Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0017170

Physical Location & Seq

Genomic Coordinates Forward (+)

59386024 .. 59387986

Gene Structure 1963 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG358900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGCCTTCTTCTTCGCCAATCTCTCTCACTGTGGTGTCTGAATCCATGGTGTTTCCAGACCAGACCTCCACCCTCGGAGACCTCAAGCTTTCGGTTTCTGACCTCCCCATGCTCTCATGTCACTACATCCAAAAGGGTGGCCTCTTCACCAAGCCTTCTTTCCCAATCCAATCCCTGGTCTCGCTACTCAAGACTGGCCTCTCCCAGACCCTCACTCGCTTCCCGCCCTTGGCCGGCCGGTTGACTACGGACAAAGATGGTTACTTGTACATCACCTGCAACGACGCCGGTGCTGATTTTATTCACGCAGCGGCGACTGAGGTCTCCGTGCATGACATTCTGTCGCCGACTCACGTGCCGGAGTCGGTGAAGGAGTTTTTTGCATTGGACAGGACTGTGAGCTACACCGGCCATCACAACCCAATCCTGGCAGTCCAGGTCACCGAGCTCCAAGACGGAGTTTTCATCGGTTGCGCCCTCAACCACGCCGTCACTGACGGCACCTCCTTCTGGAACTTCTTCAACACCTTCGCCGAGGTCTGCCGCGGCGGCAAGAGCTTCTCCAGAAAGCCGGACTTCACCCGGGACTCGATTCTGATTTCTCAGGCGGTCCTTCAGTTGCCGGAAGGTGGGCCCAAGGTCACATTCAACGTCAACGAGCCGTTGACCGAGAGAATCTTCAGCTTCAGCAGACAAGCCATTCTGAAACTAAAAGCCACAACTAACAATAGCAACAACAAATGGACCCAAAACGACGACGTCGCCACGGCCGTCGAGATTCTCGGGAAGCAGAGCAACGACCCTTACGAAACTAACAACAACAACAACAACAACGCCAGAGTAACCTCCATCATCGAAAACTGGTTGAAGAATTCCAAGCATCAAATCACTGAGAACAAAACGGCAGCGGAGATCTCGTCGTTTCAGTCGCTCTGCGCGCTTCTGTGGAAGGCTGTGACACGCGCCAGGAAGCTGCCGGAGTCGAAAACGACGACGTTCAGAATGGCAGTGAACTGCCGTCACAGGCTGGAGCCGAAGCTGGACCCGTACTACTTCGGGAACGCAATCCAAAGCATCCCGACGTACGCGTCCTCGGGAGACGTGTTGTCTAGGGATCTGAGATGGTGCGCGGAGCAGCTCAACGACAACGTGAAGGCGCACGATAGTGATAAGGTGAGGGAGTGCATAGAGGATTGGGAGAAGAACCCGCGGGTGTTTCCGCTAGGGAACTTCGACGGTGCATCAATGACGATGGGTAGCTCGCCGAGGTTTCCGATGTACGACAACGATTTCGGGTGGGGCAGGCCGTTGGCGGTTCGGAGCGGGCCGGCGAATAAATTCGACGGTAAGATTTCGGCGTTTCCGGGGAGGGACGGAGCTGGGACCGTTGATCTGGAGGTGGTTTTGGCGCCTGACACGATGGCGGGGTTGGAGTCTGATTTGGAGTTCATGCAATACGTGTCAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010143 GO:0016043 GO:0030154 GO:0032502 GO:0032989 GO:0043170 GO:0044424 GO:0044464 GO:0048468 GO:0048856 GO:0048869 GO:0051179 GO:0071704 GO:0071840 GO:0090558 GO:0090626 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 Transferase

Protein Analysis

489

Amino Acids

54.05

Weight (kDa)

5.85

Isoelectric Point (pI)

