Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g47542 |
| pyrus_communis | pycom03g14340 |
| rosa_laevigata | RLG00000021637 |
| rosa_roxburghii | Rroxscaffold_2G00084690 |
| rosa_samantha | Rh2AG590700 Rh2DG613500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 275 |
| AclWI | GGATC | 2 cut(s) | 377, 382 |
| AluBI | AGCT | 1 cut(s) | 107 |
| AluI | AGCT | 1 cut(s) | 107 |
| AlwI | GGATC | 2 cut(s) | 377, 382 |
| AoxI | GGCC | 1 cut(s) | 302 |
| ApeKI | GCWGC | 1 cut(s) | 55 |
| AspLEI | GCGC | 1 cut(s) | 44 |
| AsuHPI | GGTGA | 2 cut(s) | 186, 331 |
| BbvI | GCAGC | 1 cut(s) | 67 |
| BccI | CCATC | 2 cut(s) | 124, 329 |
| BclI | TGATCA | 1 cut(s) | 286 |
| BfaI | CTAG | 2 cut(s) | 222, 360 |
| BisI | GCNGC | 1 cut(s) | 56 |
| BlsI | GCNGC | 1 cut(s) | 57 |
| Bpu10I | CCTNAGC | 1 cut(s) | 263 |
| Bse3DI | GCAATG | 1 cut(s) | 126 |
| BseGI | GGATG | 1 cut(s) | 340 |
| BseMI | GCAATG | 1 cut(s) | 126 |
| BseXI | GCAGC | 1 cut(s) | 67 |
| BshFI | GGCC | 1 cut(s) | 304 |
| BsnI | GGCC | 1 cut(s) | 304 |
| Bsp143I | GATC | 3 cut(s) | 286, 369, 374 |
| BspACI | CCGC | 1 cut(s) | 275 |
| BspANI | GGCC | 1 cut(s) | 304 |
| BspHI | TCATGA | 1 cut(s) | 126 |
| BspPI | GGATC | 2 cut(s) | 377, 382 |
| BsrDI | GCAATG | 1 cut(s) | 126 |
| BssMI | GATC | 3 cut(s) | 286, 369, 374 |
| Bst4CI | ACNGT | 1 cut(s) | 114 |
| Bst6I | CTCTTC | 1 cut(s) | 171 |
| BstC8I | GCNNGC | 2 cut(s) | 46, 105 |
| BstDEI | CTNAG | 1 cut(s) | 263 |
| BstF5I | GGATG | 1 cut(s) | 340 |
| BstHHI | GCGC | 1 cut(s) | 44 |
| BstKTI | GATC | 3 cut(s) | 289, 372, 377 |
| BstMBI | GATC | 3 cut(s) | 286, 369, 374 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 41, 218 |
| BstNSI | RCATGY | 1 cut(s) | 29 |
| BstV1I | GCAGC | 1 cut(s) | 67 |
| BstX2I | RGATCY | 1 cut(s) | 374 |
| BstYI | RGATCY | 1 cut(s) | 374 |
| BsuRI | GGCC | 1 cut(s) | 304 |
| BtsCI | GGATG | 1 cut(s) | 340 |
| Cac8I | GCNNGC | 2 cut(s) | 46, 105 |
| CciI | TCATGA | 1 cut(s) | 126 |
| CfoI | GCGC | 1 cut(s) | 44 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 278, 313 |
| CviAII | CATG | 3 cut(s) | 26, 127, 228 |
| CviJI | RGCY | 7 cut(s) | 35, 58, 107, 250, 267, 304, 341 |
| CviKI_1 | RGCY | 7 cut(s) | 35, 58, 107, 250, 267, 304, 341 |
| DdeI | CTNAG | 1 cut(s) | 263 |
| DpnI | GATC | 3 cut(s) | 288, 371, 376 |
| DpnII | GATC | 3 cut(s) | 286, 369, 374 |
| Eam1104I | CTCTTC | 1 cut(s) | 171 |
| EarI | CTCTTC | 1 cut(s) | 171 |
| FaeI | CATG | 3 cut(s) | 29, 130, 231 |
| FaiI | YATR | 4 cut(s) | 27, 40, 128, 229 |
