2 cut(s) 445, 477
BpmI CTGGAG 2 cut(s) 171, 2306
Bpu10I CCTNAGC 1 cut(s) 1713
BpuEI CTTGAG 4 cut(s) 1174, 2113, 2897, 3005
BsaBI GATNNNNATC 1 cut(s) 354
BsaJI CCNNGG 9 cut(s) 54, 109, 1539, 1791, 1827, 1848, 1905, 2505, 2754
BsaWI WCCGGW 3 cut(s) 269, 1678, 2553
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 2540, 2570
Bsc4I CCNNNNNNNGG 7 cut(s) 574, 1798, 2196, 2624, 2755, 2756, 3136
Bse118I RCCGGY 1 cut(s) 2767
Bse1I ACTGG 3 cut(s) 338, 1456, 3060
Bse3DI GCAATG 1 cut(s) 2859
Bse8I GATNNNNATC 1 cut(s) 354
BseAI TCCGGA 1 cut(s) 269
BseBI CCWGG 3 cut(s) 1793, 1828, 1849
BseDI CCNNGG 9 cut(s) 54, 109, 1539, 1791, 1827, 1848, 1905, 2505, 2754
BseJI GATNNNNATC 1 cut(s) 354
BseLI CCNNNNNNNGG 7 cut(s) 574, 1798, 2196, 2624, 2755, 2756, 3136
BseMI GCAATG 1 cut(s) 2859
BseMII CTCAG 4 cut(s) 1628, 1704, 1721, 1875
BseNI ACTGG 3 cut(s) 338, 1456, 3060
BseRI GAGGAG 2 cut(s) 299, 2600
BseSI GKGCMC 1 cut(s) 40
BseXI GCAGC 3 cut(s) 21, 24, 460
BseYI CCCAGC 1 cut(s) 736
Bsh1236I CGCG 3 cut(s) 111, 159, 1541
BshFI GGCC 5 cut(s) 5, 324, 2504, 2628, 2841
BshNI GGYRCC 2 cut(s) 35, 2415
BsiHKAI GWGCWC 6 cut(s) 210, 463, 1134, 2141, 2461, 2553
BsiHKCI CYCGRG 2 cut(s) 663, 1650
BsiSI CCGG 4 cut(s) 270, 1679, 2554, 2768
BslFI GGGAC 1 cut(s) 839
BslI CCNNNNNNNGG 7 cut(s) 574, 1798, 2196, 2624, 2755, 2756, 3136
BsmAI GTCTC 4 cut(s) 364, 666, 2182, 2540
BsmFI GGGAC 1 cut(s) 839
BsmI GAATGC 1 cut(s) 2855
BsnI GGCC 5 cut(s) 5, 324, 2504, 2628, 2841
BsoBI CYCGRG 2 cut(s) 663, 1650
Bsp1286I GDGCHC 8 cut(s) 40, 210, 463, 1134, 1792, 2141, 2461, 2553
Bsp13I TCCGGA 1 cut(s) 269
Bsp1407I TGTACA 1 cut(s) 1566
Bsp19I CCATGG 1 cut(s) 2754
BspANI GGCC 5 cut(s) 5, 324, 2504, 2628, 2841
BspCNI CTCAG 4 cut(s) 1627, 1705, 1720, 1876
BspEI TCCGGA 1 cut(s) 269
BspFNI CGCG 3 cut(s) 111, 159, 1541
BspHI TCATGA 2 cut(s) 874, 1246
BspLI GGNNCC 6 cut(s) 37, 1677, 1789, 1927, 2417, 3128
BspMAI CTGCAG 1 cut(s) 919
BspPI GGATC 6 cut(s) 350, 1626, 1670, 1683, 2050, 2289
BspT107I GGYRCC 2 cut(s) 35, 2415
BspTI CTTAAG 1 cut(s) 2954
BsrBI CCGCTC 1 cut(s) 420
BsrDI GCAATG 1 cut(s) 2859
BsrFI RCCGGY 1 cut(s) 2767
BsrGI TGTACA 1 cut(s) 1566
BsrI ACTGG 3 cut(s) 338, 1456, 3060
BssAI RCCGGY 1 cut(s) 2767
BssECI CCNNGG 9 cut(s) 54, 109, 1539, 1791, 1827, 1848, 1905, 2505, 2754
BssNAI GTATAC 1 cut(s) 2741
BssT1I CCWWGG 1 cut(s) 2754
Bst1107I GTATAC 1 cut(s) 2741
Bst2UI CCWGG 3 cut(s) 1793, 1828, 1849
Bst6I CTCTTC 6 cut(s) 216, 408, 579, 1283, 2493, 3183
BstAFI CTTAAG 1 cut(s) 2954
BstAPI GCANNNNNTGC 1 cut(s) 2861
BstAUI TGTACA 1 cut(s) 1566