42.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	8 - 484	2.2e-112	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017170)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39980
fragaria_vesca	FvH4_7g24060
malus_domestica	MD01G1147800.v1.1 MD07G1214800.v1.1
prunus_persica	Prupe.2G246800_v2.0.a1
pyrus_communis	pycom07g19720
rosa_chinensis	RchiOBHm_Chr1g0369491
rosa_laevigata	RLG00000027124
rosa_multiflora	Rmu_ssc0000484.1_g000024
rosa_roxburghii	Rroxscaffold_4G00287590
rosa_rugosa	Rorug01G0351000
rosa_samantha	Rh1AG358900
rosa_wichuraiana	Rw1G031610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	284
AasI	GACNNNNNNGTC	1 cut(s)	1087
AatII	GACGTC	1 cut(s)	762
Acc36I	ACCTGC	1 cut(s)	284
AccB1I	GGYRCC	2 cut(s)	500, 1408
AccB7I	CCANNNNNTGG	1 cut(s)	175
AccBSI	CCGCTC	1 cut(s)	1323
AccII	CGCG	6 cut(s)	546, 938, 963, 1088, 1130, 1210
AclWI	GGATC	1 cut(s)	1122
AcoI	YGGCCR	4 cut(s)	231, 235, 409, 768
AcsI	RAATTY	2 cut(s)	871, 1337
AcuI	CTGAAG	3 cut(s)	599, 664, 670
AcvI	CACGTG	1 cut(s)	355
AcyI	GRCGYC	3 cut(s)	285, 759, 1409
AfaI	GTAC	4 cut(s)	269, 1049, 1085, 1280
AfiI	CCNNNNNNNGG	6 cut(s)	175, 229, 233, 427, 510, 629
AflIII	ACRYGT	3 cut(s)	1086, 1101, 1458
AgsI	TTSAA	3 cut(s)	523, 649, 868
AhdI	GACNNNNNGTC	2 cut(s)	340, 1105
AjiI	CACGTC	1 cut(s)	1102
AjnI	CCWGG	4 cut(s)	174, 426, 435, 965
AjuI	GAANNNNNNNTTGG	4 cut(s)	143, 175, 629, 661
AleI	CACNNNNGTG	2 cut(s)	32, 1164
Alw21I	GWGCWC	1 cut(s)	450
Alw26I	GTCTC	4 cut(s)	72, 184, 328, 1092
AlwI	GGATC	1 cut(s)	1122
Ama87I	CYCGRG	3 cut(s)	582, 782, 1093
AoxI	GGCC	9 cut(s)	139, 196, 231, 235, 409, 632, 768, 1304, 1325
ApaI	GGGCCC	1 cut(s)	636
ApeKI	GCWGC	4 cut(s)	308, 905, 973, 1135
ApoI	RAATTY	2 cut(s)	871, 1337
ArsI	GACNNNNNNTTYG	2 cut(s)	1274, 1306
Asp700I	GAANNNNTTC	2 cut(s)	518, 1337
AspLEI	GCGC	7 cut(s)	476, 938, 940, 965, 1130, 1159, 1411
AspS9I	GGNCC	7 cut(s)	610, 632, 633, 744, 1042, 1325, 1383
AsuC2I	CCSGG	3 cut(s)	583, 584, 1365
AsuHPI	GGTGA	6 cut(s)	139, 265, 379, 433, 571, 1186
AvaI	CYCGRG	3 cut(s)	582, 782, 1093
AvaII	GGWCC	4 cut(s)	610, 744, 1042, 1383
BaeGI	GKGCMC	1 cut(s)	636
BanI	GGYRCC	2 cut(s)	500, 1408
BanII	GRGCYC	2 cut(s)	450, 636
