Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0017170

Physical Location & Seq

Genomic Coordinates Forward (+)

59782115 .. 59783581

Gene Structure 1467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G031610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGCCTTCTTCTTCGCCAATCTCTCTCACTGTGGTGTCTGAATCCATGGTGTTTCCAGACCAGACCTCCACCCTCGGAGACCTCAAGCTTTCGGTTTCTGACCTCCCCATGCTCTCATGTCACTACATCCAAAAGGGTGGCCTCTTCACCAAGCCTTCTTTCCCAATCCAATCCCTGGTCTCGCTACTCAAGACTGGCCTCTCCCAGACCCTCACTCGCTTCCCGCCCTTGGCCGGCCGGTTGACTACGGACAAAGATGGTTACTTGTACATCACCTGCAACGACGCCGGTGCTGATTTTATTCACGCAGCGGCGACTGAGGTCTCCGTGCATGACATTCTGTCGCCGACTCACGTGCCGGAGTCGGTGAAGGAGTTTTTTGCATTGGACAGGACTGTGAGCTACACCGGCCATCACAACCCAATCCTGGCAGTCCAGGTCACCGAGCTCCAAGACGGAGTTTTCATCGGTTGCGCCCTCAACCACGCCGTCACTGACGGCACCTCCTTCTGGAACTTCTTCAACACCTTCGCCGAGGTCTGCCGCGGCGGCAAGAGCTTCTCCAGAAAGCCGGACTTCACCCGGGACTCGATTCTGATTTCTCAGGCGGTCCTTCAGTTGCCGGAAGGTGGGCCCAAGGTCACATTCAACGTCAACGAGCCGTTGACCGAGAGAATCTTCAGCTTCAGCAGACAAGCCATTCTGAAACTAAAAGCCACAACTAACAATAGCAACAACAAATGGACCCAAAACGACGACGTCGCCACGGCCGTCGAGATTCTCGGGAAGCAGAGCAACGATTCTTACGAAACTAACAACAACAACAACAACGCCAGAGTAACCGCCATCATCGAAAACTGGTTCAAGAATTCCAAGCCGCAAATCACTGAGAACAAAACGGCAGCGGAGATCTCGTCGTTTCAGTCGCTCTGCGCGCTTCTGTGGAAGGCTGTGACACGCGCCAGGAAGCTACCGGAGTCGAAAACGACGACGTTCAGAATGGCAGTGAACTGCCGTCACAGGCTGGAGCCGAAGCTGGACCCGTACTACTTCGGGAACGCAATCCAAAGCATCCCGACGTACGCGTCCTCGGGAGACGTGTTGTCTAGGGATCTGAGATGGTGCGCGGAGCAGCTCAACGACAACGTGAAGGCGCACGATAGTGATAAGGTGAGGGAGTGCATAGAGGATTGGGAGAAGAACCCGCGGGTGTTTCCGCTAGGGAACTTCGACGGTGCATCAATGACGATGGGTAGCTCGCCGAGGTTTCCGATGTACGACAGCGATTTCGGGTGGGGCAGGCCGTTGGCGGTTCGGAGCGGGCCGGCGAATAAATTCGACGGTAAGATTTCGGCGTTTCCGGGGAGGGACGGAGCTGGGACCGTTGATCTGGAGGTGGTTTTGGCGCCTGACACGATGGCGGGGTTGGAGTCTGATTTGGAGTTCATGCAATACGTGTCAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010143 GO:0016043 GO:0030154 GO:0032502 GO:0032989 GO:0043170 GO:0044424 GO:0044464 GO:0048468 GO:0048856 GO:0048869 GO:0051179 GO:0071704 GO:0071840 GO:0090558 GO:0090626 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 Transferase

Protein Analysis

488

Amino Acids

53.87

Weight (kDa)

5.79

Isoelectric Point (pI)

