Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0015349

Physical Location & Seq

Genomic Coordinates Reverse (-)

61192952 .. 61207699

Gene Structure 14748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG394200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGCTATCCATTCCGGAACAACCGTTGCCGGTACTCCAACAAAAGCGGCCCAAAAGCCCAGAACCTCTCAACTTACTCAGCTCGCTCAAGCAGCTCATCCACCACCCCCGGACATGGCTACTCATGGCCATACTTTCCCTCCAAGTCATACTCCTCTTTTCTCTCGGCACCCGCCGTTTCTCCCGCCAAGACCTCCCTCCGCCGTATGGTTCTGTGGCTGGATCAATAGTCCTTCCCGAACAGCAGGAAGAACAAGACGAATGCTGTTCGGGTCGGGTTTTCGTCTACGACTTACCGAAAACTCTCAATCAAGAGATTCTACAAAACTGCGACAACCTCAATCCGTGGAGCTCGCGCTGCGACGCGCTGGCGAACGACGGGTTCGGTCAGCCGGCAATCGGGATCGCCGGAGTGGTGCCGGAGAATCTTGCTCCGGCGTGGTACTGGACCGACCAGTTCGTATCGGAGGTGATTTTCCACAATCGGATCATGCACCACAAGTGCCGGGTCATGGCGCCGGAAAACGCCACGGCGTTTTACATCCCCTTCTACGTCGGTCTCGCCGTCGGGAAGTACTTATGGTCGAACACCTCCACCGCCCAGGACCGCGATCGCCACTGCGAAATGATGCTGAGCTGGGTCCAGGACCAGCCGTACTACAAGAGATCCGACGGCTGGGATCACTTCATCACCATGGGCCGGATCACCTGGGACTTCCGCCGCTCCAGGGACCCGGAATGGGGCTCCGGCTGCATGTACAAGCCGGGGATGCGTAACATCACGCGCCTCCTCATCGAGCGGAACCCCTGGGACTACTTCGACGTCGGTGTTCCCTACCCCACCGGATTCCACCCCAGAACTGATGCTGACGTCACGAAGTGGCAGGGCTTCGTCACGAACCGGAACAGAACCAAGCTCTTCTGTTTCGCGGGAGCCAAGCGCAGCCTTATCAGGAACGATTTCCGAGGACTGTTACTGAGTCACTGCCAGAACGAGTCGGACTCGTGCCGGGTCGTGGACTGCGGCGGGTCCAAATGCTCCAACGGCACGTCGGCGATTCTCGAAACGTTTCTCGACTCGGATTTCTGCCTCCAGCCGAGAGGGGATAGCTTCACCCGGAGGTCGATTTTTGACTGCATGGTGGCCGGTTCGATCCCTGTTTTTTTCTGGAAGCGGACCGCGTATTTCCAGTACGAGTGGTTTTTACCGGGCGAACCGGATAGTTACTCAGTTTTCATCGACCGGAACGCCGTAAAAAACGGGACGGCCTCGATAAAAAACGTGCTCGCCGGTTACAGTAGAGAAGAGGTGAGAAAAATGCGGGAGAAAGTCATCGATTACATTCCGAATTTTCTGTATGCAAAACCCCAGGAAGGGTTGGAGACGGTAAAAGACGCTTTTGACATTGCCCTTGAAGGTGTGTTGAGGAGGTTCAAGGAGCAAGGAGAGTGGGGGTTCAAGTGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0008378 GO:0009058 GO:0009059 GO:0009250 GO:0009969 GO:0009987 GO:0010383 GO:0010410 GO:0010411 GO:0012505 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0071554 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exostosin

Protein Analysis

489

Amino Acids

56.35

Weight (kDa)

8.12

Isoelectric Point (pI)