BbrPI	CACGTG	1 cut(s)	355
Bbv12I	GWGCWC	1 cut(s)	450
BbvI	GCAGC	4 cut(s)	320, 917, 960, 1147
BccI	CCATC	6 cut(s)	251, 420, 857, 1116, 1246, 1414
BceAI	ACGGC	8 cut(s)	473, 514, 646, 755, 783, 918, 1002, 1291
BcgI	CGANNNNNNTGC	4 cut(s)	272, 306, 337, 371
BciT130I	CCWGG	4 cut(s)	176, 428, 437, 967
BcnI	CCSGG	3 cut(s)	583, 584, 1365
BcoDI	GTCTC	4 cut(s)	72, 184, 328, 1092
BfaI	CTAG	2 cut(s)	1110, 1223
BfoI	RGCGCY	1 cut(s)	1412
BfuAI	ACCTGC	1 cut(s)	284
BglI	GCCNNNNNGGC	1 cut(s)	549
BglII	AGATCT	1 cut(s)	912
BisI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 906, 974, 1136
BlsI	GCNGC	8 cut(s)	310, 313, 545, 548, 551, 907, 975, 1137
Bme1390I	CCNGG	7 cut(s)	176, 428, 437, 583, 584, 967, 1365
Bme18I	GGWCC	4 cut(s)	610, 744, 1042, 1383
BmeRI	GACNNNNNGTC	2 cut(s)	340, 1105
BmeT110I	CYCGRG	3 cut(s)	582, 782, 1093
BmgBI	CACGTC	1 cut(s)	1102
BmgT120I	GGNCC	7 cut(s)	610, 632, 633, 744, 1042, 1325, 1383
BmiI	GGNNCC	7 cut(s)	502, 634, 746, 1032, 1044, 1384, 1410
BmrFI	CCNGG	7 cut(s)	176, 428, 437, 583, 584, 967, 1365
BmsI	GCATC	3 cut(s)	889, 1083, 1250
BoxI	GACNNNNGTC	1 cut(s)	320
BpmI	CTGGAG	3 cut(s)	547, 1049, 1415
BpuEI	CTTGAG	2 cut(s)	68, 173
BpuMI	CCSGG	3 cut(s)	583, 584, 1365
BsaAI	YACGTR	2 cut(s)	355, 1459
BsaHI	GRCGYC	3 cut(s)	285, 759, 1409
BsaI	GGTCTC	3 cut(s)	72, 184, 328
BsaXI	ACNNNNNCTCC	6 cut(s)	50, 80, 488, 518, 902, 932
Bsc4I	CCNNNNNNNGG	6 cut(s)	175, 229, 233, 427, 510, 629
Bse118I	RCCGGY	5 cut(s)	233, 237, 287, 407, 1327
Bse1I	ACTGG	2 cut(s)	199, 866
BseBI	CCWGG	4 cut(s)	176, 428, 437, 967
BseGI	GGATG	2 cut(s)	126, 1074
BseLI	CCNNNNNNNGG	6 cut(s)	175, 229, 233, 427, 510, 629
BseMII	CTCAG	4 cut(s)	309, 617, 882, 1109
BseNI	ACTGG	2 cut(s)	199, 866
BsePI	GCGCGC	1 cut(s)	936
BseSI	GKGCMC	1 cut(s)	636
BseX3I	CGGCCG	2 cut(s)	235, 768
BseXI	GCAGC	4 cut(s)	320, 917, 960, 1147
BseYI	CCCAGC	1 cut(s)	1379
Bsh1236I	CGCG	6 cut(s)	546, 938, 963, 1088, 1130, 1210
Bsh1285I	CGRYCG	2 cut(s)	238, 771
BshFI	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1306, 1327
BshNI	GGYRCC	2 cut(s)	500, 1408
BsiEI	CGRYCG	2 cut(s)	238, 771
BsiHKAI	GWGCWC	1 cut(s)	450
BsiHKCI	CYCGRG	3 cut(s)	582, 782, 1093
