Rh1DG338600

Belongs to the actin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0014363
Physical Location & Seq
Reverse (-)
56389984 .. 56394830
4847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG338600.1

Sequence Viewer

Length: 1683 bp
ATGCCTTTCATATCCAAAATTCAGCGCCAGACCGATTACCGGCGCTTCCCTTCCTCCACCCCCATCGTCATCGACAATGGCGCCTCCTATTTCCGCATCGGATGGGCTGGAGAGCCAGAGCCTCGTGTTATCTTCCGCAATATTGTTCAGAGACCCCGCCACAAAGTCACTGGTGAAACTGTGACCATAGTTGGTGATCATGATGTCGCTTTGTTGAGATCCTTTGATTGCACGCGCTCGGGACCTCGGTCGGCTTTTGATAACAATGTGGTTTACCAGTTTGAAATAATGGAATATATTCTTGACTTTGCTTTTGATCGACTGGGGGCTGATGGATCAAAGATTGATCATCCTATCCTGATTACAGAATGCGTATGCAACCCATTTCAGTCTCGTAGTAAGATGGCGGAACTACTATTTGACACATATGGAGTCCCATCGATAGCATATGGTGTTGATGCTGCATTCAGCTACAAGTATAATCAACATCATGGGGTTTGTAATAAAGACGGTCTTGCTATCTGTCCTGGATTTATGACTACTCATGTTATTCCGTTTATTGATGGTGAGCCTGAGTATAAAGGATGCTGTCGGACTAACATTGGTGGGTACCACATCACTGACTATCTGAAGCAACTTCTTTCACTTAAATACCCCCATCACATGGCTAGGTTTACATGGGAGAAGGTCGAAGACTTGAAGATGGAGCACTGTTATATTGCTCTAGATTATATGTCAGAAGCTCGACTATTTCAGAATGGAACCAAGGAAGCTGAAGATAAAACAAGGTCTTGGCAGCTCCCATGGGTTCCACCACCTACTGAGGAGCCTCCTTCTGAAGAAGAGATTGCAAGAAAGGCAGCCATAAAAGAGAAACAAGGTCAACGGTTGCGAGAAATGGCTGAAGCGAAAAGATCTTCTAGGATAAATGAACTAGAAAATGAATCACATGGTTTGGAATTTCTGTTAAAGCAGCTTGAACAGGTGGAAGAGCATGATATACGATCTTTCTTGTCAGCGACTGGATATGTCTCCAGGAAGGAAGTAGAATCTGCCCTTTTGAAAGTAACACAATCTCTACAAAAAGCAAAGGGTGAACAAGCTGAGTTTGAGGAGAAACCAGATGCAGAAAGGTTTCATCTTTTAAATAAACCTGACCACGAGTGCACTCCAGAAGAGCTCAAGATGAAAAAGAGACAGGTGTTTCTAAAATCCACATCTGAAGGCCGTCAGCGAGCTAAACAGAAACGCCATGAAGAAGAACTGGAGCGAGAAAGGAGAAACCAACAAGATGAGCAAAGACGTTCAAAGAACCCCGAGCTTTATAAAGAGCAGTTGCTTGCTAAATATAAAGATCTTTCTGAGAAAGTGGAACAGCGAAAACGACTCAAGACAAATGGGGGTCAGACAAATGGGAATAATATTTCTGGAAATGTTGGCCGTGGCGAGAGATTAAATGCTGCACAGAGGGAAAGGATGCGCCTTTTGACCACAGCAGCTTTTGATCGCGGCAAGGGTGAGGATACTTTTGGTGCAAGAGATGAAGATTGGCAACTATACAAGCTAATGAGCAAAGATAATGACGATGATGATGAGGGCCCGGATGCGGATGAAGCAGAGTTGGCACGTCTAACTTCTAGGCTTCGGGTCTGTTTATTTGGTTCACTTAAATGCTTTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Actin

Protein Analysis

560

Amino Acids

64.69

Weight (kDa)

6.37

Isoelectric Point (pI)

51.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Actin PF00022 19 - 236 1.1e-28 Actin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G12380 AT3G12380