BstC8I GCNNGC 4 cut(s) 7, 491, 1146, 2349
BstDEI CTNAG 5 cut(s) 1614, 1707, 1713, 1884, 2246
BstDSI CCRYGG 4 cut(s) 109, 1539, 1905, 2754
BstFNI CGCG 3 cut(s) 111, 159, 1541
BstHHI GCGC 1 cut(s) 2016
BstMAI GTCTC 4 cut(s) 364, 666, 2182, 2540
BstMWI GCNNNNNNNGC 6 cut(s) 18, 1910, 2020, 2299, 2510, 2861
BstNI CCWGG 3 cut(s) 1793, 1828, 1849
BstNSI RCATGY 5 cut(s) 497, 807, 1148, 2060, 2545
BstPAI GACNNNNGTC 1 cut(s) 1948
BstSCI CCNGG 3 cut(s) 1791, 1826, 1847
BstSFI CTRYAG 3 cut(s) 915, 1239, 2722
BstSLI GKGCMC 1 cut(s) 40
BstUI CGCG 3 cut(s) 111, 159, 1541
BstV1I GCAGC 3 cut(s) 21, 24, 460
BstV2I GAAGAC 1 cut(s) 70
BstX2I RGATCY 4 cut(s) 231, 1675, 2042, 2281
BstXI CCANNNNNNTGG 1 cut(s) 1855
BstYI RGATCY 4 cut(s) 231, 1675, 2042, 2281
BstZ17I GTATAC 1 cut(s) 2741
BsuI GTATCC 2 cut(s) 1078, 1441
BsuRI GGCC 5 cut(s) 5, 324, 2504, 2628, 2841
BtgI CCRYGG 4 cut(s) 109, 1539, 1905, 2754
BtsI GCAGTG 3 cut(s) 1223, 1677, 2018
BtsIMutI CAGTG 6 cut(s) 1223, 1677, 2018, 2381, 2970, 3067
Cac8I GCNNGC 4 cut(s) 7, 491, 1146, 2349
CaiI CAGNNNCTG 2 cut(s) 1883, 2383
CciI TCATGA 2 cut(s) 874, 1246
CfoI GCGC 1 cut(s) 2016
Cfr10I RCCGGY 1 cut(s) 2767
Cfr42I CCGCGG 2 cut(s) 112, 1542
CseI GACGC 1 cut(s) 148
Csp6I GTAC 7 cut(s) 70, 427, 710, 950, 1567, 1873, 3215
CspCI CAANNNNNGTGG 2 cut(s) 1179, 1214
CviQI GTAC 7 cut(s) 70, 427, 710, 950, 1567, 1873, 3215
DdeI CTNAG 5 cut(s) 1614, 1707, 1713, 1884, 2246
DraI TTTAAA 1 cut(s) 2442
EaeI YGGCCR 2 cut(s) 3, 322
Eam1104I CTCTTC 6 cut(s) 216, 408, 579, 1283, 2493, 3183
EarI CTCTTC 6 cut(s) 216, 408, 579, 1283, 2493, 3183
Ecl136II GAGCTC 3 cut(s) 1132, 2139, 2551
Eco130I CCWWGG 1 cut(s) 2754
Eco24I GRGCYC 4 cut(s) 1134, 1792, 2141, 2553
Eco32I GATATC 3 cut(s) 880, 2168, 2323
Eco53kI GAGCTC 3 cut(s) 1132, 2139, 2551
Eco57I CTGAAG 5 cut(s) 345, 489, 1428, 2024, 2360
Eco88I CYCGRG 2 cut(s) 663, 1650
EcoICRI GAGCTC 3 cut(s) 1132, 2139, 2551
EcoRI GAATTC 1 cut(s) 1370
EcoRII CCWGG 3 cut(s) 1791, 1826, 1847
EcoRV GATATC 3 cut(s) 880, 2168, 2323
EcoT14I CCWWGG 1 cut(s) 2754
EcoT22I ATGCAT 1 cut(s) 400
EcoT38I GRGCYC 4 cut(s) 1134, 1792, 2141, 2553
ErhI CCWWGG 1 cut(s) 2754
FaqI GGGAC 1 cut(s) 839
FauI CCCGC 1 cut(s) 416
FauNDI CATATG 1 cut(s) 3173
FbaI TGATCA 4 cut(s) 297, 2266, 2848, 3064
FblI GTMKAC 3 cut(s) 1422, 2573, 2740
Fnu4HI GCNGC 7 cut(s) 10, 13, 109, 112, 421, 474, 2330
FriOI GRGCYC 4 cut(s) 1134, 1792, 2141, 2553
Fsp4HI GCNGC 7 cut(s) 10, 13, 109, 112, 421, 474, 2330
FspBI CTAG 9 cut(s) 179, 201, 281, 689, 953, 989, 1314, 2843, 2885