BsiWI	CGTACG	1 cut(s)	1083
BslFI	GGGAC	3 cut(s)	599, 1385, 1396
BslI	CCNNNNNNNGG	6 cut(s)	175, 229, 233, 427, 510, 629
BsmAI	GTCTC	4 cut(s)	72, 184, 328, 1092
BsmBI	CGTCTC	1 cut(s)	1092
BsmFI	GGGAC	3 cut(s)	599, 1385, 1396
BsnI	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1306, 1327
Bso31I	GGTCTC	3 cut(s)	72, 184, 328
BsoBI	CYCGRG	3 cut(s)	582, 782, 1093
Bsp120I	GGGCCC	1 cut(s)	632
Bsp1286I	GDGCHC	2 cut(s)	450, 636
Bsp1407I	TGTACA	1 cut(s)	267
Bsp143I	GATC	3 cut(s)	912, 1114, 1390
Bsp19I	CCATGG	1 cut(s)	45
BspANI	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1306, 1327
BspCNI	CTCAG	4 cut(s)	310, 616, 883, 1110
BspFNI	CGCG	6 cut(s)	546, 938, 963, 1088, 1130, 1210
BspLI	GGNNCC	7 cut(s)	502, 634, 746, 1032, 1044, 1384, 1410
BspMI	ACCTGC	1 cut(s)	284
BspPI	GGATC	1 cut(s)	1122
BspT107I	GGYRCC	2 cut(s)	500, 1408
BspTNI	GGTCTC	3 cut(s)	72, 184, 328
BsrBI	CCGCTC	1 cut(s)	1323
BsrFI	RCCGGY	5 cut(s)	233, 237, 287, 407, 1327
BsrGI	TGTACA	1 cut(s)	267
BsrI	ACTGG	2 cut(s)	199, 866
BssAI	RCCGGY	5 cut(s)	233, 237, 287, 407, 1327
BssHII	GCGCGC	1 cut(s)	936
BssMI	GATC	3 cut(s)	912, 1114, 1390
BssNI	GRCGYC	3 cut(s)	285, 759, 1409
BssT1I	CCWWGG	3 cut(s)	45, 228, 636
Bst2UI	CCWGG	4 cut(s)	176, 428, 437, 967
Bst4CI	ACNGT	5 cut(s)	31, 397, 1238, 1346, 1387
Bst6I	CTCTTC	1 cut(s)	149
BstACI	GRCGYC	3 cut(s)	285, 759, 1409
BstAUI	TGTACA	1 cut(s)	267
BstBAI	YACGTR	2 cut(s)	355, 1459
BstC8I	GCNNGC	6 cut(s)	235, 938, 1262, 1304, 1325, 1329
BstDEI	CTNAG	4 cut(s)	318, 603, 891, 1118
BstDSI	CCRYGG	4 cut(s)	45, 544, 765, 1208
BstEII	GGTNACC	1 cut(s)	439
BstF5I	GGATG	2 cut(s)	126, 1074
BstFNI	CGCG	6 cut(s)	546, 938, 963, 1088, 1130, 1210
BstH2I	RGCGCY	1 cut(s)	1412
BstHHI	GCGC	7 cut(s)	476, 938, 940, 965, 1130, 1159, 1411
BstKTI	GATC	3 cut(s)	915, 1117, 1393
BstMAI	GTCTC	4 cut(s)	72, 184, 328, 1092
BstMBI	GATC	3 cut(s)	912, 1114, 1390
BstMCI	CGRYCG	2 cut(s)	238, 771
BstMWI	GCNNNNNNNGC	4 cut(s)	408, 549, 555, 937
BstNI	CCWGG	4 cut(s)	176, 428, 437, 967
BstPAI	GACNNNNGTC	1 cut(s)	320
BstPI	GGTNACC	1 cut(s)	439
BstSCI	CCNGG	7 cut(s)	174, 426, 435, 581, 582, 965, 1363
BstSLI	GKGCMC	1 cut(s)	636