| FatI | CATG | 3 cut(s) | 25, 126, 227 |
| FbaI | TGATCA | 1 cut(s) | 286 |
| Fnu4HI | GCNGC | 1 cut(s) | 56 |
| FokI | GGATG | 1 cut(s) | 347 |
| Fsp4HI | GCNGC | 1 cut(s) | 56 |
| FspBI | CTAG | 2 cut(s) | 222, 360 |
| GlaI | GCGC | 1 cut(s) | 43 |
| GluI | GCNGC | 1 cut(s) | 56 |
| HaeIII | GGCC | 1 cut(s) | 304 |
| HhaI | GCGC | 1 cut(s) | 44 |
| Hin1II | CATG | 3 cut(s) | 29, 130, 231 |
| Hin6I | GCGC | 1 cut(s) | 42 |
| HinP1I | GCGC | 1 cut(s) | 42 |
| HinfI | GANTC | 2 cut(s) | 188, 386 |
| HphI | GGTGA | 2 cut(s) | 186, 331 |
| Hpy188I | TCNGA | 3 cut(s) | 94, 374, 381 |
| Hpy188III | TCNNGA | 3 cut(s) | 127, 148, 393 |
| HpyAV | CCTTC | 1 cut(s) | 316 |
| HpyCH4III | ACNGT | 1 cut(s) | 114 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 55, 119 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 41, 218 |
| HpyF3I | CTNAG | 1 cut(s) | 263 |
| Hsp92II | CATG | 3 cut(s) | 29, 130, 231 |
| HspAI | GCGC | 1 cut(s) | 42 |
| Ksp22I | TGATCA | 1 cut(s) | 286 |
| Kzo9I | GATC | 3 cut(s) | 286, 369, 374 |
| LpnPI | CCDG | 4 cut(s) | 117, 133, 198, 297 |
| Lsp1109I | GCAGC | 1 cut(s) | 67 |
| MaeI | CTAG | 2 cut(s) | 222, 360 |
| MalI | GATC | 3 cut(s) | 288, 371, 376 |
| MboI | GATC | 3 cut(s) | 286, 369, 374 |
| MboII | GAAGA | 3 cut(s) | 158, 248, 381 |
| MflI | RGATCY | 1 cut(s) | 374 |
| MlyI | GAGTC | 1 cut(s) | 197 |
| MnlI | CCTC | 3 cut(s) | 96, 294, 359 |
| MseI | TTAA | 4 cut(s) | 69, 245, 270, 327 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 41, 218 |
| NdeII | GATC | 3 cut(s) | 286, 369, 374 |
| NlaIII | CATG | 3 cut(s) | 29, 130, 231 |
| NspI | RCATGY | 1 cut(s) | 29 |
| PagI | TCATGA | 1 cut(s) | 126 |
| PfeI | GAWTC | 1 cut(s) | 386 |
| PkrI | GCNGC | 1 cut(s) | 57 |
| PleI | GAGTC | 1 cut(s) | 196 |
| PpsI | GAGTC | 1 cut(s) | 196 |
| PsuI | RGATCY | 1 cut(s) | 374 |
| SaqAI | TTAA | 4 cut(s) | 69, 245, 270, 327 |
| SatI | GCNGC | 1 cut(s) | 56 |
| Sau3AI | GATC | 3 cut(s) | 286, 369, 374 |
| SchI | GAGTC | 1 cut(s) | 197 |
| SetI | ASST | 6 cut(s) | 88, 101, 109, 184, 264, 327 |
| SsiI | CCGC | 1 cut(s) | 275 |
| SspI | AATATT | 1 cut(s) | 242 |
| SspMI | CTAG | 2 cut(s) | 222, 360 |
| TaaI | ACNGT | 1 cut(s) | 114 |
| TaqI | TCGA | 1 cut(s) | 345 |
| TfiI | GAWTC | 1 cut(s) | 386 |
| Tru1I | TTAA | 4 cut(s) | 69, 245, 270, 327 |
| Tru9I | TTAA | 4 cut(s) | 69, 245, 270, 327 |
| TseI | GCWGC | 1 cut(s) | 55 |
| XceI | RCATGY | 1 cut(s) | 29 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 312 |
| XspI | CTAG | 2 cut(s) | 222, 360 |