43.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	8 - 483	1.4e-112	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017170)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39980
fragaria_vesca	FvH4_7g24060
malus_domestica	MD01G1147800.v1.1 MD07G1214800.v1.1
prunus_persica	Prupe.2G246800_v2.0.a1
pyrus_communis	pycom07g19720
rosa_chinensis	RchiOBHm_Chr1g0369491
rosa_laevigata	RLG00000027124
rosa_multiflora	Rmu_ssc0000484.1_g000024
rosa_roxburghii	Rroxscaffold_4G00287590
rosa_rugosa	Rorug01G0351000
rosa_samantha	Rh1AG358900
rosa_wichuraiana	Rw1G031610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	284
AasI	GACNNNNNNGTC	1 cut(s)	1084
AatII	GACGTC	1 cut(s)	762
Acc36I	ACCTGC	1 cut(s)	284
AccB1I	GGYRCC	2 cut(s)	500, 1405
AccB7I	CCANNNNNTGG	1 cut(s)	175
AccBSI	CCGCTC	1 cut(s)	1320
AccII	CGCG	6 cut(s)	546, 935, 960, 1085, 1127, 1207
AclWI	GGATC	1 cut(s)	1119
AcoI	YGGCCR	4 cut(s)	231, 235, 409, 768
AcsI	RAATTY	2 cut(s)	868, 1334
AcuI	CTGAAG	3 cut(s)	599, 664, 670
AcvI	CACGTG	1 cut(s)	355
AcyI	GRCGYC	3 cut(s)	285, 759, 1406
AfaI	GTAC	4 cut(s)	269, 1046, 1082, 1277
AfiI	CCNNNNNNNGG	6 cut(s)	175, 229, 233, 427, 510, 629
AflIII	ACRYGT	3 cut(s)	1083, 1098, 1455
AgsI	TTSAA	3 cut(s)	523, 649, 865
AhdI	GACNNNNNGTC	2 cut(s)	340, 1102
AjiI	CACGTC	1 cut(s)	1099
AjnI	CCWGG	4 cut(s)	174, 426, 435, 962
AjuI	GAANNNNNNNTTGG	4 cut(s)	143, 175, 629, 661
AleI	CACNNNNGTG	2 cut(s)	32, 1161
Alw21I	GWGCWC	1 cut(s)	450
Alw26I	GTCTC	4 cut(s)	72, 184, 328, 1089
AlwI	GGATC	1 cut(s)	1119
Ama87I	CYCGRG	3 cut(s)	582, 782, 1090
AoxI	GGCC	9 cut(s)	139, 196, 231, 235, 409, 632, 768, 1301, 1322
ApaI	GGGCCC	1 cut(s)	636
ApeKI	GCWGC	3 cut(s)	308, 902, 1132
ApoI	RAATTY	2 cut(s)	868, 1334
ArsI	GACNNNNNNTTYG	2 cut(s)	1271, 1303
Asp700I	GAANNNNTTC	2 cut(s)	518, 1334
AspLEI	GCGC	7 cut(s)	476, 935, 937, 962, 1127, 1156, 1408
AspS9I	GGNCC	7 cut(s)	610, 632, 633, 744, 1039, 1322, 1380
AsuC2I	CCSGG	3 cut(s)	583, 584, 1362
AsuHPI	GGTGA	6 cut(s)	139, 265, 379, 433, 571, 1183
AvaI	CYCGRG	3 cut(s)	582, 782, 1090
AvaII	GGWCC	4 cut(s)	610, 744, 1039, 1380
BaeGI	GKGCMC	1 cut(s)	636
BanI	GGYRCC	2 cut(s)	500, 1405