BstUI	CGCG	6 cut(s)	546, 938, 963, 1088, 1130, 1210
BstV1I	GCAGC	4 cut(s)	320, 917, 960, 1147
BstX2I	RGATCY	2 cut(s)	912, 1114
BstXI	CCANNNNNNTGG	1 cut(s)	137
BstYI	RGATCY	2 cut(s)	912, 1114
BstZI	CGGCCG	2 cut(s)	235, 768
BsuRI	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1306, 1327
BtgI	CCRYGG	4 cut(s)	45, 544, 765, 1208
BtrI	CACGTC	1 cut(s)	1102
BtsCI	GGATG	2 cut(s)	126, 1074
BtsI	GCAGTG	1 cut(s)	1014
BtsIMutI	CAGTG	4 cut(s)	27, 492, 888, 1014
BveI	ACCTGC	1 cut(s)	284
Cac8I	GCNNGC	6 cut(s)	235, 938, 1262, 1304, 1325, 1329
CfoI	GCGC	7 cut(s)	476, 938, 940, 965, 1130, 1159, 1411
Cfr10I	RCCGGY	5 cut(s)	233, 237, 287, 407, 1327
Cfr13I	GGNCC	7 cut(s)	610, 632, 633, 744, 1042, 1325, 1383
Cfr42I	CCGCGG	2 cut(s)	547, 1211
Cfr9I	CCCGGG	1 cut(s)	582
CseI	GACGC	2 cut(s)	293, 1077
Csp6I	GTAC	4 cut(s)	268, 1048, 1084, 1279
CviAII	CATG	5 cut(s)	46, 109, 117, 332, 1450
CviQI	GTAC	4 cut(s)	268, 1048, 1084, 1279
DdeI	CTNAG	4 cut(s)	318, 603, 891, 1118
DinI	GGCGCC	1 cut(s)	1410
DpnI	GATC	3 cut(s)	914, 1116, 1392
DpnII	GATC	3 cut(s)	912, 1114, 1390
DrdI	GACNNNNNNGTC	1 cut(s)	1087
DriI	GACNNNNNGTC	2 cut(s)	340, 1105
DseDI	GACNNNNNNGTC	1 cut(s)	1087
EaeI	YGGCCR	4 cut(s)	231, 235, 409, 768
EagI	CGGCCG	2 cut(s)	235, 768
Eam1104I	CTCTTC	1 cut(s)	149
Eam1105I	GACNNNNNGTC	2 cut(s)	340, 1105
EarI	CTCTTC	1 cut(s)	149
Ecl136II	GAGCTC	1 cut(s)	448
EclXI	CGGCCG	2 cut(s)	235, 768
Eco130I	CCWWGG	3 cut(s)	45, 228, 636
Eco24I	GRGCYC	2 cut(s)	450, 636
Eco31I	GGTCTC	3 cut(s)	72, 184, 328
Eco47I	GGWCC	4 cut(s)	610, 744, 1042, 1383
Eco52I	CGGCCG	2 cut(s)	235, 768
Eco53kI	GAGCTC	1 cut(s)	448
Eco57I	CTGAAG	3 cut(s)	599, 664, 670
Eco72I	CACGTG	1 cut(s)	355
Eco88I	CYCGRG	3 cut(s)	582, 782, 1093
Eco91I	GGTNACC	1 cut(s)	439
EcoICRI	GAGCTC	1 cut(s)	448
EcoO65I	GGTNACC	1 cut(s)	439
EcoRI	GAATTC	1 cut(s)	871
EcoRII	CCWGG	4 cut(s)	174, 426, 435, 965
EcoT14I	CCWWGG	3 cut(s)	45, 228, 636
EcoT38I	GRGCYC	2 cut(s)	450, 636
EgeI	GGCGCC	1 cut(s)	1410
EheI	GGCGCC	1 cut(s)	1410
ErhI	CCWWGG	3 cut(s)	45, 228, 636
Esp3I	CGTCTC	1 cut(s)	1092
FaeI	CATG	5 cut(s)	49, 112, 120, 335, 1453
FaiI	YATR	6 cut(s)	47, 110, 118, 333, 1187, 1451