53.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exostosin_GT47	PF03016	91 - 426	5.6e-70	Exostosin GT47 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62220
fragaria_vesca	FvH4_7g28370
malus_domestica	MD01G1187600.v1.1
prunus_persica	Prupe.2G284000_v2.0.a1
pyrus_communis	pycom01g19950
rosa_chinensis	RchiOBHm_Chr1g0375351
rosa_laevigata	RLG00000026669
rosa_multiflora	Rmu_sc0000554.1_g000040 Rmu_ssc0000106.1_g000004
rosa_roxburghii	Rroxscaffold_4G00282820
rosa_rugosa	Rorug01G0390400
rosa_samantha	Rh1AG400900 Rh1BG363400 Rh1CG376700 Rh1DG394200
rosa_wichuraiana	Rw1G035590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	825, 873
AccB1I	GGYRCC	3 cut(s)	167, 415, 514
AccBSI	CCGCTC	2 cut(s)	723, 799
AccI	GTMKAC	1 cut(s)	285
AccII	CGCG	6 cut(s)	355, 365, 609, 784, 929, 1181
AccIII	TCCGGA	1 cut(s)	13
AclI	AACGTT	1 cut(s)	1067
AclWI	GGATC	7 cut(s)	229, 410, 494, 660, 687, 710, 1147
AcoI	YGGCCR	2 cut(s)	126, 1143
AcsI	RAATTY	1 cut(s)	1348
AcyI	GRCGYC	3 cut(s)	515, 822, 870
AdeI	CACNNNGTG	1 cut(s)	879
AfaI	GTAC	6 cut(s)	33, 443, 575, 656, 758, 1193
AgsI	TTSAA	3 cut(s)	1415, 1435, 1459
AjiI	CACGTC	1 cut(s)	1050
AjnI	CCWGG	6 cut(s)	600, 642, 707, 725, 806, 1368
AluBI	AGCT	6 cut(s)	81, 94, 351, 636, 916, 1110
AluI	AGCT	6 cut(s)	81, 94, 351, 636, 916, 1110
Alw21I	GWGCWC	2 cut(s)	353, 1287
Alw26I	GTCTC	2 cut(s)	563, 1376
AlwI	GGATC	7 cut(s)	229, 410, 494, 660, 687, 710, 1147
Aor13HI	TCCGGA	1 cut(s)	13
AoxI	GGCC	5 cut(s)	47, 126, 697, 1143, 1266
ApeKI	GCWGC	4 cut(s)	91, 357, 750, 942
ApoI	RAATTY	1 cut(s)	1348
AsiSI	GCGATCGC	1 cut(s)	613
Asp700I	GAANNNNTTC	2 cut(s)	959, 1068
AspLEI	GCGC	5 cut(s)	357, 367, 517, 786, 942
AspS9I	GGNCC	9 cut(s)	48, 447, 604, 640, 646, 697, 730, 1029, 1176
AsuC2I	CCSGG	7 cut(s)	109, 506, 734, 765, 1010, 1117, 1209
AsuHPI	GGTGA	5 cut(s)	481, 682, 697, 1105, 1321
AvaII	GGWCC	7 cut(s)	447, 604, 640, 646, 730, 1029, 1176
BalI	TGGCCA	1 cut(s)	128
BanI	GGYRCC	3 cut(s)	167, 415, 514
BanII	GRGCYC	2 cut(s)	353, 746
BauI	CACGAG	1 cut(s)	1003
Bbv12I	GWGCWC	2 cut(s)	353, 1287
BbvI	GCAGC	4 cut(s)	103, 344, 737, 954
BceAI	ACGGC	9 cut(s)	159, 187, 546, 548, 637, 688, 1060, 1235, 1281
BciT130I	CCWGG	6 cut(s)	602, 644, 709, 727, 808, 1370
BcnI	CCSGG	7 cut(s)	109, 506, 734, 765, 1010, 1117, 1209