BanII	GRGCYC	2 cut(s)	450, 636
BbrPI	CACGTG	1 cut(s)	355
Bbv12I	GWGCWC	1 cut(s)	450
BbvI	GCAGC	3 cut(s)	320, 914, 1144
BccI	CCATC	6 cut(s)	251, 420, 854, 1113, 1243, 1411
BceAI	ACGGC	8 cut(s)	473, 514, 646, 755, 783, 915, 999, 1288
BcgI	CGANNNNNNTGC	4 cut(s)	272, 306, 337, 371
BciT130I	CCWGG	4 cut(s)	176, 428, 437, 964
BcnI	CCSGG	3 cut(s)	583, 584, 1362
BcoDI	GTCTC	4 cut(s)	72, 184, 328, 1089
BfaI	CTAG	2 cut(s)	1107, 1220
BfoI	RGCGCY	1 cut(s)	1409
BfuAI	ACCTGC	1 cut(s)	284
BglI	GCCNNNNNGGC	1 cut(s)	549
BglII	AGATCT	1 cut(s)	909
BisI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 878, 903, 1133
BlsI	GCNGC	8 cut(s)	310, 313, 545, 548, 551, 879, 904, 1134
Bme1390I	CCNGG	7 cut(s)	176, 428, 437, 583, 584, 964, 1362
Bme18I	GGWCC	4 cut(s)	610, 744, 1039, 1380
BmeRI	GACNNNNNGTC	2 cut(s)	340, 1102
BmeT110I	CYCGRG	3 cut(s)	582, 782, 1090
BmgBI	CACGTC	1 cut(s)	1099
BmgT120I	GGNCC	7 cut(s)	610, 632, 633, 744, 1039, 1322, 1380
BmiI	GGNNCC	7 cut(s)	502, 634, 746, 1029, 1041, 1381, 1407
BmrFI	CCNGG	7 cut(s)	176, 428, 437, 583, 584, 964, 1362
BmsI	GCATC	2 cut(s)	1080, 1247
BoxI	GACNNNNGTC	1 cut(s)	320
BpmI	CTGGAG	3 cut(s)	547, 1046, 1412
BpuEI	CTTGAG	2 cut(s)	68, 173
BpuMI	CCSGG	3 cut(s)	583, 584, 1362
BsaAI	YACGTR	2 cut(s)	355, 1456
BsaHI	GRCGYC	3 cut(s)	285, 759, 1406
BsaI	GGTCTC	3 cut(s)	72, 184, 328
BsaWI	WCCGGW	1 cut(s)	973
BsaXI	ACNNNNNCTCC	6 cut(s)	50, 80, 488, 518, 899, 929
Bsc4I	CCNNNNNNNGG	6 cut(s)	175, 229, 233, 427, 510, 629
Bse118I	RCCGGY	5 cut(s)	233, 237, 287, 407, 1324
Bse1I	ACTGG	2 cut(s)	199, 863
BseBI	CCWGG	4 cut(s)	176, 428, 437, 964
BseGI	GGATG	2 cut(s)	126, 1071
BseLI	CCNNNNNNNGG	6 cut(s)	175, 229, 233, 427, 510, 629
BseMII	CTCAG	4 cut(s)	309, 617, 879, 1106
BseNI	ACTGG	2 cut(s)	199, 863
BsePI	GCGCGC	1 cut(s)	933
BseSI	GKGCMC	1 cut(s)	636
BseX3I	CGGCCG	2 cut(s)	235, 768
BseXI	GCAGC	3 cut(s)	320, 914, 1144
BseYI	CCCAGC	1 cut(s)	1376
Bsh1236I	CGCG	6 cut(s)	546, 935, 960, 1085, 1127, 1207
Bsh1285I	CGRYCG	2 cut(s)	238, 771
BshFI	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1303, 1324
BshNI	GGYRCC	2 cut(s)	500, 1405
BsiEI	CGRYCG	2 cut(s)	238, 771
BsiHKAI	GWGCWC	1 cut(s)	450
