MatK/TrnK amino terminal region
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00040 |
| malus_domestica | MD15G1438900.v1.1 |
| pyrus_communis | pycom16g22980 |
| rosa_chinensis | RchiOBHm_CPg0502521 |
| rosa_samantha | Rh1AG125300 Rh1CG119200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 302, 348, 372, 586 |
| AclWI | GGATC | 2 cut(s) | 247, 382 |
| AcoI | YGGCCR | 1 cut(s) | 134 |
| AcsI | RAATTY | 3 cut(s) | 172, 257, 506 |
| AfaI | GTAC | 3 cut(s) | 153, 460, 465 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 236 |
| AgsI | TTSAA | 4 cut(s) | 126, 381, 478, 568 |
| AjnI | CCWGG | 1 cut(s) | 64 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 541, 573 |
| AluBI | AGCT | 2 cut(s) | 205, 297 |
| AluI | AGCT | 2 cut(s) | 205, 297 |
| Alw26I | GTCTC | 1 cut(s) | 63 |
| AlwI | GGATC | 2 cut(s) | 247, 382 |
| AoxI | GGCC | 1 cut(s) | 134 |
| ApoI | RAATTY | 3 cut(s) | 172, 257, 506 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 355, 556 |
| AspS9I | GGNCC | 1 cut(s) | 488 |
| AvaII | GGWCC | 1 cut(s) | 488 |
| BceAI | ACGGC | 1 cut(s) | 149 |
| BciT130I | CCWGG | 1 cut(s) | 66 |
| BcoDI | GTCTC | 1 cut(s) | 63 |
| BfaI | CTAG | 2 cut(s) | 167, 623 |
| BmcAI | AGTACT | 1 cut(s) | 460 |
| Bme1390I | CCNGG | 1 cut(s) | 66 |
| Bme18I | GGWCC | 1 cut(s) | 488 |
| BmgT120I | GGNCC | 1 cut(s) | 488 |
| BmrFI | CCNGG | 1 cut(s) | 66 |
| BmsI | GCATC | 1 cut(s) | 286 |
| BsaI | GGTCTC | 1 cut(s) | 63 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 236 |
| Bse3DI | GCAATG | 1 cut(s) | 44 |
| BseBI | CCWGG | 1 cut(s) | 66 |
| BseGI | GGATG | 1 cut(s) | 277 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 236 |
| BseMI | GCAATG | 1 cut(s) | 44 |
| BseX3I | CGGCCG | 1 cut(s) | 134 |
| BseYI | CCCAGC | 1 cut(s) | 297 |
| Bsh1285I | CGRYCG | 2 cut(s) | 137, 331 |
| BshFI | GGCC | 1 cut(s) | 136 |
| BsiEI | CGRYCG | 2 cut(s) | 137, 331 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 236 |
| BsmAI | GTCTC | 1 cut(s) | 63 |
| BsmI | GAATGC | 1 cut(s) | 97 |
| BsnI | GGCC | 1 cut(s) | 136 |
| Bso31I | GGTCTC | 1 cut(s) | 63 |
| Bsp143I | GATC | 3 cut(s) | 239, 374, 619 |
| BspACI | CCGC | 4 cut(s) | 302, 348, 372, 586 |
| BspANI | GGCC | 1 cut(s) | 136 |
| BspHI | TCATGA | 1 cut(s) | 631 |
| BspPI | GGATC | 2 cut(s) | 247, 382 |
| BspTNI | GGTCTC | 1 cut(s) | 63 |
| BsrDI | GCAATG | 1 cut(s) | 44 |
| BssMI | GATC | 3 cut(s) | 239, 374, 619 |
| Bst2UI | CCWGG | 1 cut(s) | 66 |
| Bst4CI | ACNGT | 1 cut(s) | 463 |
| Bst6I | CTCTTC | 1 cut(s) | 563 |