BcoDI	GTCTC	2 cut(s)	563, 1376
BfoI	RGCGCY	1 cut(s)	518
BisI	GCNGC	7 cut(s)	47, 92, 358, 721, 751, 943, 1024
BlpI	GCTNAGC	1 cut(s)	632
BlsI	GCNGC	7 cut(s)	48, 93, 359, 722, 752, 944, 1025
BmcAI	AGTACT	1 cut(s)	575
Bme18I	GGWCC	7 cut(s)	447, 604, 640, 646, 730, 1029, 1176
BmgBI	CACGTC	1 cut(s)	1050
BmgT120I	GGNCC	9 cut(s)	48, 447, 604, 640, 646, 697, 730, 1029, 1176
BmsI	GCATC	3 cut(s)	618, 759, 853
BplI	GAGNNNNNCTC	2 cut(s)	986, 1018
BpmI	CTGGAG	2 cut(s)	709, 1076
Bpu1102I	GCTNAGC	1 cut(s)	632
BpuEI	CTTGAG	1 cut(s)	71
BpuMI	CCSGG	7 cut(s)	109, 506, 734, 765, 1010, 1117, 1209
Bsa29I	ATCGAT	1 cut(s)	1335
BsaHI	GRCGYC	3 cut(s)	515, 822, 870
BsaI	GGTCTC	1 cut(s)	563
BsaWI	WCCGGW	5 cut(s)	13, 842, 900, 1216, 1242
BsaXI	ACNNNNNCTCC	2 cut(s)	123, 153
Bse118I	RCCGGY	4 cut(s)	28, 391, 1145, 1289
Bse1I	ACTGG	3 cut(s)	449, 454, 1189
Bse3DI	GCAATG	1 cut(s)	1404
BseAI	TCCGGA	1 cut(s)	13
BseBI	CCWGG	6 cut(s)	602, 644, 709, 727, 808, 1370
BseCI	ATCGAT	1 cut(s)	1335
BseGI	GGATG	3 cut(s)	96, 540, 774
BseMI	GCAATG	1 cut(s)	1404
BseMII	CTCAG	4 cut(s)	91, 623, 968, 1242
BseNI	ACTGG	3 cut(s)	449, 454, 1189
BseRI	GAGGAG	3 cut(s)	143, 779, 1441
BseXI	GCAGC	4 cut(s)	103, 344, 737, 954
BseYI	CCCAGC	2 cut(s)	636, 675
Bsh1236I	CGCG	6 cut(s)	355, 365, 609, 784, 929, 1181
Bsh1285I	CGRYCG	2 cut(s)	613, 1243
BshFI	GGCC	5 cut(s)	49, 128, 699, 1145, 1268
BshNI	GGYRCC	3 cut(s)	167, 415, 514
BshVI	ATCGAT	1 cut(s)	1335
BsiEI	CGRYCG	2 cut(s)	613, 1243
BsiHKAI	GWGCWC	2 cut(s)	353, 1287
BslFI	GGGAC	4 cut(s)	725, 743, 824, 1276
BsmAI	GTCTC	2 cut(s)	563, 1376
BsmBI	CGTCTC	1 cut(s)	1376
BsmFI	GGGAC	4 cut(s)	725, 743, 824, 1276
BsmI	GAATGC	1 cut(s)	266
BsnI	GGCC	5 cut(s)	49, 128, 699, 1145, 1268
Bso31I	GGTCTC	1 cut(s)	563
Bsp1286I	GDGCHC	3 cut(s)	353, 746, 1287
Bsp13I	TCCGGA	1 cut(s)	13
Bsp1407I	TGTACA	1 cut(s)	756
Bsp143I	GATC	8 cut(s)	221, 402, 486, 610, 665, 679, 702, 1152
Bsp1720I	GCTNAGC	1 cut(s)	632
Bsp19I	CCATGG	1 cut(s)	693
BspANI	GGCC	5 cut(s)	49, 128, 699, 1145, 1268
BspCNI	CTCAG	4 cut(s)	90, 624, 969, 1241
BspDI	ATCGAT	1 cut(s)	1335
BspEI	TCCGGA	1 cut(s)	13
BspFNI	CGCG	6 cut(s)	355, 365, 609, 784, 929, 1181
BspPI	GGATC	7 cut(s)	229, 410, 494, 660, 687, 710, 1147
BspQI	GCTCTTC	1 cut(s)	923