BsiHKCI	CYCGRG	3 cut(s)	582, 782, 1090
BsiWI	CGTACG	1 cut(s)	1080
BslFI	GGGAC	3 cut(s)	599, 1382, 1393
BslI	CCNNNNNNNGG	6 cut(s)	175, 229, 233, 427, 510, 629
BsmAI	GTCTC	4 cut(s)	72, 184, 328, 1089
BsmBI	CGTCTC	1 cut(s)	1089
BsmFI	GGGAC	3 cut(s)	599, 1382, 1393
BsnI	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1303, 1324
Bso31I	GGTCTC	3 cut(s)	72, 184, 328
BsoBI	CYCGRG	3 cut(s)	582, 782, 1090
Bsp120I	GGGCCC	1 cut(s)	632
Bsp1286I	GDGCHC	2 cut(s)	450, 636
Bsp1407I	TGTACA	1 cut(s)	267
Bsp143I	GATC	3 cut(s)	909, 1111, 1387
Bsp19I	CCATGG	1 cut(s)	45
BspANI	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1303, 1324
BspCNI	CTCAG	4 cut(s)	310, 616, 880, 1107
BspFNI	CGCG	6 cut(s)	546, 935, 960, 1085, 1127, 1207
BspLI	GGNNCC	7 cut(s)	502, 634, 746, 1029, 1041, 1381, 1407
BspMI	ACCTGC	1 cut(s)	284
BspPI	GGATC	1 cut(s)	1119
BspT107I	GGYRCC	2 cut(s)	500, 1405
BspTNI	GGTCTC	3 cut(s)	72, 184, 328
BsrBI	CCGCTC	1 cut(s)	1320
BsrFI	RCCGGY	5 cut(s)	233, 237, 287, 407, 1324
BsrGI	TGTACA	1 cut(s)	267
BsrI	ACTGG	2 cut(s)	199, 863
BssAI	RCCGGY	5 cut(s)	233, 237, 287, 407, 1324
BssHII	GCGCGC	1 cut(s)	933
BssMI	GATC	3 cut(s)	909, 1111, 1387
BssNI	GRCGYC	3 cut(s)	285, 759, 1406
BssT1I	CCWWGG	3 cut(s)	45, 228, 636
Bst2UI	CCWGG	4 cut(s)	176, 428, 437, 964
Bst4CI	ACNGT	5 cut(s)	31, 397, 1235, 1343, 1384
Bst6I	CTCTTC	1 cut(s)	149
BstACI	GRCGYC	3 cut(s)	285, 759, 1406
BstAUI	TGTACA	1 cut(s)	267
BstBAI	YACGTR	2 cut(s)	355, 1456
BstC8I	GCNNGC	6 cut(s)	235, 935, 1259, 1301, 1322, 1326
BstDEI	CTNAG	4 cut(s)	318, 603, 888, 1115
BstDSI	CCRYGG	4 cut(s)	45, 544, 765, 1205
BstEII	GGTNACC	1 cut(s)	439
BstF5I	GGATG	2 cut(s)	126, 1071
BstFNI	CGCG	6 cut(s)	546, 935, 960, 1085, 1127, 1207
BstH2I	RGCGCY	1 cut(s)	1409
BstHHI	GCGC	7 cut(s)	476, 935, 937, 962, 1127, 1156, 1408
BstKTI	GATC	3 cut(s)	912, 1114, 1390
BstMAI	GTCTC	4 cut(s)	72, 184, 328, 1089
BstMBI	GATC	3 cut(s)	909, 1111, 1387
BstMCI	CGRYCG	2 cut(s)	238, 771
BstMWI	GCNNNNNNNGC	4 cut(s)	408, 549, 555, 934
BstNI	CCWGG	4 cut(s)	176, 428, 437, 964
BstPAI	GACNNNNGTC	1 cut(s)	320
BstPI	GGTNACC	1 cut(s)	439
BstSCI	CCNGG	7 cut(s)	174, 426, 435, 581, 582, 962, 1360