FalI	AAGNNNNNCTT	2 cut(s)	560, 592
FaqI	GGGAC	3 cut(s)	599, 1385, 1396
FatI	CATG	5 cut(s)	45, 108, 116, 331, 1449
FauI	CCCGC	5 cut(s)	231, 1203, 1215, 1316, 1417
Fnu4HI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 906, 974, 1136
FokI	GGATG	2 cut(s)	113, 1061
FriOI	GRGCYC	2 cut(s)	450, 636
FseI	GGCCGGCC	1 cut(s)	237
Fsp4HI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 906, 974, 1136
FspBI	CTAG	2 cut(s)	1110, 1223
GlaI	GCGC	7 cut(s)	475, 937, 939, 964, 1129, 1158, 1410
GluI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 906, 974, 1136
GsaI	CCCAGC	1 cut(s)	1383
GsuI	CTGGAG	3 cut(s)	547, 1049, 1415
HaeII	RGCGCY	1 cut(s)	1412
HaeIII	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1306, 1327
HgaI	GACGC	2 cut(s)	293, 1077
HhaI	GCGC	7 cut(s)	476, 938, 940, 965, 1130, 1159, 1411
Hin1I	GRCGYC	3 cut(s)	285, 759, 1409
Hin1II	CATG	5 cut(s)	49, 112, 120, 335, 1453
Hin6I	GCGC	7 cut(s)	474, 936, 938, 963, 1128, 1157, 1409
HinP1I	GCGC	7 cut(s)	474, 936, 938, 963, 1128, 1157, 1409
HincII	GTYRAC	3 cut(s)	243, 655, 666
HindII	GTYRAC	3 cut(s)	243, 655, 666
HindIII	AAGCTT	1 cut(s)	86
HinfI	GANTC	9 cut(s)	41, 349, 362, 587, 592, 675, 778, 980, 1433
HphI	GGTGA	6 cut(s)	139, 265, 379, 433, 571, 1186
Hpy166II	GTNNAC	4 cut(s)	243, 655, 666, 1012
Hpy8I	GTNNAC	4 cut(s)	243, 655, 666, 1012
HpyAV	CCTTC	9 cut(s)	15, 165, 364, 517, 538, 620, 623, 943, 1147
HpyCH4III	ACNGT	5 cut(s)	31, 397, 1238, 1346, 1387
HpyCH4IV	ACGT	8 cut(s)	354, 651, 759, 995, 1082, 1101, 1149, 1458
HpyCH4V	TGCA	6 cut(s)	279, 331, 383, 1185, 1241, 1453
HpyF10VI	GCNNNNNNNGC	4 cut(s)	408, 549, 555, 937
HpyF3I	CTNAG	4 cut(s)	318, 603, 891, 1118
HpySE526I	ACGT	8 cut(s)	354, 651, 759, 995, 1082, 1101, 1149, 1458
Hsp92I	GRCGYC	3 cut(s)	285, 759, 1409
Hsp92II	CATG	5 cut(s)	49, 112, 120, 335, 1453
HspAI	GCGC	7 cut(s)	474, 936, 938, 963, 1128, 1157, 1409
KasI	GGCGCC	1 cut(s)	1408
KroI	GCCGGC	2 cut(s)	233, 1327
KroNI	GCCGGC	2 cut(s)	235, 1329
KspI	CCGCGG	2 cut(s)	547, 1211
Kzo9I	GATC	3 cut(s)	912, 1114, 1390
LmnI	GCTCC	5 cut(s)	453, 1030, 1132, 1320, 1376
Lsp1109I	GCAGC	4 cut(s)	320, 917, 960, 1147
LweI	GCATC	3 cut(s)	889, 1083, 1250