BspT107I	GGYRCC	3 cut(s)	167, 415, 514
BspTNI	GGTCTC	1 cut(s)	563
BsrBI	CCGCTC	2 cut(s)	723, 799
BsrDI	GCAATG	1 cut(s)	1404
BsrFI	RCCGGY	4 cut(s)	28, 391, 1145, 1289
BsrGI	TGTACA	1 cut(s)	756
BsrI	ACTGG	3 cut(s)	449, 454, 1189
BssAI	RCCGGY	4 cut(s)	28, 391, 1145, 1289
BssMI	GATC	8 cut(s)	221, 402, 486, 610, 665, 679, 702, 1152
BssNI	GRCGYC	3 cut(s)	515, 822, 870
BssSI	CACGAG	1 cut(s)	1003
BssT1I	CCWWGG	1 cut(s)	693
Bst2BI	CACGAG	1 cut(s)	1003
Bst2UI	CCWGG	6 cut(s)	602, 644, 709, 727, 808, 1370
Bst4CI	ACNGT	4 cut(s)	24, 972, 1298, 1387
Bst6I	CTCTTC	2 cut(s)	923, 1299
BstACI	GRCGYC	3 cut(s)	515, 822, 870
BstAUI	TGTACA	1 cut(s)	756
BstC8I	GCNNGC	5 cut(s)	83, 353, 369, 393, 1287
BstDEI	CTNAG	4 cut(s)	77, 632, 977, 1228
BstDSI	CCRYGG	3 cut(s)	344, 528, 693
BstF5I	GGATG	3 cut(s)	96, 540, 774
BstFNI	CGCG	6 cut(s)	355, 365, 609, 784, 929, 1181
BstH2I	RGCGCY	1 cut(s)	518
BstHHI	GCGC	5 cut(s)	357, 367, 517, 786, 942
BstKTI	GATC	8 cut(s)	224, 405, 489, 613, 668, 682, 705, 1155
BstMAI	GTCTC	2 cut(s)	563, 1376
BstMBI	GATC	8 cut(s)	221, 402, 486, 610, 665, 679, 702, 1152
BstMCI	CGRYCG	2 cut(s)	613, 1243
BstMWI	GCNNNNNNNGC	5 cut(s)	91, 357, 750, 769, 1044
BstNI	CCWGG	6 cut(s)	602, 644, 709, 727, 808, 1370
BstNSI	RCATGY	1 cut(s)	757
BstUI	CGCG	6 cut(s)	355, 365, 609, 784, 929, 1181
BstV1I	GCAGC	4 cut(s)	103, 344, 737, 954
BstX2I	RGATCY	1 cut(s)	665
BstYI	RGATCY	1 cut(s)	665
Bsu15I	ATCGAT	1 cut(s)	1335
BsuRI	GGCC	5 cut(s)	49, 128, 699, 1145, 1268
BsuTUI	ATCGAT	1 cut(s)	1335
BtgI	CCRYGG	3 cut(s)	344, 528, 693
BtrI	CACGTC	1 cut(s)	1050
BtsCI	GGATG	3 cut(s)	96, 540, 774
BtsI	GCAGTG	2 cut(s)	616, 982
BtsIMutI	CAGTG	2 cut(s)	616, 982
Cac8I	GCNNGC	5 cut(s)	83, 353, 369, 393, 1287
CfoI	GCGC	5 cut(s)	357, 367, 517, 786, 942
Cfr10I	RCCGGY	4 cut(s)	28, 391, 1145, 1289
Cfr13I	GGNCC	9 cut(s)	48, 447, 604, 640, 646, 697, 730, 1029, 1176
ClaI	ATCGAT	1 cut(s)	1335
CpoI	CGGWCCG	1 cut(s)	1176
CseI	GACGC	2 cut(s)	371, 1403
Csp6I	GTAC	6 cut(s)	32, 442, 574, 655, 757, 1192
CspCI	CAANNNNNGTGG	2 cut(s)	1430, 1465
CspI	CGGWCCG	1 cut(s)	1176
CviAII	CATG	7 cut(s)	114, 124, 490, 511, 694, 754, 1138
CviQI	GTAC	6 cut(s)	32, 442, 574, 655, 757, 1192
DdeI	CTNAG	4 cut(s)	77, 632, 977, 1228
