Belongs to the ClpA ClpB family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0330701 |
| rosa_samantha | Rh1AG109000 Rh1AG110300 Rh1AG111200 Rh1BG044400 Rh1CG105900 Rh1DG114700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 56 |
| AfaI | GTAC | 1 cut(s) | 104 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 56 |
| AgsI | TTSAA | 2 cut(s) | 46, 97 |
| AluBI | AGCT | 1 cut(s) | 149 |
| AluI | AGCT | 1 cut(s) | 149 |
| AsuC2I | CCSGG | 1 cut(s) | 6 |
| AsuHPI | GGTGA | 1 cut(s) | 77 |
| BccI | CCATC | 2 cut(s) | 8, 19 |
| BciVI | GTATCC | 1 cut(s) | 124 |
| BcnI | CCSGG | 1 cut(s) | 6 |
| BfmI | CTRYAG | 1 cut(s) | 20 |
| BfuI | GTATCC | 1 cut(s) | 124 |
| Bme1390I | CCNGG | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 6 |
| BmrI | ACTGGG | 1 cut(s) | 175 |
| BmuI | ACTGGG | 1 cut(s) | 175 |
| BpuMI | CCSGG | 1 cut(s) | 6 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 56 |
| Bse1I | ACTGG | 1 cut(s) | 170 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 56 |
| BseMII | CTCAG | 1 cut(s) | 206 |
| BseNI | ACTGG | 1 cut(s) | 170 |
| BseRI | GAGGAG | 1 cut(s) | 24 |
| BsiSI | CCGG | 1 cut(s) | 6 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 56 |
| BspCNI | CTCAG | 1 cut(s) | 205 |
| BspHI | TCATGA | 1 cut(s) | 186 |
| BsrI | ACTGG | 1 cut(s) | 170 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstSCI | CCNGG | 1 cut(s) | 4 |
| BstSFI | CTRYAG | 1 cut(s) | 20 |
| BsuI | GTATCC | 1 cut(s) | 124 |
| BtsIMutI | CAGTG | 1 cut(s) | 163 |
| CciI | TCATGA | 1 cut(s) | 186 |
| Csp6I | GTAC | 1 cut(s) | 103 |
| CviAII | CATG | 1 cut(s) | 187 |
| CviJI | RGCY | 3 cut(s) | 19, 149, 182 |
| CviKI_1 | RGCY | 3 cut(s) | 19, 149, 182 |
| CviQI | GTAC | 1 cut(s) | 103 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| FaeI | CATG | 1 cut(s) | 190 |
| FaiI | YATR | 2 cut(s) | 80, 188 |
| FatI | CATG | 1 cut(s) | 186 |
| HapII | CCGG | 1 cut(s) | 6 |
| Hin1II | CATG | 1 cut(s) | 190 |
| HinfI | GANTC | 2 cut(s) | 29, 190 |
| HpaII | CCGG | 1 cut(s) | 6 |
| HphI | GGTGA | 1 cut(s) | 77 |
| Hpy166II | GTNNAC | 1 cut(s) | 68 |
| Hpy188I | TCNGA | 2 cut(s) | 126, 195 |
| Hpy188III | TCNNGA | 1 cut(s) | 187 |
| Hpy8I | GTNNAC | 1 cut(s) | 68 |
| HpyAV | CCTTC | 1 cut(s) | 172 |
| HpyCH4IV | ACGT | 1 cut(s) | 92 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| HpySE526I | ACGT | 1 cut(s) | 92 |
| Hsp92II | CATG | 1 cut(s) | 190 |
| LmnI | GCTCC | 1 cut(s) | 83 |
| LpnPI | CCDG | 4 cut(s) | 18, 19, 151, 159 |
| MaeII | ACGT | 1 cut(s) | 92 |
| MlyI | GAGTC | 1 cut(s) | 184 |
| MseI | TTAA | 1 cut(s) | 217 |
| MspA1I | CMGCKG | 1 cut(s) | 149 |
| MspI | CCGG | 1 cut(s) | 6 |
| MspR9I | CCNGG | 1 cut(s) | 6 |
| NciI | CCSGG | 1 cut(s) | 6 |
| NlaIII | CATG | 1 cut(s) | 190 |
| PagI | TCATGA | 1 cut(s) | 186 |
| PfeI | GAWTC | 1 cut(s) | 29 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 56 |
| PleI | GAGTC | 1 cut(s) | 184 |
| PpsI | GAGTC | 1 cut(s) | 184 |
| PvuII | CAGCTG | 1 cut(s) | 149 |
| RsaI | GTAC | 1 cut(s) | 104 |
| RsaNI | GTAC | 1 cut(s) | 103 |
| SaqAI | TTAA | 1 cut(s) | 217 |
| SchI | GAGTC | 1 cut(s) | 184 |
| ScrFI | CCNGG | 1 cut(s) | 6 |
| SetI | ASST | 3 cut(s) | 95, 151, 217 |
| SfcI | CTRYAG | 1 cut(s) | 20 |
| SgeI | CNNG | 9 cut(s) | 17, 18, 45, 52, 68, 103, 158, 178, 199 |
| StyD4I | CCNGG | 1 cut(s) | 4 |
| TaiI | ACGT | 1 cut(s) | 95 |
| TaqI | TCGA | 1 cut(s) | 205 |
| TatI | WGTACW | 1 cut(s) | 102 |
| TfiI | GAWTC | 1 cut(s) | 29 |
| Tru1I | TTAA | 1 cut(s) | 217 |
| Tru9I | TTAA | 1 cut(s) | 217 |
| TscAI | CASTG | 1 cut(s) | 170 |
| TspGWI | ACGGA | 1 cut(s) | 143 |
| TspRI | CASTG | 1 cut(s) | 170 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 56 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 57 |