| BstF5I | GGATG | 1 cut(s) | 277 |
| BstKTI | GATC | 3 cut(s) | 242, 377, 622 |
| BstMAI | GTCTC | 1 cut(s) | 63 |
| BstMBI | GATC | 3 cut(s) | 239, 374, 619 |
| BstMCI | CGRYCG | 2 cut(s) | 137, 331 |
| BstNI | CCWGG | 1 cut(s) | 66 |
| BstSCI | CCNGG | 1 cut(s) | 64 |
| BstX2I | RGATCY | 1 cut(s) | 374 |
| BstYI | RGATCY | 1 cut(s) | 374 |
| BstZI | CGGCCG | 1 cut(s) | 134 |
| BsuRI | GGCC | 1 cut(s) | 136 |
| BtsCI | GGATG | 1 cut(s) | 277 |
| BtsIMutI | CAGTG | 1 cut(s) | 153 |
| CciI | TCATGA | 1 cut(s) | 631 |
| Cfr13I | GGNCC | 1 cut(s) | 488 |
| Csp6I | GTAC | 3 cut(s) | 152, 459, 464 |
| CviAII | CATG | 1 cut(s) | 632 |
| CviJI | RGCY | 5 cut(s) | 136, 205, 248, 297, 443 |
| CviKI_1 | RGCY | 5 cut(s) | 136, 205, 248, 297, 443 |
| CviQI | GTAC | 3 cut(s) | 152, 459, 464 |
| DpnI | GATC | 3 cut(s) | 241, 376, 621 |
| DpnII | GATC | 3 cut(s) | 239, 374, 619 |
| EaeI | YGGCCR | 1 cut(s) | 134 |
| EagI | CGGCCG | 1 cut(s) | 134 |
| Eam1104I | CTCTTC | 1 cut(s) | 563 |
| EarI | CTCTTC | 1 cut(s) | 563 |
| EciI | GGCGGA | 3 cut(s) | 317, 363, 601 |
| EclXI | CGGCCG | 1 cut(s) | 134 |
| Eco31I | GGTCTC | 1 cut(s) | 63 |
| Eco47I | GGWCC | 1 cut(s) | 488 |
| Eco52I | CGGCCG | 1 cut(s) | 134 |
| EcoO109I | RGGNCCY | 1 cut(s) | 488 |
| EcoRI | GAATTC | 1 cut(s) | 506 |
| EcoRII | CCWGG | 1 cut(s) | 64 |
| FaeI | CATG | 1 cut(s) | 635 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 541, 573 |
| FatI | CATG | 1 cut(s) | 631 |
| FokI | GGATG | 1 cut(s) | 264 |
| FspBI | CTAG | 2 cut(s) | 167, 623 |
| GsaI | CCCAGC | 1 cut(s) | 301 |
| HaeIII | GGCC | 1 cut(s) | 136 |
| Hin1II | CATG | 1 cut(s) | 635 |
| HindIII | AAGCTT | 1 cut(s) | 203 |
| HinfI | GANTC | 4 cut(s) | 72, 157, 305, 314 |
| Hpy166II | GTNNAC | 1 cut(s) | 449 |
| Hpy188I | TCNGA | 2 cut(s) | 313, 319 |
| Hpy188III | TCNNGA | 1 cut(s) | 632 |
| Hpy8I | GTNNAC | 1 cut(s) | 449 |
| Hpy99I | CGWCG | 1 cut(s) | 313 |
| HpyCH4III | ACNGT | 1 cut(s) | 463 |
| Hsp92II | CATG | 1 cut(s) | 635 |
| Kzo9I | GATC | 3 cut(s) | 239, 374, 619 |
| LpnPI | CCDG | 6 cut(s) | 51, 78, 258, 283, 307, 439 |
| LweI | GCATC | 1 cut(s) | 286 |
| MaeI | CTAG | 2 cut(s) | 167, 623 |
| MaeIII | GTNAC | 1 cut(s) | 263 |
| MalI | GATC | 3 cut(s) | 241, 376, 621 |
| MboI | GATC | 3 cut(s) | 239, 374, 619 |
| MboII | GAAGA | 7 cut(s) | 81, 211, 369, 530, 533, 549, 580 |
| MfeI | CAATTG | 1 cut(s) | 161 |
| MflI | RGATCY | 1 cut(s) | 374 |
| MluCI | AATT | 7 cut(s) | 86, 161, 172, 222, 257, 494, 506 |
| MlyI | GAGTC | 1 cut(s) | 166 |