DinI	GGCGCC	1 cut(s)	516
DpnI	GATC	8 cut(s)	223, 404, 488, 612, 667, 681, 704, 1154
DpnII	GATC	8 cut(s)	221, 402, 486, 610, 665, 679, 702, 1152
DraIII	CACNNNGTG	1 cut(s)	879
EaeI	YGGCCR	2 cut(s)	126, 1143
Eam1104I	CTCTTC	2 cut(s)	923, 1299
EarI	CTCTTC	2 cut(s)	923, 1299
EciI	GGCGGA	2 cut(s)	189, 707
Ecl136II	GAGCTC	1 cut(s)	351
Eco130I	CCWWGG	1 cut(s)	693
Eco24I	GRGCYC	2 cut(s)	353, 746
Eco31I	GGTCTC	1 cut(s)	563
Eco47I	GGWCC	7 cut(s)	447, 604, 640, 646, 730, 1029, 1176
Eco53kI	GAGCTC	1 cut(s)	351
EcoICRI	GAGCTC	1 cut(s)	351
EcoO109I	RGGNCCY	1 cut(s)	730
EcoRII	CCWGG	6 cut(s)	600, 642, 707, 725, 806, 1368
EcoT14I	CCWWGG	1 cut(s)	693
EcoT38I	GRGCYC	2 cut(s)	353, 746
EgeI	GGCGCC	1 cut(s)	516
EheI	GGCGCC	1 cut(s)	516
ErhI	CCWWGG	1 cut(s)	693
Esp3I	CGTCTC	1 cut(s)	1376
FaeI	CATG	7 cut(s)	117, 127, 493, 514, 697, 757, 1141
FaqI	GGGAC	4 cut(s)	725, 743, 824, 1276
FatI	CATG	7 cut(s)	113, 123, 489, 510, 693, 753, 1137
FauI	CCCGC	5 cut(s)	179, 191, 922, 1019, 1314
FblI	GTMKAC	1 cut(s)	285
Fnu4HI	GCNGC	7 cut(s)	47, 92, 358, 721, 751, 943, 1024
FokI	GGATG	3 cut(s)	83, 527, 781
FriOI	GRGCYC	2 cut(s)	353, 746
Fsp4HI	GCNGC	7 cut(s)	47, 92, 358, 721, 751, 943, 1024
GlaI	GCGC	5 cut(s)	356, 366, 516, 785, 941
GluI	GCNGC	7 cut(s)	47, 92, 358, 721, 751, 943, 1024
GsaI	CCCAGC	2 cut(s)	640, 679
GsuI	CTGGAG	2 cut(s)	709, 1076
HaeII	RGCGCY	1 cut(s)	518
HaeIII	GGCC	5 cut(s)	49, 128, 699, 1145, 1268
HgaI	GACGC	2 cut(s)	371, 1403
HhaI	GCGC	5 cut(s)	357, 367, 517, 786, 942
Hin1I	GRCGYC	3 cut(s)	515, 822, 870
Hin1II	CATG	7 cut(s)	117, 127, 493, 514, 697, 757, 1141
Hin6I	GCGC	5 cut(s)	355, 365, 515, 784, 940
HinP1I	GCGC	5 cut(s)	355, 365, 515, 784, 940
HinfI	GANTC	8 cut(s)	316, 424, 846, 979, 995, 1001, 1057, 1076
HphI	GGTGA	5 cut(s)	481, 682, 697, 1105, 1321
Hpy166II	GTNNAC	2 cut(s)	286, 1018
Hpy188I	TCNGA	7 cut(s)	466, 486, 670, 965, 1000, 1081, 1347
Hpy8I	GTNNAC	2 cut(s)	286, 1018
Hpy99I	CGWCG	8 cut(s)	365, 380, 557, 569, 674, 824, 827, 1054
HpyAV	CCTTC	4 cut(s)	242, 556, 1367, 1409
HpyCH4III	ACNGT	4 cut(s)	24, 972, 1298, 1387
HpyCH4IV	ACGT	6 cut(s)	552, 822, 870, 1049, 1067, 1281
HpyCH4V	TGCA	4 cut(s)	493, 753, 1137, 1361
HpyF10VI	GCNNNNNNNGC	5 cut(s)	91, 357, 750, 769, 1044