BstSLI	GKGCMC	1 cut(s)	636
BstUI	CGCG	6 cut(s)	546, 935, 960, 1085, 1127, 1207
BstV1I	GCAGC	3 cut(s)	320, 914, 1144
BstX2I	RGATCY	2 cut(s)	909, 1111
BstXI	CCANNNNNNTGG	1 cut(s)	137
BstYI	RGATCY	2 cut(s)	909, 1111
BstZI	CGGCCG	2 cut(s)	235, 768
BsuRI	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1303, 1324
BtgI	CCRYGG	4 cut(s)	45, 544, 765, 1205
BtrI	CACGTC	1 cut(s)	1099
BtsCI	GGATG	2 cut(s)	126, 1071
BtsI	GCAGTG	1 cut(s)	1011
BtsIMutI	CAGTG	4 cut(s)	27, 492, 885, 1011
BveI	ACCTGC	1 cut(s)	284
Cac8I	GCNNGC	6 cut(s)	235, 935, 1259, 1301, 1322, 1326
CfoI	GCGC	7 cut(s)	476, 935, 937, 962, 1127, 1156, 1408
Cfr10I	RCCGGY	5 cut(s)	233, 237, 287, 407, 1324
Cfr13I	GGNCC	7 cut(s)	610, 632, 633, 744, 1039, 1322, 1380
Cfr42I	CCGCGG	2 cut(s)	547, 1208
Cfr9I	CCCGGG	1 cut(s)	582
CseI	GACGC	2 cut(s)	293, 1074
Csp6I	GTAC	4 cut(s)	268, 1045, 1081, 1276
CviAII	CATG	5 cut(s)	46, 109, 117, 332, 1447
CviQI	GTAC	4 cut(s)	268, 1045, 1081, 1276
DdeI	CTNAG	4 cut(s)	318, 603, 888, 1115
DinI	GGCGCC	1 cut(s)	1407
DpnI	GATC	3 cut(s)	911, 1113, 1389
DpnII	GATC	3 cut(s)	909, 1111, 1387
DrdI	GACNNNNNNGTC	1 cut(s)	1084
DriI	GACNNNNNGTC	2 cut(s)	340, 1102
DseDI	GACNNNNNNGTC	1 cut(s)	1084
EaeI	YGGCCR	4 cut(s)	231, 235, 409, 768
EagI	CGGCCG	2 cut(s)	235, 768
Eam1104I	CTCTTC	1 cut(s)	149
Eam1105I	GACNNNNNGTC	2 cut(s)	340, 1102
EarI	CTCTTC	1 cut(s)	149
Ecl136II	GAGCTC	1 cut(s)	448
EclXI	CGGCCG	2 cut(s)	235, 768
Eco130I	CCWWGG	3 cut(s)	45, 228, 636
Eco24I	GRGCYC	2 cut(s)	450, 636
Eco31I	GGTCTC	3 cut(s)	72, 184, 328
Eco47I	GGWCC	4 cut(s)	610, 744, 1039, 1380
Eco52I	CGGCCG	2 cut(s)	235, 768
Eco53kI	GAGCTC	1 cut(s)	448
Eco57I	CTGAAG	3 cut(s)	599, 664, 670
Eco72I	CACGTG	1 cut(s)	355
Eco88I	CYCGRG	3 cut(s)	582, 782, 1090
Eco91I	GGTNACC	1 cut(s)	439
EcoICRI	GAGCTC	1 cut(s)	448
EcoO65I	GGTNACC	1 cut(s)	439
EcoRI	GAATTC	1 cut(s)	868
EcoRII	CCWGG	4 cut(s)	174, 426, 435, 962
EcoT14I	CCWWGG	3 cut(s)	45, 228, 636
EcoT38I	GRGCYC	2 cut(s)	450, 636
EgeI	GGCGCC	1 cut(s)	1407
EheI	GGCGCC	1 cut(s)	1407
ErhI	CCWWGG	3 cut(s)	45, 228, 636
Esp3I	CGTCTC	1 cut(s)	1089
FaeI	CATG	5 cut(s)	49, 112, 120, 335, 1450