| MmeI | TCCRAC | 1 cut(s) | 291 |
| MnlI | CCTC | 2 cut(s) | 564, 575 |
| MroXI | GAANNNNTTC | 2 cut(s) | 355, 556 |
| MseI | TTAA | 3 cut(s) | 182, 432, 627 |
| MslI | CAYNNNNRTG | 1 cut(s) | 48 |
| MspA1I | CMGCKG | 1 cut(s) | 297 |
| MspR9I | CCNGG | 1 cut(s) | 66 |
| MunI | CAATTG | 1 cut(s) | 161 |
| Mva1269I | GAATGC | 1 cut(s) | 97 |
| MvaI | CCWGG | 1 cut(s) | 66 |
| NdeII | GATC | 3 cut(s) | 239, 374, 619 |
| NlaIII | CATG | 1 cut(s) | 635 |
| PagI | TCATGA | 1 cut(s) | 631 |
| PctI | GAATGC | 1 cut(s) | 97 |
| PdmI | GAANNNNTTC | 2 cut(s) | 355, 556 |
| PfeI | GAWTC | 3 cut(s) | 72, 305, 314 |
| PleI | GAGTC | 1 cut(s) | 165 |
| PpsI | GAGTC | 1 cut(s) | 165 |
| PpuMI | RGGWCCY | 1 cut(s) | 488 |
| Psp5II | RGGWCCY | 1 cut(s) | 488 |
| Psp6I | CCWGG | 1 cut(s) | 64 |
| PspFI | CCCAGC | 1 cut(s) | 297 |
| PspGI | CCWGG | 1 cut(s) | 64 |
| PspPI | GGNCC | 1 cut(s) | 488 |
| PspPPI | RGGWCCY | 1 cut(s) | 488 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 544, 576 |
| PsuI | RGATCY | 1 cut(s) | 374 |
| PvuII | CAGCTG | 1 cut(s) | 297 |
| RsaI | GTAC | 3 cut(s) | 153, 460, 465 |
| RsaNI | GTAC | 3 cut(s) | 152, 459, 464 |
| RseI | CAYNNNNRTG | 1 cut(s) | 48 |
| SaqAI | TTAA | 3 cut(s) | 182, 432, 627 |
| Sau3AI | GATC | 3 cut(s) | 239, 374, 619 |
| Sau96I | GGNCC | 1 cut(s) | 488 |
| ScaI | AGTACT | 1 cut(s) | 460 |
| SchI | GAGTC | 1 cut(s) | 166 |
| ScrFI | CCNGG | 1 cut(s) | 66 |
| SetI | ASST | 5 cut(s) | 207, 299, 357, 490, 575 |
| SfaNI | GCATC | 1 cut(s) | 286 |
| SinI | GGWCC | 1 cut(s) | 488 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 48 |
| Sse9I | AATT | 7 cut(s) | 86, 161, 172, 222, 257, 494, 506 |
| SsiI | CCGC | 4 cut(s) | 302, 348, 372, 586 |
| SspI | AATATT | 2 cut(s) | 17, 142 |
| SspMI | CTAG | 2 cut(s) | 167, 623 |
| StyD4I | CCNGG | 1 cut(s) | 64 |
| TaaI | ACNGT | 1 cut(s) | 463 |
| TaqI | TCGA | 3 cut(s) | 327, 400, 418 |
| TaqII | GACCGA | 1 cut(s) | 345 |
| TasI | AATT | 7 cut(s) | 86, 161, 172, 222, 257, 494, 506 |
| TatI | WGTACW | 1 cut(s) | 458 |
| TfiI | GAWTC | 3 cut(s) | 72, 305, 314 |
| Tru1I | TTAA | 3 cut(s) | 182, 432, 627 |
| Tru9I | TTAA | 3 cut(s) | 182, 432, 627 |
| TscAI | CASTG | 1 cut(s) | 153 |
| TspDTI | ATGAA | 2 cut(s) | 17, 212 |
| TspGWI | ACGGA | 2 cut(s) | 169, 530 |
| TspRI | CASTG | 1 cut(s) | 153 |
| VpaK11BI | GGWCC | 1 cut(s) | 488 |
| XapI | RAATTY | 3 cut(s) | 172, 257, 506 |
| XmnI | GAANNNNTTC | 2 cut(s) | 355, 556 |
| XspI | CTAG | 2 cut(s) | 167, 623 |
| ZrmI | AGTACT | 1 cut(s) | 460 |