HpyF3I	CTNAG	4 cut(s)	77, 632, 977, 1228
HpySE526I	ACGT	6 cut(s)	552, 822, 870, 1049, 1067, 1281
Hsp92I	GRCGYC	3 cut(s)	515, 822, 870
Hsp92II	CATG	7 cut(s)	117, 127, 493, 514, 697, 757, 1141
HspAI	GCGC	5 cut(s)	355, 365, 515, 784, 940
KasI	GGCGCC	1 cut(s)	514
KflI	GGGWCCC	1 cut(s)	730
Kpn2I	TCCGGA	1 cut(s)	13
KroI	GCCGGC	1 cut(s)	391
KroNI	GCCGGC	1 cut(s)	393
Kzo9I	GATC	8 cut(s)	221, 402, 486, 610, 665, 679, 702, 1152
LguI	GCTCTTC	1 cut(s)	923
LmnI	GCTCC	7 cut(s)	348, 436, 728, 749, 932, 1043, 1438
Lsp1109I	GCAGC	4 cut(s)	103, 344, 737, 954
LweI	GCATC	3 cut(s)	618, 759, 853
MaeII	ACGT	6 cut(s)	552, 822, 870, 1049, 1067, 1281
MaeIII	GTNAC	7 cut(s)	773, 871, 892, 972, 980, 1223, 1292
MalI	GATC	8 cut(s)	223, 404, 488, 612, 667, 681, 704, 1154
MbiI	CCGCTC	2 cut(s)	723, 799
MboI	GATC	8 cut(s)	221, 402, 486, 610, 665, 679, 702, 1152
MboII	GAAGA	3 cut(s)	260, 910, 1316
MflI	RGATCY	1 cut(s)	665
MhlI	GDGCHC	3 cut(s)	353, 746, 1287
MlsI	TGGCCA	1 cut(s)	128
MluCI	AATT	1 cut(s)	1348
MluNI	TGGCCA	1 cut(s)	128
Mly113I	GGCGCC	1 cut(s)	515
MlyI	GAGTC	4 cut(s)	988, 995, 1004, 1070
MmeI	TCCRAC	5 cut(s)	61, 693, 978, 1065, 1359
Mox20I	TGGCCA	1 cut(s)	128
MroI	TCCGGA	1 cut(s)	13
MroNI	GCCGGC	1 cut(s)	391
MroXI	GAANNNNTTC	2 cut(s)	959, 1068
MscI	TGGCCA	1 cut(s)	128
MslI	CAYNNNNRTG	1 cut(s)	692
Msp20I	TGGCCA	1 cut(s)	128
Mva1269I	GAATGC	1 cut(s)	266
MvaI	CCWGG	6 cut(s)	602, 644, 709, 727, 808, 1370
MvnI	CGCG	6 cut(s)	355, 365, 609, 784, 929, 1181
MwoI	GCNNNNNNNGC	5 cut(s)	91, 357, 750, 769, 1044
NaeI	GCCGGC	1 cut(s)	393
NarI	GGCGCC	1 cut(s)	515
NciI	CCSGG	7 cut(s)	109, 506, 734, 765, 1010, 1117, 1209
NcoI	CCATGG	1 cut(s)	693
NdeII	GATC	8 cut(s)	221, 402, 486, 610, 665, 679, 702, 1152
NgoMIV	GCCGGC	1 cut(s)	391
NlaIII	CATG	7 cut(s)	117, 127, 493, 514, 697, 757, 1141
NmeAIII	GCCGAG	2 cut(s)	144, 1122
NmuCI	GTSAC	3 cut(s)	871, 892, 980
NspI	RCATGY	1 cut(s)	757
PasI	CCCWGGG	1 cut(s)	807
PciSI	GCTCTTC	1 cut(s)	923
PcsI	WCGNNNNNNNCGW	1 cut(s)	561
PctI	GAATGC	1 cut(s)	266
PdiI	GCCGGC	1 cut(s)	393
PdmI	GAANNNNTTC	2 cut(s)	959, 1068
PfeI	GAWTC	4 cut(s)	316, 424, 846, 1057
PfoI	TCCNGGA	1 cut(s)	642
PkrI	GCNGC	7 cut(s)	48, 93, 359, 722, 752, 944, 1025