FaiI	YATR	6 cut(s)	47, 110, 118, 333, 1184, 1448
FalI	AAGNNNNNCTT	2 cut(s)	560, 592
FaqI	GGGAC	3 cut(s)	599, 1382, 1393
FatI	CATG	5 cut(s)	45, 108, 116, 331, 1446
FauI	CCCGC	5 cut(s)	231, 1200, 1212, 1313, 1414
Fnu4HI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 878, 903, 1133
FokI	GGATG	2 cut(s)	113, 1058
FriOI	GRGCYC	2 cut(s)	450, 636
FseI	GGCCGGCC	1 cut(s)	237
Fsp4HI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 878, 903, 1133
FspBI	CTAG	2 cut(s)	1107, 1220
GlaI	GCGC	7 cut(s)	475, 934, 936, 961, 1126, 1155, 1407
GluI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 878, 903, 1133
GsaI	CCCAGC	1 cut(s)	1380
GsuI	CTGGAG	3 cut(s)	547, 1046, 1412
HaeII	RGCGCY	1 cut(s)	1409
HaeIII	GGCC	9 cut(s)	141, 198, 233, 237, 411, 634, 770, 1303, 1324
HgaI	GACGC	2 cut(s)	293, 1074
HhaI	GCGC	7 cut(s)	476, 935, 937, 962, 1127, 1156, 1408
Hin1I	GRCGYC	3 cut(s)	285, 759, 1406
Hin1II	CATG	5 cut(s)	49, 112, 120, 335, 1450
Hin6I	GCGC	7 cut(s)	474, 933, 935, 960, 1125, 1154, 1406
HinP1I	GCGC	7 cut(s)	474, 933, 935, 960, 1125, 1154, 1406
HincII	GTYRAC	3 cut(s)	243, 655, 666
HindII	GTYRAC	3 cut(s)	243, 655, 666
HindIII	AAGCTT	1 cut(s)	86
HphI	GGTGA	6 cut(s)	139, 265, 379, 433, 571, 1183
Hpy166II	GTNNAC	4 cut(s)	243, 655, 666, 1009
Hpy8I	GTNNAC	4 cut(s)	243, 655, 666, 1009
HpyAV	CCTTC	9 cut(s)	15, 165, 364, 517, 538, 620, 623, 940, 1144
HpyCH4III	ACNGT	5 cut(s)	31, 397, 1235, 1343, 1384
HpyCH4IV	ACGT	8 cut(s)	354, 651, 759, 992, 1079, 1098, 1146, 1455
HpyCH4V	TGCA	6 cut(s)	279, 331, 383, 1182, 1238, 1450
HpyF10VI	GCNNNNNNNGC	4 cut(s)	408, 549, 555, 934
HpyF3I	CTNAG	4 cut(s)	318, 603, 888, 1115
HpySE526I	ACGT	8 cut(s)	354, 651, 759, 992, 1079, 1098, 1146, 1455
Hsp92I	GRCGYC	3 cut(s)	285, 759, 1406
Hsp92II	CATG	5 cut(s)	49, 112, 120, 335, 1450
HspAI	GCGC	7 cut(s)	474, 933, 935, 960, 1125, 1154, 1406
KasI	GGCGCC	1 cut(s)	1405
KroI	GCCGGC	2 cut(s)	233, 1324
KroNI	GCCGGC	2 cut(s)	235, 1326
KspI	CCGCGG	2 cut(s)	547, 1208
Kzo9I	GATC	3 cut(s)	909, 1111, 1387
LmnI	GCTCC	5 cut(s)	453, 1027, 1129, 1317, 1373
Lsp1109I	GCAGC	3 cut(s)	320, 914, 1144
LweI	GCATC	2 cut(s)	1080, 1247
MaeI	CTAG	2 cut(s)	1107, 1220