FspI TGCGCA 1 cut(s) 2015
GlaI GCGC 1 cut(s) 2015
GluI GCNGC 7 cut(s) 10, 13, 109, 112, 421, 474, 2330
GsaI CCCAGC 1 cut(s) 740
GsuI CTGGAG 2 cut(s) 171, 2306
HaeIII GGCC 5 cut(s) 5, 324, 2504, 2628, 2841
HapII CCGG 4 cut(s) 270, 1679, 2554, 2768
HgaI GACGC 1 cut(s) 148
HhaI GCGC 1 cut(s) 2016
Hin6I GCGC 1 cut(s) 2014
HinP1I GCGC 1 cut(s) 2014
HindIII AAGCTT 2 cut(s) 2511, 3050
HpaII CCGG 4 cut(s) 270, 1679, 2554, 2768
HphI GGTGA 7 cut(s) 304, 379, 628, 1555, 2363, 2818, 3155
Hpy166II GTNNAC 7 cut(s) 619, 1423, 1645, 1875, 2574, 2741, 2968
Hpy8I GTNNAC 7 cut(s) 619, 1423, 1645, 1875, 2574, 2741, 2968
Hpy99I CGWCG 2 cut(s) 245, 757
HpyCH4IV ACGT 2 cut(s) 1958, 2484
HpyF10VI GCNNNNNNNGC 6 cut(s) 18, 1910, 2020, 2299, 2510, 2861
HpyF3I CTNAG 5 cut(s) 1614, 1707, 1713, 1884, 2246
HpySE526I ACGT 2 cut(s) 1958, 2484
HspAI GCGC 1 cut(s) 2014
Kpn2I TCCGGA 1 cut(s) 269
Ksp22I TGATCA 4 cut(s) 297, 2266, 2848, 3064
KspI CCGCGG 2 cut(s) 112, 1542
Lsp1109I GCAGC 3 cut(s) 21, 24, 460
LweI GCATC 4 cut(s) 385, 1900, 2717, 3172
MaeI CTAG 9 cut(s) 179, 201, 281, 689, 953, 989, 1314, 2843, 2885
MaeII ACGT 2 cut(s) 1958, 2484
MaeIII GTNAC 6 cut(s) 1010, 1543, 2212, 2271, 2713, 2806
MbiI CCGCTC 1 cut(s) 420
MfeI CAATTG 3 cut(s) 995, 1394, 2333
MflI RGATCY 4 cut(s) 231, 1675, 2042, 2281
MhlI GDGCHC 8 cut(s) 40, 210, 463, 1134, 1792, 2141, 2461, 2553
MlsI TGGCCA 2 cut(s) 5, 324
MluNI TGGCCA 2 cut(s) 5, 324
MlyI GAGTC 6 cut(s) 162, 233, 1640, 2362, 2569, 2963
MmeI TCCRAC 6 cut(s) 120, 631, 700, 1581, 2526, 2696
Mox20I TGGCCA 2 cut(s) 5, 324
Mph1103I ATGCAT 1 cut(s) 400
MroI TCCGGA 1 cut(s) 269
MroXI GAANNNNTTC 1 cut(s) 870
MscI TGGCCA 2 cut(s) 5, 324
MslI CAYNNNNRTG 1 cut(s) 690
Msp20I TGGCCA 2 cut(s) 5, 324
MspA1I CMGCKG 2 cut(s) 111, 1541
MspCI CTTAAG 1 cut(s) 2954
MspI CCGG 4 cut(s) 270, 1679, 2554, 2768
MspR9I CCNGG 3 cut(s) 1793, 1828, 1849
MunI CAATTG 3 cut(s) 995, 1394, 2333
Mva1269I GAATGC 1 cut(s) 2855
MvaI CCWGG 3 cut(s) 1793, 1828, 1849
MvnI CGCG 3 cut(s) 111, 159, 1541
MwoI GCNNNNNNNGC 6 cut(s) 18, 1910, 2020, 2299, 2510, 2861
NcoI CCATGG 1 cut(s) 2754
NdeI CATATG 1 cut(s) 3173
NlaIV GGNNCC 6 cut(s) 37, 1677, 1789, 1927, 2417, 3128
NmeAIII GCCGAG 2 cut(s) 2160, 2530
NmuCI GTSAC 3 cut(s) 1010, 1543, 2806
NsbI TGCGCA 1 cut(s) 2015
NsiI ATGCAT 1 cut(s) 400
NspI RCATGY 5 cut(s) 497, 807, 1148, 2060, 2545
PaeI GCATGC 1 cut(s) 1148
PagI TCATGA 2 cut(s) 874, 1246
PciI ACATGT 2 cut(s) 2056, 2541
PctI GAATGC 1 cut(s) 2855
PdmI GAANNNNTTC 1 cut(s) 870
PfeI GAWTC 9 cut(s) 515, 839, 1529, 1658, 2207, 2339, 3077, 3086, 3114