Ple19I	CGATCG	1 cut(s)	613
PleI	GAGTC	4 cut(s)	987, 995, 1003, 1070
PluTI	GGCGCC	1 cut(s)	518
PpsI	GAGTC	4 cut(s)	987, 995, 1003, 1070
PpuMI	RGGWCCY	1 cut(s)	730
Psp124BI	GAGCTC	1 cut(s)	353
Psp1406I	AACGTT	1 cut(s)	1067
Psp5II	RGGWCCY	1 cut(s)	730
Psp6I	CCWGG	6 cut(s)	600, 642, 707, 725, 806, 1368
PspFI	CCCAGC	2 cut(s)	636, 675
PspGI	CCWGG	6 cut(s)	600, 642, 707, 725, 806, 1368
PspPI	GGNCC	9 cut(s)	48, 447, 604, 640, 646, 697, 730, 1029, 1176
PspPPI	RGGWCCY	1 cut(s)	730
PsuI	RGATCY	1 cut(s)	665
PvuI	CGATCG	1 cut(s)	613
RgaI	GCGATCGC	1 cut(s)	613
RsaI	GTAC	6 cut(s)	33, 443, 575, 656, 758, 1193
RsaNI	GTAC	6 cut(s)	32, 442, 574, 655, 757, 1192
RseI	CAYNNNNRTG	1 cut(s)	692
Rsr2I	CGGWCCG	1 cut(s)	1176
RsrII	CGGWCCG	1 cut(s)	1176
SacI	GAGCTC	1 cut(s)	353
SapI	GCTCTTC	1 cut(s)	923
SatI	GCNGC	7 cut(s)	47, 92, 358, 721, 751, 943, 1024
Sau3AI	GATC	8 cut(s)	221, 402, 486, 610, 665, 679, 702, 1152
Sau96I	GGNCC	9 cut(s)	48, 447, 604, 640, 646, 697, 730, 1029, 1176
ScaI	AGTACT	1 cut(s)	575
SchI	GAGTC	4 cut(s)	988, 995, 1004, 1070
SduI	GDGCHC	3 cut(s)	353, 746, 1287
SfaAI	GCGATCGC	1 cut(s)	613
SfaNI	GCATC	3 cut(s)	618, 759, 853
SfoI	GGCGCC	1 cut(s)	516
SgfI	GCGATCGC	1 cut(s)	613
SinI	GGWCC	7 cut(s)	447, 604, 640, 646, 730, 1029, 1176
SmiMI	CAYNNNNRTG	1 cut(s)	692
SmlI	CTYRAG	1 cut(s)	86
SmoI	CTYRAG	1 cut(s)	86
Sse9I	AATT	1 cut(s)	1348
SspDI	GGCGCC	1 cut(s)	514
SstI	GAGCTC	1 cut(s)	353
StyI	CCWWGG	1 cut(s)	693
TaaI	ACNGT	4 cut(s)	24, 972, 1298, 1387
TaiI	ACGT	6 cut(s)	555, 825, 873, 1052, 1070, 1284
TaqII	GACCGA	3 cut(s)	374, 464, 545
TasI	AATT	1 cut(s)	1348
TatI	WGTACW	2 cut(s)	573, 756
TauI	GCSGC	3 cut(s)	49, 723, 1026
TfiI	GAWTC	4 cut(s)	316, 424, 846, 1057
TscAI	CASTG	2 cut(s)	623, 989
TseFI	GTSAC	3 cut(s)	871, 892, 980
TseI	GCWGC	4 cut(s)	91, 357, 750, 942
Tsp45I	GTSAC	3 cut(s)	871, 892, 980
TspDTI	ATGAA	2 cut(s)	676, 1225
TspGWI	ACGGA	1 cut(s)	333
TspRI	CASTG	2 cut(s)	623, 989
VpaK11BI	GGWCC	7 cut(s)	447, 604, 640, 646, 730, 1029, 1176
XapI	RAATTY	1 cut(s)	1348
XceI	RCATGY	1 cut(s)	757
XmiI	GTMKAC	1 cut(s)	285
XmnI	GAANNNNTTC	2 cut(s)	959, 1068
ZraI	GACGTC	2 cut(s)	823, 871
ZrmI	AGTACT	1 cut(s)	575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.