fragaria_vesca FvH4_7g22790
malus_domestica MD01G1136100.v1.1
prunus_persica Prupe.2G237600_v2.0.a1 Prupe.2G237600_v2.0.a1
pyrus_communis pycom01g15690
rosa_chinensis RchiOBHm_Chr1g0367891
rosa_laevigata RLG00000027259
rosa_multiflora Rmu_ssc0000395.1_g000040
rosa_roxburghii Rroxscaffold_4G00289150
rosa_rugosa Rorug01G0337500
rosa_samantha Rh1AG344400 Rh1BG306400 Rh1CG322000 Rh1DG338600
rosa_wichuraiana Rw1G030660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1326
Acc65I GGTACC 1 cut(s) 609
AccB1I GGYRCC 2 cut(s) 80, 609
AccB7I CCANNNNNTGG 1 cut(s) 664
AccII CGCG 2 cut(s) 235, 1509
AciI CCGC 6 cut(s) 94, 136, 157, 407, 1509, 1607
AclWI GGATC 2 cut(s) 213, 343
AcoI YGGCCR 1 cut(s) 1438
AcsI RAATTY 2 cut(s) 18, 959
AcuI CTGAAG 5 cut(s) 650, 795, 858, 924, 1242
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 1 cut(s) 611
AfiI CCNNNNNNNGG 3 cut(s) 39, 664, 1606
AgsI TTSAA 5 cut(s) 284, 700, 980, 1063, 1308
AjiI CACGTC 1 cut(s) 1628
AjnI CCWGG 2 cut(s) 526, 1034
Alw21I GWGCWC 3 cut(s) 711, 1169, 1182
Alw26I GTCTC 4 cut(s) 145, 396, 1036, 1189
Alw44I GTGCAC 1 cut(s) 1165
AlwI GGATC 2 cut(s) 213, 343
AlwNI CAGNNNCTG 1 cut(s) 1022
Ama87I CYCGRG 2 cut(s) 238, 1316
AoxI GGCC 3 cut(s) 1225, 1438, 1597
ApaI GGGCCC 1 cut(s) 1601
ApaLI GTGCAC 1 cut(s) 1165
ApeKI GCWGC 6 cut(s) 461, 796, 860, 973, 1460, 1496
ApoI RAATTY 2 cut(s) 18, 959
ArsI GACNNNNNNTTYG 2 cut(s) 296, 328
Asp700I GAANNNNTTC 2 cut(s) 297, 1134
Asp718I GGTACC 1 cut(s) 609
AspLEI GCGC 5 cut(s) 27, 45, 83, 237, 1482
AspS9I GGNCC 3 cut(s) 242, 1597, 1598
AsuC2I CCSGG 1 cut(s) 1601
AsuHPI GGTGA 5 cut(s) 185, 206, 578, 1106, 1529
AvaI CYCGRG 2 cut(s) 238, 1316
AvaII GGWCC 1 cut(s) 242
BaeGI GKGCMC 2 cut(s) 1169, 1601
BanI GGYRCC 2 cut(s) 80, 609
BanII GRGCYC 2 cut(s) 1182, 1601
BauI CACGAG 2 cut(s) 123, 1160
BbsI GAAGAC 1 cut(s) 699
Bbv12I GWGCWC 3 cut(s) 711, 1169, 1182
BbvI GCAGC 6 cut(s) 448, 808, 872, 985, 1447, 1508
BccI CCATC 8 cut(s) 71, 96, 326, 397, 445, 557, 666, 697
BceAI ACGGC 2 cut(s) 1212, 1425
BciT130I CCWGG 2 cut(s) 528, 1036
BciVI GTATCC 1 cut(s) 1516
BclI TGATCA 2 cut(s) 196, 346
BcnI CCSGG 1 cut(s) 1601
BcoDI GTCTC 4 cut(s) 145, 396, 1036, 1189
BfaI CTAG 5 cut(s) 669, 725, 921, 935, 1638