MaeII	ACGT	8 cut(s)	354, 651, 759, 992, 1079, 1098, 1146, 1455
MaeIII	GTNAC	8 cut(s)	119, 260, 439, 490, 640, 838, 952, 1016
MalI	GATC	3 cut(s)	911, 1113, 1389
MbiI	CCGCTC	1 cut(s)	1320
MboI	GATC	3 cut(s)	909, 1111, 1387
MboII	GAAGA	5 cut(s)	3, 136, 511, 670, 1210
MflI	RGATCY	2 cut(s)	909, 1111
MhlI	GDGCHC	2 cut(s)	450, 636
MluCI	AATT	2 cut(s)	868, 1334
MluI	ACGCGT	1 cut(s)	1083
Mly113I	GGCGCC	1 cut(s)	1406
MlyI	GAGTC	5 cut(s)	343, 371, 581, 986, 1439
MmeI	TCCRAC	1 cut(s)	1407
MroNI	GCCGGC	2 cut(s)	233, 1324
MroXI	GAANNNNTTC	2 cut(s)	518, 1334
MslI	CAYNNNNRTG	2 cut(s)	32, 1161
MspA1I	CMGCKG	4 cut(s)	311, 546, 905, 1207
MspR9I	CCNGG	7 cut(s)	176, 428, 437, 583, 584, 964, 1362
MvaI	CCWGG	4 cut(s)	176, 428, 437, 964
MvnI	CGCG	6 cut(s)	546, 935, 960, 1085, 1127, 1207
MwoI	GCNNNNNNNGC	4 cut(s)	408, 549, 555, 934
NaeI	GCCGGC	2 cut(s)	235, 1326
NarI	GGCGCC	1 cut(s)	1406
NciI	CCSGG	3 cut(s)	583, 584, 1362
NcoI	CCATGG	1 cut(s)	45
NdeII	GATC	3 cut(s)	909, 1111, 1387
NgoMIV	GCCGGC	2 cut(s)	233, 1324
NlaIII	CATG	5 cut(s)	49, 112, 120, 335, 1450
NlaIV	GGNNCC	7 cut(s)	502, 634, 746, 1029, 1041, 1381, 1407
NmeAIII	GCCGAG	2 cut(s)	559, 1287
NmuCI	GTSAC	6 cut(s)	119, 439, 490, 640, 952, 1016
OliI	CACNNNNGTG	2 cut(s)	32, 1161
PaqCI	CACCTGC	1 cut(s)	284
PauI	GCGCGC	1 cut(s)	933
PcsI	WCGNNNNNNNCGW	3 cut(s)	768, 804, 986
PdiI	GCCGGC	2 cut(s)	235, 1326
PdmI	GAANNNNTTC	2 cut(s)	518, 1334
PfeI	GAWTC	5 cut(s)	41, 592, 675, 778, 800
Pfl23II	CGTACG	1 cut(s)	1080
PflFI	GACNNNGTC	1 cut(s)	758
PflMI	CCANNNNNTGG	1 cut(s)	175
PkrI	GCNGC	8 cut(s)	310, 313, 545, 548, 551, 879, 904, 1134
PleI	GAGTC	5 cut(s)	343, 370, 581, 985, 1438
PluTI	GGCGCC	1 cut(s)	1409
PmaCI	CACGTG	1 cut(s)	355
PmlI	CACGTG	1 cut(s)	355
PpsI	GAGTC	5 cut(s)	343, 370, 581, 985, 1438
Ppu21I	YACGTR	2 cut(s)	355, 1456
PshAI	GACNNNNGTC	1 cut(s)	320
Psp124BI	GAGCTC	1 cut(s)	450
Psp6I	CCWGG	4 cut(s)	174, 426, 435, 962
PspCI	CACGTG	1 cut(s)	355
PspEI	GGTNACC	1 cut(s)	439
PspFI	CCCAGC	1 cut(s)	1376
PspGI	CCWGG	4 cut(s)	174, 426, 435, 962
PspLI	CGTACG	1 cut(s)	1080
PspN4I	GGNNCC	7 cut(s)	502, 634, 746, 1029, 1041, 1381, 1407