MaeI	CTAG	2 cut(s)	1110, 1223
MaeII	ACGT	8 cut(s)	354, 651, 759, 995, 1082, 1101, 1149, 1458
MaeIII	GTNAC	8 cut(s)	119, 260, 439, 490, 640, 841, 955, 1019
MalI	GATC	3 cut(s)	914, 1116, 1392
MbiI	CCGCTC	1 cut(s)	1323
MboI	GATC	3 cut(s)	912, 1114, 1390
MboII	GAAGA	6 cut(s)	3, 136, 511, 670, 880, 1213
MflI	RGATCY	2 cut(s)	912, 1114
MhlI	GDGCHC	2 cut(s)	450, 636
MluCI	AATT	2 cut(s)	871, 1337
MluI	ACGCGT	1 cut(s)	1086
Mly113I	GGCGCC	1 cut(s)	1409
MlyI	GAGTC	5 cut(s)	343, 371, 581, 989, 1442
MmeI	TCCRAC	1 cut(s)	1410
MroNI	GCCGGC	2 cut(s)	233, 1327
MroXI	GAANNNNTTC	2 cut(s)	518, 1337
MslI	CAYNNNNRTG	2 cut(s)	32, 1164
MspA1I	CMGCKG	4 cut(s)	311, 546, 908, 1210
MspR9I	CCNGG	7 cut(s)	176, 428, 437, 583, 584, 967, 1365
MvaI	CCWGG	4 cut(s)	176, 428, 437, 967
MvnI	CGCG	6 cut(s)	546, 938, 963, 1088, 1130, 1210
MwoI	GCNNNNNNNGC	4 cut(s)	408, 549, 555, 937
NaeI	GCCGGC	2 cut(s)	235, 1329
NarI	GGCGCC	1 cut(s)	1409
NciI	CCSGG	3 cut(s)	583, 584, 1365
NcoI	CCATGG	1 cut(s)	45
NdeII	GATC	3 cut(s)	912, 1114, 1390
NgoMIV	GCCGGC	2 cut(s)	233, 1327
NlaIII	CATG	5 cut(s)	49, 112, 120, 335, 1453
NlaIV	GGNNCC	7 cut(s)	502, 634, 746, 1032, 1044, 1384, 1410
NmeAIII	GCCGAG	2 cut(s)	559, 1290
NmuCI	GTSAC	6 cut(s)	119, 439, 490, 640, 955, 1019
OliI	CACNNNNGTG	2 cut(s)	32, 1164
PaqCI	CACCTGC	1 cut(s)	284
PauI	GCGCGC	1 cut(s)	936
PcsI	WCGNNNNNNNCGW	3 cut(s)	768, 804, 989
PdiI	GCCGGC	2 cut(s)	235, 1329
PdmI	GAANNNNTTC	2 cut(s)	518, 1337
PfeI	GAWTC	4 cut(s)	41, 592, 675, 778
Pfl23II	CGTACG	1 cut(s)	1083
PflFI	GACNNNGTC	1 cut(s)	758
PflMI	CCANNNNNTGG	1 cut(s)	175
PkrI	GCNGC	8 cut(s)	310, 313, 545, 548, 551, 907, 975, 1137
PleI	GAGTC	5 cut(s)	343, 370, 581, 988, 1441
PluTI	GGCGCC	1 cut(s)	1412
PmaCI	CACGTG	1 cut(s)	355
PmlI	CACGTG	1 cut(s)	355
PpsI	GAGTC	5 cut(s)	343, 370, 581, 988, 1441
Ppu21I	YACGTR	2 cut(s)	355, 1459
PshAI	GACNNNNGTC	1 cut(s)	320
Psp124BI	GAGCTC	1 cut(s)	450
Psp6I	CCWGG	4 cut(s)	174, 426, 435, 965
PspCI	CACGTG	1 cut(s)	355
PspEI	GGTNACC	1 cut(s)	439
PspFI	CCCAGC	1 cut(s)	1379
PspGI	CCWGG	4 cut(s)	174, 426, 435, 965
PspLI	CGTACG	1 cut(s)	1083
PspN4I	GGNNCC	7 cut(s)	502, 634, 746, 1032, 1044, 1384, 1410