BfoI RGCGCY 3 cut(s) 28, 46, 84
BfuI GTATCC 1 cut(s) 1516
BglII AGATCT 2 cut(s) 914, 1354
BisI GCNGC 7 cut(s) 462, 797, 861, 974, 1461, 1497, 1510
BlsI GCNGC 7 cut(s) 463, 798, 862, 975, 1462, 1498, 1511
Bme1390I CCNGG 3 cut(s) 528, 1036, 1601
Bme18I GGWCC 1 cut(s) 242
BmeT110I CYCGRG 2 cut(s) 238, 1316
BmgBI CACGTC 1 cut(s) 1628
BmgT120I GGNCC 3 cut(s) 242, 1597, 1598
BmiI GGNNCC 7 cut(s) 82, 243, 611, 763, 810, 828, 1599
BmrFI CCNGG 3 cut(s) 528, 1036, 1601
BmrI ACTGGG 1 cut(s) 332
BmsI GCATC 6 cut(s) 105, 448, 575, 1114, 1467, 1594
BmuI ACTGGG 1 cut(s) 332
BoxI GACNNNNGTC 1 cut(s) 247
BpiI GAAGAC 1 cut(s) 699
BpmI CTGGAG 4 cut(s) 129, 1018, 1155, 1286
BpuEI CTTGAG 2 cut(s) 1166, 1373
BpuMI CCSGG 1 cut(s) 1601
Bsa29I ATCGAT 1 cut(s) 440
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 145
BsaJI CCNNGG 4 cut(s) 245, 765, 803, 1441
Bsc4I CCNNNNNNNGG 3 cut(s) 39, 664, 1606
Bse118I RCCGGY 1 cut(s) 39
Bse1I ACTGG 5 cut(s) 175, 277, 327, 1027, 1269
BseBI CCWGG 2 cut(s) 528, 1036
BseCI ATCGAT 1 cut(s) 440
BseDI CCNNGG 4 cut(s) 245, 765, 803, 1441
BseGI GGATG 6 cut(s) 107, 349, 590, 1482, 1609, 1615
BseLI CCNNNNNNNGG 3 cut(s) 39, 664, 1606
BseMII CTCAG 4 cut(s) 564, 813, 1095, 1353
BseNI ACTGG 5 cut(s) 175, 277, 327, 1027, 1269
BseRI GAGGAG 2 cut(s) 839, 1127
BseSI GKGCMC 2 cut(s) 1169, 1601
BseXI GCAGC 6 cut(s) 448, 808, 872, 985, 1447, 1508
BsgI GTGCAG 1 cut(s) 1446
Bsh1236I CGCG 2 cut(s) 235, 1509
Bsh1285I CGRYCG 1 cut(s) 251
BshFI GGCC 3 cut(s) 1227, 1440, 1599
BshNI GGYRCC 2 cut(s) 80, 609
BshVI ATCGAT 1 cut(s) 440
BsiEI CGRYCG 1 cut(s) 251
BsiHKAI GWGCWC 3 cut(s) 711, 1169, 1182
BsiHKCI CYCGRG 2 cut(s) 238, 1316
BsiSI CCGG 2 cut(s) 40, 1601
BslFI GGGAC 2 cut(s) 255, 419
BslI CCNNNNNNNGG 3 cut(s) 39, 664, 1606
BsmAI GTCTC 4 cut(s) 145, 396, 1036, 1189
BsmFI GGGAC 2 cut(s) 255, 419
BsmI GAATGC 2 cut(s) 374, 464
BsnI GGCC 3 cut(s) 1227, 1440, 1599
Bso31I GGTCTC 1 cut(s) 145
BsoBI CYCGRG 2 cut(s) 238, 1316
Bsp120I GGGCCC 1 cut(s) 1597
Bsp1286I GDGCHC 4 cut(s) 711, 1169, 1182, 1601
Bsp143I GATC 9 cut(s) 196, 218, 316, 335, 346, 914, 1004, 1354, 1504
Bsp19I CCATGG 1 cut(s) 803
BspACI CCGC 6 cut(s) 94, 136, 157, 407, 1509, 1607
BspANI GGCC 3 cut(s) 1227, 1440, 1599