PflFI GACNNNGTC 1 cut(s) 2383
PkrI GCNGC 7 cut(s) 11, 14, 110, 113, 422, 475, 2331
PleI GAGTC 6 cut(s) 161, 232, 1640, 2362, 2568, 2963
PpsI GAGTC 6 cut(s) 161, 232, 1640, 2362, 2568, 2963
PscI ACATGT 2 cut(s) 2056, 2541
PshAI GACNNNNGTC 1 cut(s) 1948
Psp124BI GAGCTC 3 cut(s) 1134, 2141, 2553
Psp6I CCWGG 3 cut(s) 1791, 1826, 1847
PspFI CCCAGC 1 cut(s) 736
PspGI CCWGG 3 cut(s) 1791, 1826, 1847
PspN4I GGNNCC 6 cut(s) 37, 1677, 1789, 1927, 2417, 3128
PstI CTGCAG 1 cut(s) 919
PstNI CAGNNNCTG 2 cut(s) 1883, 2383
PsuI RGATCY 4 cut(s) 231, 1675, 2042, 2281
PsyI GACNNNGTC 1 cut(s) 2383
RsaI GTAC 7 cut(s) 71, 428, 711, 951, 1568, 1874, 3216
RsaNI GTAC 7 cut(s) 70, 427, 710, 950, 1567, 1873, 3215
RseI CAYNNNNRTG 1 cut(s) 690
SacI GAGCTC 3 cut(s) 1134, 2141, 2553
SacII CCGCGG 2 cut(s) 112, 1542
SatI GCNGC 7 cut(s) 10, 13, 109, 112, 421, 474, 2330
SchI GAGTC 6 cut(s) 162, 233, 1640, 2362, 2569, 2963
ScrFI CCNGG 3 cut(s) 1793, 1828, 1849
SduI GDGCHC 8 cut(s) 40, 210, 463, 1134, 1792, 2141, 2461, 2553
SfaNI GCATC 4 cut(s) 385, 1900, 2717, 3172
SfcI CTRYAG 3 cut(s) 915, 1239, 2722
Sfr303I CCGCGG 2 cut(s) 112, 1542
SgrBI CCGCGG 2 cut(s) 112, 1542
SmiI ATTTAAAT 1 cut(s) 2442
SmiMI CAYNNNNRTG 1 cut(s) 690
SmlI CTYRAG 5 cut(s) 1189, 2092, 2876, 2954, 3020
SmoI CTYRAG 5 cut(s) 1189, 2092, 2876, 2954, 3020
SpeI ACTAGT 2 cut(s) 200, 952
SphI GCATGC 1 cut(s) 1148
SspI AATATT 1 cut(s) 1178
SspMI CTAG 9 cut(s) 179, 201, 281, 689, 953, 989, 1314, 2843, 2885
SstI GAGCTC 3 cut(s) 1134, 2141, 2553
StyD4I CCNGG 3 cut(s) 1791, 1826, 1847
StyI CCWWGG 1 cut(s) 2754
SwaI ATTTAAAT 1 cut(s) 2442
TaiI ACGT 2 cut(s) 1961, 2487
TaqI TCGA 5 cut(s) 227, 842, 2538, 2604, 3112
TatI WGTACW 1 cut(s) 1566
TauI GCSGC 4 cut(s) 111, 114, 423, 2332
TfiI GAWTC 9 cut(s) 515, 839, 1529, 1658, 2207, 2339, 3077, 3086, 3114
TscAI CASTG 6 cut(s) 1230, 1677, 2025, 2388, 2970, 3067
TseFI GTSAC 3 cut(s) 1010, 1543, 2806
TseI GCWGC 3 cut(s) 9, 12, 473
Tsp45I GTSAC 3 cut(s) 1010, 1543, 2806
TspGWI ACGGA 1 cut(s) 460
TspRI CASTG 6 cut(s) 1230, 1677, 2025, 2388, 2970, 3067
Tth111I GACNNNGTC 1 cut(s) 2383
Vha464I CTTAAG 1 cut(s) 2954
XapI RAATTY 8 cut(s) 723, 1370, 1523, 2227, 2261, 2437, 3013, 3032
XbaI TCTAGA 2 cut(s) 280, 688
XceI RCATGY 5 cut(s) 497, 807, 1148, 2060, 2545
XcmI CCANNNNNNNNNTGG 1 cut(s) 3137
XmiI GTMKAC 3 cut(s) 1422, 2573, 2740
XmnI GAANNNNTTC 1 cut(s) 870
XspI CTAG 9 cut(s) 179, 201, 281, 689, 953, 989, 1314, 2843, 2885
Zsp2I ATGCAT 1 cut(s) 400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.