PspOMI	GGGCCC	1 cut(s)	632
PspPI	GGNCC	7 cut(s)	610, 632, 633, 744, 1042, 1325, 1383
PsuI	RGATCY	2 cut(s)	912, 1114
PsyI	GACNNNGTC	1 cut(s)	758
PteI	GCGCGC	1 cut(s)	936
RigI	GGCCGGCC	1 cut(s)	237
RsaI	GTAC	4 cut(s)	269, 1049, 1085, 1280
RsaNI	GTAC	4 cut(s)	268, 1048, 1084, 1279
RseI	CAYNNNNRTG	2 cut(s)	32, 1164
SacI	GAGCTC	1 cut(s)	450
SacII	CCGCGG	2 cut(s)	547, 1211
SatI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 906, 974, 1136
Sau3AI	GATC	3 cut(s)	912, 1114, 1390
Sau96I	GGNCC	7 cut(s)	610, 632, 633, 744, 1042, 1325, 1383
SchI	GAGTC	5 cut(s)	343, 371, 581, 989, 1442
ScrFI	CCNGG	7 cut(s)	176, 428, 437, 583, 584, 967, 1365
SduI	GDGCHC	2 cut(s)	450, 636
SfaNI	GCATC	3 cut(s)	889, 1083, 1250
SfoI	GGCGCC	1 cut(s)	1410
Sfr303I	CCGCGG	2 cut(s)	547, 1211
SgrAI	CRCCGGYG	1 cut(s)	287
SgrBI	CCGCGG	2 cut(s)	547, 1211
SinI	GGWCC	4 cut(s)	610, 744, 1042, 1383
SmaI	CCCGGG	1 cut(s)	584
SmiMI	CAYNNNNRTG	2 cut(s)	32, 1164
SmlI	CTYRAG	2 cut(s)	83, 188
SmoI	CTYRAG	2 cut(s)	83, 188
Sse9I	AATT	2 cut(s)	871, 1337
SspDI	GGCGCC	1 cut(s)	1408
SspMI	CTAG	2 cut(s)	1110, 1223
SstI	GAGCTC	1 cut(s)	450
StyD4I	CCNGG	7 cut(s)	174, 426, 435, 581, 582, 965, 1363
StyI	CCWWGG	3 cut(s)	45, 228, 636
TaaI	ACNGT	5 cut(s)	31, 397, 1238, 1346, 1387
TaiI	ACGT	8 cut(s)	357, 654, 762, 998, 1085, 1104, 1152, 1461
TaqI	TCGA	6 cut(s)	590, 774, 855, 983, 1233, 1341
TaqII	GACCGA	1 cut(s)	683
TasI	AATT	2 cut(s)	871, 1337
TatI	WGTACW	1 cut(s)	267
TauI	GCSGC	4 cut(s)	314, 546, 549, 552
TfiI	GAWTC	4 cut(s)	41, 592, 675, 778
TscAI	CASTG	4 cut(s)	34, 499, 895, 1014
TseFI	GTSAC	6 cut(s)	119, 439, 490, 640, 955, 1019
TseI	GCWGC	4 cut(s)	308, 905, 973, 1135
Tsp45I	GTSAC	6 cut(s)	119, 439, 490, 640, 955, 1019
TspDTI	ATGAA	2 cut(s)	454, 1438
TspGWI	ACGGA	4 cut(s)	263, 316, 471, 1389
TspMI	CCCGGG	1 cut(s)	582
TspRI	CASTG	4 cut(s)	34, 499, 895, 1014
Tth111I	GACNNNGTC	1 cut(s)	758
Van91I	CCANNNNNTGG	1 cut(s)	175
VpaK11BI	GGWCC	4 cut(s)	610, 744, 1042, 1383
XapI	RAATTY	2 cut(s)	871, 1337
XmaI	CCCGGG	1 cut(s)	582
XmnI	GAANNNNTTC	2 cut(s)	518, 1337
XspI	CTAG	2 cut(s)	1110, 1223
ZraI	GACGTC	1 cut(s)	760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.