BspCNI CTCAG 4 cut(s) 565, 814, 1096, 1354
BspDI ATCGAT 1 cut(s) 440
BspFNI CGCG 2 cut(s) 235, 1509
BspHI TCATGA 1 cut(s) 199
BspLI GGNNCC 7 cut(s) 82, 243, 611, 763, 810, 828, 1599
BspPI GGATC 2 cut(s) 213, 343
BspQI GCTCTTC 2 cut(s) 984, 1170
BspT107I GGYRCC 2 cut(s) 80, 609
BspTNI GGTCTC 1 cut(s) 145
BsrFI RCCGGY 1 cut(s) 39
BsrI ACTGG 5 cut(s) 175, 277, 327, 1027, 1269
BssAI RCCGGY 1 cut(s) 39
BssECI CCNNGG 4 cut(s) 245, 765, 803, 1441
BssMI GATC 9 cut(s) 196, 218, 316, 335, 346, 914, 1004, 1354, 1504
BssNI GRCGYC 1 cut(s) 81
BssSI CACGAG 2 cut(s) 123, 1160
BssT1I CCWWGG 2 cut(s) 765, 803
Bst2BI CACGAG 2 cut(s) 123, 1160
Bst2UI CCWGG 2 cut(s) 528, 1036
Bst4CI ACNGT 4 cut(s) 181, 512, 713, 888
Bst6I CTCTTC 3 cut(s) 837, 984, 1170
BstACI GRCGYC 1 cut(s) 81
BstC8I GCNNGC 3 cut(s) 233, 1236, 1341
BstDEI CTNAG 4 cut(s) 573, 822, 1104, 1362
BstDSI CCRYGG 2 cut(s) 803, 1441
BstF5I GGATG 6 cut(s) 107, 349, 590, 1482, 1609, 1615
BstFNI CGCG 2 cut(s) 235, 1509
BstH2I RGCGCY 3 cut(s) 28, 46, 84
BstHHI GCGC 5 cut(s) 27, 45, 83, 237, 1482
BstKTI GATC 9 cut(s) 199, 221, 319, 338, 349, 917, 1007, 1357, 1507
BstMAI GTCTC 4 cut(s) 145, 396, 1036, 1189
BstMBI GATC 9 cut(s) 196, 218, 316, 335, 346, 914, 1004, 1354, 1504
BstMCI CGRYCG 1 cut(s) 251
BstMWI GCNNNNNNNGC 3 cut(s) 857, 1613, 1622
BstNI CCWGG 2 cut(s) 528, 1036
BstPAI GACNNNNGTC 1 cut(s) 247
BstSCI CCNGG 3 cut(s) 526, 1034, 1599
BstSLI GKGCMC 2 cut(s) 1169, 1601
BstUI CGCG 2 cut(s) 235, 1509
BstV1I GCAGC 6 cut(s) 448, 808, 872, 985, 1447, 1508
BstV2I GAAGAC 1 cut(s) 699
BstX2I RGATCY 3 cut(s) 218, 914, 1354
BstYI RGATCY 3 cut(s) 218, 914, 1354
Bsu15I ATCGAT 1 cut(s) 440
BsuI GTATCC 1 cut(s) 1516
BsuRI GGCC 3 cut(s) 1227, 1440, 1599
BsuTUI ATCGAT 1 cut(s) 440
BtgI CCRYGG 2 cut(s) 803, 1441
BtrI CACGTC 1 cut(s) 1628
BtsCI GGATG 6 cut(s) 107, 349, 590, 1482, 1609, 1615
BtsIMutI CAGTG 3 cut(s) 168, 618, 709
Cac8I GCNNGC 3 cut(s) 233, 1236, 1341
CaiI CAGNNNCTG 1 cut(s) 1022
CciI TCATGA 1 cut(s) 199
CfoI GCGC 5 cut(s) 27, 45, 83, 237, 1482
Cfr10I RCCGGY 1 cut(s) 39
Cfr13I GGNCC 3 cut(s) 242, 1597, 1598
ClaI ATCGAT 1 cut(s) 440
Csp6I GTAC 1 cut(s) 610
CviAII CATG 9 cut(s) 200, 491, 545, 664, 678, 804, 950, 995, 1253
CviQI GTAC 1 cut(s) 610