PspOMI	GGGCCC	1 cut(s)	632
PspPI	GGNCC	7 cut(s)	610, 632, 633, 744, 1039, 1322, 1380
PsuI	RGATCY	2 cut(s)	909, 1111
PsyI	GACNNNGTC	1 cut(s)	758
PteI	GCGCGC	1 cut(s)	933
RigI	GGCCGGCC	1 cut(s)	237
RsaI	GTAC	4 cut(s)	269, 1046, 1082, 1277
RsaNI	GTAC	4 cut(s)	268, 1045, 1081, 1276
RseI	CAYNNNNRTG	2 cut(s)	32, 1161
SacI	GAGCTC	1 cut(s)	450
SacII	CCGCGG	2 cut(s)	547, 1208
SatI	GCNGC	8 cut(s)	309, 312, 544, 547, 550, 878, 903, 1133
Sau3AI	GATC	3 cut(s)	909, 1111, 1387
Sau96I	GGNCC	7 cut(s)	610, 632, 633, 744, 1039, 1322, 1380
SchI	GAGTC	5 cut(s)	343, 371, 581, 986, 1439
ScrFI	CCNGG	7 cut(s)	176, 428, 437, 583, 584, 964, 1362
SduI	GDGCHC	2 cut(s)	450, 636
SfaNI	GCATC	2 cut(s)	1080, 1247
SfoI	GGCGCC	1 cut(s)	1407
Sfr303I	CCGCGG	2 cut(s)	547, 1208
SgrAI	CRCCGGYG	1 cut(s)	287
SgrBI	CCGCGG	2 cut(s)	547, 1208
SinI	GGWCC	4 cut(s)	610, 744, 1039, 1380
SmaI	CCCGGG	1 cut(s)	584
SmiMI	CAYNNNNRTG	2 cut(s)	32, 1161
SmlI	CTYRAG	2 cut(s)	83, 188
SmoI	CTYRAG	2 cut(s)	83, 188
Sse9I	AATT	2 cut(s)	868, 1334
SspDI	GGCGCC	1 cut(s)	1405
SspMI	CTAG	2 cut(s)	1107, 1220
SstI	GAGCTC	1 cut(s)	450
StyD4I	CCNGG	7 cut(s)	174, 426, 435, 581, 582, 962, 1360
StyI	CCWWGG	3 cut(s)	45, 228, 636
TaaI	ACNGT	5 cut(s)	31, 397, 1235, 1343, 1384
TaiI	ACGT	8 cut(s)	357, 654, 762, 995, 1082, 1101, 1149, 1458
TaqI	TCGA	6 cut(s)	590, 774, 852, 980, 1230, 1338
TaqII	GACCGA	1 cut(s)	683
TasI	AATT	2 cut(s)	868, 1334
TatI	WGTACW	1 cut(s)	267
TauI	GCSGC	5 cut(s)	314, 546, 549, 552, 880
TfiI	GAWTC	5 cut(s)	41, 592, 675, 778, 800
TscAI	CASTG	4 cut(s)	34, 499, 892, 1011
TseFI	GTSAC	6 cut(s)	119, 439, 490, 640, 952, 1016
TseI	GCWGC	3 cut(s)	308, 902, 1132
Tsp45I	GTSAC	6 cut(s)	119, 439, 490, 640, 952, 1016
TspDTI	ATGAA	2 cut(s)	454, 1435
TspGWI	ACGGA	4 cut(s)	263, 316, 471, 1386
TspMI	CCCGGG	1 cut(s)	582
TspRI	CASTG	4 cut(s)	34, 499, 892, 1011
Tth111I	GACNNNGTC	1 cut(s)	758
Van91I	CCANNNNNTGG	1 cut(s)	175
VpaK11BI	GGWCC	4 cut(s)	610, 744, 1039, 1380
XapI	RAATTY	2 cut(s)	868, 1334
XmaI	CCCGGG	1 cut(s)	582
XmnI	GAANNNNTTC	2 cut(s)	518, 1334
XspI	CTAG	2 cut(s)	1107, 1220
ZraI	GACGTC	1 cut(s)	760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.