DdeI CTNAG 4 cut(s) 573, 822, 1104, 1362
DinI GGCGCC 1 cut(s) 82
DpnI GATC 9 cut(s) 198, 220, 318, 337, 348, 916, 1006, 1356, 1506
DpnII GATC 9 cut(s) 196, 218, 316, 335, 346, 914, 1004, 1354, 1504
DraI TTTAAA 1 cut(s) 1146
EaeI YGGCCR 1 cut(s) 1438
Eam1104I CTCTTC 3 cut(s) 837, 984, 1170
EarI CTCTTC 3 cut(s) 837, 984, 1170
EciI GGCGGA 1 cut(s) 422
Ecl136II GAGCTC 1 cut(s) 1180
Eco130I CCWWGG 2 cut(s) 765, 803
Eco24I GRGCYC 2 cut(s) 1182, 1601
Eco31I GGTCTC 1 cut(s) 145
Eco47I GGWCC 1 cut(s) 242
Eco53kI GAGCTC 1 cut(s) 1180
Eco57I CTGAAG 5 cut(s) 650, 795, 858, 924, 1242
Eco88I CYCGRG 2 cut(s) 238, 1316
EcoICRI GAGCTC 1 cut(s) 1180
EcoO109I RGGNCCY 2 cut(s) 242, 1597
EcoRII CCWGG 2 cut(s) 526, 1034
EcoT14I CCWWGG 2 cut(s) 765, 803
EcoT38I GRGCYC 2 cut(s) 1182, 1601
EgeI GGCGCC 1 cut(s) 82
EheI GGCGCC 1 cut(s) 82
ErhI CCWWGG 2 cut(s) 765, 803
FaeI CATG 9 cut(s) 203, 494, 548, 667, 681, 807, 953, 998, 1256
FalI AAGNNNNNCTT 2 cut(s) 498, 530
FaqI GGGAC 2 cut(s) 255, 419
FatI CATG 9 cut(s) 199, 490, 544, 663, 677, 803, 949, 994, 1252
FauI CCCGC 1 cut(s) 164
FauNDI CATATG 2 cut(s) 427, 448
FbaI TGATCA 2 cut(s) 196, 346
Fnu4HI GCNGC 7 cut(s) 462, 797, 861, 974, 1461, 1497, 1510
FokI GGATG 6 cut(s) 114, 336, 597, 1489, 1616, 1622
FriOI GRGCYC 2 cut(s) 1182, 1601
Fsp4HI GCNGC 7 cut(s) 462, 797, 861, 974, 1461, 1497, 1510
FspBI CTAG 5 cut(s) 669, 725, 921, 935, 1638
GlaI GCGC 5 cut(s) 26, 44, 82, 236, 1481
GluI GCNGC 7 cut(s) 462, 797, 861, 974, 1461, 1497, 1510
GsuI CTGGAG 4 cut(s) 129, 1018, 1155, 1286
HaeII RGCGCY 3 cut(s) 28, 46, 84
HaeIII GGCC 3 cut(s) 1227, 1440, 1599
HapII CCGG 2 cut(s) 40, 1601
HhaI GCGC 5 cut(s) 27, 45, 83, 237, 1482
Hin1I GRCGYC 1 cut(s) 81
Hin1II CATG 9 cut(s) 203, 494, 548, 667, 681, 807, 953, 998, 1256
Hin6I GCGC 5 cut(s) 25, 43, 81, 235, 1480
HinP1I GCGC 5 cut(s) 25, 43, 81, 235, 1480
HincII GTYRAC 1 cut(s) 884
HindII GTYRAC 1 cut(s) 884
HinfI GANTC 4 cut(s) 432, 944, 1049, 1386
HpaII CCGG 2 cut(s) 40, 1601
HphI GGTGA 5 cut(s) 185, 206, 578, 1106, 1529
Hpy166II GTNNAC 6 cut(s) 274, 675, 884, 1097, 1167, 1664
Hpy188III TCNNGA 9 cut(s) 200, 240, 302, 358, 725, 1172, 1183, 1390, 1428
Hpy8I GTNNAC 6 cut(s) 274, 675, 884, 1097, 1167, 1664
HpyAV CCTTC 5 cut(s) 60, 679, 843, 1033, 1217
HpyCH4III ACNGT 4 cut(s) 181, 512, 713, 888
HpyCH4IV ACGT 2 cut(s) 1303, 1627
HpyCH4V TGCA 8 cut(s) 231, 378, 464, 851, 1127, 1167, 1463, 1535
HpyF10VI GCNNNNNNNGC 3 cut(s) 857, 1613, 1622
HpyF3I CTNAG 4 cut(s) 573, 822, 1104, 1362
HpySE526I ACGT 2 cut(s) 1303, 1627
Hsp92I GRCGYC 1 cut(s) 81
Hsp92II CATG 9 cut(s) 203, 494, 548, 667, 681, 807, 953, 998, 1256
HspAI GCGC 5 cut(s) 25, 43, 81, 235, 1480
KasI GGCGCC 1 cut(s) 80
KpnI GGTACC 1 cut(s) 613
Ksp22I TGATCA 2 cut(s) 196, 346
Kzo9I GATC 9 cut(s) 196, 218, 316, 335, 346, 914, 1004, 1354, 1504
LguI GCTCTTC 2 cut(s) 984, 1170
LmnI GCTCC 4 cut(s) 706, 804, 826, 1267
Lsp1109I GCAGC 6 cut(s) 448, 808, 872, 985, 1447, 1508
LweI GCATC 6 cut(s) 105, 448, 575, 1114, 1467, 1594
MaeI CTAG 5 cut(s) 669, 725, 921, 935, 1638
MaeII ACGT 2 cut(s) 1303, 1627
MaeIII GTNAC 3 cut(s) 166, 181, 1066
MalI GATC 9 cut(s) 198, 220, 318, 337, 348, 916, 1006, 1356, 1506
MboI GATC 9 cut(s) 196, 218, 316, 335, 346, 914, 1004, 1354, 1504
MflI RGATCY 3 cut(s) 218, 914, 1354
MhlI GDGCHC 4 cut(s) 711, 1169, 1182, 1601
MluCI AATT 2 cut(s) 18, 959
Mly113I GGCGCC 1 cut(s) 81
MlyI GAGTC 2 cut(s) 441, 1380
MmeI TCCRAC 1 cut(s) 572
MroXI GAANNNNTTC 2 cut(s) 297, 1134
MseI TTAA 5 cut(s) 648, 968, 1145, 1454, 1668
MslI CAYNNNNRTG 1 cut(s) 1669
MspI CCGG 2 cut(s) 40, 1601
MspR9I CCNGG 3 cut(s) 528, 1036, 1601
Mva1269I GAATGC 2 cut(s) 374, 464
MvaI CCWGG 2 cut(s) 528, 1036
MvnI CGCG 2 cut(s) 235, 1509
MwoI GCNNNNNNNGC 3 cut(s) 857, 1613, 1622
NarI GGCGCC 1 cut(s) 81
NciI CCSGG 1 cut(s) 1601
NcoI CCATGG 1 cut(s) 803
NdeI CATATG 2 cut(s) 427, 448
NdeII GATC 9 cut(s) 196, 218, 316, 335, 346, 914, 1004, 1354, 1504
NlaIII CATG 9 cut(s) 203, 494, 548, 667, 681, 807, 953, 998, 1256
NlaIV GGNNCC 7 cut(s) 82, 243, 611, 763, 810, 828, 1599
NmuCI GTSAC 2 cut(s) 166, 181
PagI TCATGA 1 cut(s) 199
PciSI GCTCTTC 2 cut(s) 984, 1170
PctI GAATGC 2 cut(s) 374, 464
PdmI GAANNNNTTC 2 cut(s) 297, 1134
PfeI GAWTC 2 cut(s) 944, 1049
PflMI CCANNNNNTGG 1 cut(s) 664
PfoI TCCNGGA 2 cut(s) 526, 1034
PkrI GCNGC 7 cut(s) 463, 798, 862, 975, 1462, 1498, 1511
PleI GAGTC 2 cut(s) 440, 1380
PluTI GGCGCC 1 cut(s) 84
PpsI GAGTC 2 cut(s) 440, 1380
PpuMI RGGWCCY 1 cut(s) 242
PshAI GACNNNNGTC 1 cut(s) 247
PsiI TTATAA 1 cut(s) 1326
Psp124BI GAGCTC 1 cut(s) 1182
Psp5II RGGWCCY 1 cut(s) 242
Psp6I CCWGG 2 cut(s) 526, 1034
PspGI CCWGG 2 cut(s) 526, 1034
PspN4I GGNNCC 7 cut(s) 82, 243, 611, 763, 810, 828, 1599
PspOMI GGGCCC 1 cut(s) 1597
PspPI GGNCC 3 cut(s) 242, 1597, 1598
PspPPI RGGWCCY 1 cut(s) 242
PstNI CAGNNNCTG 1 cut(s) 1022
PsuI RGATCY 3 cut(s) 218, 914, 1354
RsaI GTAC 1 cut(s) 611
RsaNI GTAC 1 cut(s) 610
RseI CAYNNNNRTG 1 cut(s) 1669
SacI GAGCTC 1 cut(s) 1182
SapI GCTCTTC 2 cut(s) 984, 1170
SaqAI TTAA 5 cut(s) 648, 968, 1145, 1454, 1668
SatI GCNGC 7 cut(s) 462, 797, 861, 974, 1461, 1497, 1510
Sau3AI GATC 9 cut(s) 196, 218, 316, 335, 346, 914, 1004, 1354, 1504
Sau96I GGNCC 3 cut(s) 242, 1597, 1598
SchI GAGTC 2 cut(s) 441, 1380
ScrFI CCNGG 3 cut(s) 528, 1036, 1601
SduI GDGCHC 4 cut(s) 711, 1169, 1182, 1601
SfaNI GCATC 6 cut(s) 105, 448, 575, 1114, 1467, 1594
SfoI GGCGCC 1 cut(s) 82
SinI GGWCC 1 cut(s) 242
SmiMI CAYNNNNRTG 1 cut(s) 1669
SmlI CTYRAG 2 cut(s) 1181, 1388
SmoI CTYRAG 2 cut(s) 1181, 1388
Sse9I AATT 2 cut(s) 18, 959
SsiI CCGC 6 cut(s) 94, 136, 157, 407, 1509, 1607
SspDI GGCGCC 1 cut(s) 80
SspI AATATT 2 cut(s) 142, 1423
SspMI CTAG 5 cut(s) 669, 725, 921, 935, 1638
SstI GAGCTC 1 cut(s) 1182
StyD4I CCNGG 3 cut(s) 526, 1034, 1599
StyI CCWWGG 2 cut(s) 765, 803
TaaI ACNGT 4 cut(s) 181, 512, 713, 888
TaiI ACGT 2 cut(s) 1306, 1630
TaqI TCGA 5 cut(s) 72, 319, 440, 690, 745
TaqII GACCGA 2 cut(s) 47, 237
TasI AATT 2 cut(s) 18, 959
TauI GCSGC 1 cut(s) 1512
TfiI GAWTC 2 cut(s) 944, 1049
Tru1I TTAA 5 cut(s) 648, 968, 1145, 1454, 1668
Tru9I TTAA 5 cut(s) 648, 968, 1145, 1454, 1668
TscAI CASTG 3 cut(s) 175, 625, 716
TseFI GTSAC 2 cut(s) 166, 181
TseI GCWGC 6 cut(s) 461, 796, 860, 973, 1460, 1496
Tsp45I GTSAC 2 cut(s) 166, 181
TspDTI ATGAA 7 cut(s) 945, 957, 1127, 1202, 1269, 1557, 1626
TspGWI ACGGA 1 cut(s) 543
TspRI CASTG 3 cut(s) 175, 625, 716
Van91I CCANNNNNTGG 1 cut(s) 664
VneI GTGCAC 1 cut(s) 1165
VpaK11BI GGWCC 1 cut(s) 242
XapI RAATTY 2 cut(s) 18, 959
XbaI TCTAGA 1 cut(s) 724
XcmI CCANNNNNNNNNTGG 1 cut(s) 167
XmnI GAANNNNTTC 2 cut(s) 297, 1134
XspI CTAG 5 cut(s) 669, 725, 921, 935, 1638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.